From 263f0e76323140e7fad89cd2e7dc659ac5163153 Mon Sep 17 00:00:00 2001 From: Sam Horsfield Date: Wed, 3 Apr 2024 17:13:58 +0100 Subject: [PATCH] Adds docker guide --- config.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/config.yaml b/config.yaml index d25a557..17e3980 100644 --- a/config.yaml +++ b/config.yaml @@ -12,8 +12,8 @@ cgt_exe: /path/to/cgt/exe cgt_breaks: 0.05,0.95 cgt_error: 0.05 -# choice of clustering method, either 'mmseqs2' or 'panaroo' +# choice of clustering method, either "mmseqs2" or "panaroo" clustering_method: "panaroo" -# must be one of 'strict', 'moderate' or 'sensitive' +# must be one of "strict", "moderate" or "sensitive" panaroo_stringency: "strict" \ No newline at end of file