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lista_errores
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ERROR in netcdf
configure: error: Can't find or link to the hdf5 library. Use --disable-netcdf-4, or see config.log for errors.
FIX:
./configure --prefix=/home/mvargas/WRF/library/netcdf FC=gfortran F77=gfortran CC=gcc --enable-shared LDFLAGS="-L$HOME/WRF/library/hdf5/hdf5-1.8.13/lib" CPPFLAGS="-I$HOME/WRF/library/hdf5/hdf5-1.8.13/include"
ERROR in make check ncdf-fortran
../fortran/.libs/libnetcdff.so: undefined reference to `nc_put_vara_short'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_get_vara_short'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_get_att_float'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_get_vara_schar'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_inq_attname'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_set_default_format'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_inq_dimname'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_get_vara_double'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_put_vara_text'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_put_var_schar'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_inq_dim'
../fortran/.libs/libnetcdff.so: undefined reference to `nc_put_vars_schar'
FIX:
Corregir path
echo export NETCDF=$(pwd) >> ~/.bashrc
echo export NETCDF_LIB=$(pwd)/../lib >> ~/.bashrc
echo export NETCDF_INC=(pwd)/../include >> ~/.bashrc
ERROR in make check ncdf-fortran
../fortran/.libs/libnetcdff.so: undefined reference to `nc_open_mem'
collect2: error: ld returned 1 exit status
Makefile:1240: recipe for target 'nf_test' failed
make[2]: *** [nf_test] Error 1
FIX : usar netcdf-fortran-4.2
Error de compilacion WRF:
config seleccionada: 35-1
USando mpich
la declaración previa de ‘MPI_Fint’ estaba aquí
error: redefinición de la definición de tipo ‘MPI_Fint’
Fix: el error es que olvide cargar librerias
load module compiler/gcc4.8.4
librerias cargadas: mpi/openmpi/1.8.4-gcc_4.8.4
error: expected declaration specifiers or ‘...’ before ‘MPI_Comm’
1147 int tag, MPI_Comm comm);
FIX:
./clean -a
./configure
editar confire.wrf agregando -DMPI2_SUPPORT en la linea DM_CC.
compilar de nuevo
ERROR en configure usando mvapich
testing for MPI_Comm_f2c and MPI_Comm_c2f
MPI_Comm_f2c and MPI_Comm_c2f are not supported
FIX : el problema es que WRF estaba tomando openmpi desde /src/lib y para openmpi hay que cargar el flag -DMPI2_SUPPORT
fix parcial: usar openmi.TODO averiguar como haer para usar mvapich
ALLOCATE( clat_glob(ids:ide,jds:jde), STAT=alloc_status, ERRMSG=alloc_err_
1
Error: Error sintáctico en la declaración ALLOCATE en (1)
FIX: Hay que pisar el archivo start_em.F ubicado en dym_em
por el archivo http://www2.mmm.ucar.edu/wrf/src/fix/start_em.F.fix.3011
Error:
/home/alighezzolo/conae/gcc/library/netCDF/lib/libnetcdf.so: undefined reference to `H5T_STD_U16LE_g'
FIX:
Error: wrf_io.o:wrf_io.f:(.text+0xaa58): more undefined references to `GOMP_parallel' follow
collect2: error: ld returned 1 exit status
FIX:
------------------------------------------------------------------r
Error de compilacion en WPS:
undefined reference to `GOMP_parallel_start'
FIX:
./clean -a
./configure
editar confire.wps agregando -lgomp ala variable WRF_LIB
compilar de nuevo
-------------------------------------------------------------------
Error de compilacion en WPS:
error: unrecognized command line option mpif90 -f90=gfortran
FIX: Borrar -f90=gfortran en configure.wps
gcc: error: unrecognized command line option ‘-cc=gcc’
FIX: Borrar -cc=gcc en configure.wps
-------------------------------------------------------------------
Error de ejecucion en metgrid.exe, real.exe, wrf.exe cuando compilamos wrf y wps con
/mvapich2/2.1-gcc_4.9.2:
wrf.exe: /opt/gcc/4.8.4/lib64/libgomp.so.1: version `GOMP_4.0' not found (required by wrf.exe)
FIX: ver readme
compilar openmi con flag --mpi2=pmi en comadno srun
TODO revisar si esta bien esta info
Error de ejecucion geogrid
error while loading shared libraries: libnetcdff.so.6: cannot open shared object file: No such file or directory
FIX: CHECKEAR que la variable $LD_LIBRARY_PATH tenga bien los valores de las librerias de netcdf
-------------------------------------------------------------------
Error en compilacion de libreria de CUDA:
gfortran: error: /opt/cuda/6.5/lib64/libcublasemu.so: No existe el fichero o el directorio
FIX: comentar en makefile el uso de cuda emu