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enhance analysis of timelapse images #72

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dlegland opened this issue Oct 10, 2022 · 2 comments
Open
2 tasks

enhance analysis of timelapse images #72

dlegland opened this issue Oct 10, 2022 · 2 comments
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@dlegland
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When performing analysis of time-lapse images, it would be nice to have results per label and per frame. Conversion to stack consider 3D labels, that is not the expected result.

  • Analyze Regions
  • Intensity Measurements 2D/3D

Ref: image.sc#72522

@bvandenbroek
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Hi @dlegland,

I've run into the same issue a couple of times. I'm commenting here just to revive the issue. :-)
MorphoLibJ doesn't even interpret it as 3D, but crashes, because the 2D labelmap and "3D" timelapse are incompatible.

By the way, converting the labels to 2D ROIs and using ImageJ's 'roiManager("Multi Measure") macro function does the job as well, and in my hands ~5 times faster than duplicating and measuring each frame separately (in IJ1 Macro).

Best regards!
Bram

@dlegland
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Hi,
yes, good idea to revive it! It is not forgotten, I even have a working branch on it, but had very few time to work on it. But having feedback on user needs helps to identify priorities.
Hope to have some news soon...

@dlegland dlegland self-assigned this Jun 20, 2024
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