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Cargo.toml
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[package]
name = "minimap2"
version = "0.1.16+minimap2.2.26"
edition = "2021"
authors = ["Joseph Guhlin <[email protected]>"]
license = "MIT OR Apache-2.0"
description = "Bindings to libminimap2"
repository = "https://github.com/jguhlin/minimap2-rs"
categories = ["science"]
keywords = ["bioinformatics", "fasta", "alignment", "fastq"]
exclude = [
"**/*.fasta",
"*.profdata",
"*.mmi",
"**/*.mmi",
"/minimap2-sys/",
"/minimappers2/",
"/fakeminimap2",
"/test_data/",
".*",
]
[workspace]
members = []
exclude = [
"minimappers2",
"fakeminimap2",
"minimap2-sys"
]
[dependencies]
libc = "0.2.147"
simdutf8 = {version = "0.1.4", optional = true}
flate2 = { version = "1.0.27", default-features = false }
fffx = { version = "0.1.3", optional = true }
# Dep for development
#minimap2-sys = { path = "./minimap2-sys" }
minimap2-sys = "0.1.16"
rust-htslib = { version = "0.44.1", optional = true }
# [profile.release]
# opt-level = 3
# lto = "fat"
# codegen-units = 1
[profile.dev.package."*"]
opt-level = 3
[features]
default = ["map-file"]
mm2-fast = ["minimap2-sys/mm2-fast"]
sse2only = ["minimap2-sys/sse2only"]
htslib = ['rust-htslib']
simde = ["minimap2-sys/simde"]
map-file = ["fffx", "simdutf8"]
zlib-ng = ["minimap2-sys/zlib-ng"]
static = ["minimap2-sys/static"]
[package.metadata.docs.rs]
features = ["map-file", "htslib"]