From 8c4dc34256713fcc80fefda0c3898828f0f8b919 Mon Sep 17 00:00:00 2001
From: mos <realeandrea@yahoo.it>
Date: Thu, 13 Jun 2024 23:09:23 +0200
Subject: [PATCH] .

.

.

.
---
 pom.xml                                       | 25 ++++++++++---------
 .../src/main/assembly/dependency-sets.xml     |  2 +-
 .../src/main/assembly/protege-os-x.xml        |  2 +-
 protege-editor-owl/pom.xml                    |  4 +--
 protege-launcher/pom.xml                      |  5 ----
 5 files changed, 17 insertions(+), 21 deletions(-)

diff --git a/pom.xml b/pom.xml
index 839bed049..586cd56e3 100644
--- a/pom.xml
+++ b/pom.xml
@@ -126,10 +126,10 @@
 	<properties>
 	    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
 		<maven.javadoc.failOnError>false</maven.javadoc.failOnError>
-		<slf4j.version>1.7.32</slf4j.version>
+		<slf4j.version>1.7.36</slf4j.version>
 		<logback.version>1.2.13</logback.version>
 		<lib.location>target/lib</lib.location>
-		<jackson.version>2.9.8</jackson.version>
+		<jackson.version>2.13.5</jackson.version>
 	</properties>
 	
 	<dependencyManagement>
@@ -204,7 +204,7 @@
 			<dependency>
 				<groupId>org.eclipse.equinox</groupId>
 				<artifactId>org.eclipse.equinox.registry</artifactId>
-				<version>3.5.0.v20100503</version>
+				<version>3.5.101</version>
 			</dependency>
 			
 			<dependency>
@@ -213,12 +213,6 @@
 				<version>1.3.0.20100503</version>
 			</dependency>
 
-			<dependency>
-				<groupId>org.apache.servicemix.bundles</groupId>
-				<artifactId>org.apache.servicemix.bundles.aopalliance</artifactId>
-				<version>1.0_6</version>
-			</dependency>
-
 			<dependency>
 				<groupId>org.apache.servicemix.bundles</groupId>
 				<artifactId>org.apache.servicemix.bundles.javax-inject</artifactId>
@@ -237,6 +231,13 @@
 				<version>2.7</version>
 			</dependency>
 
+			<dependency>
+    				<groupId>commons-codec</groupId>
+    				<artifactId>commons-codec</artifactId>
+    				<version>1.16.0</version>
+			</dependency>
+
+
 			<dependency>
 				<groupId>edu.stanford.protege</groupId>
 				<artifactId>org.protege.xmlcatalog</artifactId>
@@ -256,13 +257,13 @@
 			<dependency>
 				<groupId>org.eclipse.jgit</groupId>
 				<artifactId>org.eclipse.jgit</artifactId>
-				<version>6.6.1.202309021850-r</version>
+				<version>6.7.0.202309050840-r</version>
 			</dependency>
 
 			<dependency>
 				<groupId>com.googlecode.javaewah</groupId>
 				<artifactId>JavaEWAH</artifactId>
-				<version>1.1.13</version>
+				<version>1.2.3</version>
 			</dependency>
 			
 			<dependency>
@@ -311,7 +312,7 @@
 			<dependency>	
 			  	<groupId>jakarta.xml.bind</groupId>
     				<artifactId>jakarta.xml.bind-api</artifactId>	
-			  	<version>2.3.3</version>	
+			  	<version>3.0.1</version>	
 			</dependency>	
 
 			<dependency>	
diff --git a/protege-desktop/src/main/assembly/dependency-sets.xml b/protege-desktop/src/main/assembly/dependency-sets.xml
index cebad58ab..9c8aaa6a8 100644
--- a/protege-desktop/src/main/assembly/dependency-sets.xml
+++ b/protege-desktop/src/main/assembly/dependency-sets.xml
@@ -22,8 +22,8 @@
                 <include>org.slf4j:log4j-over-slf4j:jar</include>
                 <include>org.slf4j:jul-to-slf4j:jar</include>
                 <include>commons-io:commons-io:jar</include>
+                <include>commons-codec:commons-codec</include>
                 <include>org.apache.servicemix.bundles:org.apache.servicemix.bundles.javax-inject:jar</include>
-                <include>org.apache.servicemix.bundles:org.apache.servicemix.bundles.aopalliance:jar</include>
                 <include>org.eclipse.jgit:org.eclipse.jgit:jar</include>
                 <include>com.googlecode.javaewah:JavaEWAH:jar</include>
                 <include>javax.xml.bind:jaxb-api:jar</include>	
diff --git a/protege-desktop/src/main/assembly/protege-os-x.xml b/protege-desktop/src/main/assembly/protege-os-x.xml
index 553652170..47e8d13e0 100644
--- a/protege-desktop/src/main/assembly/protege-os-x.xml
+++ b/protege-desktop/src/main/assembly/protege-os-x.xml
@@ -30,8 +30,8 @@
                 <include>org.slf4j:log4j-over-slf4j:jar</include>
                 <include>org.slf4j:jul-to-slf4j:jar</include>
                 <include>commons-io:commons-io:jar</include>
+                <include>commons-codec:commons-codec</include>
                 <include>org.apache.servicemix.bundles:org.apache.servicemix.bundles.javax-inject:jar</include>
-                <include>org.apache.servicemix.bundles:org.apache.servicemix.bundles.aopalliance:jar</include>
                 <include>org.eclipse.jgit:org.eclipse.jgit:jar</include>
                 <include>com.googlecode.javaewah:JavaEWAH:jar</include>
                 <include>javax.xml.bind:jaxb-api:jar</include>
diff --git a/protege-editor-owl/pom.xml b/protege-editor-owl/pom.xml
index 6a94f125e..d03c2447b 100644
--- a/protege-editor-owl/pom.xml
+++ b/protege-editor-owl/pom.xml
@@ -18,7 +18,7 @@
     
     <properties>
         <jzlib.version>1.1.3</jzlib.version>
-		<jsch.version>0.1.55</jsch.version>
+		<jsch.version>0.1.64</jsch.version>
 	</properties>
     
     <dependencies>
@@ -150,7 +150,7 @@
         </dependency>
 
         <dependency>
-            <groupId>com.jcraft</groupId>
+            <groupId>com.github.mwiede</groupId>
             <artifactId>jsch</artifactId>
             <version>${jsch.version}</version>
             <scope>provided</scope>
diff --git a/protege-launcher/pom.xml b/protege-launcher/pom.xml
index c1161eb03..ffc673eea 100644
--- a/protege-launcher/pom.xml
+++ b/protege-launcher/pom.xml
@@ -72,11 +72,6 @@
 			<artifactId>org.eclipse.equinox.common</artifactId>
 		</dependency>
 
-		<dependency>
-			<groupId>org.apache.servicemix.bundles</groupId>
-			<artifactId>org.apache.servicemix.bundles.aopalliance</artifactId>
-		</dependency>
-
 		<dependency>
 			<groupId>org.apache.servicemix.bundles</groupId>
 			<artifactId>org.apache.servicemix.bundles.javax-inject</artifactId>