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BFit2.cxx
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/*
2013-12-07 Shane Caldwell
Made from fit_beta_singles.cxx.
Will modify as necessary to validate against B_monte_carlo output.
2014-02-26
Making a standalone C++ version of B_fit.cpp, which is a ROOT program.
Big difference: this program does not output plots to screen. Instead it saves them to a
subdirectory of the ROOT file that is given to it.
2014-06-29
Just now noting this: Program now (as of like easrly March) uses the CSVtoStruct.h/cxx
*/
#include <unistd.h>
#include "stdio.h"
#include <iostream>
#include <iomanip>
#include <cstring>
#include "time.h"
#include "TROOT.h"
#include "TString.h"
#include "TStyle.h"
#include "TMath.h"
#include "TFitResult.h"
#include "TMatrixDSym.h"
#include "TFile.h"
#include "TF1.h"
#include "TH1.h"
#include "TCanvas.h"
#include "TLegend.h"
#include "TPaveStats.h"
#include "Fit/FitConfig.h"
#include "TVirtualFitter.h"
//#include "include/bdn.h"
//#include "include/sb135.h"
//#include "bdn_cases.h"
#include "bdnHistograms.h"
#include "CSVtoStruct.h"
#include "BFit2Model.h"
using namespace std;
//#include "TVirtualFitter.h"
/////////////////////////////////////////////////////////////////////////////
// Global variables
/////////////////////////////////////////////////////////////////////////////
// Structs
BDNCase_t stBDNCases[FILE_ROWS_BDN];
BFitCase_t stBFitCases[FILE_ROWS_BFit];
Int_t iBDNCaseIndex, iBFitCaseIndex; // global index to identify case
Int_t iNumStructs_BDN, iNumStructs_BFit;
namespace BFitNamespace {
char parNames[30][5] = {"nCyc", "dt", "DC", "r1", "r2", "r3", "p", "rho", "epsT", "epsU", "epsV", "epsW", "epsX", "epsY", "epsZ", "gT1", "gT2", "gT3", "gU1", "gU2", "gU3"};
Double_t rateScale = 0.001; // scale down rates to help Hessian matrix inversion
// These never change during fitting and are set in BFit()
Int_t nPars; // number of model parameters
Double_t iota; // tiny number for avoiding divide-by-0
Double_t tCap, tBac, tCyc; // cycle times
Double_t t1, t2, t3; // radioactive half-lives
//Double_t tZeroArg[1], tCycArg[1]; // specifc time values 1-element array for passing by reference
Int_t nCycles; // number of cycles in dataset -- don't confuse with parameter indec nCyc
Int_t nCapMax; // number of injections per cycle
bool b134sbFlag = 0; // flag for 134sb cases which get special treatment
bool bEpsXEqualsEpsYFlag = 0; // flag for forcing epsX := epsY
// These change only when the parameters change during fitting and are set in yAll()
Int_t nParChanges; // counts # of times pars have changed
Double_t *lastPar; // holds most recent paramter values for comparison
Double_t tT1, tT2, tT3, tU1, tU2, tU3; // modified lifetimes
Double_t aT1, aT2, aT3, aU1, aU2, aU3; // Decay factors for one capture interval tCap
Double_t eU1tCyc, eU2tCyc, eU3tCyc; // background decay at end of cycle: exp(-tCyc/tU1), ...
Double_t tT1U2, tT1U3, tU1U2, tU1U3, tT2U3, tU2U3; // Coefficients used in Y2 and Y3
Double_t cT1, cU1, cU2, cZT2, cZU2, cZU3, cXT1, cXU2, cXU3, cYU1, cYU2, cYU3, ThetaU, ThetaY; // various products of lifetimes
//Double_t ST1_1cap, SW11_1cap, SZ11_1cap, ST2_1cap, SW22_1cap, SZ12_1cap, SZ22_1cap; // specific values of the SigmaT, SigmaW, and SigmaZ functions
Double_t *sigmaT1, *sigmaT2, *sigmaT3;
Double_t *sigmaV1, *sigmaV2, *sigmaV3;
Double_t *sigmaW1, *sigmaW2, *sigmaW3;
Double_t *sigmaZ1, *sigmaZ2, *sigmaZ3;
Double_t *sigmaX2, *sigmaX3;
Double_t *sigmaY2, *sigmaY3;
Double_t *sY2v1, *sY2w1, *sY2z1;
Double_t *sY3v2, *sY3w2, *sY3z2, *sY3x2, *sY3v1, *sY3w1, *sY3z1;
Double_t *timeOfCapt;
Double_t Gamma_T1_U2, Gamma_T2_U3;
Double_t Gamma_U1_U2, Gamma_U2_U3;
Double_t *I_V1_Y2, *I_V2_Y3;
Double_t *I_W1_Y2, *I_W2_Y3;
Double_t *I_Z1_Y2, *I_Z2_Y3;
Double_t *I_X1_Y2, *I_X2_Y3;
Double_t *I_Y2_Y3;
Double_t *Y2InitialValues, *Y3InitialValues;
Double_t ampT1, ampT2, ampT3; // amplitudes of the T pops
Double_t ampV1, ampV2, ampV3; // amplitudes of the V pops
Double_t ampW1, ampW2, ampW3; // amplitudes of the W pops
Double_t ampZ1, ampZ2, ampZ3; // amplitudes of the Z pops
Double_t ampX2, ampX3; // amplitudes of the X pops
Double_t ampY2ptA, ampY2ptB; // amplitudes for Y2
Double_t ampY3fromV2, ampY3fromW2, ampY3fromZ2, ampY3fromX2, ampY3fromY2_ST1, ampY3fromY2_SW11, ampY3fromY2_SZ11; // amplitudes for Y3
Double_t V10, V20, V30, W10, W20, W30, Z10, Z20, Z30, X20, X30, Y20, Y30, U10, U20, U30; // initial value (t=0) for each pop
// These change for every function call and are set in yAll()
Int_t nCap; // current injection number
Double_t eU10, eU20, eU30; // decay from t=0 for background parts: exp(-t/tT1), ...
Double_t eT1nCap, eT2nCap, eT3nCap, eU1nCap, eU2nCap, eU3nCap; // decay from last injection for capture parts: exp(-(t-tB-(nCap-1)*tA)/tT1), ...
Double_t T1val, T2val, T3val, U1val, U2val, U3val, V1val, V2val, V3val, W1val, W2val, W3val, Z1val, Z2val, Z3val, X2val, X3val, Y2val, Y3val; // value of each pop
/////////////////////////////////////////////////////////////////////////////
Int_t sema = 0;
}
// Functions
Double_t intErr (TF1*, Double_t*, Double_t, Double_t);
void HistPrep (TH1*, Int_t, Int_t, char*);
void FuncPrep (TF1*, Double_t*, Int_t, Int_t, Int_t);
int BFit ();
// MAIN FUNCTION
int main (int argc, char *argv[]) {
time_t tm = time(NULL);
cout << "Timestamp = " << asctime(localtime(&tm));
char *csvBDNCases, *csvBFitCases;
csvBDNCases = "BDNCases.csv_transposed";
csvBFitCases = "BFitCases.csv_transposed";
cout << endl << "Importing metadata from CSV files..." << endl;
iNumStructs_BDN = CSVtoStruct_BDN (csvBDNCases, stBDNCases);
cout << "Imported " << iNumStructs_BDN << " BDN cases" << endl;
iNumStructs_BFit = CSVtoStruct_BFit (csvBFitCases, stBFitCases);
cout << "Imported " << iNumStructs_BFit << " BFit cases" << endl;
iBDNCaseIndex = FindStructIndex ( stBDNCases, sizeof(BDNCase_t), iNumStructs_BDN, argv[1] );
iBFitCaseIndex = FindStructIndex ( stBFitCases, sizeof(BFitCase_t), iNumStructs_BFit, argv[2] );
if ( iBDNCaseIndex == -1 || iBFitCaseIndex == -1 )
{ // One of the read-ins failed and already printed a message about it
cout << "How to run this program:" << endl;
cout << "'./BFit <BDN case code> <B_fit case code>'" << endl;
cout << "where valid case codes are listed in the CSV files." << endl << endl;
return -1; // error return
}
cout << "Performing BFit with BDN case " << stBDNCases[iBDNCaseIndex].pcsCaseCode << " and BFit case " << stBFitCases[iBFitCaseIndex].pcsCaseCode << endl << endl;
return BFit(); // return status of BFit
}
int BFit () {
// Timer for debugging code
clock_t timer, timerStart, timerStop;
timerStart = clock();
cout << "BFit started. Timer = "<< (Float_t)timerStart/CLOCKS_PER_SEC << " sec." << endl;
int iReturn = SUCCESS;
using namespace BFitNamespace;
using namespace TMath;
TFile *outfile = new TFile("BFit.root","recreate");
// Local copies of the relevant metadata structs
BDNCase_t stBDNCase = stBDNCases[iBDNCaseIndex];
BFitCase_t stBFitCase = stBFitCases[iBFitCaseIndex];
//printf("Bdn Case index = %d, BFit case index = %d\n", iBDNCaseIndex, iBFitCaseIndex);
// Assign global variables
nPars = stBFitCase.iNPars;
tCap = 1000.0 * stBDNCase.dCaptureTime; // Time between BPT captures (ms)
tBac = 1000.0 * stBDNCase.dBackgroundTime; // Time spent in background measurment, per cycle (ms)
tCyc = 1000.0 * stBDNCase.dCycleTime; // Time between BPT ejections (ms)
t1 = 1000.0 * stBDNCase.dLifetime1[0]; // radioactive lifetime (1/e) in ms
t2 = 1000.0 * stBDNCase.dLifetime2[0]; // radioactive lifetime (1/e) in ms
t3 = 1000.0 * stBDNCase.dLifetime3[0]; // radioactive lifetime (1/e) in ms
nCycles = stBDNCase.nCycles; // Number of cycles in dataset
iota = 0.0000000001;
// printf(" iota = %.4e\n",iota);
// printf(" iota = %32.16f\n",iota);
// printf("1000000 + iota = %32.16f\n",1000000+iota);
// return 0;
nCapMax = Ceil((tCyc-tBac)/tCap);
//printf("nCapMax=%d\n",nCapMax);
// Array to hold injection times
timeOfCapt = new Double_t [nCapMax+1];
Int_t k;
for (k=0; k<nCapMax+1; k++)
timeOfCapt[k] = tBac + k*tCap;
// Arrays to hold the sigma values in each [index] tooth:
// Zero index not used (+1 element), for notational consistency
sigmaT1 = new Double_t [nCapMax+1];
sigmaT2 = new Double_t [nCapMax+1];
sigmaT3 = new Double_t [nCapMax+1];
sigmaV1 = new Double_t [nCapMax+1];
sigmaV2 = new Double_t [nCapMax+1];
sigmaV3 = new Double_t [nCapMax+1];
sigmaW1 = new Double_t [nCapMax+1];
sigmaW2 = new Double_t [nCapMax+1];
sigmaW3 = new Double_t [nCapMax+1];
sigmaZ1 = new Double_t [nCapMax+1];
sigmaZ2 = new Double_t [nCapMax+1];
sigmaZ3 = new Double_t [nCapMax+1];
sigmaX2 = new Double_t [nCapMax+1];
sigmaX3 = new Double_t [nCapMax+1];
sigmaY2 = new Double_t [nCapMax+1];
sigmaY3 = new Double_t [nCapMax+1];
sY2v1 = new Double_t [nCapMax+1];
sY2w1 = new Double_t [nCapMax+1];
sY2z1 = new Double_t [nCapMax+1];
sY3v2 = new Double_t [nCapMax+1];
sY3w2 = new Double_t [nCapMax+1];
sY3z2 = new Double_t [nCapMax+1];
sY3x2 = new Double_t [nCapMax+1];
sY3v1 = new Double_t [nCapMax+1];
sY3w1 = new Double_t [nCapMax+1];
sY3z1 = new Double_t [nCapMax+1];
sigmaT1[0] = sigmaT2[0] = sigmaT3[0] = 0.0; // zero index not used -- set to zero for definiteness
sigmaV1[0] = sigmaV2[0] = sigmaV3[0] = 0.0; // zero index not used -- set to zero for definiteness
sigmaW1[0] = sigmaW2[0] = sigmaW3[0] = 0.0; // zero index not used -- set to zero for definiteness
sigmaZ1[0] = sigmaZ2[0] = sigmaZ3[0] = 0.0; // zero index not used -- set to zero for definiteness
sigmaX2[0] = sigmaX3[0] = 0.0; // zero index not used -- set to zero for definiteness
sigmaY2[0] = sigmaY3[0] = 0.0; // zero index not used -- set to zero for definiteness
sY2v1[0] = sY2w1[0] = sY2z1[0] = 0.0; // zero index not used -- set to zero for definiteness
sY3v2[0] = sY3w2[0] = sY3z2[0] = sY3x2[0] = 0.0; // zero index not used -- set to zero for definiteness
sY3v1[0] = sY3w1[0] = sY3z1[0] = 0.0; // zero index not used -- set to zero for definiteness
// Print message
TString separator = "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~";
cout << endl << separator << endl;
cout << "BETA SINGLES MODEL" << endl << separator << endl;
cout << "BDN Case: " << stBDNCase.pcsCaseCode << endl;
cout << "BFit Case: " << stBFitCase.pcsCaseCode << endl;
cout << "File: " << stBDNCase.pcsFilePath << endl;
cout << "Histogram: " << stBFitCase.pcsHistName << endl;
printf("Total cycle time\t= %10.3f s\n", stBDNCase.dCycleTime);
printf("Background time\t\t= %10.3f s\n", stBDNCase.dBackgroundTime);
printf("Capture cycle time\t= %10.3f s\n", stBDNCase.dCaptureTime);
printf("Last capture time\t= %10.3f s\n", stBDNCase.dLastCaptureTime);
cout << stBDNCase.pcsSpecies1Name; printf(" halflife\t\t= %10.3f s (lifetime %10.3f s)\n", stBDNCase.dHalfLife1[0], stBDNCase.dLifetime1[0]);
cout << stBDNCase.pcsSpecies2Name; printf(" halflife\t\t= %10.3f s (lifetime %10.3f s)\n", stBDNCase.dHalfLife2[0], stBDNCase.dLifetime2[0]);
cout << stBDNCase.pcsSpecies3Name; printf(" halflife\t\t= %10.3f s (lifetime %10.3f s)\n", stBDNCase.dHalfLife3[0], stBDNCase.dLifetime3[0]);
cout << separator << endl;
// Get histogram from ROOT file
TFile *f = new TFile(stBDNCase.pcsFilePath);
TH1D *h = (TH1D*)f->Get(stBFitCase.pcsHistName);
Double_t dBinWidth = stBFitCase.pdSeed[dt];
Double_t dNBins = tCyc/dBinWidth;// # of bins covered by funtion //h->GetNbinsX();
Double_t pointsPerBin = dBinWidth;//20;
Double_t nPoints = pointsPerBin * dNBins;
Double_t dRebinFactor = dBinWidth/(h->GetBinWidth(1));
// printf("dBinWidth=%f, GetBinWidth=%f, dRebinFactor=%f\n", dBinWidth, h->GetBinWidth(1), dRebinFactor);
// Double_t dRebinFactor = stBFitCase.iBinWidth/(h->GetBinWidth(1));
Double_t binZero = (1.0/dRebinFactor)*(0.0 - tCycMin) + 1.0;
Double_t binCap = (1.0/dRebinFactor)*(tBac - tCycMin) + 1.0;
Double_t binCycle = (1.0/dRebinFactor)*(tCyc - tCycMin) + 1.0;
TH1D *h1 = (TH1D*)h->Rebin(dRebinFactor,stBFitCase.pcsHistName);
TH1D *h2 = (TH1D*)h->Rebin(dRebinFactor,stBFitCase.pcsHistName);
cout << "HISTOGRAM REBINNED" << endl;
cout << " Number of hist bins = " << dNBins << endl;
cout << " Number of fn points = " << nPoints << endl;
cout << " Number of pts/bin = " << pointsPerBin << endl;
cout << separator << endl;
if (stBFitCase.bDoFit) cout << "Doing fit with option string: " << stBFitCase.pcsOptions << endl;
else cout << "Not fitting! Drawing functions using parameter seed values." << endl;
cout << separator << endl;
// Define functions
// Double_t tMax = 1000.0 * stBDNCase.dCycleTime;
// Species populations
TF1 *fyDC = new TF1("fyDC", yDC, 0.0, tCyc, nPars);
TF1 *fyT1 = new TF1("fyT1", yT1, 0.0, tCyc, nPars);
TF1 *fyT2 = new TF1("fyT2", yT2, 0.0, tCyc, nPars);
TF1 *fyT3 = new TF1("fyT3", yT3, 0.0, tCyc, nPars);
TF1 *fyU1 = new TF1("fyU1", yU1, 0.0, tCyc, nPars);
TF1 *fyU2 = new TF1("fyU2", yU2, 0.0, tCyc, nPars);
TF1 *fyU3 = new TF1("fyU3", yU3, 0.0, tCyc, nPars);
//**************************************************************************
// This one fits the data:
TF1 *fyAll = new TF1("fyAll",yAll, 0.0, tCyc, nPars);
//TF1 *fyAll = new TF1("fyAll",yAll, tBac, tCyc, nPars);
//TF1 *fyAll = new TF1("fyAll",yAll, 30100.0, 36000.0, nPars);
//**************************************************************************
// Beta rates to be used by TF1::Integral() and TF1::IntegralError()
TF1 *frDC = new TF1("frDC", rDC, 0.0, tCyc, nPars);
TF1 *frT1 = new TF1("frT1", rT1, 0.0, tCyc, nPars);
TF1 *frT2 = new TF1("frT2", rT2, 0.0, tCyc, nPars);
TF1 *frT3 = new TF1("frT3", rT3, 0.0, tCyc, nPars);
TF1 *frU1 = new TF1("frU1", rU1, 0.0, tCyc, nPars);
TF1 *frU2 = new TF1("frU2", rU2, 0.0, tCyc, nPars);
TF1 *frU3 = new TF1("frU3", rU3, 0.0, tCyc, nPars);
TF1 *frAll = new TF1("frAll",rAll, 0.0, tCyc, nPars);
// Offset functions for plotting
TF1 *foT1 = new TF1("foT1", oT1, 0.0, tCyc, nPars);
TF1 *foT2 = new TF1("foT2", oT2, 0.0, tCyc, nPars);
TF1 *foT3 = new TF1("foT3", oT3, 0.0, tCyc, nPars);
TF1 *foU1 = new TF1("foU1", oU1, 0.0, tCyc, nPars);
TF1 *foU2 = new TF1("foU2", oU2, 0.0, tCyc, nPars);
TF1 *foU3 = new TF1("foU3", oU3, 0.0, tCyc, nPars);
// Initiailize function to fit the data
char pcsLifetime1ParName[100]; sprintf(pcsLifetime1ParName,"%s radioactive lifetime (1/e)", stBDNCase.pcsSpecies1Name);
char pcsLifetime2ParName[100]; sprintf(pcsLifetime2ParName,"%s radioactive lifetime (1/e)", stBDNCase.pcsSpecies2Name);
char pcsLifetime3ParName[100]; sprintf(pcsLifetime3ParName,"%s radioactive lifetime (1/e)", stBDNCase.pcsSpecies3Name);
fyAll->SetParName(nCyc,"# Cyc's");
fyAll->SetParName(DC,"DC rate");
fyAll->SetParName(r1,"Rate 1");
fyAll->SetParName(r2,"Rate 2");
fyAll->SetParName(r3,"Rate 3");
fyAll->SetParName(p,"Capt eff");
fyAll->SetParName(rho,"Capt ret");
fyAll->SetParName(epsT,"T eff");
fyAll->SetParName(epsU,"U eff");
fyAll->SetParName(epsV,"V eff");
fyAll->SetParName(epsW,"W eff");
fyAll->SetParName(epsX,"X eff");
fyAll->SetParName(epsY,"Y eff");
fyAll->SetParName(epsZ,"Z eff");
// fyAll->SetParName(tau1,pcsLifetime1ParName);//"Lifetime 1");//pcsSpecies1ParName);
// fyAll->SetParName(tau2,pcsLifetime2ParName);//"Lifetime 2");//pcsSpecies2ParName);
// fyAll->SetParName(tau3,pcsLifetime3ParName);//"Lifetime 3");//pcsSpecies3ParName);
fyAll->SetParName(gammaT1,"T1 loss");
fyAll->SetParName(gammaT2,"T2 loss");
fyAll->SetParName(gammaT3,"T3 loss");
fyAll->SetParName(gammaU1,"U1 loss");
fyAll->SetParName(gammaU2,"U2 loss");
fyAll->SetParName(gammaU3,"U3 loss");
fyAll->SetParName(dt,"Bin width");
// Initial parameter values and initial step sizes
// err contains initial step sizes now, will contain error estimates later.
Int_t *tog;
Double_t *par;
Double_t *err;
tog = stBFitCase.pbToggle;
par = stBFitCase.pdSeed;
err = stBFitCase.pdStep;
Int_t index;
par[nCyc] = nCycles;
// Avoid removable discontinuity in Z pops from gammaTi==gammaUi
par[gammaU1] += 2*iota;
par[gammaU2] += 2*iota;
par[gammaU3] += 2*iota;
// Parameter transformations to help fitting
for (index = 0; index < nPars; index++) {
//if (index == DC || index == r1 || index == r2 || index == r3) {
if (index == r1 || index == r2 || index == r3) { // removed DC ... doesn't seem to work
par[index] *= rateScale;
err[index] *= rateScale;
}
if (index == epsT || index == epsV || index == epsW || index == epsX || index == epsY || index == epsZ)
par[index] = 1.0 - par[index];
// Not working yet... No transform on gammas
// if (index == gammaT1 || index == gammaT2 || index == gammaT3 || index == gammaU1 || index == gammaU2 || index == gammaU3) {
// // par[index] = 100.0 * par[index];
// // par[index] = 1.0 - par[index];
// par[index] = 1.0 + Log(1.0+par[index]);
// }
}
// Special cases -- modifications to parameters -- catch right after param import
if (stBFitCase.bEpsXEqualsEpsY)
{
bEpsXEqualsEpsYFlag = 1;
par[epsX] = par[epsY];
tog[epsX] = 0;
}
if (!strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb01") ||
!strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb02") ||
!strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb03") ||
!strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb0103"))
{
b134sbFlag = 1;
par[gammaT3] = par[gammaT2];
}
// Initialize global lastPar to values that guarantee computation of parameter-dependent variables in first eval of yAll
lastPar = new Double_t [nPars];
memcpy(lastPar,par,nPars*sizeof(Double_t));
// printf("\n\n[lastPar = %f, %f, %f, ...]\n\n",lastPar[0],lastPar[1],lastPar[2]);
// for (index = 0; index < nPars; index++) lastPar[index] = -1.0;
// Initialize parameter-dependent variables
BFitNamespace::ComputeParameterDependentVars(par);
// Place initial par values into fitting function
// Reduce rate params to agree in size with others, to help Hessian matrix inversion
//for (index = 0; index < nPars; index++) {
// if (index == DC || index == r1 || index == r2 || index == r3) {
// fyAll->SetParameter(index,rateScale*par[index]);
// fyAll->SetParError(index,rateScale*err[index]);
// }
// else {
// fyAll->SetParameter(index,par[index]);
// fyAll->SetParError(index,err[index]);
// }
//}
fyAll->SetParameters(par);
fyAll->SetParErrors(err);
//if (stBFitCase.pbToggle[rho]) fyAll->SetParLimits(rho,0,1);
//fyAll->SetParLimits(gammaT1,-0.2,0.2);
//fyAll->SetParLimits(r2,-100,1e4);
//fyAll->SetParLimits(epsV,-1,1);
//fyAll->SetParLimits(gammaT2,0,0.1);
// Print seed values that are assigned to the fit function
cout << "PARAMETER SEED VALUES" << endl << separator << endl;
cout << setw(14) << "Par name" << setw(10) << "Varying?" << "\t" << "Par init val and step" << endl << separator << endl;
for (index = 0; index < nPars; index++) {
cout << setw(14) << fyAll->GetParName(index) << setw(10) << tog[index] << "\t" << fyAll->GetParameter(index) << " +/- " << fyAll->GetParError(index) << endl;
}
cout << separator << endl;
// if (!strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb01") ||
// !strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb02") ||
// !strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb03") ||
// !strcmp(stBDNCases[iBDNCaseIndex].pcsCaseCode,"134sb0103"))
// {
// b134sbFlag = 1;
// fyAll->SetParameter(gammaT3, stBFitCase.pdSeed[gammaT2]);
// par
// cout << "134-Sb data detected. Forcing gammaT3 = gammaT2. YOU SHOULD GUARANTEE THAT X3 = Y3 = 0. You can set epsX = epsY = 0." << endl << endl;
// }
if (b134sbFlag) cout << "134-Sb data detected. Forcing gammaT3 = gammaT2. YOU SHOULD GUARANTEE THAT X3 = Y3 = 0. You can set epsX = epsY = 0." << endl << endl;
if (bEpsXEqualsEpsYFlag) cout << "You have specified the epsX should be forced to equal epsY. Program has dictated that epsX will not be varied by the fitter." << endl << endl;
else cout << endl;
// Initialize all functions to parameter seed values
fyDC -> SetParameters(par);
fyT1 -> SetParameters(par);
fyT2 -> SetParameters(par);
fyT3 -> SetParameters(par);
fyU1 -> SetParameters(par);
fyU2 -> SetParameters(par);
fyU3 -> SetParameters(par);
frDC -> SetParameters(par);
frT1 -> SetParameters(par);
frT2 -> SetParameters(par);
frT3 -> SetParameters(par);
frU1 -> SetParameters(par);
frU2 -> SetParameters(par);
frU3 -> SetParameters(par);
frAll -> SetParameters(par);
foT1 -> SetParameters(par);
foT2 -> SetParameters(par);
foT3 -> SetParameters(par);
foU1 -> SetParameters(par);
foU2 -> SetParameters(par);
foU3 -> SetParameters(par);
if (stBFitCase.bDoFit) {
// Fix the parameters that are supposed to be fixed
for (index = 0; index < nPars; index++) {
if (tog[index] == 0) fyAll->FixParameter(index, stBFitCase.pdSeed[index]);
}
if (b134sbFlag && tog[gammaT2]==0) fyAll->FixParameter(gammaT3, stBFitCase.pdSeed[gammaT2]);
// Print initial parameters: (see similar code in yAll() in BFit2Model.cxx)
if (nParChanges == 0) {
printf("Ini pars ( 0): ");
for (index = 0; index < nPars; index++) {
if (stBFitCases[iBFitCaseIndex].pbToggle[index]) printf("%s=%.4e ",parNames[index],par[index]);
}
printf("\n");
}
// fyAll->SetParLimits(epsT,0,1);
// fyAll->SetParLimits(epsU,0,1);
// fyAll->SetParLimits(epsV,0,1);
// fyAll->SetParLimits(epsW,0,1);
// fyAll->SetParLimits(epsX,0,1);
// fyAll->SetParLimits(epsY,0,1);
// fyAll->SetParLimits(epsZ,0,1);
// Do fit and get results
timer = clock();
// TVirtualFitter *fitter;
// TVirtualFitter::SetDefaultFitter("Fumili");
// ROOT::Math::MinimizerOptions::SetDefaultMinimizer("GSLMultiMin","BFGS");
//
TFitResultPtr fit = h1->Fit(fyAll,stBFitCase.pcsOptions);
timer = clock() - timer;
printf("\nFitting done in %d clicks (%f seconds).\n", timer, (Float_t)timer/CLOCKS_PER_SEC);
printf("Fit status = %d\n",fit->Status());
printf("Cov status = %d\n",fit->CovMatrixStatus());
printf("Fit valid? = %d\n",fit->IsValid());
TMatrixDSym cov = fit->GetCovarianceMatrix();
// Double_t *cov2 = fit->GetCovarianceMatrix();
// Int_t ii=0, jj=0;
Double_t *covArray = new Double_t [nPars*nPars];
covArray = cov.GetMatrixArray();
// for (Int_t ii=0; ii<8; ii++) {
// // printf("%.3e ",cov.GetMatrixArray()[ii]);
// for (Int_t jj=0; jj<8; jj++) {
// // printf("%.6e ", cov[ii][jj]);
// printf("%.6e ", covArray[ii+jj*nPars] );
// }
// cout << endl;
// }
fit->Print("V");
// Get parameter values from fit
for (index = 0; index < nPars; index++) {
par[index] = fyAll->GetParameter(index);
err[index] = fyAll->GetParError(index);
// printf("%12s err = %f\n", fyAll->GetParName(index), err[index]);
}
// par is now up to date...
// Set other functions to parameter values from fit
BFitNamespace::ComputeParameterDependentVars(par);
fyDC -> SetParameters(par);
fyT1 -> SetParameters(par);
fyT2 -> SetParameters(par);
fyT3 -> SetParameters(par);
fyU1 -> SetParameters(par);
fyU2 -> SetParameters(par);
fyU3 -> SetParameters(par);
frDC -> SetParameters(par);
frT1 -> SetParameters(par);
frT2 -> SetParameters(par);
frT3 -> SetParameters(par);
frU1 -> SetParameters(par);
frU2 -> SetParameters(par);
frU3 -> SetParameters(par);
frAll -> SetParameters(par);
foT1 -> SetParameters(par);
foT2 -> SetParameters(par);
foT3 -> SetParameters(par);
foU1 -> SetParameters(par);
foU2 -> SetParameters(par);
foU3 -> SetParameters(par);
if (0) {
for (Int_t iPar = 0; iPar < nPars; iPar++) {
// grads[iPar] = frT2->GradientPar(iPar,par,0.0001);
printf("%12s val = %f, err = %f\n", fyAll->GetParName(iPar), par[iPar], err[iPar]);
}
TF1 *fInt = new TF1("frT2", rT2, 0.0, tCyc, nPars);
sleep(1.5);
Double_t grads[nPars];
printf("\n");
Double_t timeVar[1] = {0.0};
// fInt->GradientPar(timeVar,grads,0.001);
// fInt->GradientPar(par,grads,0.001);
for (Int_t iPar = 0; iPar < nPars; iPar++) {
// grads[iPar] = frT2->GradientPar(iPar,par,0.0001);
printf("%s grad = %.24f\n", parNames[iPar], grads[iPar]);
}
printf("\n");
Double_t par1[nPars], par2[nPars];
memcpy(par1,par,nPars*sizeof(Double_t));
memcpy(par2,par,nPars*sizeof(Double_t));
par2[r2] = par2[r2]*1.1;
fInt->SetParameters(par1);
Double_t fr_int_1 = fInt->Integral(0.0, tCyc);
fInt->SetParameters(par2);
Double_t fr_int_2 = fInt->Integral(0.0, tCyc);
sleep(0.25);
printf("int1 = %f, int2 = %f\n", fr_int_1, fr_int_2);
}
// Estimate # of betas detected and error
T1_integral = frT1->Integral( 0.0, tCyc);
T2_integral = frT2->Integral( 0.0, tCyc);
T3_integral = frT3->Integral( 0.0, tCyc);
U1_integral = frU1->Integral( 0.0, tCyc);
U2_integral = frU2->Integral( 0.0, tCyc);
U3_integral = frU3->Integral( 0.0, tCyc);
DC_integral = frDC->Integral( 0.0, tCyc);
All_integral = frAll->Integral( 0.0, tCyc);
Integral_sum = DC_integral + T1_integral + T2_integral + T3_integral + U1_integral + U2_integral + U3_integral;
timer = clock() - timer;
printf("\nIntegrals computed in %d clicks (%f seconds).\n", timer, (Float_t)timer/CLOCKS_PER_SEC);
if (stBFitCase.bComputeOtherIntegrals) {
U1_integral_trap_empty = frU1->Integral( 0.0, tBac);
U2_integral_trap_empty = frU2->Integral( 0.0, tBac);
U3_integral_trap_empty = frU3->Integral( 0.0, tBac);
U1_integral_trap_full = frU1->Integral( tBac, tCyc);
U2_integral_trap_full = frU2->Integral( tBac, tCyc);
U3_integral_trap_full = frU3->Integral( tBac, tCyc);
timer = clock() - timer;
printf("Other integrals computed in %d clicks (%f seconds).\n", timer, (Float_t)timer/CLOCKS_PER_SEC);
}
// T1_integral_error = frT1->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// printf("Getting rT2 integral error in 5 seconds...\n"); sleep(1);
// printf("Getting rT2 integral error in 4 seconds...\n"); sleep(1);
// printf("Getting rT2 integral error in 3 seconds...\n"); sleep(1);
// printf("Getting rT2 integral error in 2 seconds...\n"); sleep(1);
// printf("Getting rT2 integral error in 1 seconds...\n"); sleep(1);
// T2_integral_error = frT2->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// T1_integral_error = intErr( frT1, covArray, 0.0, tCyc );
if (stBFitCase.bUseMyErrorFunction) {
T1_integral_error = intErr( frT1, covArray, 0.0, tCyc );
T2_integral_error = intErr( frT2, covArray, 0.0, tCyc );
T3_integral_error = intErr( frT3, covArray, 0.0, tCyc );
U1_integral_error = intErr( frU1, covArray, 0.0, tCyc );
U2_integral_error = intErr( frU2, covArray, 0.0, tCyc );
U3_integral_error = intErr( frU3, covArray, 0.0, tCyc );
DC_integral_error = intErr( frDC, covArray, 0.0, tCyc );
All_integral_error = intErr( frAll, covArray, 0.0, tCyc );
U1_integral_trap_empty_error = intErr( frU1, covArray, 0.0, tBac );
U2_integral_trap_empty_error = intErr( frU2, covArray, 0.0, tBac );
U3_integral_trap_empty_error = intErr( frU3, covArray, 0.0, tBac );
U1_integral_trap_full_error = intErr( frU1, covArray, tBac, tCyc );
U2_integral_trap_full_error = intErr( frU2, covArray, tBac, tCyc );
U3_integral_trap_full_error = intErr( frU3, covArray, tBac, tCyc );
}
else {
T1_integral_error = frT1->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
T2_integral_error = frT2->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
T3_integral_error = frT3->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
U1_integral_error = frU1->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
U2_integral_error = frU2->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
U3_integral_error = frU3->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
All_integral_error = frAll->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
U1_integral_trap_empty_error = frU1->IntegralError( 0.0, tBac, par, cov.GetMatrixArray() );
U2_integral_trap_empty_error = frU2->IntegralError( 0.0, tBac, par, cov.GetMatrixArray() );
U3_integral_trap_empty_error = frU3->IntegralError( 0.0, tBac, par, cov.GetMatrixArray() );
U1_integral_trap_full_error = frU1->IntegralError( tBac, tCyc, par, cov.GetMatrixArray() );
U2_integral_trap_full_error = frU2->IntegralError( tBac, tCyc, par, cov.GetMatrixArray() );
U3_integral_trap_full_error = frU3->IntegralError( tBac, tCyc, par, cov.GetMatrixArray() );
}
// T3_integral_error = frT3->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// U1_integral_error = frU1->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// U2_integral_error = frU2->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// U3_integral_error = frU3->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// DC_integral_error = frDC->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// All_integral_error = frAll->IntegralError( 0.0, tCyc, par, cov.GetMatrixArray() );
// printf("tCyc=%f\n",tCyc);
// T1_integral_error = frT1->IntegralError( 0.0, 1000*tCyc);
// T2_integral_error = frT2->IntegralError( 0.0, tCyc);
// T3_integral_error = frT3->IntegralError( 0.0, tCyc);
// U1_integral_error = frU1->IntegralError( 0.0, tCyc);
// U2_integral_error = frU2->IntegralError( 0.0, tCyc);
// U3_integral_error = frU3->IntegralError( 0.0, tCyc);
// DC_integral_error = frDC->IntegralError( 0.0, tCyc);
// All_integral_error = frAll->IntegralError( 0.0, tCyc);
Integral_sum_error = Sqrt( Power(DC_integral_error,2.0) + Power(T1_integral_error,2.0) + Power(T2_integral_error,2.0) + Power(T3_integral_error,2.0) + Power(U1_integral_error,2.0) + Power(U2_integral_error,2.0) + Power(U3_integral_error,2.0) );
timer = clock() - timer;
printf("Errors computed in %d clicks (%f seconds).\n", timer, (Float_t)timer/CLOCKS_PER_SEC);
cout << endl << separator << endl;
printf("NUMBER OF BETAS DETECTED, by population:\n");
cout << separator << endl;
printf("T1 integral = %.1f +/- %.1f\n", T1_integral, T1_integral_error);
printf("U1 integral = %.1f +/- %.1f\n", U1_integral, U1_integral_error);
printf("T2 integral = %.1f +/- %.1f\n", T2_integral, T2_integral_error);
printf("U2 integral = %.1f +/- %.1f\n", U2_integral, U2_integral_error);
printf("T3 integral = %.1f +/- %.1f\n", T3_integral, T3_integral_error);
printf("U3 integral = %.1f +/- %.1f\n", U3_integral, U3_integral_error);
printf("DC integral = %.1f +/- %.1f\n", DC_integral, DC_integral_error);
cout << separator << endl;
printf("Sum of above = %.1f +/- %.1f <-- no cov in unc\n", Integral_sum, Integral_sum_error);
printf("All integral = %.1f +/- %.1f\n", All_integral, All_integral_error);
if (stBFitCase.bComputeOtherIntegrals) {
cout << separator << endl;
printf("U1 with trap emtpy = %.1f +/- %.1f\n", U1_integral_trap_empty, U1_integral_trap_empty_error );
printf("U2 with trap emtpy = %.1f +/- %.1f\n", U2_integral_trap_empty, U2_integral_trap_empty_error );
printf("U3 with trap emtpy = %.1f +/- %.1f\n", U3_integral_trap_empty, U3_integral_trap_empty_error );
printf("U1 with trap full = %.1f +/- %.1f\n", U1_integral_trap_full, U1_integral_trap_full_error );
printf("U2 with trap full = %.1f +/- %.1f\n", U2_integral_trap_full, U2_integral_trap_full_error );
printf("U3 with trap full = %.1f +/- %.1f\n", U3_integral_trap_full, U3_integral_trap_full_error );
// printf("All untrapped with trap empty = %f (bin %f to bin %f)\n", h1->Integral(binZero, binCap-1) - 0.001*par[DC]*tBac, binZero, binCap);
// printf("All data area in histogram = %f\n", h1->Integral(binZero, binCycle-1));
// printf("All data area in histogram = %f\n", h1->Integral());
}
cout << separator << endl << endl;
} // end if (stBFitCase.bDoFit)
// Draw
Double_t yMin, yMax, yRange;
fyAll->SetLineColor(kBlack);
fyDC->SetLineColor(kBlack);
foT1->SetLineColor(kGreen);
foT2->SetLineColor(kBlue);
foT3->SetLineColor(kRed);
foU1->SetLineColor(kGreen);
foU2->SetLineColor(kBlue);
foU3->SetLineColor(kRed);
h1->SetLineColor(16);
h2->SetLineColor(16);
fyDC->SetLineStyle(2);
foU1->SetLineStyle(2);
foU2->SetLineStyle(2);
foU3->SetLineStyle(2);
// Double_t nPoints = 2 * (1000.0 * stBDNCase.dCycleTime / dRebinFactor); // leading interger is number of points per bin
// Now defined above
fyAll->SetNpx(nPoints);
foT1->SetNpx(nPoints);
foT2->SetNpx(nPoints);
foT3->SetNpx(nPoints);
foU1->SetNpx(nPoints);
foU2->SetNpx(nPoints);
foU3->SetNpx(nPoints);
FuncPrep(fyAll,par,nPoints,kBlack,1);
FuncPrep(foT1,par,nPoints,kGreen,1);
FuncPrep(foT2,par,nPoints,kBlue,1);
FuncPrep(foT3,par,nPoints,kRed,1);
FuncPrep(foU1,par,nPoints,kGreen,7);
FuncPrep(foU2,par,nPoints,kBlue,7);
FuncPrep(foU3,par,nPoints,kRed,7);
// Float_t wdth = 2;
// fyAll->SetLineWidth(wdth);
// foT1->SetLineWidth(wdth);
// foT2->SetLineWidth(1.5*wdth);
// foT3->SetLineWidth(wdth);
// foU1->SetLineWidth(wdth);
// foU2->SetLineWidth(wdth);
// foU3->SetLineWidth(wdth);
Int_t bsmPlot = 0;
Float_t scale = 1.0;
//if (bsmPlot) scale = 2.0;
TCanvas *c_BFit = new TCanvas("c_BFit","Beta singles fit",scale*945,scale*600);
gStyle->SetOptStat("e");
gStyle->SetOptFit(1111);
h1 ->Draw("HIST");
h1->SetXTitle("Cycle time (ms)");
char yTitle[100];
sprintf(yTitle, "Detections / %d ms", Nint(dRebinFactor));
h1->SetYTitle(yTitle);
h1->GetYaxis()->SetTitleOffset(1.4);
fyAll ->Draw("SAME");
foU1->Draw("SAME");
foT1->Draw("SAME");
foU3->Draw("SAME");
foT3->Draw("SAME");
foU2->Draw("SAME");
foT2->Draw("SAME");
fyDC->Draw("SAME");
h2->Draw("HISTSAME");
//c_B_fit->Update();
//Double_t xMin = h1->GetXaxis()->GetXmin();
//Double_t xMax = h1->GetXaxis()->GetXmax();
yMin = par[nCyc]*(0.001*par[DC])*par[dt];
yMax = h1->GetMaximum();
// printf("\nY Range is %f to %f\n\n",yMin,yMax);
yRange = yMax - yMin;
yMin = yMin - 0.05*yRange;
yMax = yMax + 0.30*yRange;
// yMin = 0.0;
// yMax = 14000.0;
//printf("Range = (%f,%f)\n", yMin, yMax);
h1->GetYaxis()->SetRangeUser(yMin,yMax);
// h2->GetYaxis()->SetRangeUser(yMin,yMax);
h1->GetXaxis()->SetRangeUser(-1000,tCyc+1000);
// h2->GetXaxis()->SetRangeUser(-1000,tCyc+1000);
if (bsmPlot) { // special case for a plot in Beta Singles Model appendix in my thesis
h1->SetXTitle("Cycle time (ms)");
h1->SetYTitle("Detections / 500 ms");
h1->SetTitle("Simulation vs Model, All populations");
h1->GetXaxis()->SetRangeUser(0,tCyc);
h1->GetYaxis()->SetTitleOffset(1.0);
TLegend *leg_1 = new TLegend(0.15, 0.62, 0.40, 0.87);
leg_1->AddEntry(h1 , "Data");
leg_1->AddEntry(fyDC, "DC");
char pcsT1Name[STRING_SIZE], pcsT2Name[STRING_SIZE], pcsT3Name[STRING_SIZE];
char pcsU1Name[STRING_SIZE], pcsU2Name[STRING_SIZE], pcsU3Name[STRING_SIZE];
sprintf(pcsT1Name,"Species 1, trapped");
sprintf(pcsT2Name,"Species 2, trapped");
sprintf(pcsT3Name,"Species 3, trapped");
sprintf(pcsU1Name,"Species 1, untrapped");
sprintf(pcsU2Name,"Species 2, untrapped");
sprintf(pcsU3Name,"Species 3, untrapped");
leg_1->AddEntry(foT1, pcsT1Name);
leg_1->AddEntry(foU1, pcsU1Name);
leg_1->AddEntry(foT2, pcsT2Name);
leg_1->AddEntry(foU2, pcsU2Name);
leg_1->AddEntry(foT3, pcsT3Name);
leg_1->AddEntry(foU3, pcsU3Name);
leg_1->AddEntry(fyAll , "Fit function (all species)");
leg_1->SetFillColor(0);
leg_1->Draw();
}
else { // normal case
TLegend *leg_1 = new TLegend(0.13, 0.69, 0.35, 0.94);
leg_1->AddEntry(h1 , "Data");
leg_1->AddEntry(fyDC, "DC");
char pcsT1Name[STRING_SIZE], pcsT2Name[STRING_SIZE], pcsT3Name[STRING_SIZE];
char pcsU1Name[STRING_SIZE], pcsU2Name[STRING_SIZE], pcsU3Name[STRING_SIZE];
strcpy(pcsT1Name, stBDNCase.pcsSpecies1Name); strcat(pcsT1Name, " trapped");
strcpy(pcsT2Name, stBDNCase.pcsSpecies2Name); strcat(pcsT2Name, " trapped");
strcpy(pcsT3Name, stBDNCase.pcsSpecies3Name); strcat(pcsT3Name, " trapped");
strcpy(pcsU1Name, stBDNCase.pcsSpecies1Name); strcat(pcsU1Name, " untrapped");
strcpy(pcsU2Name, stBDNCase.pcsSpecies2Name); strcat(pcsU2Name, " untrapped");
strcpy(pcsU3Name, stBDNCase.pcsSpecies3Name); strcat(pcsU3Name, " untrapped");
leg_1->AddEntry(foT1, pcsT1Name);
leg_1->AddEntry(foU1, pcsU1Name);
leg_1->AddEntry(foT2, pcsT2Name);
leg_1->AddEntry(foU2, pcsU2Name);
leg_1->AddEntry(foT3, pcsT3Name);
leg_1->AddEntry(foU3, pcsU3Name);
leg_1->AddEntry(fyAll , "Fit function (all species)");
leg_1->SetFillColor(0);
leg_1->Draw();
}
TPaveText *pt = new TPaveText(.70, .85, .91, .94, "NDC");
pt->AddText(stBFitCase.pcsCaseCode);
pt->SetTextFont(82);
pt->Draw();
if (stBFitCase.bDoFit) {
char int_DC[100];
char int_T1[100], int_T2[100], int_T3[100];
char int_U1[100], int_U2[100], int_U3[100];
char int_All[100];
// sprintf(int1,"T1 = %8.0f +/- %6.0f; U1 = %8.0f +/- %6.0f", T1_integral, T1_integral_error, U1_integral, U1_integral_error);
// sprintf(int2,"T2 = %8.0f +/- %6.0f; U2 = %8.0f +/- %6.0f", T2_integral, T2_integral_error, U2_integral, U2_integral_error);
// sprintf(int3,"T3 = %8.0f +/- %6.0f; U3 = %8.0f +/- %6.0f", T3_integral, T3_integral_error, U3_integral, U3_integral_error);
sprintf(int_DC, "A=%9.0f #pm%9.0f", DC_integral, DC_integral_error);
sprintf(int_T1, "A=%9.0f #pm%9.0f", T1_integral, T1_integral_error);
sprintf(int_U1, "A=%9.0f #pm%9.0f", U1_integral, U1_integral_error);
sprintf(int_T2, "A=%9.0f #pm%9.0f", T2_integral, T2_integral_error);
sprintf(int_U2, "A=%9.0f #pm%9.0f", U2_integral, U2_integral_error);
sprintf(int_T3, "A=%9.0f #pm%9.0f", T3_integral, T3_integral_error);
sprintf(int_U3, "A=%9.0f #pm%9.0f", U3_integral, U3_integral_error);
sprintf(int_All, "A=%9.0f #pm%9.0f", All_integral, All_integral_error);
TLegend *calc = new TLegend(.13, 0.50, 0.35, 0.69);
calc->AddEntry(fyDC, int_DC);
calc->AddEntry(foT1, int_T1);
calc->AddEntry(foU1, int_U1);
calc->AddEntry(foT2, int_T2);
calc->AddEntry(foU2, int_U2);
calc->AddEntry(foT3, int_T3);
calc->AddEntry(foU3, int_U3);
calc->AddEntry(fyAll, int_All);
calc->SetTextFont(82);
calc->SetTextSize(0.02);
calc->SetFillColor(0);
calc->Draw();
} // end if (stBFitCase.bDoFit)
gPad->Update();
TPaveStats *stats_1 = (TPaveStats*)h1->FindObject("stats");
stats_1->SetTextFont(82);
//stats_1->SetTextSize(0.02);
stats_1->SetX1NDC(.35);
stats_1->SetX2NDC(.60);
stats_1->SetY1NDC(.69);
stats_1->SetY2NDC(.94);
gPad->Update();
c_BFit->Modified();
outfile->WriteTObject(c_BFit);
outfile->WriteTObject(h1);
if (stBFitCase.bMonteCarlo) {
TH1D *h_DDC = (TH1D*)f->Get("h_DDC_cyctime");
TH1D *h_DT1 = (TH1D*)f->Get("h_DT1_cyctime");
TH1D *h_DT2 = (TH1D*)f->Get("h_DT2_cyctime");
TH1D *h_DT3 = (TH1D*)f->Get("h_DT3_cyctime");
TH1D *h_DU1 = (TH1D*)f->Get("h_DU1_cyctime");
TH1D *h_DU2 = (TH1D*)f->Get("h_DU2_cyctime");
TH1D *h_DU3 = (TH1D*)f->Get("h_DU3_cyctime");
h2->SetLineColor(kBlack);
if (stBFitCase.bHasDDC) h_DDC->SetLineColor(kBlack);
// h_DT1->SetLineColor(kGreen);
// h_DU1->SetLineColor(kGreen);
// h_DT2->SetLineColor(kBlue);
// h_DU2->SetLineColor(kBlue);
// h_DT3->SetLineColor(kRed);
// h_DU3->SetLineColor(kRed);
if (stBFitCase.bHasDDC) h_DDC->SetLineStyle(7);
// h_DU1->SetLineStyle(7);
// h_DU2->SetLineStyle(7);
// h_DU3->SetLineStyle(7);
if (stBFitCase.bHasDDC) h_DDC->Rebin(dRebinFactor);
// h_DT1->Rebin(dRebinFactor);
// h_DT2->Rebin(dRebinFactor);
// h_DT3->Rebin(dRebinFactor);
// h_DU1->Rebin(dRebinFactor);
// h_DU2->Rebin(dRebinFactor);
// h_DU3->Rebin(dRebinFactor);
//
// fyT1->SetLineColor(kGreen);
// fyT2->SetLineColor(kBlue);
// fyT3->SetLineColor(kRed);
fyU1->SetLineColor(kGreen);
fyU2->SetLineColor(kBlue);
fyU3->SetLineColor(kRed);
// fyU1->SetLineStyle(7);
// fyU2->SetLineStyle(7);
// fyU3->SetLineStyle(7);
// fyT1->SetNpx(nPoints);
// fyT2->SetNpx(nPoints);
// fyT3->SetNpx(nPoints);
fyU1->SetNpx(nPoints);
fyU2->SetNpx(nPoints);
fyU3->SetNpx(nPoints);
h2->GetYaxis()->SetRangeUser(0,yMax);
h2->GetXaxis()->SetRangeUser(-1000,tCyc+1000);
// TCanvas *c_decays_cyctime = new TCanvas("c_decays_cyctime","Decays versus cycle time",945,600);
// h2->Draw();
// fyAll->Draw("SAME");
// if (stBFitCase.bHasDDC) fyDC->Draw("SAME");
// fyT1->Draw("SAME");
// fyT2->Draw("SAME");
// fyT3->Draw("SAME");
// fyU1->Draw("SAME");
// fyU2->Draw("SAME");
// fyU3->Draw("SAME");
// if (stBFitCase.bHasDDC) h_DDC->Draw("SAME");
// h_DT1->Draw("SAME");
// h_DT2->Draw("SAME");
// h_DT3->Draw("SAME");
// h_DU1->Draw("SAME");
// h_DU2->Draw("SAME");
// h_DU3->Draw("SAME");
// gPad->Update();
// TPaveStats *stats_2 = (TPaveStats*)h2->FindObject("stats");
// stats_2->SetX1NDC(.13);
// stats_2->SetX2NDC(.32);
// stats_2->SetY1NDC(.80);
// stats_2->SetY2NDC(.88);
// gPad->Update();
// c_decays_cyctime->Modified();
// outfile->WriteTObject(c_decays_cyctime);
printf("T1 entries: %10d\n",(Int_t)h_DT1->GetEntries());
printf("U1 entries: %10d\n",(Int_t)h_DU1->GetEntries());
printf("T2 entries: %10d\n",(Int_t)h_DT2->GetEntries());
printf("U2 entries: %10d\n",(Int_t)h_DU2->GetEntries());
printf("T3 entries: %10d\n",(Int_t)h_DT3->GetEntries());
printf("U3 entries: %10d\n",(Int_t)h_DU3->GetEntries());
if (stBFitCase.bHasDDC) printf("DC entries: %10d\n",(Int_t)h_DDC->GetEntries());
printf("Total entries: %10d\n",(Int_t)h1->GetEntries());
if (stBFitCase.bHasVWXY) { // used for Monte Carlo data where V, W, X, Y pops are known
TH1D *h_DV1 = (TH1D*)f->Get("h_DV1_cyctime");
TH1D *h_DV2 = (TH1D*)f->Get("h_DV2_cyctime");
TH1D *h_DV3 = (TH1D*)f->Get("h_DV3_cyctime");
TH1D *h_DW1 = (TH1D*)f->Get("h_DW1_cyctime");
TH1D *h_DW2 = (TH1D*)f->Get("h_DW2_cyctime");
TH1D *h_DW3 = (TH1D*)f->Get("h_DW3_cyctime");
TH1D *h_DZ1 = (TH1D*)f->Get("h_DZ1_cyctime");
TH1D *h_DZ2 = (TH1D*)f->Get("h_DZ2_cyctime");
TH1D *h_DZ3 = (TH1D*)f->Get("h_DZ3_cyctime");
TH1D *h_DX2 = (TH1D*)f->Get("h_DX2_cyctime");
TH1D *h_DX3 = (TH1D*)f->Get("h_DX3_cyctime");
TH1D *h_DY2 = (TH1D*)f->Get("h_DY2_cyctime");
TH1D *h_DY3 = (TH1D*)f->Get("h_DY3_cyctime");
HistPrep(h_DT1,dRebinFactor,dBinWidth,"T");
HistPrep(h_DT2,dRebinFactor,dBinWidth,"T");
HistPrep(h_DT3,dRebinFactor,dBinWidth,"T");
HistPrep(h_DV1,dRebinFactor,dBinWidth,"V");
HistPrep(h_DV2,dRebinFactor,dBinWidth,"V");
HistPrep(h_DV3,dRebinFactor,dBinWidth,"V");
HistPrep(h_DW1,dRebinFactor,dBinWidth,"W");
HistPrep(h_DW2,dRebinFactor,dBinWidth,"W");
HistPrep(h_DW3,dRebinFactor,dBinWidth,"W");
HistPrep(h_DZ1,dRebinFactor,dBinWidth,"Z");
HistPrep(h_DZ2,dRebinFactor,dBinWidth,"Z");
HistPrep(h_DZ3,dRebinFactor,dBinWidth,"Z");
HistPrep(h_DX2,dRebinFactor,dBinWidth,"X");
HistPrep(h_DX3,dRebinFactor,dBinWidth,"X");
HistPrep(h_DY2,dRebinFactor,dBinWidth,"Y");
HistPrep(h_DY3,dRebinFactor,dBinWidth,"Y");
/* h_DV1 ->Rebin(dRebinFactor);
h_DV2 ->Rebin(dRebinFactor);
h_DV3 ->Rebin(dRebinFactor);
h_DW1 ->Rebin(dRebinFactor);
h_DW2 ->Rebin(dRebinFactor);
h_DW3 ->Rebin(dRebinFactor);
h_DZ1 ->Rebin(dRebinFactor);
h_DZ2 ->Rebin(dRebinFactor);
h_DZ3 ->Rebin(dRebinFactor);
h_DX2 ->Rebin(dRebinFactor);
h_DX3 ->Rebin(dRebinFactor);
h_DY2 ->Rebin(dRebinFactor);
h_DY3 ->Rebin(dRebinFactor);
h_DV1->SetLineColor(kBlack);
h_DV2->SetLineColor(kBlack);
h_DV3->SetLineColor(kBlack);
h_DX2->SetLineColor(kBlack);
h_DY2->SetLineColor(kBlack);
h_DX3->SetLineColor(kBlack);
h_DY3->SetLineColor(kBlack);
*/
// h_DX2->SetLineStyle(8);
// h_DY2->SetLineStyle(3);
// h_DX3->SetLineStyle(8);
// h_DY3->SetLineStyle(3);
TH1D *h_DU2_1 = (TH1D*)h_DU2->Rebin(1,"h_DU2_1");
TH1D *h_DU3_1 = (TH1D*)h_DU3->Rebin(1,"h_DU3_1");
h_DU2_1->SetLineStyle(1);
h_DU3_1->SetLineStyle(1);
h_DU2_1->SetLineColor(kBlack);
h_DU3_1->SetLineColor(kBlack);