NAMESPACE

# Generated by roxygen2: do not edit by hand

export(Score_IPF_Present)
export(as_character_null)
export(check_sqlite_table)
export(curateXICplot)
export(customswitchButton)
export(getAlignObjs)
export(getAnalytes)
export(getFunctionCallArgs)
export(getListObj)
export(getMZMLpointers)
export(getMaintainer)
export(getOswAnalytes)
export(getOswFiles)
export(getRefRun)
export(getRunNames)
export(getXICs)
export(getXICs4AlignObj)
export(getmzPntrs)
export(getsqMassPntrs)
export(isListObj)
export(listTostring)
export(mapIdxToTime)
export(plotAlignedAnalytes)
export(plotAlignmentPath)
export(runDrawAlignR)
export(selectChromIndices)
export(withConsoleRedirect)
import(plotly)
import(shiny)
import(shinyBS)
import(shinyFiles)
import(shinyWidgets)
import(shinyjs)
importFrom(DBI,dbExistsTable)
importFrom(DIAlignR,getAlignObj)
importFrom(DIAlignR,getGlobalAlignment)
importFrom(MazamaCoreUtils,logger.error)
importFrom(MazamaCoreUtils,logger.info)
importFrom(MazamaCoreUtils,logger.isInitialized)
importFrom(MazamaCoreUtils,logger.trace)
importFrom(MazamaCoreUtils,logger.warn)
importFrom(crayon,blue)
importFrom(crayon,bold)
importFrom(crayon,magenta)
importFrom(crayon,red)
importFrom(crayon,underline)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,select)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,geom_contour)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,xlab)
importFrom(ggpubr,clean_theme)
importFrom(ggpubr,rotate)
importFrom(gridExtra,grid.arrange)
importFrom(mstools,codenameTounimod)
importFrom(mstools,getChromatogramDataPoints_)
importFrom(mstools,getOSWData_)
importFrom(mstools,getPepLibData_)
importFrom(mstools,getTransitionScores_)
importFrom(mstools,getXIC)
importFrom(mstools,getmzPntrs)
importFrom(mstools,getsqMassPntrs)
importFrom(mstools,log_setup)
importFrom(mstools,unimodTocodename)
importFrom(parallel,detectCores)
importFrom(parallel,mclapply)
importFrom(plotly,ggplotly)
importFrom(plotly,hide_legend)
importFrom(plotly,layout)
importFrom(scales,scientific_format)
importFrom(stringr,str_replace_all)
importFrom(tictoc,tic)
importFrom(tictoc,toc)
importFrom(zoo,na.locf)