ilifu.config

params {
    config_profile_description = """
    Ilifu (https://ilifu.ac.za) slurm cluster profile provided by nf-core/configs.
    """.stripIndent()
    config_profile_contact     = 'Peter van Heusden (@pvanheus)'
    config_profile_url         = 'https://github.com/nf-core/configs/blob/master/docs/ilifu.md'
    max_memory                 = 1500.GB
    max_cpus                   = 96
    max_time                   = 336.h
}

singularity {
    enabled    = true
    autoMounts = true
}

process {
    resourceLimits = [
        memory: 1500.GB,
        cpus: 96,
        time: 336.h
    ]
    beforeScript = """
    module load singularity
    """.stripIndent()

    executor     = 'slurm'
    queue        = { task.accelerator != null && task.accelerator.contains('nvidia') ? 'GPU' : (task.memory >= 250.GB ? 'HighMem' : 'Main') }
}