-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy path101206MeasureIntesity.cp
29 lines (27 loc) · 1.38 KB
/
101206MeasureIntesity.cp
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
CellProfiler Pipeline: http://www.cellprofiler.org
Version:1
SVNRevision:9978
LoadImages:[module_num:1|svn_version:\'9976\'|variable_revision_number:6|show_window:False|notes:\x5B\x5D]
File type to be loaded:individual images
File selection method:Text-Exact match
Number of images in each group?:3
Type the text that the excluded images have in common:Do not use
Analyze all subfolders within the selected folder?:No
Input image file location:Default Input Folder\x7CNone
Check image sets for missing or duplicate files?:Yes
Group images by metadata?:No
Exclude certain files?:No
Specify metadata fields to group by:
Image count:1
Text that these images have in common (case-sensitive):w2.TIF
Position of this image in each group:1
Extract metadata from where?:None
Regular expression that finds metadata in the file name:^(?P<Plate>.*)_(?P<Well>\x5BA-P\x5D\x5B0-9\x5D{2})_s(?P<Site>\x5B0-9\x5D)
Type the regular expression that finds metadata in the subfolder path:.*\x5B\\\\/\x5D(?P<Date>.*)\x5B\\\\/\x5D(?P<Run>.*)$
Channel count:1
Name this loaded image:GFP
Channel number\x3A:1
MeasureImageIntensity:[module_num:2|svn_version:\'9842\'|variable_revision_number:2|show_window:False|notes:\x5B\x5D]
Select the image to measure:GFP
Measure the intensity only from areas enclosed by objects?:No
Select the input objects:None