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INSTALL.md

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How to install sequenceParser

External dependencies

  • Boost
    Version 1.48.0 or upper
    Components regex, system, filesystem, locale

  • Swig
    Version 1.3.36 or upper
    (for Python/Java Binding)

To build

SequenceParser uses CMake build system.

cmake .
make
make install

To use specific library

Boost
cmake . -DBOOST_ROOT=/path/to/your/boost/install

Tested compilers

Linux
  • GCC 4.4.1 on OpenSUSE 11.2 64bits
  • GCC 4.6.2 on Fedora 20 64bits
MacOS
Windows

Launch tests

Python tests

Using nosetests:

nosetests test/pyTest