docker-compose.yml

version: "3.2"

services:
  rstudio-workbench-hpc: 
    build:
      context: .
      dockerfile: workbench.docker
      args: 
        - SLURM_VERSION=${SLURM_VERSION:-23.02.7}
        - RSW_VERSION=${PWB_VERSION:-2024.04.2}
        - OS_VERSION=${OS_VERSION:-ubuntu2204}
    image: rstudio-workbench-hpc:bionic-rsw-${PWB_VERSION:-2024.04.2}-slurm-${SLURM_VERSION:-23.02.7}
    hostname: rstudio-workbench
    privileged: true 
    volumes:
      - type: bind
        source: /etc/passwd
        target: /etc/passwd
      - type: bind 
        source: /etc/shadow
        target: /etc/shadow
      - type: bind
        source: /etc/group
        target: /etc/group
      - ./etc/rserver.conf:/etc/rstudio/rserver.conf
      - ./etc/launcher.conf:/etc/rstudio/launcher.conf
      - ./etc/launcher.slurm.conf:/etc/rstudio/launcher.slurm.conf
      - ./etc/launcher.slurm.profiles.conf:/etc/rstudio/launcher.slurm.profiles.conf  
      - ./etc/jupyter.conf:/etc/rstudio/jupyter.conf
      - /opt/slurm/etc:/opt/slurm/etc
      - /etc/sssd/sssd.conf:/etc/sssd/sssd.conf
      - type: bind
        source: /home
        target: /home
      - type: bind 
        source: /shared
        target: /shared
    ports:
      - "8787:8787"
    environment:
      RSP_LICENSE: ${RSP_LICENSE}