Fix linting from a comment

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Fix linting from a comment

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allow integer sample names Fix linting from a comment #1289: Issue comment #1421 (comment) created by pinin4fjords

January 16, 2025 15:51

Error for single reads during FASTQ linting preprocessing Fix linting from a comment #1288: Issue comment #1483 (comment) created by cchapus

January 16, 2025 15:29

RSeQC module tin.py creates RefseqID instead of ENSEMBLIDs of transcripts Fix linting from a comment #1287: Issue comment #1442 (comment) created by AnissaE

January 16, 2025 14:53

RSeQC module tin.py creates RefseqID instead of ENSEMBLIDs of transcripts Fix linting from a comment #1286: Issue comment #1442 (comment) created by pinin4fjords

January 16, 2025 14:32

strandness error Fix linting from a comment #1285: Issue comment #1420 (comment) created by pinin4fjords

January 16, 2025 14:24

Pipeline prefixes X to samplenames Fix linting from a comment #1284: Issue comment #1446 (comment) created by pinin4fjords

January 16, 2025 14:22

Unify SummarizedExperiment output Fix linting from a comment #1283: Issue comment #1465 (comment) created by pinin4fjords

January 16, 2025 14:16

working with gene panels or single genes (e.g., NF1) in the nf-core/rnaseq pipeline Fix linting from a comment #1282: Issue comment #1472 (comment) created by pinin4fjords

January 16, 2025 14:12

Error for single reads during FASTQ linting preprocessing Fix linting from a comment #1281: Issue comment #1483 (comment) created by pinin4fjords

January 16, 2025 14:07

Options for normalisation of RNA-seq Fix linting from a comment #1280: Issue comment #1484 (comment) created by pinin4fjords

January 16, 2025 13:59

/usr/bin/activate: No such file or directory Fix linting from a comment #1279: Issue comment #1485 (comment) created by pinin4fjords

January 16, 2025 13:57

Options for normalisation of RNA-seq Fix linting from a comment #1278: Issue comment #1484 (comment) created by davidecarlson

January 14, 2025 21:18

Bump STAR build for multiprocessing fix Fix linting from a comment #1277: Issue comment #1486 (comment) created by nf-core-bot

January 13, 2025 10:42

Update trimgalore module for save_unpaired fix Fix linting from a comment #1276: Issue comment #1482 (comment) created by pinin4fjords

January 8, 2025 10:47

Update trimgalore module for save_unpaired fix Fix linting from a comment #1275: Issue comment #1482 (comment) created by nf-core-bot

January 6, 2025 16:32

Wrong results without error if saved_trimmed = true Fix linting from a comment #1274: Issue comment #1481 (comment) created by panzhang666666

December 26, 2024 02:34

Pipe line Error with HiSAT2 Aligner Fix linting from a comment #1273: Issue comment #1288 (comment) created by XianSY

December 25, 2024 01:23

Update CHANGELOG.md Fix linting from a comment #1272: Issue comment #1479 (comment) created by nf-core-bot

December 20, 2024 15:55

Important! Template update for nf-core/tools v3.1.0 Fix linting from a comment #1271: Issue comment #1468 (comment) created by nf-core-bot

December 20, 2024 13:10

Update from master Fix linting from a comment #1270: Issue comment #1477 (comment) created by nf-core-bot

December 20, 2024 11:34

Dev -> Master for 3.18.0 Fix linting from a comment #1269: Issue comment #1476 (comment) created by nf-core-bot

December 20, 2024 10:16

Fix log publishing around umitools/ umicollapse Fix linting from a comment #1268: Issue comment #1475 (comment) created by nf-core-bot

December 19, 2024 13:19

Bump versions to 3.18.0 Fix linting from a comment #1267: Issue comment #1474 (comment) created by nf-core-bot

December 19, 2024 11:03

Bump STAR modules Fix linting from a comment #1266: Issue comment #1473 (comment) created by nf-core-bot

December 18, 2024 18:18

Pipeline prefixes X to samplenames Fix linting from a comment #1265: Issue comment #1446 (comment) created by pinin4fjords

December 18, 2024 15:26

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