From 76d45b8931fdcd215ca2be997c518f8264c49faa Mon Sep 17 00:00:00 2001 From: Kevin Moon Date: Tue, 20 Feb 2024 15:42:26 -0700 Subject: [PATCH] Update phate.py Updated the reference --- Python/phate/phate.py | 9 ++++----- 1 file changed, 4 insertions(+), 5 deletions(-) diff --git a/Python/phate/phate.py b/Python/phate/phate.py index 9af61fc..7db124b 100644 --- a/Python/phate/phate.py +++ b/Python/phate/phate.py @@ -39,7 +39,7 @@ class PHATE(BaseEstimator): Potential of Heat-diffusion for Affinity-based Trajectory Embedding (PHATE) embeds high dimensional single-cell data into two or three dimensions for visualization of biological progressions as described - in Moon et al, 2017 [1]_. + in Moon et al, 2019 [1]_. Parameters ---------- @@ -157,10 +157,9 @@ class PHATE(BaseEstimator): References ---------- - .. [1] Moon KR, van Dijk D, Zheng W, *et al.* (2017), - *PHATE: A Dimensionality Reduction Method for Visualizing Trajectory - Structures in High-Dimensional Biological Data*, - `BioRxiv `_. + .. [1] Moon KR, van Dijk D, Zheng W, *et al.* (2019), + *Visualizing transitions and structure for biological data exploration*, + `Nature Biotechnology `_. """ def __init__(