diff --git a/notebooks/challenge/cam-chem_waccm/exercise_1.ipynb b/notebooks/challenge/cam-chem_waccm/exercise_1.ipynb index c03cb785c..5556bab11 100644 --- a/notebooks/challenge/cam-chem_waccm/exercise_1.ipynb +++ b/notebooks/challenge/cam-chem_waccm/exercise_1.ipynb @@ -2,7 +2,6 @@ "cells": [ { "cell_type": "markdown", - "id": "arctic-workstation", "metadata": {}, "source": [ "# 1: Control case: running with chemistry" @@ -10,7 +9,6 @@ }, { "cell_type": "markdown", - "id": "urban-jason", "metadata": {}, "source": [ "\n", @@ -31,7 +29,6 @@ }, { "cell_type": "markdown", - "id": "animal-crash", "metadata": {}, "source": [ "\n", @@ -92,7 +89,6 @@ }, { "cell_type": "markdown", - "id": "synthetic-reproduction", "metadata": {}, "source": [ "\n", @@ -234,7 +230,6 @@ { "cell_type": "code", "execution_count": null, - "id": "northern-agency", "metadata": {}, "outputs": [], "source": [] @@ -242,7 +237,7 @@ ], "metadata": { "kernelspec": { - "display_name": "Python 3 (ipykernel)", + "display_name": "Python 3", "language": "python", "name": "python3" }, @@ -256,7 +251,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.10.13" + "version": "3.7.6" } }, "nbformat": 4, diff --git a/notebooks/challenge/cam-chem_waccm/exercise_2.ipynb b/notebooks/challenge/cam-chem_waccm/exercise_2.ipynb index e350d0332..2f27827ce 100644 --- a/notebooks/challenge/cam-chem_waccm/exercise_2.ipynb +++ b/notebooks/challenge/cam-chem_waccm/exercise_2.ipynb @@ -2,7 +2,6 @@ "cells": [ { "cell_type": "markdown", - "id": "prepared-adaptation", "metadata": {}, "source": [ "# 2: Test case: changing the chemistry" @@ -10,7 +9,6 @@ }, { "cell_type": "markdown", - "id": "sound-recovery", "metadata": {}, "source": [ "\n", @@ -46,7 +44,6 @@ }, { "cell_type": "markdown", - "id": "daily-acting", "metadata": {}, "source": [ "\n", @@ -73,13 +70,13 @@ "(note this will be different for WACCM)\n", " \n", "- Use xmlchange to append a pointer to your user mechanism:
\n", - "``--usr_mech_infile `pwd`/my_chem_mech.in``\n", + "``./xmlchange --append CAM_CONFIG_OPTS=\"--usr_mech_infile `pwd`/my_chem_mech.in\"``\n", " \n", "- Check the ``CAM_CONFIG_OPTS`` has been changed
\n", "``./xmlquery CAM_CONFIG_OPTS``
\n", "``CAM_CONFIG_OPTS: -phys cam6 -chem trop_strat_mam4_vbs -age_of_air_trcs --usr_mech_infile /glade/u/home/$USER/cases/$CASENAME/my_chem_mech.in``\n", " \n", - "- You will need to reset the case setup, and rebuild before submitting\n", + "- When an important xml variable like CAM_CONFIG_OPTS is changed, resetting the setup is needed. You will need to reset the case setup, and rebuild before submitting. (Note that in general, you only need to reset or clean build when a message shows up in the command prompt stating to reset or clean build).\n", "\n", "\n", "\n" @@ -87,7 +84,6 @@ }, { "cell_type": "markdown", - "id": "political-wages", "metadata": {}, "source": [ "\n", @@ -252,7 +248,6 @@ { "cell_type": "code", "execution_count": null, - "id": "alpha-politics", "metadata": {}, "outputs": [], "source": [] @@ -274,7 +269,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.9.1" + "version": "3.7.6" } }, "nbformat": 4, diff --git a/notebooks/challenge/cam-chem_waccm/exercise_3.ipynb b/notebooks/challenge/cam-chem_waccm/exercise_3.ipynb index b9e3ae0f9..f37778428 100644 --- a/notebooks/challenge/cam-chem_waccm/exercise_3.ipynb +++ b/notebooks/challenge/cam-chem_waccm/exercise_3.ipynb @@ -2,7 +2,6 @@ "cells": [ { "cell_type": "markdown", - "id": "expensive-beatles", "metadata": {}, "source": [ "# 3: Test case: changing the emissions" @@ -10,7 +9,6 @@ }, { "cell_type": "markdown", - "id": "brave-confirmation", "metadata": {}, "source": [ "\n", @@ -31,7 +29,6 @@ }, { "cell_type": "markdown", - "id": "checked-arrest", "metadata": {}, "source": [ "\n", @@ -43,9 +40,10 @@ "\n", "**Pointing to new emission files**\n", "\n", - "Point to new emission files in your ``user_nl_cam`` file. Note that you will also need to include pointers to emissions that you are not changing.\n", + "Point to new emission files in your ``user_nl_cam`` file. Note that you will also need to include pointers to emissions that you are not changing. The namelist variable for emissions is srf_emis_specifier. Copy the whole srf_emis_specifier entry from ``atm_in`` to ``user_nl_cam`` before editing. Emission files will add up in CESM.\n", "\n", "The location of qfed fire emissions on glade is described on the wiki: https://wiki.ucar.edu/display/camchem/Emission+Inventories\n", + "Search for files with bb in their name, which are fire / biomass burning emissions. Global one degree emissions are usually stored under an 'f09' folder.\n", " \n", "**Make sure your model start date is covered by the emissions files**\n", "For this model set up will also need to double check the following are available:\n", @@ -60,7 +58,6 @@ }, { "cell_type": "markdown", - "id": "three-taiwan", "metadata": {}, "source": [ "\n", @@ -158,90 +155,90 @@ "You can do this with a text editor.\n", "\n", "**# Add in different emissions**\n", - "Also add in the namelist pointers to emission files, replacing the fire emissions (every file with 'bb' in the name) with qfed files found at ``/glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/``\n", + "Also add in the namelist pointers to emission files, replacing the fire emissions (every file with 'bb' in the name) with qfed files found at ``/glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/``\n", "\n", "```\n", "&chem_inparm\n", " srf_emis_specifier\t\t= 'BENZENE -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_BENZENE_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'BENZENE -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_BENZENE_0.9x1.25_mol_2000_2022.nc',\n", + " 'BENZENE -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_BENZENE_0.9x1.25_mol_2000_2022.nc',\n", " 'BIGALK -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_BIGALK_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'BIGALK -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_BIGALK_0.9x1.25_mol_2000_2022.nc',\n", + " 'BIGALK -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_BIGALK_0.9x1.25_mol_2000_2022.nc',\n", " 'BIGENE -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_BIGENE_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'BIGENE -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_BIGENE_0.9x1.25_mol_2000_2022.nc',\n", + " 'BIGENE -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_BIGENE_0.9x1.25_mol_2000_2022.nc',\n", " 'C2H2 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C2H2_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'C2H2 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_C2H2_0.9x1.25_mol_2000_2022.nc',\n", + " 'C2H2 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_C2H2_0.9x1.25_mol_2000_2022.nc',\n", " 'C2H4 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C2H4_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'C2H4 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_C2H4_0.9x1.25_mol_2000_2022.nc',\n", + " 'C2H4 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_C2H4_0.9x1.25_mol_2000_2022.nc',\n", " 'C2H4 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C2H4_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'C2H5OH -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C2H5OH_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'C2H5OH -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_C2H5OH_0.9x1.25_mol_2000_2022.nc',\n", + " 'C2H5OH -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_C2H5OH_0.9x1.25_mol_2000_2022.nc',\n", " 'C2H6 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C2H6_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'C2H6 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_C2H6_0.9x1.25_mol_2000_2022.nc',\n", + " 'C2H6 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_C2H6_0.9x1.25_mol_2000_2022.nc',\n", " 'C2H6 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C2H6_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'C3H6 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C3H6_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'C3H6 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_C3H6_0.9x1.25_mol_2000_2022.nc',\n", + " 'C3H6 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_C3H6_0.9x1.25_mol_2000_2022.nc',\n", " 'C3H6 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C3H6_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'C3H8 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C3H8_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'C3H8 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_C3H8_0.9x1.25_mol_2000_2022.nc',\n", + " 'C3H8 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_C3H8_0.9x1.25_mol_2000_2022.nc',\n", " 'C3H8 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_C3H8_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'CH2O -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CH2O_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'CH2O -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH2O_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH2O -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH2O_0.9x1.25_mol_2000_2022.nc',\n", " 'CH3CHO -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CH3CHO_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'CH3CHO -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH3CHO_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH3CHO -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH3CHO_0.9x1.25_mol_2000_2022.nc',\n", " 'CH3CN -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CH3CN_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'CH3CN -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH3CN_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH3CN -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH3CN_0.9x1.25_mol_2000_2022.nc',\n", " 'CH3COCH3 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CH3COCH3_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'CH3COCH3 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH3COCH3_0.9x1.25_mol_2000_2022.nc',\n", - " 'CH3COCHO -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH3COCHO_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH3COCH3 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH3COCH3_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH3COCHO -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH3COCHO_0.9x1.25_mol_2000_2022.nc',\n", " 'CH3COOH -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CH3COOH_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'CH3COOH -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH3COOH_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH3COOH -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH3COOH_0.9x1.25_mol_2000_2022.nc',\n", " 'CH3OH -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CH3OH_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'CH3OH -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CH3OH_0.9x1.25_mol_2000_2022.nc',\n", + " 'CH3OH -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CH3OH_0.9x1.25_mol_2000_2022.nc',\n", " 'CO -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CO_anthro_surface_1750-2015_0.9x1.25_c20180504.nc',\n", - " 'CO -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_CO_0.9x1.25_mol_2000_2022.nc',\n", + " 'CO -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_CO_0.9x1.25_mol_2000_2022.nc',\n", " 'CO -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_CO_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'E90 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions_E90global_surface_1750-2100_0.9x1.25_c20170322.nc',\n", - " 'GLYALD -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_GLYALD_0.9x1.25_mol_2000_2022.nc',\n", + " 'GLYALD -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_GLYALD_0.9x1.25_mol_2000_2022.nc',\n", " 'HCN -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_HCN_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'HCN -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_HCN_0.9x1.25_mol_2000_2022.nc',\n", + " 'HCN -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_HCN_0.9x1.25_mol_2000_2022.nc',\n", " 'HCOOH -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_HCOOH_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'HCOOH -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_HCOOH_0.9x1.25_mol_2000_2022.nc',\n", - " 'ISOP -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_ISOP_0.9x1.25_mol_2000_2022.nc',\n", + " 'HCOOH -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_HCOOH_0.9x1.25_mol_2000_2022.nc',\n", + " 'ISOP -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_ISOP_0.9x1.25_mol_2000_2022.nc',\n", " 'IVOC -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_IVOC_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'IVOC -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_IVOC_0.9x1.25_mol_2000_2022.nc',\n", + " 'IVOC -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_IVOC_0.9x1.25_mol_2000_2022.nc',\n", " 'MEK -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_MEK_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'MEK -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_MEK_0.9x1.25_mol_2000_2022.nc',\n", - " 'MTERP -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_TERPENES_0.9x1.25_mol_2000_2022.nc ',\n", + " 'MEK -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_MEK_0.9x1.25_mol_2000_2022.nc',\n", + " 'MTERP -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_TERPENES_0.9x1.25_mol_2000_2022.nc ',\n", " 'NH3 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_NH3_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'NH3 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_NH3_0.9x1.25_mol_2000_2022.nc ',\n", + " 'NH3 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_NH3_0.9x1.25_mol_2000_2022.nc ',\n", " 'NH3 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_NH3_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'NO -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_NO_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'NO -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_NO_0.9x1.25_mol_2000_2022.nc ',\n", + " 'NO -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_NO_0.9x1.25_mol_2000_2022.nc ',\n", " 'NO -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_NO_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", " 'SVOC -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_SVOC_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'SVOC -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_SVOC_0.9x1.25_mol_2000_2022.nc ',\n", + " 'SVOC -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_SVOC_0.9x1.25_mol_2000_2022.nc ',\n", " 'TOLUENE -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_TOLUENE_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'TOLUENE -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_TOLUENE_0.9x1.25_mol_2000_2022.nc ',\n", + " 'TOLUENE -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_TOLUENE_0.9x1.25_mol_2000_2022.nc ',\n", " 'XYLENES -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_XYLENES_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'XYLENES -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_XYLENES_0.9x1.25_mol_2000_2022.nc ',\n", + " 'XYLENES -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_XYLENES_0.9x1.25_mol_2000_2022.nc ',\n", " 'bc_a4 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_bc_a4_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'bc_a4 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_bc_a4_0.9x1.25_mol_2000_2022.nc ',\n", - " 'DMS -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_DMS_0.9x1.25_mol_2000_2022.nc ',\n", + " 'bc_a4 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_bc_a4_0.9x1.25_mol_2000_2022.nc ',\n", + " 'DMS -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_DMS_0.9x1.25_mol_2000_2022.nc ',\n", " 'DMS -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_DMS_other_surface_1750-2015_0.9x1.25_c20170322.nc',\n", - " 'num_a1 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_num_so4_a1_0.9x1.25_mol_2000_2022.nc ',\n", + " 'num_a1 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_num_so4_a1_0.9x1.25_mol_2000_2022.nc ',\n", " 'num_a1 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_num_so4_a1_anthro-ag-ship_surface_1750-2015_0.9x1.25_c20170616.nc',\n", " 'num_a2 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_num_so4_a2_anthro-res_surface_1750-2015_0.9x1.25_c20170616.nc',\n", - " 'num_a4 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_num_bc_a4_0.9x1.25_mol_2000_2022.nc ',\n", + " 'num_a4 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_num_bc_a4_0.9x1.25_mol_2000_2022.nc ',\n", " 'num_a4 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_num_bc_a4_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", " 'num_a4 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_num_pom_a4_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'num_a4 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_num_pom_a4_0.9x1.25_mol_2000_2022.nc ',\n", + " 'num_a4 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_num_pom_a4_0.9x1.25_mol_2000_2022.nc ',\n", " 'pom_a4 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_pom_a4_anthro_surface_1750-2015_0.9x1.25_c20170608.nc',\n", - " 'pom_a4 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_pom_a4_0.9x1.25_mol_2000_2022.nc ',\n", + " 'pom_a4 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_pom_a4_0.9x1.25_mol_2000_2022.nc ',\n", " 'SO2 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_SO2_anthro-ag-ship-res_surface_1750-2015_0.9x1.25_c20170616.nc',\n", " 'SO2 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_SO2_anthro-ene_surface_1750-2015_0.9x1.25_c20170616.nc',\n", - " 'SO2 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_SO2_0.9x1.25_mol_2000_2022.nc',\n", + " 'SO2 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_SO2_0.9x1.25_mol_2000_2022.nc',\n", " 'so4_a1 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_so4_a1_anthro-ag-ship_surface_1750-2015_0.9x1.25_c20170616.nc',\n", - " 'so4_a1 -> /glade/campaign/cesm/acom/MUSICA/emissions/qfed2.5_finn/f09/qfed.emis_so4_a1_0.9x1.25_mol_2000_2022.nc ',\n", + " 'so4_a1 -> /glade/campaign/acom/MUSICA/emis/qfed/qfed2.5_finn/f09/qfed.emis_so4_a1_0.9x1.25_mol_2000_2022.nc ',\n", " 'so4_a2 -> /glade/campaign/cesm/cesmdata/cseg/inputdata/atm/cam/chem/emis/CMIP6_emissions_1750_2015/emissions-cmip6_so4_a2_anthro-res_surface_1750-2015_0.9x1.25_c20170616.nc'\n", "/\n", "```\n", @@ -335,7 +332,6 @@ { "cell_type": "code", "execution_count": null, - "id": "affected-donna", "metadata": {}, "outputs": [], "source": [] @@ -357,7 +353,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.9.1" + "version": "3.7.6" } }, "nbformat": 4, diff --git a/notebooks/challenge/cam-chem_waccm/visualization.ipynb b/notebooks/challenge/cam-chem_waccm/visualization.ipynb index 7cab6a1ac..881ee7115 100644 --- a/notebooks/challenge/cam-chem_waccm/visualization.ipynb +++ b/notebooks/challenge/cam-chem_waccm/visualization.ipynb @@ -2,7 +2,6 @@ "cells": [ { "cell_type": "markdown", - "id": "straight-opposition", "metadata": {}, "source": [ "# 4: Visualization option with GEOV" @@ -10,7 +9,6 @@ }, { "cell_type": "markdown", - "id": "industrial-enhancement", "metadata": {}, "source": [ "\n", @@ -57,7 +55,6 @@ { "cell_type": "code", "execution_count": null, - "id": "weekly-kennedy", "metadata": {}, "outputs": [], "source": [] @@ -79,7 +76,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.9.1" + "version": "3.7.6" } }, "nbformat": 4,