Release v1.4.0

preparations for new cg_lims database (#89)(minor)

Added

• database colection models for load to arnold
• a EPPs to create a prep and sample document

Deleted

• the api since arnolod will serve as lims api

Release v1.3.2

set reads missing (#90)

• set reads missing

• set up set cli

• fixed unit tests

• count successful samples

• final clean up

• set_ -> set

• clean up exceptions and messages

• removed useless pass

• removed unused import

• implement PR feedback

• get udf

• tests

• tests

• threading?

• threading?

• all local tests pass?

• ...

• try again

• clean up

• restart server missing udf TC

• fix test

• doc string

Release v1.3.1

first EPP attempt (#67)

• first EPP attempt

• unit tests and improvements

• capital B

• parametrize unit tests and add mocks

• add pytest-mock to requirements-dev.txt

• add mock to requirements-dev.txt

Co-authored-by: mayabrandi [email protected]

Release v1.3.0

Color coding the map (#76) (minor)

Added

• red color code for warning samples in the pool
• different colors for different source containers to solve issue #59
• saving wanrinings on artifact if amount gets to high or to low in the pool calculations

Release v1.2.6

Update sars_cov2_prep_file.py (#83) (PATCH)

Changed

• file name containing container name

Release v1.2.5

new script to fetch reads to sequence from the right place (#80) (Minor)

Added

• new script to fetch reads to sequence from the right place

Release v1.2.4

bugfix (#81)

Release v1.2.3

Pool reads (#79) (Minor)

Added

• script to sum missing reads for pool

Release v1.2.2

Update bumpversion ci (#78) (patch)

Changed

• Update bump2version-ci to v3

Release v1.2.1

Readme (patch) (#77)

Changed

• Update README with new release documentation