Releases: icgc-argo-workflows/nextflow-data-processing-utility-tools
Releases · icgc-argo-workflows/nextflow-data-processing-utility-tools
Release 1.1.5
- adds
set -euxo pipefail
toprocess/cleanup-workdir.nf
Release 1.1.4
- bump song-client version default to
4.2.1
- using new built-in
jq
forsong-submit
to extractanalysisId
instead ofsed
and addedset -euxo pipefail
to mitigate error swallowing
Release 1.1.3
- bump
score-client
default container version to `5.0.0
Release 1.1.2
- Updated SONG to version: 4.2.0
Release 1.1.1
- removed
extract_analysis_id.nf
in favour of integratedgrep | sed | tr
commands insong_submit.nf
song_manifest.nf
usesout
directory now, no impact on process emit- removed
mkdir out
fromscore_download.nf
Release 1.1.0
- Updated SONG to version: 4.1.1
- Updated SCORE to version: 3.1.1
- No longer using
curl
insong_get_analysis.nf
, instead usingsing search -a
- Updated
song_score_download.nf
to use emittedfiles
fromscoreDownload
process
Release 1.0.0
Upgrade to NF20.x + Use secure env (#12) * update readme * use new take syntax * updated env usage (untested)