.gitlab-ci.yml

include:
    - project: "epi2melabs/ci-templates"
      file: "push-github.yaml"

variables:
      OWNER: ontresearch
      GIT_SUBMODULE_STRATEGY: recursive
      IMAGENAME: "epi2melabs-notebook"
image: ${IMAGE}

stages:
    - build
    - release

build-branch:
    stage: build
    only:
        - branches
    before_script:
        - apk add make bash git openssl py3-virtualenv python3
    script:
        - echo "Logging in to internal gitlab container registry";
        - echo ${CI_BUILD_TOKEN} | docker login --username gitlab-ci-token --password-stdin ${CI_REGISTRY};
        - UPSTREAM=dev PYTHON=python3 make ${IMAGENAME};
        - TAG=${CI_REGISTRY}/${CI_PROJECT_PATH}/${IMAGENAME}:${CI_COMMIT_REF_NAME};
        - echo "Pushing ${TAG}";
        - docker tag $OWNER/${IMAGENAME}:latest ${TAG};
        - docker push ${TAG};
        # on dev tag/push with commit hash also
        - if [[ ${CI_COMMIT_BRANCH} == 'dev' ]]; then
              DEVTAG=${TAG}-${CI_COMMIT_SHORT_SHA};
              echo "Pushing ${DEV_TAG}";
              docker tag $OWNER/${IMAGENAME}:latest ${DEVTAG};
              docker push ${DEVTAG};
              HUBTAG=ontresearch/${IMAGENAME}:dev;
              echo "Pushing dockerhub ${HUBTAG}";
              echo ${DOCKERHUB_TOKEN} | docker login --username epi2melabs --password-stdin;
              docker tag $OWNER/${IMAGENAME}:latest ${HUBTAG};
              docker push ${HUBTAG};
          fi
        - echo "All done";

release-tag:
    stage: release
    only:
        - tags
    before_script:
        - apk add make bash git openssl py3-virtualenv python3
    script:
        # We could pull the dev-commit tag from the repo, but instead let's
        # always build from the latest tag of the upstream image on dockerhub.
        # All being well this should amount to the same thing.
        - echo "Logging in to internal gitlab container registry";
        - echo ${DOCKERHUB_TOKEN} | docker login --username epi2melabs --password-stdin;
        - export UPSTREAM=$(PYTHON=python3 make echo_latest_upstream | tail -n 1);
        - echo "Upstream tag ${UPSTREAM}";
        - PYTHON=python3 make ${IMAGENAME};
        - HUBTAG=ontresearch/${IMAGENAME}:${CI_COMMIT_TAG};
        - echo "Pushing dockerhub ${HUBTAG}";
        - docker tag $OWNER/${IMAGENAME}:latest ${HUBTAG};
        - docker push ${HUBTAG};


# Push repo to github
# push-github: - from template

# Rebuild notebooks and push to github blog
rebuild-notebooks:
    stage: release
    image: $GH_PUSH_IMAGE
    script:
        # install prerequisites
        - apt-get update && apt-get -y install git python3-pip
        - pip3 install jupyterlab
        # set git
        - git config --global user.email "epi2melabs@nanoporetech.com"
        - git config --global user.name "epi2melabs-bot"
        # do stuff
        - jupyter nbconvert --to html tutorials/*.ipynb
        # only push existing notebooks, not new ones
        - git clone https://user:${BLOG_UPDATE_TOKEN}@${CI_SERVER_HOST}/${CI_PROJECT_ROOT_NAMESPACE}/labs-flexiblog.git
        - cd labs-flexiblog
        - cp ../tutorials/*.html site/static/notebooks
        - git add -u site/static/notebooks/
        - git commit -m "Updating all notebooks"
        - git push origin dev
    rules:
        - if: '$CI_COMMIT_TAG =~ /^v[[:digit:]]+\.[[:digit:]]+\.[[:digit:]]+$/'