diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml
index 294204bb0..6aebef676 100644
--- a/.github/workflows/build.yml
+++ b/.github/workflows/build.yml
@@ -26,8 +26,19 @@ on:
jobs:
+ pre-commit:
+ runs-on: ubuntu-latest
+ steps:
+ - uses: actions/checkout@v4
+ - uses: actions/setup-python@v4
+ with:
+ python-version: '3.11'
+ - uses: pre-commit/action@v3.0.0
+
+
# run unit (and integration tests if account secrets available) on our build matrix
test:
+ needs: [pre-commit]
strategy:
matrix:
@@ -39,7 +50,7 @@ jobs:
runs-on: ${{ matrix.os }}
steps:
- - uses: actions/checkout@v3
+ - uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
@@ -65,7 +76,7 @@ jobs:
${{ steps.get-dependencies.outputs.site_bin_dir }}
key: ${{ runner.os }}-${{ matrix.python }}-build-${{ env.cache-name }}-${{ hashFiles('setup.py') }}-v7
- - name: install-py-dependencies
+ - name: Install py-dependencies
if: steps.cache-dependencies.outputs.cache-hit != 'true'
shell: bash
run: |
@@ -80,11 +91,6 @@ jobs:
pip install numpy
fi
- # - name: lint
- # shell: bash
- # run: |
- # flake8
-
- name: run-unit-tests
shell: bash
run: |
@@ -138,15 +144,9 @@ jobs:
pytest -sv tests/integration/synapseclient/test_command_line_client.py
fi
- # enforce the code matches the Black code style
- lint:
- runs-on: ubuntu-latest
- steps:
- - uses: actions/checkout@v3
- - uses: psf/black@stable
# on a GitHub release, build the pip package and upload it as a GitHub release asset
package:
- needs: [test,lint]
+ needs: [test,pre-commit]
runs-on: ubuntu-20.04
@@ -157,7 +157,7 @@ jobs:
bdist-package-name: ${{ steps.build-package.outputs.bdist-package-name }}
steps:
- - uses: actions/checkout@v3
+ - uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
diff --git a/.github/workflows/codeql-analysis.yml b/.github/workflows/codeql-analysis.yml
index e154a229a..0f7354dc8 100644
--- a/.github/workflows/codeql-analysis.yml
+++ b/.github/workflows/codeql-analysis.yml
@@ -38,7 +38,7 @@ jobs:
steps:
- name: Checkout repository
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
# Initializes the CodeQL tools for scanning.
- name: Initialize CodeQL
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 10516fc3d..1565af65c 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,4 +1,5 @@
-exclude: '^docs/conf.py'
+exclude: '^docs/conf.py|^docs/build/'
+
repos:
- repo: https://github.com/pre-commit/pre-commit-hooks
diff --git a/Pipfile.lock b/Pipfile.lock
index ed7a654cc..6d63c6968 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -180,23 +180,32 @@
},
"cryptography": {
"hashes": [
- "sha256:0d7b69674b738068fa6ffade5c962ecd14969690585aaca0a1b1fc9058938a72",
- "sha256:1bd0ccb0a1ed775cd7e2144fe46df9dc03eefd722bbcf587b3e0616ea4a81eff",
- "sha256:3c284fc1e504e88e51c428db9c9274f2da9f73fdf5d7e13a36b8ecb039af6e6c",
- "sha256:49570438e60f19243e7e0d504527dd5fe9b4b967b5a1ff21cc12b57602dd85d3",
- "sha256:541dd758ad49b45920dda3b5b48c968f8b2533d8981bcdb43002798d8f7a89ed",
- "sha256:5a60d3780149e13b7a6ff7ad6526b38846354d11a15e21068e57073e29e19bed",
- "sha256:7951a966613c4211b6612b0352f5bf29989955ee592c4a885d8c7d0f830d0433",
- "sha256:922f9602d67c15ade470c11d616f2b2364950602e370c76f0c94c94ae672742e",
- "sha256:a0f0b96c572fc9f25c3f4ddbf4688b9b38c69836713fb255f4a2715d93cbaf44",
- "sha256:a777c096a49d80f9d2979695b835b0f9c9edab73b59e4ceb51f19724dda887ed",
- "sha256:a9a4ac9648d39ce71c2f63fe7dc6db144b9fa567ddfc48b9fde1b54483d26042",
- "sha256:aa4969f24d536ae2268c902b2c3d62ab464b5a66bcb247630d208a79a8098e9b",
- "sha256:c7390f9b2119b2b43160abb34f63277a638504ef8df99f11cb52c1fda66a2e6f",
- "sha256:e18e6ab84dfb0ab997faf8cca25a86ff15dfea4027b986322026cc99e0a892da"
+ "sha256:0c327cac00f082013c7c9fb6c46b7cc9fa3c288ca702c74773968173bda421bf",
+ "sha256:0d2a6a598847c46e3e321a7aef8af1436f11c27f1254933746304ff014664d84",
+ "sha256:227ec057cd32a41c6651701abc0328135e472ed450f47c2766f23267b792a88e",
+ "sha256:22892cc830d8b2c89ea60148227631bb96a7da0c1b722f2aac8824b1b7c0b6b8",
+ "sha256:392cb88b597247177172e02da6b7a63deeff1937fa6fec3bbf902ebd75d97ec7",
+ "sha256:3be3ca726e1572517d2bef99a818378bbcf7d7799d5372a46c79c29eb8d166c1",
+ "sha256:573eb7128cbca75f9157dcde974781209463ce56b5804983e11a1c462f0f4e88",
+ "sha256:580afc7b7216deeb87a098ef0674d6ee34ab55993140838b14c9b83312b37b86",
+ "sha256:5a70187954ba7292c7876734183e810b728b4f3965fbe571421cb2434d279179",
+ "sha256:73801ac9736741f220e20435f84ecec75ed70eda90f781a148f1bad546963d81",
+ "sha256:7d208c21e47940369accfc9e85f0de7693d9a5d843c2509b3846b2db170dfd20",
+ "sha256:8254962e6ba1f4d2090c44daf50a547cd5f0bf446dc658a8e5f8156cae0d8548",
+ "sha256:88417bff20162f635f24f849ab182b092697922088b477a7abd6664ddd82291d",
+ "sha256:a48e74dad1fb349f3dc1d449ed88e0017d792997a7ad2ec9587ed17405667e6d",
+ "sha256:b948e09fe5fb18517d99994184854ebd50b57248736fd4c720ad540560174ec5",
+ "sha256:c707f7afd813478e2019ae32a7c49cd932dd60ab2d2a93e796f68236b7e1fbf1",
+ "sha256:d38e6031e113b7421db1de0c1b1f7739564a88f1684c6b89234fbf6c11b75147",
+ "sha256:d3977f0e276f6f5bf245c403156673db103283266601405376f075c849a0b936",
+ "sha256:da6a0ff8f1016ccc7477e6339e1d50ce5f59b88905585f77193ebd5068f1e797",
+ "sha256:e270c04f4d9b5671ebcc792b3ba5d4488bf7c42c3c241a3748e2599776f29696",
+ "sha256:e886098619d3815e0ad5790c973afeee2c0e6e04b4da90b88e6bd06e2a0b1b72",
+ "sha256:ec3b055ff8f1dce8e6ef28f626e0972981475173d7973d63f271b29c8a2897da",
+ "sha256:fba1e91467c65fe64a82c689dc6cf58151158993b13eb7a7f3f4b7f395636723"
],
- "markers": "sys_platform == 'linux'",
- "version": "==3.3.2"
+ "markers": "python_version >= '3.7'",
+ "version": "==41.0.5"
},
"deprecated": {
"hashes": [
@@ -457,18 +466,18 @@
},
"boto3": {
"hashes": [
- "sha256:22ec3b54801c81746657827c7b1c4a3b2e4cfa7c21be3b96218d32e9390ee5eb",
- "sha256:89002e1d8411c7c54110f9f8fc4a11d57d6d7977c0cb4ba064887ca5d4c788f7"
+ "sha256:63d772a784e8e35ee51974eb1c20dff5faa51b007d22c5647783f18966bf4042",
+ "sha256:b959decd588982bc919bfcbebc7916926b05003a0093e7f2845362da4f5dd9fc"
],
- "version": "==1.28.70"
+ "version": "==1.28.75"
},
"botocore": {
"hashes": [
- "sha256:049bbf526c95b6169f59617a5ff1b0061cb7a0e44992b8c27c6955832b383988",
- "sha256:5f49def4ec2e4216dd0195d23d9811027d02ee6c8a37b031e2b2fe38e8c77ddc"
+ "sha256:d704ea9867b2227de0350bc2a5ca2543349e164ecb5d15edbfacbb05f2056482",
+ "sha256:fa078c4aa9a5777b3ede756540e62fec551e13d39cf7abf9a37bb81981496d68"
],
"markers": "python_version >= '3.7'",
- "version": "==1.31.70"
+ "version": "==1.31.75"
},
"certifi": {
"hashes": [
@@ -650,23 +659,32 @@
},
"cryptography": {
"hashes": [
- "sha256:0d7b69674b738068fa6ffade5c962ecd14969690585aaca0a1b1fc9058938a72",
- "sha256:1bd0ccb0a1ed775cd7e2144fe46df9dc03eefd722bbcf587b3e0616ea4a81eff",
- "sha256:3c284fc1e504e88e51c428db9c9274f2da9f73fdf5d7e13a36b8ecb039af6e6c",
- "sha256:49570438e60f19243e7e0d504527dd5fe9b4b967b5a1ff21cc12b57602dd85d3",
- "sha256:541dd758ad49b45920dda3b5b48c968f8b2533d8981bcdb43002798d8f7a89ed",
- "sha256:5a60d3780149e13b7a6ff7ad6526b38846354d11a15e21068e57073e29e19bed",
- "sha256:7951a966613c4211b6612b0352f5bf29989955ee592c4a885d8c7d0f830d0433",
- "sha256:922f9602d67c15ade470c11d616f2b2364950602e370c76f0c94c94ae672742e",
- "sha256:a0f0b96c572fc9f25c3f4ddbf4688b9b38c69836713fb255f4a2715d93cbaf44",
- "sha256:a777c096a49d80f9d2979695b835b0f9c9edab73b59e4ceb51f19724dda887ed",
- "sha256:a9a4ac9648d39ce71c2f63fe7dc6db144b9fa567ddfc48b9fde1b54483d26042",
- "sha256:aa4969f24d536ae2268c902b2c3d62ab464b5a66bcb247630d208a79a8098e9b",
- "sha256:c7390f9b2119b2b43160abb34f63277a638504ef8df99f11cb52c1fda66a2e6f",
- "sha256:e18e6ab84dfb0ab997faf8cca25a86ff15dfea4027b986322026cc99e0a892da"
+ "sha256:0c327cac00f082013c7c9fb6c46b7cc9fa3c288ca702c74773968173bda421bf",
+ "sha256:0d2a6a598847c46e3e321a7aef8af1436f11c27f1254933746304ff014664d84",
+ "sha256:227ec057cd32a41c6651701abc0328135e472ed450f47c2766f23267b792a88e",
+ "sha256:22892cc830d8b2c89ea60148227631bb96a7da0c1b722f2aac8824b1b7c0b6b8",
+ "sha256:392cb88b597247177172e02da6b7a63deeff1937fa6fec3bbf902ebd75d97ec7",
+ "sha256:3be3ca726e1572517d2bef99a818378bbcf7d7799d5372a46c79c29eb8d166c1",
+ "sha256:573eb7128cbca75f9157dcde974781209463ce56b5804983e11a1c462f0f4e88",
+ "sha256:580afc7b7216deeb87a098ef0674d6ee34ab55993140838b14c9b83312b37b86",
+ "sha256:5a70187954ba7292c7876734183e810b728b4f3965fbe571421cb2434d279179",
+ "sha256:73801ac9736741f220e20435f84ecec75ed70eda90f781a148f1bad546963d81",
+ "sha256:7d208c21e47940369accfc9e85f0de7693d9a5d843c2509b3846b2db170dfd20",
+ "sha256:8254962e6ba1f4d2090c44daf50a547cd5f0bf446dc658a8e5f8156cae0d8548",
+ "sha256:88417bff20162f635f24f849ab182b092697922088b477a7abd6664ddd82291d",
+ "sha256:a48e74dad1fb349f3dc1d449ed88e0017d792997a7ad2ec9587ed17405667e6d",
+ "sha256:b948e09fe5fb18517d99994184854ebd50b57248736fd4c720ad540560174ec5",
+ "sha256:c707f7afd813478e2019ae32a7c49cd932dd60ab2d2a93e796f68236b7e1fbf1",
+ "sha256:d38e6031e113b7421db1de0c1b1f7739564a88f1684c6b89234fbf6c11b75147",
+ "sha256:d3977f0e276f6f5bf245c403156673db103283266601405376f075c849a0b936",
+ "sha256:da6a0ff8f1016ccc7477e6339e1d50ce5f59b88905585f77193ebd5068f1e797",
+ "sha256:e270c04f4d9b5671ebcc792b3ba5d4488bf7c42c3c241a3748e2599776f29696",
+ "sha256:e886098619d3815e0ad5790c973afeee2c0e6e04b4da90b88e6bd06e2a0b1b72",
+ "sha256:ec3b055ff8f1dce8e6ef28f626e0972981475173d7973d63f271b29c8a2897da",
+ "sha256:fba1e91467c65fe64a82c689dc6cf58151158993b13eb7a7f3f4b7f395636723"
],
- "markers": "sys_platform == 'linux'",
- "version": "==3.3.2"
+ "markers": "python_version >= '3.7'",
+ "version": "==41.0.5"
},
"deprecated": {
"hashes": [
@@ -701,11 +719,11 @@
},
"filelock": {
"hashes": [
- "sha256:08c21d87ded6e2b9da6728c3dff51baf1dcecf973b768ef35bcbc3447edb9ad4",
- "sha256:2e6f249f1f3654291606e046b09f1fd5eac39b360664c27f5aad072012f8bcbd"
+ "sha256:521f5f56c50f8426f5e03ad3b281b490a87ef15bc6c526f168290f0c7148d44e",
+ "sha256:57dbda9b35157b05fb3e58ee91448612eb674172fab98ee235ccb0b5bee19a1c"
],
"markers": "python_version >= '3.8'",
- "version": "==3.12.4"
+ "version": "==3.13.1"
},
"flake8": {
"hashes": [
@@ -722,11 +740,11 @@
},
"identify": {
"hashes": [
- "sha256:afe67f26ae29bab007ec21b03d4114f41316ab9dd15aa8736a167481e108da54",
- "sha256:f302a4256a15c849b91cfcdcec052a8ce914634b2f77ae87dad29cd749f2d88d"
+ "sha256:7736b3c7a28233637e3c36550646fc6389bedd74ae84cb788200cc8e2dd60b75",
+ "sha256:90199cb9e7bd3c5407a9b7e81b4abec4bb9d249991c79439ec8af740afc6293d"
],
"markers": "python_version >= '3.8'",
- "version": "==2.5.30"
+ "version": "==2.5.31"
},
"idna": {
"hashes": [
@@ -924,7 +942,7 @@
"sha256:e44ccb93f30c75dfc0c3aa3ce38f33486a75ec9abadabd4e59f114994a9c4617",
"sha256:e509cbc488c735b43b5ffea175235cec24bbc57b227ef1acc691725beb230d1c"
],
- "markers": "python_version < '3.10'",
+ "markers": "python_version >= '3.10'",
"version": "==1.26.1"
},
"packaging": {
@@ -1332,22 +1350,6 @@
"markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
"version": "==0.10.2"
},
- "tomli": {
- "hashes": [
- "sha256:939de3e7a6161af0c887ef91b7d41a53e7c5a1ca976325f429cb46ea9bc30ecc",
- "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"
- ],
- "markers": "python_version < '3.11'",
- "version": "==2.0.1"
- },
- "typing-extensions": {
- "hashes": [
- "sha256:8f92fc8806f9a6b641eaa5318da32b44d401efaac0f6678c9bc448ba3605faa0",
- "sha256:df8e4339e9cb77357558cbdbceca33c303714cf861d1eef15e1070055ae8b7ef"
- ],
- "markers": "python_version < '3.11'",
- "version": "==4.8.0"
- },
"tzdata": {
"hashes": [
"sha256:11ef1e08e54acb0d4f95bdb1be05da659673de4acbd21bf9c69e94cc5e907a3a",
diff --git a/docs/build/html/.buildinfo b/docs/build/html/.buildinfo
index fa3d336b1..e2c49c82a 100644
--- a/docs/build/html/.buildinfo
+++ b/docs/build/html/.buildinfo
@@ -1,4 +1,4 @@
# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: e61f33e16f39e8cbda346a2c639c4799
+config: 90d422e4b09fda20663a5d255dc16438
tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/build/html/_static/documentation_options.js b/docs/build/html/_static/documentation_options.js
index 5a7903e99..056ece08f 100644
--- a/docs/build/html/_static/documentation_options.js
+++ b/docs/build/html/_static/documentation_options.js
@@ -1,6 +1,6 @@
var DOCUMENTATION_OPTIONS = {
URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
- VERSION: '3.1.0',
+ VERSION: '3.1.1',
LANGUAGE: 'None',
COLLAPSE_INDEX: false,
BUILDER: 'html',
diff --git a/docs/build/html/api/Activity.html b/docs/build/html/api/Activity.html
index 32e51be25..3155a0ed4 100644
--- a/docs/build/html/api/Activity.html
+++ b/docs/build/html/api/Activity.html
@@ -4,7 +4,7 @@
- Provenance — Synapse Python Client 3.1.0 documentation
+ Provenance — Synapse Python Client 3.1.1 documentation
@@ -37,7 +37,7 @@
- 3.1.0
+ 3.1.1
@@ -268,7 +268,7 @@ ActivitySage Bionetworks.
- Last updated on Oct 23, 2023.
+ Last updated on Oct 30, 2023.
Created using Sphinx 4.5.0.