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cdms fails to load data on a specific level #446

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lee1043 opened this issue Sep 9, 2022 · 4 comments
Open

cdms fails to load data on a specific level #446

lee1043 opened this issue Sep 9, 2022 · 4 comments

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@lee1043
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lee1043 commented Sep 9, 2022

Describe the bug
Leaving this note for a record for those who may experience the similar problem. When opening a 3-dimensional variable that has plev as one of coordinates (such as ua, va, ta), it used to be possible to load the variable from one specific level (e.g., ua on 850 hPa). However, it looks like this capability has been broken, I think.

To Reproduce

import cdms2
infile = "/p/user_pub/pmp/pmp_results/pmp_v1.1.2/additional_xmls/latest/v20220903/cmip6/historical/atmos/mon/ua/cmip6.historical.ACCESS-CM2.r1i1p1f1.mon.ua.xml"
f = cdms2.open(infile)
d = f('ua', level=85000)

Expected behavior
Load variable at 850 hPa

Screenshots or traceback

---------------------------------------------------------------------------
IndexError                                Traceback (most recent call last)
Input In [11], in <cell line: 1>()
----> 1 d = f('ua', level=85000)

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/cdms2/cudsinterface.py:34, in cuDataset.__call__(self, id, *args, **kwargs)
     32     except (AttributeError, TypeError):
     33         raise CDMSError("No such variable, " + id)
---> 34 return v(*args, **kwargs)

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/cdms2/avariable.py:194, in AbstractVariable.__call__(self, *args, **kwargs)
    192 s = selectors.Selector(*args, **d)
    193 # get the selection
--> 194 return s.unmodified_select(self, raw=raw,
    195                            squeeze=squeeze,
    196                            order=order,
    197                            grid=grid)

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/cdms2/selectors.py:191, in Selector.unmodified_select(self, variable, raw, squeeze, order, grid)
    189 if _debug:
    190     print('About to call subRegion:', specifications)
--> 191 fetched = result.subRegion(*specifications)
    192 axismap = list(range(len(axes)))
    193 for c in components:

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/cdms2/avariable.py:969, in AbstractVariable.subRegion(self, *specs, **keys)
    962         slicelist = self.reg_specs2slices(speclist, force=circulardim)
    964     d = {'raw': raw,
    965          'squeeze': squeeze,
    966          'order': order,
    967          'grid': grid,
    968          }
--> 969     return self.subSlice(*slicelist, **d)
    971 #
    972 #  get the general wrap slice (indices that are neg -> pos and vica versa)
    973 #
    975 wrapslice = slicelist[wrapdim]

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/cdms2/avariable.py:732, in AbstractVariable.subSlice(self, *specs, **keys)
    730     singles = None
    731 slicelist = self.specs2slices(speclist, force=1)
--> 732 d = self.expertSlice(slicelist)
    733 squeeze = keys.get('squeeze', 0)
    734 raw = keys.get('raw', 0)

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/cdms2/variable.py:686, in DatasetVariable.expertSlice(self, initslist)
    683 # If slices with negative strides were input, apply the appropriate
    684 # reversals.
    685 if haveReversals:
--> 686     result = result[revlist]
    688 return result

File ~/.conda/envs/pmp_v2.4.0/lib/python3.10/site-packages/numpy/ma/core.py:3222, in MaskedArray.__getitem__(self, indx)
   3212 """
   3213 x.__getitem__(y) <==> x[y]
   3214 
   3215 Return the item described by i, as a masked array.
   3216 
   3217 """
   3218 # We could directly use ndarray.__getitem__ on self.
   3219 # But then we would have to modify __array_finalize__ to prevent the
   3220 # mask of being reshaped if it hasn't been set up properly yet
   3221 # So it's easier to stick to the current version
-> 3222 dout = self.data[indx]
   3223 _mask = self._mask
   3225 def _is_scalar(m):

IndexError: only integers, slices (`:`), ellipsis (`...`), numpy.newaxis (`None`) and integer or boolean arrays are valid indices

** Workaround **

level = 85000
deltaP = 1

d = f('ua', level=(level+deltaP, level-deltaP))
d.shape
(1980, 1, 145, 192)

Desktop (please complete the following information):

  • OS: Redhat
  • Version: cdms2, v3.1.5
(pmp_v2.4.0) [lee1043@gates test]$ conda list cdms2
# packages in environment at /home/lee1043/.conda/envs/pmp_v2.4.0:
#
# Name                    Version                   Build  Channel
cdms2                     3.1.5           py310h65abc81_14    conda-forge

Environment Information

`conda info`

     active environment : pmp_v2.4.0
    active env location : /home/lee1043/.conda/envs/pmp_v2.4.0
            shell level : 2
       user config file : /home/lee1043/.condarc
 populated config files : /home/lee1043/.condarc
          conda version : 4.14.0
    conda-build version : 3.18.8
         python version : 3.7.3.final.0
       virtual packages : __linux=3.10.0=0
                          __glibc=2.17=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /export/lee1043/anaconda3  (writable)
      conda av data dir : /export/lee1043/anaconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/lee1043/.conda/pkgs
       envs directories : /home/lee1043/.conda/envs
                          /export/lee1043/anaconda3/envs
               platform : linux-64
             user-agent : conda/4.14.0 requests/2.28.1 CPython/3.7.3 Linux/3.10.0-1160.71.1.el7.x86_64 rhel/7.9 glibc/2.17
                UID:GID : 55431:1026
             netrc file : None
           offline mode : False

`conda config --show-sources`

==> /home/lee1043/.condarc <==
envs_dirs:
  - /home/lee1043/.conda/envs
pkgs_dirs:
  - /home/lee1043/.conda/pkgs

`conda list --show-channel-urls`

_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
anyio                     3.6.1              pyhd8ed1ab_1    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py310h5764c6d_2    conda-forge
astroid                   2.11.7          py310h06a4308_0    defaults
asttokens                 2.0.8              pyhd8ed1ab_0    conda-forge
attrs                     22.1.0             pyh71513ae_1    conda-forge
babel                     2.10.3             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.11.1             pyha770c72_0    conda-forge
bleach                    5.0.1              pyhd8ed1ab_0    conda-forge
bokeh                     2.4.3              pyhd8ed1ab_3    conda-forge
brotli                    1.0.9                h166bdaf_7    conda-forge
brotli-bin                1.0.9                h166bdaf_7    conda-forge
brotlipy                  0.7.0           py310h5764c6d_1004    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
ca-certificates           2022.07.19           h06a4308_0    defaults
cartopy                   0.20.3          py310he7eef42_2    conda-forge
cdat_info                 8.2.1              pyhd8ed1ab_2    conda-forge
cdms2                     3.1.5           py310h65abc81_14    conda-forge
cdp                       1.7.0              pyhd8ed1ab_1    conda-forge
cdtime                    3.1.4           py310h1a17f1e_7    conda-forge
cdutil                    8.2.1              pyhd8ed1ab_1    conda-forge
certifi                   2022.6.15       py310h06a4308_0    defaults
cffi                      1.15.1          py310h255011f_0    conda-forge
charset-normalizer        2.1.1              pyhd8ed1ab_0    conda-forge
click                     8.1.3           py310hff52083_0    conda-forge
cloudpickle               2.1.0              pyhd8ed1ab_0    conda-forge
cryptography              37.0.4          py310h597c629_0    conda-forge
curl                      7.83.1               h7bff187_0    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
cytoolz                   0.12.0          py310h5764c6d_0    conda-forge
dask                      2022.8.1           pyhd8ed1ab_2    conda-forge
dask-core                 2022.8.1           pyhd8ed1ab_0    conda-forge
debugpy                   1.6.3           py310hd8f1fbe_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
dill                      0.3.4              pyhd3eb1b0_0    defaults
distarray                 2.12.2             pyhd8ed1ab_2    conda-forge
distributed               2022.8.1           pyhd8ed1ab_2    conda-forge
enso_metrics              1.1.1           py310hff52083_1    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
eofs                      1.4.0                      py_0    conda-forge
esmf                      8.2.0           nompi_h1ee4d8d_2    conda-forge
esmpy                     8.2.0           nompi_py310ha0140b2_1    conda-forge
executing                 0.10.0             pyhd8ed1ab_0    conda-forge
expat                     2.4.8                h27087fc_0    conda-forge
flit-core                 3.7.1              pyhd8ed1ab_0    conda-forge
fonttools                 4.37.1          py310h5764c6d_0    conda-forge
freeglut                  3.2.2                h9c3ff4c_1    conda-forge
freetype                  2.12.1               hca18f0e_0    conda-forge
fsspec                    2022.7.1           pyhd8ed1ab_0    conda-forge
future                    0.18.2          py310hff52083_5    conda-forge
g2clib                    1.6.3                heb9ad7a_1    conda-forge
genutil                   8.2.1           py310h96516ba_2    conda-forge
geos                      3.11.0               h27087fc_0    conda-forge
hdf4                      4.2.15               h9772cbc_4    conda-forge
hdf5                      1.12.2          nompi_h2386368_100    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
icu                       70.1                 h27087fc_0    conda-forge
idna                      3.3                pyhd8ed1ab_0    conda-forge
importlib-metadata        4.11.4          py310hff52083_0    conda-forge
importlib_metadata        4.11.4               hd8ed1ab_0    conda-forge
importlib_resources       5.9.0              pyhd8ed1ab_0    conda-forge
ipykernel                 6.15.1             pyh210e3f2_0    conda-forge
ipython                   8.4.0           py310hff52083_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
isort                     5.9.3              pyhd3eb1b0_0    defaults
jasper                    2.0.33               ha77e612_0    conda-forge
jedi                      0.18.1             pyhd8ed1ab_2    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonschema                4.14.0             pyhd8ed1ab_0    conda-forge
jupyter_client            7.3.4              pyhd8ed1ab_0    conda-forge
jupyter_core              4.11.1          py310hff52083_0    conda-forge
jupyter_server            1.18.1             pyhd8ed1ab_0    conda-forge
jupyterlab                3.4.5              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.15.1             pyhd8ed1ab_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.4           py310hbf28c38_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
lazy-object-proxy         1.7.1           py310h5764c6d_1    conda-forge
lcms2                     2.12                 hddcbb42_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libblas                   3.9.0           16_linux64_openblas    conda-forge
libbrotlicommon           1.0.9                h166bdaf_7    conda-forge
libbrotlidec              1.0.9                h166bdaf_7    conda-forge
libbrotlienc              1.0.9                h166bdaf_7    conda-forge
libcblas                  3.9.0           16_linux64_openblas    conda-forge
libcdms                   3.1.2              h2973bc7_118    conda-forge
libcf                     1.0.3           py310hbc577d2_114    conda-forge
libcurl                   7.83.1               h7bff187_0    conda-forge
libdeflate                1.13                 h166bdaf_0    conda-forge
libdrs                    3.1.2              hf593df3_118    conda-forge
libdrs_f                  3.1.2              h7e76ec7_114    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgfortran-ng            12.1.0              h69a702a_16    conda-forge
libgfortran5              12.1.0              hdcd56e2_16    conda-forge
libglu                    9.0.0             he1b5a44_1001    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libiconv                  1.16                 h516909a_0    conda-forge
liblapack                 3.9.0           16_linux64_openblas    conda-forge
libnetcdf                 4.8.1           nompi_h21705cb_104    conda-forge
libnghttp2                1.47.0               hdcd2b5c_1    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libopenblas               0.3.21          pthreads_h78a6416_2    conda-forge
libpng                    1.6.37               h753d276_4    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libsqlite                 3.39.2               h753d276_1    conda-forge
libssh2                   1.10.0               haa6b8db_3    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libtiff                   4.4.0                h0e0dad5_3    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libwebp-base              1.2.4                h166bdaf_0    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxml2                   2.9.14               h22db469_4    conda-forge
libxslt                   1.1.35               h8affb1d_0    conda-forge
libzip                    1.9.2                hc869a4a_1    conda-forge
libzlib                   1.2.12               h166bdaf_2    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lxml                      4.9.1           py310h5764c6d_0    conda-forge
lz4                       4.0.0           py310h5d5e884_2    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
markupsafe                2.1.1           py310h5764c6d_1    conda-forge
matplotlib-base           3.5.3           py310h8d5ebf3_2    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mccabe                    0.7.0              pyhd3eb1b0_0    defaults
mistune                   2.0.4              pyhd8ed1ab_0    conda-forge
msgpack-python            1.0.4           py310hbf28c38_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
nb_conda                  2.2.1                    unix_6    conda-forge
nb_conda_kernels          2.3.1           py310hff52083_1    conda-forge
nbclassic                 0.4.3              pyhd8ed1ab_0    conda-forge
nbclient                  0.6.7              pyhd8ed1ab_0    conda-forge
nbconvert                 7.0.0              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.0.0              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.0.0              pyhd8ed1ab_0    conda-forge
nbformat                  5.4.0              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
nest-asyncio              1.5.5              pyhd8ed1ab_0    conda-forge
netcdf-fortran            4.6.0           nompi_hc402ea5_100    conda-forge
notebook                  6.4.12             pyha770c72_0    conda-forge
notebook-shim             0.1.0              pyhd8ed1ab_0    conda-forge
numpy                     1.23.2          py310h53a5b5f_0    conda-forge
openblas                  0.3.21          pthreads_h320a7e8_2    conda-forge
openjpeg                  2.5.0                h7d73246_1    conda-forge
openssl                   1.1.1q               h7f8727e_0    defaults
output_viewer             1.3.3              pyhd8ed1ab_1    conda-forge
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pandas                    1.4.3           py310h769672d_0    conda-forge
pandoc                    2.19.2               ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.3.0              pyhd8ed1ab_0    conda-forge
patsy                     0.5.2              pyhd8ed1ab_0    conda-forge
pcmdi_metrics             2.4.0              pyhd8ed1ab_0    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.2.0           py310hbd86126_2    conda-forge
pip                       22.2.2             pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
platformdirs              2.4.0              pyhd3eb1b0_0    defaults
proj                      9.0.1                h93bde94_1    conda-forge
prometheus_client         0.14.1             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.30             pyha770c72_0    conda-forge
psutil                    5.9.1           py310h5764c6d_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pygments                  2.13.0             pyhd8ed1ab_0    conda-forge
pylint                    2.14.5          py310h06a4308_0    defaults
pyopenssl                 22.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyproj                    3.3.1           py310hf94497c_1    conda-forge
pyrsistent                0.18.1          py310h5764c6d_1    conda-forge
pyshp                     2.3.1              pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1           py310hff52083_5    conda-forge
python                    3.10.6          h582c2e5_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.1             pyhd8ed1ab_0    conda-forge
python_abi                3.10                    2_cp310    conda-forge
pytz                      2022.2.1           pyhd8ed1ab_0    conda-forge
pyyaml                    6.0             py310h5764c6d_4    conda-forge
pyzmq                     23.2.1          py310h330234f_0    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
requests                  2.28.1             pyhd8ed1ab_0    conda-forge
scipy                     1.9.0           py310hdfbd76f_0    conda-forge
seaborn                   0.11.2               hd8ed1ab_0    conda-forge
seaborn-base              0.11.2             pyhd8ed1ab_0    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                65.3.0          py310hff52083_0    conda-forge
shapely                   1.8.4           py310h5e49deb_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sniffio                   1.2.0           py310hff52083_3    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sqlite                    3.39.2               h4ff8645_1    conda-forge
stack_data                0.4.0              pyhd8ed1ab_0    conda-forge
statsmodels               0.13.2          py310hde88566_0    conda-forge
tblib                     1.7.0              pyhd8ed1ab_0    conda-forge
terminado                 0.15.0          py310hff52083_0    conda-forge
tinycss2                  1.1.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
tomli                     2.0.1           py310h06a4308_0    defaults
tomlkit                   0.11.1          py310h06a4308_0    defaults
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.1             py310h5764c6d_3    conda-forge
traitlets                 5.3.0              pyhd8ed1ab_0    conda-forge
typing_extensions         4.3.0              pyha770c72_0    conda-forge
tzdata                    2022c                h191b570_0    conda-forge
udunits2                  2.2.28               hc3e0081_0    conda-forge
unicodedata2              14.0.0          py310h5764c6d_1    conda-forge
urllib3                   1.26.11            pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.4.0              pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
wrapt                     1.14.1          py310h5eee18b_0    defaults
xorg-fixesproto           5.0               h7f98852_1002    conda-forge
xorg-inputproto           2.3.2             h7f98852_1002    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxfixes            5.0.3             h7f98852_1004    conda-forge
xorg-libxi                1.7.10               h7f98852_0    conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zict                      2.2.0              pyhd8ed1ab_0    conda-forge
zipp                      3.8.1              pyhd8ed1ab_0    conda-forge
zlib                      1.2.12               h166bdaf_2    conda-forge
zstd                      1.5.2                h6239696_4    conda-forge

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@lee1043
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lee1043 commented Sep 9, 2022 •
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@gleckler1 I guess this might be the reason why I was not able to run the PMP's mean climate for variables on a specific pressure level, and another motivation to convert the PMP to use xCDAT.

@gleckler1
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@lee1043 try this:

d = f('ua', level=(85000,85000))

@lee1043
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lee1043 commented Sep 9, 2022

I found below works, instead

d = f('ua', level=(85000+1,85000-1))

@lee1043
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lee1043 commented Sep 10, 2022 •
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I noticed this problem was not happening in my other conda env that has python 3.9 and numpy 1.21.3, not sure if this is the cause or not. Below is the conda list info for the working env.

`conda list --show-channel-urls`

# packages in environment at /home/lee1043/.conda/envs/pcmdi_metrics_dev_4_20220907:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
alsa-lib                  1.2.6.1              h7f98852_0    conda-forge
anyio                     3.6.1              pyhd8ed1ab_1    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0           py39hb9d737c_2    conda-forge
asttokens                 2.0.8              pyhd8ed1ab_0    conda-forge
attr                      2.5.1                h166bdaf_1    conda-forge
attrs                     22.1.0             pyh71513ae_1    conda-forge
babel                     2.10.3             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.11.1             pyha770c72_0    conda-forge
bleach                    5.0.1              pyhd8ed1ab_0    conda-forge
bokeh                     2.4.3              pyhd8ed1ab_3    conda-forge
brotlipy                  0.7.0           py39hb9d737c_1004    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
ca-certificates           2022.6.15            ha878542_0    conda-forge
cartopy                   0.20.1           py39h8394fad_5    conda-forge
cdat_info                 8.2.1              pyhd8ed1ab_2    conda-forge
cdms2                     3.1.5           py39hdc79e2e_14    conda-forge
cdp                       1.7.0              pyhd8ed1ab_1    conda-forge
cdtime                    3.1.4            py39he83c29a_7    conda-forge
cdutil                    8.2.1              pyhd8ed1ab_1    conda-forge
certifi                   2022.6.15          pyhd8ed1ab_1    conda-forge
cffi                      1.15.1           py39he91dace_0    conda-forge
cfgv                      3.3.1              pyhd8ed1ab_0    conda-forge
charset-normalizer        2.1.1              pyhd8ed1ab_0    conda-forge
click                     8.1.3            py39hf3d152e_0    conda-forge
cloudpickle               2.2.0              pyhd8ed1ab_0    conda-forge
coverage                  6.4.4            py39hb9d737c_0    conda-forge
cryptography              37.0.4           py39hd97740a_0    conda-forge
curl                      7.83.1               h7bff187_0    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
cytoolz                   0.12.0           py39hb9d737c_0    conda-forge
dask                      2022.9.0           pyhd8ed1ab_0    conda-forge
dask-core                 2022.9.0           pyhd8ed1ab_0    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.6.3            py39h5a03fae_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
distarray                 2.12.2             pyhd8ed1ab_2    conda-forge
distlib                   0.3.5              pyhd8ed1ab_0    conda-forge
distributed               2022.9.0           pyhd8ed1ab_0    conda-forge
enso_metrics              1.1.1            py39hf3d152e_1    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
eofs                      1.4.0                      py_0    conda-forge
esmf                      8.2.0           nompi_h1ee4d8d_2    conda-forge
esmpy                     8.2.0           nompi_py39hc8aa433_1    conda-forge
executing                 1.0.0              pyhd8ed1ab_0    conda-forge
expat                     2.4.8                h27087fc_0    conda-forge
fftw                      3.3.10          nompi_hf0379b8_105    conda-forge
filelock                  3.8.0              pyhd8ed1ab_0    conda-forge
flit-core                 3.7.1              pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.0               h8e229c2_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
freeglut                  3.2.2                h9c3ff4c_1    conda-forge
freetype                  2.12.1               hca18f0e_0    conda-forge
fsspec                    2022.8.2           pyhd8ed1ab_0    conda-forge
future                    0.18.2           py39hf3d152e_5    conda-forge
g2clib                    1.6.3                heb9ad7a_1    conda-forge
genutil                   8.2.1            py39hce5d2b2_2    conda-forge
geos                      3.10.1               h9c3ff4c_1    conda-forge
gettext                   0.19.8.1          h73d1719_1008    conda-forge
glib                      2.72.1               h6239696_0    conda-forge
glib-tools                2.72.1               h6239696_0    conda-forge
gst-plugins-base          1.20.3               hf6a322e_0    conda-forge
gstreamer                 1.20.3               hd4edc92_1    conda-forge
hdf4                      4.2.15               h9772cbc_4    conda-forge
hdf5                      1.12.2          nompi_h2386368_100    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
icu                       70.1                 h27087fc_0    conda-forge
identify                  2.5.5              pyhd8ed1ab_0    conda-forge
idna                      3.3                pyhd8ed1ab_0    conda-forge
importlib-metadata        4.11.4           py39hf3d152e_0    conda-forge
importlib_metadata        4.11.4               hd8ed1ab_0    conda-forge
importlib_resources       5.9.0              pyhd8ed1ab_0    conda-forge
iniconfig                 1.1.1              pyh9f0ad1d_0    conda-forge
ipykernel                 6.15.2             pyh210e3f2_0    conda-forge
ipython                   8.5.0              pyh41d4057_1    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
jack                      1.9.18            h8c3723f_1002    conda-forge
jasper                    2.0.33               ha77e612_0    conda-forge
jedi                      0.18.1             pyhd8ed1ab_2    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonschema                4.16.0             pyhd8ed1ab_0    conda-forge
jupyter_client            7.3.4              pyhd8ed1ab_0    conda-forge
jupyter_core              4.11.1           py39hf3d152e_0    conda-forge
jupyter_server            1.18.1             pyhd8ed1ab_0    conda-forge
jupyterlab                3.2.1              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.15.1             pyhd8ed1ab_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.4            py39hf939315_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
lazy-object-proxy         1.7.1            py39hb9d737c_1    conda-forge
lcms2                     2.12                 hddcbb42_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libblas                   3.9.0           16_linux64_openblas    conda-forge
libcap                    2.64                 ha37c62d_0    conda-forge
libcblas                  3.9.0           16_linux64_openblas    conda-forge
libcdms                   3.1.2              h2973bc7_118    conda-forge
libcf                     1.0.3           py39h6c807ef_114    conda-forge
libclang                  14.0.6          default_h2e3cab8_0    conda-forge
libclang13                14.0.6          default_h3a83d3e_0    conda-forge
libcups                   2.3.3                h3e49a29_2    conda-forge
libcurl                   7.83.1               h7bff187_0    conda-forge
libdb                     6.2.32               h9c3ff4c_0    conda-forge
libdeflate                1.13                 h166bdaf_0    conda-forge
libdrs                    3.1.2              hf593df3_118    conda-forge
libdrs_f                  3.1.2              h7e76ec7_114    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.10               h9b69904_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libflac                   1.3.4                h27087fc_0    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgfortran-ng            12.1.0              h69a702a_16    conda-forge
libgfortran5              12.1.0              hdcd56e2_16    conda-forge
libglib                   2.72.1               h2d90d5f_0    conda-forge
libglu                    9.0.0             he1b5a44_1001    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libiconv                  1.16                 h516909a_0    conda-forge
liblapack                 3.9.0           16_linux64_openblas    conda-forge
libllvm14                 14.0.6               he0ac6c6_0    conda-forge
libnetcdf                 4.8.1           nompi_h21705cb_104    conda-forge
libnghttp2                1.47.0               hdcd2b5c_1    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.21          pthreads_h78a6416_3    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.37               h753d276_4    conda-forge
libpq                     14.5                 hd77ab85_0    conda-forge
libsndfile                1.0.31               h9c3ff4c_1    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libsqlite                 3.39.3               h753d276_0    conda-forge
libssh2                   1.10.0               haa6b8db_3    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libtiff                   4.4.0                h0e0dad5_3    conda-forge
libtool                   2.4.6             h9c3ff4c_1008    conda-forge
libudev1                  249                  h166bdaf_4    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp-base              1.2.4                h166bdaf_0    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.14               h22db469_4    conda-forge
libxslt                   1.1.35               h8affb1d_0    conda-forge
libzip                    1.9.2                hc869a4a_1    conda-forge
libzlib                   1.2.12               h166bdaf_2    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lxml                      4.9.1            py39hb9d737c_0    conda-forge
lz4                       4.0.0            py39h029007f_2    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
markupsafe                2.1.1            py39hb9d737c_1    conda-forge
matplotlib                3.4.3            py39hf3d152e_2    conda-forge
matplotlib-base           3.4.3            py39h2fa2bec_2    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mistune                   2.0.4              pyhd8ed1ab_0    conda-forge
msgpack-python            1.0.4            py39hf939315_0    conda-forge
mysql-common              8.0.30               haf5c9bc_1    conda-forge
mysql-libs                8.0.30               h28c427c_1    conda-forge
nb_conda                  2.2.1                    unix_6    conda-forge
nb_conda_kernels          2.3.1            py39hf3d152e_1    conda-forge
nbclassic                 0.4.3              pyhd8ed1ab_0    conda-forge
nbclient                  0.6.8              pyhd8ed1ab_0    conda-forge
nbconvert                 7.0.0              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.0.0              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.0.0              pyhd8ed1ab_0    conda-forge
nbformat                  5.4.0              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
nest-asyncio              1.5.5              pyhd8ed1ab_0    conda-forge
netcdf-fortran            4.6.0           nompi_hc402ea5_100    conda-forge
nodeenv                   1.7.0              pyhd8ed1ab_0    conda-forge
notebook                  6.4.12             pyha770c72_0    conda-forge
notebook-shim             0.1.0              pyhd8ed1ab_0    conda-forge
nspr                      4.32                 h9c3ff4c_1    conda-forge
nss                       3.78                 h2350873_0    conda-forge
numpy                     1.21.3           py39hdbf815f_1    conda-forge
openblas                  0.3.21          pthreads_h320a7e8_3    conda-forge
openjpeg                  2.5.0                h7d73246_1    conda-forge
openssl                   1.1.1q               h166bdaf_0    conda-forge
output_viewer             1.3.3              pyhd8ed1ab_1    conda-forge
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pandas                    1.4.4            py39h1832856_0    conda-forge
pandoc                    2.19.2               ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.3.0              pyhd8ed1ab_0    conda-forge
patsy                     0.5.2              pyhd8ed1ab_0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.2.0            py39hd5dbb17_2    conda-forge
pip                       21.2.4             pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
platformdirs              2.5.2              pyhd8ed1ab_1    conda-forge
pluggy                    1.0.0            py39hf3d152e_3    conda-forge
ply                       3.11                       py_1    conda-forge
portaudio                 19.6.0               h57a0ea0_5    conda-forge
pre-commit                2.15.0           py39hf3d152e_1    conda-forge
pre_commit                2.15.0               hd8ed1ab_1    conda-forge
proj                      8.2.0                h277dcde_0    conda-forge
prometheus_client         0.14.1             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.31             pyha770c72_0    conda-forge
psutil                    5.9.2            py39hb9d737c_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pulseaudio                14.0                 h7f54b18_8    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
py                        1.11.0             pyh6c4a22f_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pygments                  2.13.0             pyhd8ed1ab_0    conda-forge
pyopenssl                 22.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyproj                    3.3.0            py39h1b810de_0    conda-forge
pyqt                      5.15.7           py39h18e9c17_0    conda-forge
pyqt5-sip                 12.11.0          py39h5a03fae_0    conda-forge
pyrsistent                0.18.1           py39hb9d737c_1    conda-forge
pyshp                     2.3.1              pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
pytest                    6.2.5            py39hf3d152e_3    conda-forge
pytest-cov                3.0.0              pyhd8ed1ab_0    conda-forge
python                    3.9.7           hb7a2778_3_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.1             pyhd8ed1ab_0    conda-forge
python_abi                3.9                      2_cp39    conda-forge
pytz                      2022.2.1           pyhd8ed1ab_0    conda-forge
pyyaml                    6.0              py39hb9d737c_4    conda-forge
pyzmq                     23.2.1           py39headdf64_0    conda-forge
qt-main                   5.15.4               ha5833f6_2    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
requests                  2.28.1             pyhd8ed1ab_1    conda-forge
scipy                     1.9.1            py39h8ba3f38_0    conda-forge
seaborn                   0.11.1               hd8ed1ab_1    conda-forge
seaborn-base              0.11.1             pyhd8ed1ab_1    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                65.3.0             pyhd8ed1ab_1    conda-forge
shapely                   1.8.0            py39h98e2149_4    conda-forge
sip                       6.6.2            py39h5a03fae_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sqlite                    3.39.3               h4ff8645_0    conda-forge
stack_data                0.5.0              pyhd8ed1ab_0    conda-forge
statsmodels               0.13.2           py39hd257fcd_0    conda-forge
tblib                     1.7.0              pyhd8ed1ab_0    conda-forge
terminado                 0.15.0           py39hf3d152e_0    conda-forge
tinycss2                  1.1.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.1              py39hb9d737c_3    conda-forge
traitlets                 5.3.0              pyhd8ed1ab_0    conda-forge
typing_extensions         4.3.0              pyha770c72_0    conda-forge
tzdata                    2022c                h191b570_0    conda-forge
udunits2                  2.2.28               hc3e0081_0    conda-forge
ukkonen                   1.0.1            py39hf939315_2    conda-forge
urllib3                   1.26.11            pyhd8ed1ab_0    conda-forge
virtualenv                20.16.5          py39hf3d152e_0    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.4.1              pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
xcb-util                  0.4.0                h166bdaf_0    conda-forge
xcb-util-image            0.4.0                h166bdaf_0    conda-forge
xcb-util-keysyms          0.4.0                h166bdaf_0    conda-forge
xcb-util-renderutil       0.3.9                h166bdaf_0    conda-forge
xcb-util-wm               0.4.1                h166bdaf_0    conda-forge
xorg-fixesproto           5.0               h7f98852_1002    conda-forge
xorg-inputproto           2.3.2             h7f98852_1002    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxfixes            5.0.3             h7f98852_1004    conda-forge
xorg-libxi                1.7.10               h7f98852_0    conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zict                      2.2.0              pyhd8ed1ab_0    conda-forge
zipp                      3.8.1              pyhd8ed1ab_0    conda-forge
zlib                      1.2.12               h166bdaf_2    conda-forge
zstd                      1.5.2                h6239696_4    conda-forge

@acordonez acordonez mentioned this issue Oct 20, 2022
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@gleckler1 @lee1043