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Error in scRNA+scATAC analysis #2

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adamtongji opened this issue May 23, 2022 · 2 comments
Open

Error in scRNA+scATAC analysis #2

adamtongji opened this issue May 23, 2022 · 2 comments

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@adamtongji
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Hi,

Thank you for your great tools for single cell multi-omics analysis. I successfully ran the cite-seq demo but failed to ran our scRNA+scATAC data with following error report:

截屏2022-05-23 下午3 08 45

The input files of our scRNA+scATAC data are formatted same as cite-seq demo data. Could you help us solve the error above?

Thanks!
Shaliu

@gabumon0
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Hi,

Thank you for your great tools for single cell multi-omics analysis. I successfully ran the cite-seq demo but failed to ran our scRNA+scATAC data with following error report:

截屏2022-05-23 下午3 08 45

The input files of our scRNA+scATAC data are formatted same as cite-seq demo data. Could you help us solve the error above?

Thanks! Shaliu

I also encounter the similar problem, I have two rna+atac datasets and one success, one failed; the erroe information as follows:
1677121303222

@chyli721-ccnu
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What an interesting work! I have run into the same problem, I can reproduce the data provided in the tutorial, but when using my own data, I tried two different sets of CITE-seq data and both reported errors. Could you help us solve the error above?
Thanks!
9e9439c11be44d2c57f2858e4643eae2

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3 participants