NAMESPACE

# Generated by roxygen2: do not edit by hand

export(.convertRsetMolecularProfilesToSE)
export(RadioSet)
export(RadioSig)
export(availableRSets)
export(checkRSetStructure)
export(computeAUC)
export(computeD10)
export(computeSF2)
export(doseResponseCurve)
export(downloadRSet)
export(linearQuadraticModel)
export(plotCurve)
export(radSensitivitySig)
exportMethods("[")
exportMethods("annotation<-")
exportMethods("cellInfo<-")
exportMethods("cellNames<-")
exportMethods("curation<-")
exportMethods("datasetType<-")
exportMethods("fNames<-")
exportMethods("featureInfo<-")
exportMethods("molecularProfiles<-")
exportMethods("molecularProfilesSlot<-")
exportMethods("pertNumber<-")
exportMethods("phenoInfo<-")
exportMethods("radiationInfo<-")
exportMethods("radiationTypes<-")
exportMethods("sensNumber<-")
exportMethods("sensitivityInfo<-")
exportMethods("sensitivityProfiles<-")
exportMethods("sensitivityRaw<-")
exportMethods("sensitivitySlot<-")
exportMethods(annotation)
exportMethods(cellInfo)
exportMethods(cellNames)
exportMethods(curation)
exportMethods(datasetType)
exportMethods(dateCreated)
exportMethods(dim)
exportMethods(fNames)
exportMethods(featureInfo)
exportMethods(mDataNames)
exportMethods(molecularProfiles)
exportMethods(molecularProfilesSlot)
exportMethods(name)
exportMethods(pertNumber)
exportMethods(phenoInfo)
exportMethods(radiationInfo)
exportMethods(radiationTypes)
exportMethods(sensNumber)
exportMethods(sensitivityInfo)
exportMethods(sensitivityMeasures)
exportMethods(sensitivityProfiles)
exportMethods(sensitivityRaw)
exportMethods(sensitivitySlot)
exportMethods(show)
exportMethods(showSigAnnot)
exportMethods(subsetTo)
exportMethods(summarizeMolecularProfiles)
exportMethods(summarizeSensitivityProfiles)
import(RColorBrewer)
import(downloader)
import(methods)
importClassesFrom(CoreGx,CoreSet)
importClassesFrom(SummarizedExperiment,Assays)
importClassesFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(Biobase,AnnotatedDataFrame)
importFrom(Biobase,annotation)
importFrom(Biobase,assayData)
importFrom(Biobase,assayDataElementNames)
importFrom(Biobase,experimentData)
importFrom(Biobase,exprs)
importFrom(Biobase,fData)
importFrom(Biobase,pData)
importFrom(Biobase,protocolData)
importFrom(BiocParallel,bplapply)
importFrom(CoreGx,"cellInfo<-")
importFrom(CoreGx,"featureInfo<-")
importFrom(CoreGx,"molecularProfiles<-")
importFrom(CoreGx,"phenoInfo<-")
importFrom(CoreGx,"sensitivityProfiles<-")
importFrom(CoreGx,.error)
importFrom(CoreGx,.message)
importFrom(CoreGx,.unionList)
importFrom(CoreGx,.warning)
importFrom(CoreGx,CoreSet)
importFrom(CoreGx,cellInfo)
importFrom(CoreGx,cellNames)
importFrom(CoreGx,dateCreated)
importFrom(CoreGx,featureInfo)
importFrom(CoreGx,mDataNames)
importFrom(CoreGx,molecularProfiles)
importFrom(CoreGx,name)
importFrom(CoreGx,phenoInfo)
importFrom(CoreGx,sensNumber)
importFrom(CoreGx,sensitivityMeasures)
importFrom(CoreGx,sensitivityProfiles)
importFrom(CoreGx,updateCellId)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,SimpleList)
importFrom(S4Vectors,metadata)
importFrom(SummarizedExperiment,"assayNames<-")
importFrom(SummarizedExperiment,"assays<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"rowData<-")
importFrom(SummarizedExperiment,Assays)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,assays)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(assertthat,are_equal)
importFrom(caTools,trapz)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,rgb)
importFrom(graphics,axis)
importFrom(graphics,hist)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,rect)
importFrom(magicaxis,magaxis)
importFrom(matrixStats,colMeans2)
importFrom(matrixStats,colMedians)
importFrom(matrixStats,rowMeans2)
importFrom(matrixStats,rowMedians)
importFrom(methods,callNextMethod)
importFrom(parallel,detectCores)
importFrom(parallel,splitIndices)
importFrom(reshape2,acast)
importFrom(scales,rescale)
importFrom(stats,anova)
importFrom(stats,complete.cases)
importFrom(stats,formula)
importFrom(stats,glm)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,pf)
importFrom(stats,pnorm)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stats,var)
importFrom(utils,read.csv)
importFrom(utils,sessionInfo)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.table)
importMethodsFrom(CoreGx,"annotation<-")
importMethodsFrom(CoreGx,"cellNames<-")
importMethodsFrom(CoreGx,"curation<-")
importMethodsFrom(CoreGx,"datasetType<-")
importMethodsFrom(CoreGx,"fNames<-")
importMethodsFrom(CoreGx,"molecularProfilesSlot<-")
importMethodsFrom(CoreGx,"pertNumber<-")
importMethodsFrom(CoreGx,"sensNumber<-")
importMethodsFrom(CoreGx,"sensitivityInfo<-")
importMethodsFrom(CoreGx,"sensitivityRaw<-")
importMethodsFrom(CoreGx,"sensitivitySlot<-")
importMethodsFrom(CoreGx,annotation)
importMethodsFrom(CoreGx,curation)
importMethodsFrom(CoreGx,datasetType)
importMethodsFrom(CoreGx,fNames)
importMethodsFrom(CoreGx,molecularProfilesSlot)
importMethodsFrom(CoreGx,pertNumber)
importMethodsFrom(CoreGx,sensitivityInfo)
importMethodsFrom(CoreGx,sensitivityRaw)
importMethodsFrom(CoreGx,sensitivitySlot)
importMethodsFrom(CoreGx,showSigAnnot)
importMethodsFrom(CoreGx,subsetTo)
importMethodsFrom(CoreGx,summarizeMolecularProfiles)
importMethodsFrom(CoreGx,summarizeSensitivityProfiles)