From f034f552e2dad7f09a87d7353bc280b17c0157c1 Mon Sep 17 00:00:00 2001
From: Brian Raymor <brianraymor@chanzuckerberg.com>
Date: Thu, 6 Jun 2024 13:44:37 -0700
Subject: [PATCH] Added modality to seurat encoding (#955)

---
 schema/5.2.0/schema.md          | 2 +-
 schema/5.2.0/seurat_encoding.md | 4 ++++
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/schema/5.2.0/schema.md b/schema/5.2.0/schema.md
index c3511d77..1b515be4 100644
--- a/schema/5.2.0/schema.md
+++ b/schema/5.2.0/schema.md
@@ -616,7 +616,7 @@ Curators MUST annotate the following columns in the `obs` dataframe:
           <tbody>
             <tr>
               <td><i>10x multiome</i> [<a href="https://www.ebi.ac.uk/ols4/ontologies/efo/classes?obo_id=EFO%3A0030059"><code>EFO:0030059</code></a>]</td>
-              <td><code>"epigenomics"</code> or <code>"transcriptomics"</code></td>
+              <td><code>"epigenomics"</code> or<br> <code>"transcriptomics"</code></td>
            </tr>
             <tr>
               <td><i>10x scATAC-seq</i> [<a href="https://www.ebi.ac.uk/ols4/ontologies/efo/classes?obo_id=EFO%3A0030007"><code>EFO:0030007</code></a>]</td>
diff --git a/schema/5.2.0/seurat_encoding.md b/schema/5.2.0/seurat_encoding.md
index beb7479a..f6d61f6a 100644
--- a/schema/5.2.0/seurat_encoding.md
+++ b/schema/5.2.0/seurat_encoding.md
@@ -138,6 +138,10 @@ This `data.frame` will have the following columns required by the schema. There
       <td>is_primary_data</td>
       <td><code>logical</code></td>
     </tr>
+    <tr>
+      <td>modality</td>
+      <td><code>character</code></td>
+    </tr>
     <tr>
       <td>observation_joinid</td>
       <td><code>character</code></td>