.travis.yml

sudo: false
dist: trusty
language: python
python:
  - "2.7"
#   - "3.5"

cache:
  - apt

addons:
   apt:
      packages:
         - libcgal-dev 
         - libboost-python-dev
         - libboost-filesystem-dev 
         - libboost-test-dev 
         - libboost-system-dev
         - python-dev 
         - python-setuptools
         - python-biopython 
         - python-matplotlib 
         - python-numpy 
         - python-scipy 
         - python-matplotlib

install:
  # make sure we have the newest setuptools
  - pip install -U setuptools
  - pip install mysqlclient
  - if [[ $TRAVIS_PYTHON_VERSION == 2* ]]; then pip install pysqlite; fi
  - "cd code/test && python sqltest_tables_setup.py sqlite && cd ../.."
  - travis_retry cd code && python setup.py develop && python setup.py install

script: 
  # Disable the rpy2 tests for Python 3.x
  # Disable the Cython tests for Python 3.x as they only work under 2.x
  - if [[ $TRAVIS_PYTHON_VERSION == 2* ]]; then nosetests -a '!mysql' -w test/; fi
  ## - if [[ $TRAVIS_PYTHON_VERSION == 3.5* ]]; then nosetests -a '!mysql' -w test/; fi

cache: pip