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I run the RCTD with doublet mode. The cell type mode include singlet, doublet certain, doublet uncertain, and reject. Some spots showed NA, I wonder what this means and how they have been defined. what is the difference between NA and reject? Shall we still include them in the downstream analysis?
Thank you in advance for your help!
The text was updated successfully, but these errors were encountered:
Hi RCTD team!
I run the RCTD with doublet mode. The cell type mode include singlet, doublet certain, doublet uncertain, and reject. Some spots showed NA, I wonder what this means and how they have been defined. what is the difference between NA and reject? Shall we still include them in the downstream analysis?
Thank you in advance for your help!
The text was updated successfully, but these errors were encountered: