From fca14e7cfc3c3dab93d350f6eb6e528d696fa4ab Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Niccol=C3=B2=20Cant=C3=B9?= <niccolo.cantu@nina.no>
Date: Wed, 8 Jan 2025 14:25:53 +0100
Subject: [PATCH] add base api for konciv integration

---
 src/config/routers.py                    |  2 ++
 src/genlab_bestilling/api/serializers.py |  5 +++++
 src/genlab_bestilling/api/views.py       | 18 ++++++++++++++++--
 src/genlab_bestilling/models.py          | 16 ++++++++++++++++
 4 files changed, 39 insertions(+), 2 deletions(-)

diff --git a/src/config/routers.py b/src/config/routers.py
index ebe1dd5..24beca5 100644
--- a/src/config/routers.py
+++ b/src/config/routers.py
@@ -5,6 +5,7 @@
     SpectacularSwaggerView,
 )
 from genlab_bestilling.api.views import (
+    AnalysisTypeViewset,
     ExtractionOrderViewset,
     LocationViewset,
     MarkerViewset,
@@ -20,6 +21,7 @@
 router.register("species", SpeciesViewset, basename="species")
 router.register("markers", MarkerViewset, basename="markers")
 router.register("sample-types", SampleTypeViewset, basename="sample_types")
+router.register("analysis-types", AnalysisTypeViewset, basename="analysis_types")
 router.register("locations", LocationViewset, basename="locations")
 router.register("extraction-order", ExtractionOrderViewset, basename="extraction-order")
 
diff --git a/src/genlab_bestilling/api/serializers.py b/src/genlab_bestilling/api/serializers.py
index c8447b8..7599686 100644
--- a/src/genlab_bestilling/api/serializers.py
+++ b/src/genlab_bestilling/api/serializers.py
@@ -21,6 +21,11 @@ class EnumSerializer(serializers.Serializer):
     name = serializers.CharField()
 
 
+class KoncivSerializer(EnumSerializer):
+    type = serializers.CharField(source="konciv_type")
+    konciv_id = serializers.CharField()
+
+
 class MarkerSerializer(serializers.ModelSerializer):
     class Meta:
         model = Marker
diff --git a/src/genlab_bestilling/api/views.py b/src/genlab_bestilling/api/views.py
index 2f1f683..9be0bc4 100644
--- a/src/genlab_bestilling/api/views.py
+++ b/src/genlab_bestilling/api/views.py
@@ -15,10 +15,19 @@
     SampleTypeFilter,
     SpeciesFilter,
 )
-from ..models import ExtractionOrder, Location, Marker, Sample, SampleType, Species
+from ..models import (
+    AnalysisType,
+    ExtractionOrder,
+    Location,
+    Marker,
+    Sample,
+    SampleType,
+    Species,
+)
 from .serializers import (
     EnumSerializer,
     ExtractionSerializer,
+    KoncivSerializer,
     LocationCreateSerializer,
     LocationSerializer,
     MarkerSerializer,
@@ -160,10 +169,15 @@ def bulk_delete(self, request, pk):
 
 class SampleTypeViewset(mixins.ListModelMixin, GenericViewSet):
     queryset = SampleType.objects.all().order_by("name")
-    serializer_class = EnumSerializer
+    serializer_class = KoncivSerializer
     filterset_class = SampleTypeFilter
 
 
+class AnalysisTypeViewset(mixins.ListModelMixin, GenericViewSet):
+    queryset = AnalysisType.objects.all().order_by("name")
+    serializer_class = KoncivSerializer
+
+
 class SpeciesViewset(mixins.ListModelMixin, GenericViewSet):
     queryset = Species.objects.all().order_by("name")
     serializer_class = EnumSerializer
diff --git a/src/genlab_bestilling/models.py b/src/genlab_bestilling/models.py
index 90a7122..24bb8be 100644
--- a/src/genlab_bestilling/models.py
+++ b/src/genlab_bestilling/models.py
@@ -64,6 +64,14 @@ class SampleType(models.Model):
     def __str__(self) -> str:
         return self.name
 
+    @property
+    def konciv_id(self):
+        return f"ST_{self.id}"
+
+    @property
+    def konciv_type(self):
+        return "SAMPLE_TYPE"
+
 
 class AnalysisType(models.Model):
     name = models.CharField(max_length=255, null=True, blank=True)
@@ -71,6 +79,14 @@ class AnalysisType(models.Model):
     def __str__(self) -> str:
         return self.name
 
+    @property
+    def konciv_id(self):
+        return f"AT_{self.id}"
+
+    @property
+    def konciv_type(self):
+        return "ANALYSIS_TYPE"
+
 
 class LocationType(models.Model):
     name = models.CharField(max_length=250)