From 170266d57f75103d05c297d639946f460a3894d2 Mon Sep 17 00:00:00 2001 From: rafapereirabr Date: Mon, 21 Oct 2024 06:53:17 -0300 Subject: [PATCH] GA with ubuntu 22.04 --- .github/workflows/R-CMD-check-CRAN.yaml | 67 +++++++++++-------------- .github/workflows/R-CMD-check.yaml | 8 +-- 2 files changed, 32 insertions(+), 43 deletions(-) diff --git a/.github/workflows/R-CMD-check-CRAN.yaml b/.github/workflows/R-CMD-check-CRAN.yaml index f8b39f8a..a7e96ccb 100644 --- a/.github/workflows/R-CMD-check-CRAN.yaml +++ b/.github/workflows/R-CMD-check-CRAN.yaml @@ -1,19 +1,25 @@ +# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. +# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions on: push: paths: - r-package/** branches: + - main - master + - dev pull_request: paths: - r-package/** branches: + - main - master + - dev -name: check_as_cran +name: R-CMD-check-as-CRAN jobs: - check_as_cran: + R-CMD-check: runs-on: ${{ matrix.config.os }} name: ${{ matrix.config.os }} (${{ matrix.config.r }}) @@ -22,9 +28,10 @@ jobs: fail-fast: false matrix: config: - - {os: ubuntu-22.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"} + - {os: ubuntu-22.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} env: + R_REMOTES_NO_ERRORS_FROM_WARNINGS: true RSPM: ${{ matrix.config.rspm }} GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} @@ -32,70 +39,52 @@ jobs: - uses: actions/checkout@v2 - uses: r-lib/actions/setup-r@v2 - id: install-r with: r-version: ${{ matrix.config.r }} - http-user-agent: ${{ matrix.config.http-user-agent }} - uses: r-lib/actions/setup-pandoc@v2 - - name: Install pak and query dependencies + - name: Query dependencies run: | - install.packages("pak", repos = "https://r-lib.github.io/p/pak/dev/") - saveRDS(pak::pkg_deps("local::.", dependencies = TRUE), ".github/r-depends.rds") + install.packages('remotes') + saveRDS(remotes::dev_package_deps(dependencies = TRUE), "../.github/depends.Rds", version = 2) + writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), "../.github/R-version") shell: Rscript {0} working-directory: r-package - - name: Restore R package cache + - name: Cache R packages uses: actions/cache@v2 with: - path: | - ${{ env.R_LIBS_USER }}/* - !${{ env.R_LIBS_USER }}/pak - key: ${{ matrix.config.os }}-${{ steps.install-r.outputs.installed-r-version }}-1-${{ hashFiles('.github/r-depends.rds') }} - restore-keys: ${{ matrix.config.os }}-${{ steps.install-r.outputs.installed-r-version }}-1- + path: ${{ env.R_LIBS_USER }} + key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} + restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- - - name: Install system dependencies (Linux) - if: runner.os == 'Linux' + - name: Install system dependencies run: | - pak::local_system_requirements(execute = TRUE) - pak::pkg_system_requirements("rcmdcheck", execute = TRUE) - shell: Rscript {0} + while read -r cmd + do + eval sudo $cmd + done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "22.04"))') working-directory: r-package - name: Install dependencies run: | - pak::local_install_dev_deps(upgrade = TRUE) - pak::pkg_install("rcmdcheck") - shell: Rscript {0} - working-directory: r-package - - - name: Session info - run: | - options(width = 100) - pkgs <- installed.packages()[, "Package"] - sessioninfo::session_info(pkgs, include_base = TRUE) + remotes::install_deps(dependencies = TRUE) + remotes::install_cran("rcmdcheck") shell: Rscript {0} working-directory: r-package - name: Check env: - _R_CHECK_CRAN_INCOMING_: false + _R_CHECK_CRAN_INCOMING_REMOTE_: false NOT_CRAN: false - run: | - options(crayon.enabled = TRUE) - rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") + run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") shell: Rscript {0} working-directory: r-package - - name: Show testthat output - if: always() - run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true - shell: bash - - name: Upload check results if: failure() uses: actions/upload-artifact@main with: - name: ${{ matrix.config.os }}-r${{ matrix.config.r }}-results + name: ${{ runner.os }}-r${{ matrix.config.r }}-results path: check diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml index 7753d697..d2111ac7 100644 --- a/.github/workflows/R-CMD-check.yaml +++ b/.github/workflows/R-CMD-check.yaml @@ -33,9 +33,9 @@ jobs: - {os: windows-latest, r: 'oldrel'} - {os: macOS-latest, r: 'release'} - {os: macOS-latest, r: 'oldrel'} - - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} - - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} - - {os: ubuntu-20.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-22.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-22.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-22.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} env: R_REMOTES_NO_ERRORS_FROM_WARNINGS: true @@ -79,7 +79,7 @@ jobs: while read -r cmd do eval sudo $cmd - done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') + done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "22.04"))') working-directory: r-package - name: Install system dependencies (MacOS)