Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

vcf2counts picks up rsID instead of chr+position #18

Closed
famosab opened this issue Jan 29, 2025 · 0 comments · Fixed by #22
Closed

vcf2counts picks up rsID instead of chr+position #18

famosab opened this issue Jan 29, 2025 · 0 comments · Fixed by #22
Labels
bug Something isn't working

Comments

@famosab
Copy link
Collaborator

famosab commented Jan 29, 2025

Description of the bug

When a vcf file comes with rsIDs the vcf2counts script picks the rsIDs instead of the chr and position of the variant.

@famosab famosab added the bug Something isn't working label Jan 29, 2025
@famosab famosab linked a pull request Jan 29, 2025 that will close this issue
10 tasks
@famosab famosab removed a link to a pull request Jan 31, 2025
10 tasks
@famosab famosab linked a pull request Jan 31, 2025 that will close this issue
10 tasks
@famosab famosab closed this as completed Feb 3, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

Successfully merging a pull request may close this issue.

1 participant