From f720d749d41b9392c2ac6b57dfbb51cf41fd8200 Mon Sep 17 00:00:00 2001 From: esgomezm Date: Fri, 10 May 2024 20:29:17 +0200 Subject: [PATCH] change data path --- notebooks/.ipynb_checkpoints/KaibuInterface-checkpoint.ipynb | 4 ++-- notebooks/KaibuInterface.ipynb | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/notebooks/.ipynb_checkpoints/KaibuInterface-checkpoint.ipynb b/notebooks/.ipynb_checkpoints/KaibuInterface-checkpoint.ipynb index 7479150..ca9c09c 100644 --- a/notebooks/.ipynb_checkpoints/KaibuInterface-checkpoint.ipynb +++ b/notebooks/.ipynb_checkpoints/KaibuInterface-checkpoint.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": 2, + "execution_count": 3, "id": "69ebb748-9189-4443-a427-913d3a5ee6ce", "metadata": {}, "outputs": [ @@ -22,7 +22,7 @@ "from tifffile import imread, imsave\n", "from kaibu_utils import fetch_image, features_to_mask\n", "\n", - "path2data = \"/Users/esti/Documents/PROYECTOS/BIOIMAGEIO/bioimageio-colab/data/BT474_Phase\"\n", + "path2data = \"/Users/esti/Documents/PROYECTOS/BIOIMAGEIO/bioimageio-colab/data/u2os-leica-collective-cropped\"\n", "outpath = \"/Users/esti/Documents/PROYECTOS/BIOIMAGEIO/bioimageio-colab/data/kaibu_output\"\n", "os.makedirs(outpath, exist_ok=True)\n", "\n", diff --git a/notebooks/KaibuInterface.ipynb b/notebooks/KaibuInterface.ipynb index 0c58a69..ca9c09c 100644 --- a/notebooks/KaibuInterface.ipynb +++ b/notebooks/KaibuInterface.ipynb @@ -22,7 +22,7 @@ "from tifffile import imread, imsave\n", "from kaibu_utils import fetch_image, features_to_mask\n", "\n", - "path2data = \"/Users/esti/Documents/PROYECTOS/BIOIMAGEIO/bioimageio-colab/data/BT474_Phase\"\n", + "path2data = \"/Users/esti/Documents/PROYECTOS/BIOIMAGEIO/bioimageio-colab/data/u2os-leica-collective-cropped\"\n", "outpath = \"/Users/esti/Documents/PROYECTOS/BIOIMAGEIO/bioimageio-colab/data/kaibu_output\"\n", "os.makedirs(outpath, exist_ok=True)\n", "\n",