DESCRIPTION

Package: CAMDAC
Title: Copy-number Aware Methylation Deconvolution and Analysis of Cancers
Version: 0.1.0
Authors@R: 
    c(
    person(given = "Elizabeth",
           family = "Larose Cadieux",
           role = c("aut")),
    person(given = "Nana",
           family = "Mensah",
           role = c("aut", "cre"),
           email="nana.mensah@crick.ac.uk"),
    person(given = "Carla",
           family = "Castignani",
           role = c("aut")),
    person(given = "Jonas",
           family = "Demeulemeester",
           role = c("aut")),
    person(given = "Peter",
           family = "Van Loo",
           role = c("aut", "fnd"))
    )
Description: What the package does (one paragraph).
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.2
Suggests: 
    testthat (>= 3.0.0),
    devtools,
    pryr,
    tictoc,
    mockr,
    tidyr,
    knitr,
    rmarkdown,
    pkgdown,
    usethis
biocViews:
Imports: 
    optparse,
    logger
Depends: 
    R (>= 3.6.2),
    ASCAT,
    stringr,
    GenomicRanges,
    GenomicAlignments,
    Rsamtools,
    scales,
    ggplot2,
    gridExtra,
    gtable,
    data.table,
    readr,
    dplyr,
    parallel,
    doParallel,
    devtools,
    fst,
    fs,
    png,
    grid
Remotes: 
    ASCAT=VanLoo-Lab/ascat/ASCAT@v2.5.3,
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/testthat/start-first: test_download*