NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(print,methylInheritanceAllResults)
export(calculateSignificantLevel)
export(extractInfo)
export(loadAllRDSResults)
export(loadConvergenceData)
export(mergePermutationAndObservation)
export(plotConvergenceGraph)
export(plotGraph)
export(runObservation)
export(runPermutation)
importFrom(BiocParallel,MulticoreParam)
importFrom(BiocParallel,SnowParam)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpok)
importFrom(BiocParallel,bptry)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,intersect)
importFrom(GenomicRanges,width)
importFrom(IRanges,IRanges)
importFrom(S4Vectors,"values<-")
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,isSingleInteger)
importFrom(S4Vectors,isSingleNumber)
importFrom(S4Vectors,values)
importFrom(ggplot2,aes)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(gridExtra,grid.arrange)
importFrom(gridExtra,tableGrob)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methylKit,calculateDiffMeth)
importFrom(methylKit,filterByCoverage)
importFrom(methylKit,getData)
importFrom(methylKit,getMethylDiff)
importFrom(methylKit,methRead)
importFrom(methylKit,normalizeCoverage)
importFrom(methylKit,tileMethylCounts)
importFrom(methylKit,unite)
importFrom(parallel,mclapply)
importFrom(parallel,nextRNGSubStream)
importFrom(rebus,number_range)