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Update index check log file with finished library container and well #564

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idalindegaard opened this issue Nov 26, 2024 · 0 comments
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@idalindegaard
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idalindegaard commented Nov 26, 2024

Lims Issue

For definitions of headings below see Basic Concepts.

Work Flow: NovaSeq X v1 and NovaSeq 6000 v1
Protocol: NovaSeq X v1, NovaSeq v3
Step: Define Run Format and Calculate Volumes (NovaSeq X), Define Run Format and Calculate Volumes (Nova Seq)

Description:

With many index clashes, it is difficult to discern which samples belongs to which plate and well, and therefore it would be helpful with two new fields "source plate" and "source well" of the index clashed samples in the sequencing step. "Source" in this case indicates the finished library plate that can be found in the queue of the steps Define Run Format and Calculate Volumes (NovaSeq X) and Define Run Format and Calculate Volumes (Nova Seq).

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