From 7b913b9cf4ef844042ab6e69917e36d5a6daeec5 Mon Sep 17 00:00:00 2001
From: Julien Cohen-Adad <jcohen@polymtl.ca>
Date: Sun, 27 Oct 2024 14:30:58 -0400
Subject: [PATCH] Update run_notebooks.yml

Adding --allow-errors to nbconvert to get notebooks even if errors
---
 .github/workflows/run_notebooks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_notebooks.yml b/.github/workflows/run_notebooks.yml
index afd6329..02f83ba 100644
--- a/.github/workflows/run_notebooks.yml
+++ b/.github/workflows/run_notebooks.yml
@@ -40,7 +40,7 @@ jobs:
           mkdir -p executed_notebooks
           for notebook in $(find . -name "*.ipynb"); do
             echo "Executing $notebook"
-            jupyter nbconvert --to notebook --execute --inplace \
+            jupyter nbconvert --to notebook --execute --allow-errors --inplace \
               --output executed_notebooks/$(basename $notebook) $notebook \
               2>&1 | tee -a notebook_execution.log || echo "Execution failed for $notebook"
           done