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Objective Reduce the file size of the .eps UpSet figure produced in R.
Code
upset( M1_BinaryMatrix, colnames(M1_BinaryMatrix), sort_intersections_by='ratio', intersections='all', min_degree=2, set_sizes=( upset_set_size(position='right') + geom_text(aes(label=paste0(round((..count../nrow(M1_BinaryMatrix))*100), '%')), hjust=1.1, stat='count', color='white') + expand_limits(y=1000) + ylab("") + theme(axis.text.x = element_blank()) ), # base_annotations=list( 'Intersection ratio'=intersection_ratio(text_mapping=aes(label=!!upset_text_percentage())) # 'Intersection ratio'= intersection_ratio(text_mapping=aes(label=paste0(round( # !!get_size_mode('inclusive_intersection')/!!nrow(head(M1_BinaryMatrix, 1000)) * 100 # ), '%'))) + ylab("") + theme(axis.text.y=element_blank()) ), # name="", wrap=TRUE, stripes=c(alpha('grey90', 0.45), alpha('white', 0.3)), matrix = intersection_matrix( geom=geom_point( shape='square', size=4 ), segment=geom_segment( linetype='solid' ), outline_color=list( active='darkorange3', inactive='grey70' ) ) ) + labs(title = "", caption = "")
ggsave( "ups.eps", plot = last_plot(), device = 'eps', # scale = 1 # width = NA, # height = NA, # units = c("in", "cm", "mm", "px"), dpi = 300, limitsize = TRUE # bg="transparent" )
Context (required) ComplexUpset version: 1.3.3
R version 4.2.2 (2022-10-31 ucrt)
R version 4.2.2 (2022-10-31 ucrt) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 19044)
The text was updated successfully, but these errors were encountered:
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Objective
Reduce the file size of the .eps UpSet figure produced in R.
Code
Context (required)
ComplexUpset version: 1.3.3
The text was updated successfully, but these errors were encountered: