ReleaseNotes

BEAGLE release notes

version 3.0.0

• Improved performance for partitioned data sets;
• Improved performance for large trees with short alignments;
• Improved performance for default CPU implementation, via use of threading;
• Several bug fixes.

version 2.1.2

• Fixed OS X binary release issue with GNU libtool shared library dependency.

version 2.1.1

• Fixed OS X binary release compatibility with system versions 10.6, 10.7, and 10.8.

version 2.1

• Support for OpenCL on CPU for Apple devices
• SSE and CUDA plugins for Windows reintroduced
• Windows installer detects previous versions and removes them automatically
• Other bug fixes, including ones that affected OpenCL performance

version 2.0

• OpenCL support for GPUs, including AMD, and CPUs (multicore and vectorisation)
• Multi-epoch substitution models
• Bug fixes and performance improvements

version 1.0

• Initial release