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models.py
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import os
from django.db import models
from django import forms
from django.utils.encoding import python_2_unicode_compatible
from django.utils.translation import ugettext_lazy as _
from mptt.models import MPTTModel
from mptt.fields import TreeForeignKey, TreeManyToManyField
from django.utils.timezone import now as timezone_now
#from iSkyLIMS_wetlab.models import RunProcess, Projects
from django_utils.models import Profile,Center
from django.contrib.auth.models import User
STATUS_CHOICES = (
('recorded',_("Recorded")),
('approved',_("Approved")),
('rejected',_("Rejected")),
('queued',_("Queued")),
('in_progress',_('In progress')),
('delivered',_("Delivered")),
('archived',_("Archived"))
)
def service_files_upload(instance,filename):
now = timezone_now()
filename_base,filename_ext = os.path.splitext(filename)
return 'iSkyLIMS_drylab/servicesRequest/%s_%s%s' % (
now.strftime("%Y%m%d%H%M%S"),
filename_base.lower(),
filename_ext.lower(),
)
# Create your models here.
class FileExt(models.Model):
fileExt=models.CharField(_("File extension"),max_length=10)
def __str__ (self):
return '%s' %(self.fileExt)
class Platform(models.Model):
platformName=models.CharField(_("Sequencing platform"),max_length=20)
def __str__ (self):
return '%s' %(self.platformName)
def get_platform_name(self):
return '%s' %(self.platformName)
class Machines (models.Model) :
platformID = models.ForeignKey(Platform ,on_delete=models.CASCADE)
machineName = models.CharField(_("Machine Name"),max_length=255)
machineDescription = models.CharField(_("Description"),max_length=255,null=True,blank=True)
machineLocation = models.CharField(_("Location"),max_length=255,null=True,blank=True)
machineProvider = models.CharField(_("Machine owner brand"),max_length=255,null=True,blank=True)
machineSerialNumber = models.CharField(_("Serial Number"),max_length=255,null=True,blank=True)
machineState = models.CharField(_("Machine State"),max_length=50,null=True,blank=True)
machineOperationStart = models.DateField(auto_now_add=False, null=True,blank=True)
machineOperationEnd = models.DateField(auto_now_add=False, null=True,blank=True)
machineNumberLanes = models.CharField("Number of Lanes", max_length= 5)
def __str__ (self) :
return '%s' %(self.machineName)
def get_machine_name(self):
return '%s' %(self.machineName)
def get_number_of_lanes(self):
return '%s' %(self.machineNumberLanes)
class AvailableService(MPTTModel):
availServiceDescription=models.CharField(_("Available services"),max_length=100)
parent=TreeForeignKey('self',models.SET_NULL,null=True,blank=True)
def __str__(self):
return '%s' %(self.availServiceDescription)
class Meta:
ordering = ["tree_id","lft"]
verbose_name = ("AvailableService")
verbose_name_plural = ("AvailableServices")
class Service(models.Model):
## User requesting service:
# 'serviceUsername' refactored to 'serviceUserid' which shows better its true nature
# decision taken to change Foreign Key from 'Profile' to 'User' until full develop of "user registration"
serviceUserId=models.ForeignKey(User ,on_delete=models.CASCADE, null=True)
serviceSeqCenter=models.CharField(_("Sequencing center"),max_length=50,blank=False,null=True)
serviceRequestNumber=models.CharField(max_length=80, null=True)
serviceRequestInt=models.CharField(max_length=80, null=True)
## 'serviceRunID' is not used in forms.py/serviceRequestForm() or rest of code
## Addition of member 'serviceProjectNames' to support
# implementation of drop down menu to choose a project name of a list of projects
# belonging to the logged-in user in the service request form
serviceProjectNames=models.ManyToManyField('iSkyLIMS_wetlab.Projects',verbose_name=_("User's projects"),blank=True)
servicePlatform=models.ForeignKey(Platform ,on_delete=models.CASCADE , verbose_name=_("Sequencing platform"),blank=True,null=True)
serviceRunSpecs=models.CharField(_("Run specifications"),max_length=10,blank=True,null=True)
serviceFileExt=models.ForeignKey(FileExt ,on_delete=models.CASCADE ,verbose_name=_("File extension"),blank=True,null=True)
serviceAvailableService=TreeManyToManyField(AvailableService,verbose_name=_("AvailableServices"))
serviceFile=models.FileField(_("Service description file"),upload_to=service_files_upload, null=True,blank=True)
serviceStatus=models.CharField(_("Service status"),max_length=15,choices=STATUS_CHOICES)
serviceNotes=models.TextField(_("Service Notes"),max_length=2048,null=True)
serviceCreatedOnDate= models.DateField(auto_now_add=True,null=True)
#serviceCreatedOnDate= models.DateField(auto_now_add=False)
serviceOnApprovedDate = models.DateField(auto_now_add=False, null=True,blank=True)
serviceOnRejectedDate = models.DateField(auto_now_add=False, null=True,blank=True)
#serviceOnQueuedDate = models.DateField(auto_now_add=False, null=True)
#serviceOnInProgressDate = models.DateField(auto_now_add=False, null=True)
serviceOnDeliveredDate = models.DateField(auto_now_add=False, null=True)
#serviceOnArchivedDate = models.DateField(auto_now_add=False, null=True)
def __str__ (self):
return '%s' %(self.serviceRequestNumber)
def get_service_information (self):
platform = str(self.servicePlatform)
return '%s;%s;%s;%s' %(self.serviceRequestNumber ,self.serviceRunSpecs, self.serviceSeqCenter, platform)
def get_service_information_with_service_name (self):
platform = str(self.servicePlatform)
if Resolution.objects.filter(resolutionServiceID__exact = self).exists():
resolutions = Resolution.objects.filter(resolutionServiceID__exact = self).last()
folder_name = resolutions.resolutionFullNumber
if folder_name is None:
resolution_for_service = ''
else:
folder_name_split= folder_name.split('_')
resolution_for_service= '_'.join( folder_name_split[2:-1])
assigned_to = resolutions.resolutionAsignedUser
if assigned_to is None:
assigned_to = ''
else:
resolutions_for_service = ''
assigned_to = ''
if self.serviceOnApprovedDate is None:
approved_date = 'Not defined'
else:
approved_date = self.serviceOnApprovedDate.strftime("%d %B, %Y")
if resolutions.resolutionEstimatedDate is None:
estimated_date = 'Not defined'
else:
estimated_date = resolutions.resolutionEstimatedDate.strftime("%d %B, %Y")
return '%s;%s;%s;%s;%s;%s;%s;%s' %(self.serviceRequestNumber ,resolution_for_service , assigned_to, approved_date,
estimated_date, self.serviceRunSpecs, self.serviceSeqCenter, platform)
def get_service_dates (self):
service_dates =[]
service_dates.append(self.serviceCreatedOnDate.strftime("%d %B, %Y"))
if self.serviceOnApprovedDate is None:
if self.serviceStatus == 'rejected':
service_dates.append('--')
else:
service_dates.append('Approved Date not set')
else:
service_dates.append(self.serviceOnApprovedDate.strftime("%d %B, %Y"))
if self.serviceOnRejectedDate is None:
if self.serviceStatus != 'recorded':
service_dates.append('--')
else:
service_dates.append('Rejected Date not set')
else:
service_dates.append(self.serviceOnRejectedDate.strftime("%d %B, %Y"))
return service_dates
def get_stats_information (self):
stats_information =[]
stats_information.append(self.id)
stats_information.append(self.serviceRequestNumber)
stats_information.append(self.serviceStatus)
stats_information.append(self.serviceCreatedOnDate.strftime("%d %B, %Y"))
if self.serviceOnApprovedDate is None:
if self.serviceOnRejectedDate is None:
stats_information.append('--')
else:
stats_information.append(self.serviceOnRejectedDate.strftime("%d %B, %Y"))
else:
stats_information.append(self.serviceOnApprovedDate.strftime("%d %B, %Y"))
if self.serviceOnDeliveredDate is None:
stats_information.append('--')
else:
stats_information.append(self.serviceOnDeliveredDate.strftime("%d %B, %Y"))
return stats_information
def get_service_creation_time (self):
return self.serviceCreatedOnDate.strftime("%d %B, %Y")
def get_time_to_delivery (self):
if self.serviceOnDeliveredDate == self.serviceCreatedOnDate :
return 1
else:
number_days, time = str(self.serviceOnDeliveredDate - self.serviceCreatedOnDate).split(',')
number, string_value = number_days.split(' ')
return number
class Resolution(models.Model):
resolutionServiceID=models.ForeignKey(Service ,on_delete=models.CASCADE)
resolutionNumber=models.CharField(_("Resolutions name"),max_length=255,null=True)
#resolutionServiceSRV=models.CharField(_("Service identifier"),max_length=10)
resolutionEstimatedDate=models.DateField(_(" Estimated resolution date"), null = True,blank=False)
resolutionDate=models.DateField(_("Resolution date"),auto_now_add=True,blank=True)
#resolutionDate=models.DateField(_("Resolution date"),auto_now_add=False,blank=True)
resolutionOnQueuedDate = models.DateField(auto_now_add=False, null=True,blank=True)
resolutionOnInProgressDate = models.DateField(auto_now_add=False, null=True,blank=True)
resolutionNotes=models.TextField(_("Resolution notes"),max_length=1000, null=True)
resolutionFullNumber = models.CharField(_("Acronym Name"),max_length=255,null=True,blank=True)
resolutionAsignedUser = models.ForeignKey(User, related_name='groups+', on_delete=models.CASCADE, null=True,blank=True )
#resolutionAsignedUser = models.ForeignKey(User ,on_delete=models.CASCADE, null=True)
def __str__ (self):
return '%s' %(self.resolutionNumber)
def get_resolution_information (self):
resolution_info =[]
resolution_info.append(self.resolutionNumber)
resolution_info.append(self.resolutionFullNumber)
resolution_info.append(self.resolutionAsignedUser)
if self.resolutionEstimatedDate is not None:
resolution_info.append(self.resolutionEstimatedDate.strftime("%d %B, %Y"))
else:
resolution_info.append("Not defined yet")
if self.resolutionOnQueuedDate is not None:
resolution_info.append(self.resolutionOnQueuedDate.strftime("%d %B, %Y"))
else:
resolution_info.append("Not defined yet")
if self.resolutionOnInProgressDate is None:
resolution_info.append('--')
else:
resolution_info.append(self.resolutionOnInProgressDate.strftime("%d %B, %Y"))
resolution_info.append(self.resolutionNotes)
return resolution_info
class Delivery(models.Model):
deliveryResolutionID=models.ForeignKey(Resolution ,on_delete=models.CASCADE )
#deliveryResolutionID=models.OneToOneField(Resolution ,on_delete=models.CASCADE )
#deliveryNumber=models.IntegerField(_("Number of deliveries"))
#deliveryEstimatedDate=models.DateField(_("Delivery estimated date"))
deliveryDate=models.DateField(_("Delivery date"),auto_now_add=True,null=True,blank=True)
#deliveryDate=models.DateField(_("Delivery date"),auto_now_add=False,null=True,blank=True)
deliveryNotes=models.TextField(_("Delivery notes"),max_length=1000, null=True)
def __str__ (self):
return '%s' %(self.deliveryResolutionID)
def get_delivery_information (self):
delivery_info = []
delivery_info.append(self.deliveryResolutionID.resolutionNumber)
delivery_info.append(self.deliveryDate.strftime("%d %B, %Y"))
delivery_info.append(self.deliveryNotes)
return delivery_info