diff --git a/workflow/rules/eval.smk b/workflow/rules/eval.smk index 624ff73..a82c62d 100644 --- a/workflow/rules/eval.smk +++ b/workflow/rules/eval.smk @@ -93,11 +93,11 @@ rule remove_non_pass: rule calculate_vaf: input: - "results/filtered-variants/{callset}.bcf" + "results/filtered-variants/{callset}.bcf", output: - "results/calculate-vaf/{callset}.added-vaf.bcf" + "results/calculate-vaf/{callset}.added-vaf.bcf", log: - "logs/calculate-vaf/" + "logs/calculate-vaf/", conda: "../envs/cyvcf.yaml" script: