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ConvGRU2D.py
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"""Convolutional-recurrent GRU layer."""
import numpy as np
from tensorflow.python.keras import activations
from tensorflow.python.keras import backend
from tensorflow.python.keras import constraints
from tensorflow.python.keras import initializers
from tensorflow.python.keras import regularizers
from tensorflow.python.keras.engine.base_layer import Layer
from tensorflow.python.keras.engine.input_spec import InputSpec
from tensorflow.python.keras.layers.recurrent import DropoutRNNCellMixin
from tensorflow.python.keras.layers.recurrent import RNN
from tensorflow.python.keras.utils import conv_utils
from tensorflow.python.keras.utils import generic_utils
from tensorflow.python.keras.utils import tf_utils
from tensorflow.python.ops import array_ops
from tensorflow.python.util.tf_export import keras_export
from tensorflow.python.keras.layers.convolutional_recurrent import ConvRNN2D
class ConvGRU2DCell(DropoutRNNCellMixin, Layer):
"""Cell class for the ConvGRU2DCell layer.
Args:
filters: Integer, the dimensionality of the output space
(i.e. the number of output filters in the convolution).
kernel_size: An integer or tuple/list of n integers, specifying the
dimensions of the convolution window.
strides: An integer or tuple/list of n integers,
specifying the strides of the convolution.
Specifying any stride value != 1 is incompatible with specifying
any `dilation_rate` value != 1.
padding: One of `"valid"` or `"same"` (case-insensitive).
`"valid"` means no padding. `"same"` results in padding evenly to
the left/right or up/down of the input such that output has the same
height/width dimension as the input.
data_format: A string,
one of `channels_last` (default) or `channels_first`.
It defaults to the `image_data_format` value found in your
Keras config file at `~/.keras/keras.json`.
If you never set it, then it will be "channels_last".
dilation_rate: An integer or tuple/list of n integers, specifying
the dilation rate to use for dilated convolution.
Currently, specifying any `dilation_rate` value != 1 is
incompatible with specifying any `strides` value != 1.
activation: Activation function to use.
If you don't specify anything, no activation is applied
(ie. "linear" activation: `a(x) = x`).
recurrent_activation: Activation function to use
for the recurrent step.
use_bias: Boolean, whether the layer uses a bias vector.
kernel_initializer: Initializer for the `kernel` weights matrix,
used for the linear transformation of the inputs.
recurrent_initializer: Initializer for the `recurrent_kernel`
weights matrix,
used for the linear transformation of the recurrent state.
bias_initializer: Initializer for the bias vector.
kernel_regularizer: Regularizer function applied to
the `kernel` weights matrix.
recurrent_regularizer: Regularizer function applied to
the `recurrent_kernel` weights matrix.
bias_regularizer: Regularizer function applied to the bias vector.
kernel_constraint: Constraint function applied to
the `kernel` weights matrix.
recurrent_constraint: Constraint function applied to
the `recurrent_kernel` weights matrix.
bias_constraint: Constraint function applied to the bias vector.
dropout: Float between 0 and 1.
Fraction of the units to drop for
the linear transformation of the inputs.
recurrent_dropout: Float between 0 and 1.
Fraction of the units to drop for
the linear transformation of the recurrent state.
Call arguments:
inputs: A 4D tensor.
states: List of state tensors corresponding to the previous timestep.
training: Python boolean indicating whether the layer should behave in
training mode or in inference mode. Only relevant when `dropout` or
`recurrent_dropout` is used.
"""
def __init__(self,
filters,
kernel_size,
strides=(1, 1),
padding='valid',
data_format=None,
dilation_rate=(1, 1),
activation='tanh',
recurrent_activation='hard_sigmoid',
use_bias=True,
kernel_initializer='glorot_uniform',
recurrent_initializer='orthogonal',
bias_initializer='zeros',
kernel_regularizer=None,
recurrent_regularizer=None,
bias_regularizer=None,
kernel_constraint=None,
recurrent_constraint=None,
bias_constraint=None,
dropout=0.,
recurrent_dropout=0.,
**kwargs):
super(ConvGRU2DCell, self).__init__(**kwargs)
self.filters = filters
self.kernel_size = conv_utils.normalize_tuple(kernel_size, 2, 'kernel_size')
self.strides = conv_utils.normalize_tuple(strides, 2, 'strides')
self.padding = conv_utils.normalize_padding(padding)
self.data_format = conv_utils.normalize_data_format(data_format)
self.dilation_rate = conv_utils.normalize_tuple(dilation_rate, 2,
'dilation_rate')
self.activation = activations.get(activation)
self.recurrent_activation = activations.get(recurrent_activation)
self.use_bias = use_bias
self.kernel_initializer = initializers.get(kernel_initializer)
self.recurrent_initializer = initializers.get(recurrent_initializer)
self.bias_initializer = initializers.get(bias_initializer)
self.kernel_regularizer = regularizers.get(kernel_regularizer)
self.recurrent_regularizer = regularizers.get(recurrent_regularizer)
self.bias_regularizer = regularizers.get(bias_regularizer)
self.kernel_constraint = constraints.get(kernel_constraint)
self.recurrent_constraint = constraints.get(recurrent_constraint)
self.bias_constraint = constraints.get(bias_constraint)
self.dropout = min(1., max(0., dropout))
self.recurrent_dropout = min(1., max(0., recurrent_dropout))
self.state_size = (self.filters)
def build(self, input_shape):
if self.data_format == 'channels_first':
channel_axis = 1
else:
channel_axis = -1
if input_shape[channel_axis] is None:
raise ValueError('The channel dimension of the inputs '
'should be defined. Found `None`.')
input_dim = input_shape[channel_axis]
kernel_shape = self.kernel_size + (input_dim, self.filters * 3)
self.kernel_shape = kernel_shape
recurrent_kernel_shape = self.kernel_size + (self.filters, self.filters * 3)
self.kernel = self.add_weight(shape=kernel_shape,
initializer=self.kernel_initializer,
name='kernel',
regularizer=self.kernel_regularizer,
constraint=self.kernel_constraint)
self.recurrent_kernel = self.add_weight(
shape=recurrent_kernel_shape,
initializer=self.recurrent_initializer,
name='recurrent_kernel',
regularizer=self.recurrent_regularizer,
constraint=self.recurrent_constraint)
if self.use_bias:
bias_initializer = self.bias_initializer
self.bias = self.add_weight(
shape=(self.filters * 3,),
name='bias',
initializer=bias_initializer,
regularizer=self.bias_regularizer,
constraint=self.bias_constraint)
else:
self.bias = None
self.built = True
def call(self, inputs, states, training=None):
h_tm1 = states[0] # previous memory state
# dropout matrices for input units
dp_mask = self.get_dropout_mask_for_cell(inputs, training, count=3)
# dropout matrices for recurrent units
rec_dp_mask = self.get_recurrent_dropout_mask_for_cell(
h_tm1, training, count=3)
if 0 < self.dropout < 1.:
inputs_z = inputs * dp_mask[0]
inputs_r = inputs * dp_mask[1]
inputs_h = inputs * dp_mask[2]
else:
inputs_z = inputs
inputs_r = inputs
inputs_h = inputs
if 0 < self.recurrent_dropout < 1.:
h_tm1_z = h_tm1 * rec_dp_mask[0]
h_tm1_r = h_tm1 * rec_dp_mask[1]
h_tm1_h = h_tm1 * rec_dp_mask[2]
else:
h_tm1_z = h_tm1
h_tm1_r = h_tm1
h_tm1_h = h_tm1
(kernel_z, kernel_r,
kernel_h) = array_ops.split(self.kernel, 3, axis=3)
(recurrent_kernel_z,
recurrent_kernel_r,
recurrent_kernel_h) = array_ops.split(self.recurrent_kernel, 3, axis=3)
if self.use_bias:
bias_z, bias_r, bias_h = array_ops.split(self.bias, 3)
else:
bias_z, bias_r, bias_h = None, None, None
x_z = self.input_conv(inputs_z, kernel_z, bias_z, padding=self.padding)
x_r = self.input_conv(inputs_r, kernel_r, bias_r, padding=self.padding)
x_h = self.input_conv(inputs_h, kernel_h, bias_h, padding=self.padding)
h_z = self.recurrent_conv(h_tm1_z, recurrent_kernel_z)
h_r = self.recurrent_conv(h_tm1_r, recurrent_kernel_r)
h_h = self.recurrent_conv(h_tm1_h, recurrent_kernel_h)
z = self.recurrent_activation(x_z + h_z)
r = self.recurrent_activation(x_r + h_r)
h = (1.0 - z) * h_tm1 + z * self.activation(x_h + h_h)
return h, [h]
def input_conv(self, x, w, b=None, padding='valid'):
conv_out = backend.conv2d(x, w, strides=self.strides,
padding=padding,
data_format=self.data_format,
dilation_rate=self.dilation_rate)
if b is not None:
conv_out = backend.bias_add(conv_out, b,
data_format=self.data_format)
return conv_out
def recurrent_conv(self, x, w):
conv_out = backend.conv2d(x, w, strides=(1, 1),
padding='same',
data_format=self.data_format)
return conv_out
def get_config(self):
config = {'filters': self.filters,
'kernel_size': self.kernel_size,
'strides': self.strides,
'padding': self.padding,
'data_format': self.data_format,
'dilation_rate': self.dilation_rate,
'activation': activations.serialize(self.activation),
'recurrent_activation': activations.serialize(
self.recurrent_activation),
'use_bias': self.use_bias,
'kernel_initializer': initializers.serialize(
self.kernel_initializer),
'recurrent_initializer': initializers.serialize(
self.recurrent_initializer),
'bias_initializer': initializers.serialize(self.bias_initializer),
'kernel_regularizer': regularizers.serialize(
self.kernel_regularizer),
'recurrent_regularizer': regularizers.serialize(
self.recurrent_regularizer),
'bias_regularizer': regularizers.serialize(self.bias_regularizer),
'kernel_constraint': constraints.serialize(
self.kernel_constraint),
'recurrent_constraint': constraints.serialize(
self.recurrent_constraint),
'bias_constraint': constraints.serialize(self.bias_constraint),
'dropout': self.dropout,
'recurrent_dropout': self.recurrent_dropout}
base_config = super(ConvGRU2DCell, self).get_config()
return dict(list(base_config.items()) + list(config.items()))
class ConvGRU2D(ConvRNN2D):
"""2D Convolutional GRU layer.
A convolutional GRU is similar to an GRU, but the input transformations
and recurrent transformations are both convolutional. This layer is typically
used to process timeseries of images (i.e. video-like data).
It is known to perform well for weather data forecasting,
using inputs that are timeseries of 2D grids of sensor values.
It isn't usually applied to regular video data, due to its high computational
cost.
Args:
filters: Integer, the dimensionality of the output space
(i.e. the number of output filters in the convolution).
kernel_size: An integer or tuple/list of n integers, specifying the
dimensions of the convolution window.
strides: An integer or tuple/list of n integers,
specifying the strides of the convolution.
Specifying any stride value != 1 is incompatible with specifying
any `dilation_rate` value != 1.
padding: One of `"valid"` or `"same"` (case-insensitive).
`"valid"` means no padding. `"same"` results in padding evenly to
the left/right or up/down of the input such that output has the same
height/width dimension as the input.
data_format: A string,
one of `channels_last` (default) or `channels_first`.
The ordering of the dimensions in the inputs.
`channels_last` corresponds to inputs with shape
`(batch, time, ..., channels)`
while `channels_first` corresponds to
inputs with shape `(batch, time, channels, ...)`.
It defaults to the `image_data_format` value found in your
Keras config file at `~/.keras/keras.json`.
If you never set it, then it will be "channels_last".
dilation_rate: An integer or tuple/list of n integers, specifying
the dilation rate to use for dilated convolution.
Currently, specifying any `dilation_rate` value != 1 is
incompatible with specifying any `strides` value != 1.
activation: Activation function to use.
By default hyperbolic tangent activation function is applied
(`tanh(x)`).
recurrent_activation: Activation function to use
for the recurrent step.
use_bias: Boolean, whether the layer uses a bias vector.
kernel_initializer: Initializer for the `kernel` weights matrix,
used for the linear transformation of the inputs.
recurrent_initializer: Initializer for the `recurrent_kernel`
weights matrix,
used for the linear transformation of the recurrent state.
bias_initializer: Initializer for the bias vector.
kernel_regularizer: Regularizer function applied to
the `kernel` weights matrix.
recurrent_regularizer: Regularizer function applied to
the `recurrent_kernel` weights matrix.
bias_regularizer: Regularizer function applied to the bias vector.
activity_regularizer: Regularizer function applied to.
kernel_constraint: Constraint function applied to
the `kernel` weights matrix.
recurrent_constraint: Constraint function applied to
the `recurrent_kernel` weights matrix.
bias_constraint: Constraint function applied to the bias vector.
return_sequences: Boolean. Whether to return the last output
in the output sequence, or the full sequence. (default False)
return_state: Boolean Whether to return the last state
in addition to the output. (default False)
go_backwards: Boolean (default False).
If True, process the input sequence backwards.
stateful: Boolean (default False). If True, the last state
for each sample at index i in a batch will be used as initial
state for the sample of index i in the following batch.
dropout: Float between 0 and 1.
Fraction of the units to drop for
the linear transformation of the inputs.
recurrent_dropout: Float between 0 and 1.
Fraction of the units to drop for
the linear transformation of the recurrent state.
Call arguments:
inputs: A 5D float tensor (see input shape description below).
mask: Binary tensor of shape `(samples, timesteps)` indicating whether
a given timestep should be masked.
training: Python boolean indicating whether the layer should behave in
training mode or in inference mode. This argument is passed to the cell
when calling it. This is only relevant if `dropout` or `recurrent_dropout`
are set.
initial_state: List of initial state tensors to be passed to the first
call of the cell.
Input shape:
- If data_format='channels_first'
5D tensor with shape:
`(samples, time, channels, rows, cols)`
- If data_format='channels_last'
5D tensor with shape:
`(samples, time, rows, cols, channels)`
Output shape:
- If `return_state`: a list of tensors. The first tensor is
the output. The remaining tensors are the last states,
each 4D tensor with shape:
`(samples, filters, new_rows, new_cols)`
if data_format='channels_first'
or 4D tensor with shape:
`(samples, new_rows, new_cols, filters)`
if data_format='channels_last'.
`rows` and `cols` values might have changed due to padding.
- If `return_sequences`: 5D tensor with shape:
`(samples, timesteps, filters, new_rows, new_cols)`
if data_format='channels_first'
or 5D tensor with shape:
`(samples, timesteps, new_rows, new_cols, filters)`
if data_format='channels_last'.
- Else, 4D tensor with shape:
`(samples, filters, new_rows, new_cols)`
if data_format='channels_first'
or 4D tensor with shape:
`(samples, new_rows, new_cols, filters)`
if data_format='channels_last'.
Raises:
ValueError: in case of invalid constructor arguments.
References:
- [Shi et al., 2015](http://arxiv.org/abs/1506.04214v1)
(the current implementation does not include the feedback loop on the
cells output).
Example:
```python
steps = 10
height = 32
width = 32
input_channels = 3
output_channels = 6
inputs = tf.keras.Input(shape=(steps, height, width, input_channels))
layer = ConvGRU2D.ConvGRU2D(filters=output_channels, kernel_size=3)
outputs = layer(inputs)
```
"""
def __init__(self,
filters,
kernel_size,
strides=(1, 1),
padding='valid',
data_format=None,
dilation_rate=(1, 1),
activation='tanh',
recurrent_activation='hard_sigmoid',
use_bias=True,
kernel_initializer='glorot_uniform',
recurrent_initializer='orthogonal',
bias_initializer='zeros',
kernel_regularizer=None,
recurrent_regularizer=None,
bias_regularizer=None,
activity_regularizer=None,
kernel_constraint=None,
recurrent_constraint=None,
bias_constraint=None,
return_sequences=False,
return_state=False,
go_backwards=False,
stateful=False,
dropout=0.,
recurrent_dropout=0.,
**kwargs):
cell = ConvGRU2DCell(filters=filters,
kernel_size=kernel_size,
strides=strides,
padding=padding,
data_format=data_format,
dilation_rate=dilation_rate,
activation=activation,
recurrent_activation=recurrent_activation,
use_bias=use_bias,
kernel_initializer=kernel_initializer,
recurrent_initializer=recurrent_initializer,
bias_initializer=bias_initializer,
kernel_regularizer=kernel_regularizer,
recurrent_regularizer=recurrent_regularizer,
bias_regularizer=bias_regularizer,
kernel_constraint=kernel_constraint,
recurrent_constraint=recurrent_constraint,
bias_constraint=bias_constraint,
dropout=dropout,
recurrent_dropout=recurrent_dropout,
dtype=kwargs.get('dtype'))
super(ConvGRU2D, self).__init__(cell,
return_sequences=return_sequences,
return_state=return_state,
go_backwards=go_backwards,
stateful=stateful,
**kwargs)
self.activity_regularizer = regularizers.get(activity_regularizer)
def call(self, inputs, mask=None, training=None, initial_state=None):
return super(ConvGRU2D, self).call(inputs,
mask=mask,
training=training,
initial_state=initial_state)
@property
def filters(self):
return self.cell.filters
@property
def kernel_size(self):
return self.cell.kernel_size
@property
def strides(self):
return self.cell.strides
@property
def padding(self):
return self.cell.padding
@property
def data_format(self):
return self.cell.data_format
@property
def dilation_rate(self):
return self.cell.dilation_rate
@property
def activation(self):
return self.cell.activation
@property
def recurrent_activation(self):
return self.cell.recurrent_activation
@property
def use_bias(self):
return self.cell.use_bias
@property
def kernel_initializer(self):
return self.cell.kernel_initializer
@property
def recurrent_initializer(self):
return self.cell.recurrent_initializer
@property
def bias_initializer(self):
return self.cell.bias_initializer
@property
def kernel_regularizer(self):
return self.cell.kernel_regularizer
@property
def recurrent_regularizer(self):
return self.cell.recurrent_regularizer
@property
def bias_regularizer(self):
return self.cell.bias_regularizer
@property
def kernel_constraint(self):
return self.cell.kernel_constraint
@property
def recurrent_constraint(self):
return self.cell.recurrent_constraint
@property
def bias_constraint(self):
return self.cell.bias_constraint
@property
def dropout(self):
return self.cell.dropout
@property
def recurrent_dropout(self):
return self.cell.recurrent_dropout
def get_config(self):
config = {'filters': self.filters,
'kernel_size': self.kernel_size,
'strides': self.strides,
'padding': self.padding,
'data_format': self.data_format,
'dilation_rate': self.dilation_rate,
'activation': activations.serialize(self.activation),
'recurrent_activation': activations.serialize(
self.recurrent_activation),
'use_bias': self.use_bias,
'kernel_initializer': initializers.serialize(
self.kernel_initializer),
'recurrent_initializer': initializers.serialize(
self.recurrent_initializer),
'bias_initializer': initializers.serialize(self.bias_initializer),
'kernel_regularizer': regularizers.serialize(
self.kernel_regularizer),
'recurrent_regularizer': regularizers.serialize(
self.recurrent_regularizer),
'bias_regularizer': regularizers.serialize(self.bias_regularizer),
'activity_regularizer': regularizers.serialize(
self.activity_regularizer),
'kernel_constraint': constraints.serialize(
self.kernel_constraint),
'recurrent_constraint': constraints.serialize(
self.recurrent_constraint),
'bias_constraint': constraints.serialize(self.bias_constraint),
'dropout': self.dropout,
'recurrent_dropout': self.recurrent_dropout}
base_config = super(ConvGRU2D, self).get_config()
del base_config['cell']
return dict(list(base_config.items()) + list(config.items()))
@classmethod
def from_config(cls, config):
return cls(**config)