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setup.py
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from setuptools import setup, find_packages
setup(
name="scSemiProfiler",
version="1.0.0",
description='scSemiProfiler package 1.0',
author='Jingtao Wang',
author_email = '[email protected]',
url='https://github.com/mcgilldinglab/scSemiProfiler',
entry_points={'console_scripts':['activeselect=scSemiProfiler.representative_selection:main','scprocess=scSemiProfiler.singlecell_process:main','initsetup=scSemiProfiler.initial_setup:main','scinfer=scSemiProfiler.inference:main','get_eg_representatives=scSemiProfiler.get_eg_representatives:main']},
#packages=['scSemiProfiler'],
packages=find_packages(),
classifiers=[
'Programming Language :: Python :: 3.9'],
install_requires=['numpy== 1.26.2',
'scanpy== 1.9.6',
'scipy== 1.11.4',
'anndata== 0.10.3',
'faiss-cpu== 1.7.4',
'torch>= 1.12.1',
'scikit-learn== 1.3.2',
'pandas== 2.1.3',
'jax== 0.4.19',
'jaxlib== 0.4.19',
'igraph==0.9.9',
'gseapy==1.0.4'
'mpmath'==1.3.0,
'scvi-tools == 1.0.4'],
)