From 1504f9c58149de2bcfb5815d9b920c8963432a88 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Sun, 4 Feb 2024 09:00:57 +0100 Subject: [PATCH] Update conf/test_full.config --- conf/test_full.config | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/conf/test_full.config b/conf/test_full.config index 09328a70..d7f3365e 100644 --- a/conf/test_full.config +++ b/conf/test_full.config @@ -23,7 +23,7 @@ params { kraken2_db = "s3://ngi-igenomes/test-data/mag/minikraken_8GB_202003.tgz" cat_db = "s3://ngi-igenomes/test-data/mag/CAT_prepare_20210107.tar.gz" // gtdb_db = "s3://ngi-igenomes/test-data/mag/gtdbtk_r214_data.tar.gz" - skip_gtdbtk = false + skip_gtdbtk = true // TODO TEMPORARY: deactivate SPAdes due to incompatibility of container with fusion file system skip_spades = true