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Update resubmit_models.R #4

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mdsage1 opened this issue Aug 29, 2023 · 0 comments
Open
4 tasks

Update resubmit_models.R #4

mdsage1 opened this issue Aug 29, 2023 · 0 comments

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@mdsage1
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mdsage1 commented Aug 29, 2023

  • Confirm this file is needed for RARE-X challenge
    [ ] Do we need to resubmit models?
  • Determine what this code block is checking:
    tasks <- list(task1 = list(old_eval = "9615023", new_eval = "9615324"),
    task2 = list(old_eval = "9615024", new_eval = "9615302"))
    admin_names <- c("scRNA-seq and scATAC-seq Data Analysis DREAM Challenge Organizers", "rchai")
  • Remove remnants of task 1 from the code
  • Determine what this code block is checking and whether its needed since the get_scores function in synapse_funcs.R already computes top performer:
    eval_id <- tasks[[task]]$old_eval
    task_sub_df <- get_ranked_submissions(syn, view_id, eval_id, phase)
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