setup.py

#!/usr/bin/env python
# -*- coding: utf-8 -*-

"""The setup script."""

from setuptools import setup, find_packages

with open("README.rst") as readme_file:
    readme = readme_file.read()

with open("HISTORY.rst") as history_file:
    history = history_file.read()

test_requirements = ["codecov", "flake8", "pytest", "pytest-cov", "pytest-raises"]

setup_requirements = ["pytest-runner"]

dev_requirements = [
    "bumpversion>=0.5.3",
    "wheel>=0.33.1",
    "flake8>=3.7.7",
    "tox>=3.5.2",
    "coverage>=5.0a4",
    "Sphinx>=2.0.0b1",
    "sphinx_rtd_theme>=0.3.1",
    "recommonmark>=0.5.0",
    "twine>=1.13.0",
    "pytest>=4.3.0",
    "pytest-cov==2.6.1",
    "pytest-raises>=0.10",
    "pytest-runner>=4.4",
]

interactive_requirements = ["altair", "jupyterlab", "matplotlib"]

with open("requirements.txt", "r") as f:
    requirements = f.read().splitlines()

extra_requirements = {
    "test": test_requirements,
    "setup": setup_requirements,
    "dev": dev_requirements,
    "interactive": interactive_requirements,
    "all": [
        *requirements,
        *test_requirements,
        *setup_requirements,
        *dev_requirements,
        *interactive_requirements,
    ],
}

setup(
    author="Ritvik Vasan",
    author_email="rvasan@eng.ucsd.edu",
    classifiers=[
        "Development Status :: 2 - Pre-Alpha",
        "Intended Audience :: Developers",
        "License :: Allen Institute Software License",
        "Natural Language :: English",
        "Programming Language :: Python :: 3.6",
        "Programming Language :: Python :: 3.7",
    ],
    description="A research testbed for conditional variational autoencoders",
    entry_points={
        "console_scripts": ["CVAE_train=CVAE_testbed.bin.CVAE_train:train_model"]
    },
    install_requires=requirements,
    license="Allen Institute Software License",
    long_description=readme + "\n\n" + history,
    include_package_data=True,
    keywords="CVAE_testbed",
    name="CVAE_testbed",
    packages=find_packages(),
    python_requires=">=3.6",
    setup_requires=setup_requirements,
    test_suite="CVAE_testbed/CVAE_testbed/tests",
    tests_require=test_requirements,
    extras_require=extra_requirements,
    url="https://github.com/AllenCellModeling/CVAE_testbed",
    version="0.1.0",
    zip_safe=False,
)