python-ci.yaml

name: Python CI

on:
  push:
    branches: [ main ]
  pull_request:
    branches: [ main ]

jobs:
  test:
    runs-on: ubuntu-latest

    strategy:
      matrix:
        python-version: ["3.10", "3.11"]

    steps:
      - uses: actions/checkout@v3

      - name: Install Micromamba
        run: |
          sudo apt-get update
          sudo apt-get install -y curl
          curl -L https://micromamba.snakepit.net/api/micromamba/linux-64/latest | tar -xvj -C /usr/local/bin --strip-components=1 bin/micromamba

      - name: Create environment
        run: |
          micromamba create --name test-env -f environment.yaml -y -c conda-forge
        env:
          MAMBA_ROOT_PREFIX: /usr/local/micromamba

      - name: Set up Micromamba environment
        run: echo "MICROMAMBA_ROOT_PREFIX=/usr/local/micromamba" >> $GITHUB_ENV
        shell: bash

      - name: Install dependencies
        run: micromamba run -n test-env micromamba install -y -f environment.yaml -c conda-forge

      - name: Run tests
        run: micromamba run -n test-env pytest