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setup.cfg
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[metadata]
name = depthcharge-ms
author = William E. Fondrie
author_email = [email protected]
description =
A deep learning toolkit for proteomics
long_description = file: README.md
long_description_content_type = text/markdown
url = https://github.com/wfondrie/depthcharge
project_urls =
Documentation = https://depthcharge.readthedocs.io
Bug Tracker = https://github.com/wfondrie/depthcharge/issues
Discussion Board = https://github.com/wfondrie/depthcharge/discussions
license = Apache 2.0
classifiers =
Programming Language :: Python :: 3
License :: OSI Approved :: Apache Software License
Operating System :: OS Independent
Topic :: Scientific/Engineering :: Bio-Informatics
[options]
packages = find:
python_requires = >=3.7
install_requires =
torch>=1.11.0
pyteomics>=4.4.2
numpy>=1.18.1
pandas>=1.0.3
numba>=0.48.0
lxml
h5py
einops
pytorch-lightning
ppx
[options.extras_require]
docs =
mkdocs
mkdocs-material
mkdocstrings
dev =
pre-commit>=2.7.1
black>=19.10b0
[options.entry_points]
console_scripts =
depthcharge = depthcharge.depthcharge:main