setup.py

#!/usr/bin/env python
# -*- coding: utf-8 -*-

# Copyright 2020 EMBL - European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import os
import sys

from setuptools import find_packages, setup

_base = os.path.dirname(os.path.abspath(__file__))
_requirements = os.path.join(_base, "requirements.txt")
_requirements_test = os.path.join(_base, "requirements-test.txt")

install_requirements = []
with open(_requirements) as f:
    install_requirements = f.read().splitlines()

test_requirements = []
if "test" in sys.argv:
    with open(_requirements_test) as f:
        test_requirements = f.read().splitlines()

long_description = ""
with open(os.path.join(_base, "README.md"), "rb") as f:
    long_description = f.read().decode("utf-8")

setup(
    name="mg-toolkit",
    url="https://github.com/EBI-metagenomics/emg-toolkit",
    author="EBI Microbiome Informatics Team",
    description="Metagenomics toolkit.",
    long_description=long_description,
    long_description_content_type="text/markdown",
    packages=find_packages(exclude=["ez_setup"]),
    version="0.10.4",
    python_requires=">=3.8",
    install_requires=install_requirements,
    setup_requires=["pytest-runner"],
    tests_require=test_requirements,
    include_package_data=True,
    zip_safe=False,
    license="Apache Software License",
    classifiers=[
        "Programming Language :: Python :: 3.8",
        "Programming Language :: Python :: 3.9",
        "Programming Language :: Python :: 3.10",
        "Development Status :: 4 - Beta",
        "Intended Audience :: Science/Research",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "License :: OSI Approved :: Apache Software License",
        "Operating System :: OS Independent",
    ],
    test_suite="tests",
    entry_points={
        "console_scripts": [
            "mg-toolkit=mg_toolkit.__main__:main",
        ],
    },
)