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Hi,
Super helpful tools! Here is my question:
When I annotate the human spleen dataset using the immune_ALL_High_model, I get the figure below. I noticed that a portion of the fibroblast cells remains unassigned. I'm wondering what could be the reason for this. I might think is the different property of fibroblast, so I checked the relevant scientific paper, but it doesn't mention any stromal cells. So, where do the trained fibroblasts originate from, and what is the tissue source in this case?
Ziwei
The text was updated successfully, but these errors were encountered:
@echovv, Fibroblasts and other non-immune cells act as umbrella categories to provide flexibility for annotating potential non-immune cells in the query data. Fibroblasts used in the training data are from thymus.
Hi,
Super helpful tools! Here is my question:
When I annotate the human spleen dataset using the immune_ALL_High_model, I get the figure below. I noticed that a portion of the fibroblast cells remains unassigned. I'm wondering what could be the reason for this. I might think is the different property of fibroblast, so I checked the relevant scientific paper, but it doesn't mention any stromal cells. So, where do the trained fibroblasts originate from, and what is the tissue source in this case?
Ziwei
The text was updated successfully, but these errors were encountered: