From def9a9e934ab8bf5c5da679131992abae99593ea Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Mon, 26 Dec 2022 05:37:18 +0000
Subject: [PATCH] [DEPENDABOT]: Bump pre-commit from 2.12.0 to 2.21.0

Bumps [pre-commit](https://github.com/pre-commit/pre-commit) from 2.12.0 to 2.21.0.
- [Release notes](https://github.com/pre-commit/pre-commit/releases)
- [Changelog](https://github.com/pre-commit/pre-commit/blob/main/CHANGELOG.md)
- [Commits](https://github.com/pre-commit/pre-commit/compare/v2.12.0...v2.21.0)

---
updated-dependencies:
- dependency-name: pre-commit
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 poetry.lock    | 343 +++++++++++++++++++++++++++----------------------
 pyproject.toml |   2 +-
 2 files changed, 193 insertions(+), 152 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 31dc16d1..67d04de5 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -18,7 +18,7 @@ optional = false
 python-versions = "*"
 
 [package.extras]
-test = ["pytest (>=3.0)", "pytest-cov", "pydocstyle", "coveralls"]
+test = ["coveralls", "pydocstyle", "pytest (>=3.0)", "pytest-cov"]
 
 [[package]]
 name = "alabaster"
@@ -47,9 +47,9 @@ scipy = ">1.4"
 xlrd = "<2.0"
 
 [package.extras]
-dev = ["setuptools-scm", "pytoml", "black (>=20.8b1)", "docutils"]
-doc = ["sphinx (>=2.0.1)", "sphinx-rtd-theme", "sphinx-autodoc-typehints (>=1.11.0)", "sphinx-issues", "scanpydoc (>=0.5)", "typing-extensions"]
-test = ["loompy (>=3.0.5)", "pytest (>=6.0)", "pytest-cov (>=2.10)", "zarr", "matplotlib", "sklearn", "xlrd", "joblib", "boltons", "scanpy"]
+dev = ["black (>=20.8b1)", "docutils", "pytoml", "setuptools_scm"]
+doc = ["scanpydoc (>=0.5)", "sphinx (>=2.0.1)", "sphinx-autodoc-typehints (>=1.11.0)", "sphinx-rtd-theme", "sphinx_issues", "typing_extensions"]
+test = ["boltons", "joblib", "loompy (>=3.0.5)", "matplotlib", "pytest (>=6.0)", "pytest-cov (>=2.10)", "scanpy", "sklearn", "xlrd", "zarr"]
 
 [[package]]
 name = "appdirs"
@@ -80,7 +80,7 @@ cffi = ">=1.0.0"
 six = "*"
 
 [package.extras]
-dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pytest", "sphinx", "wheel", "pre-commit"]
+dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pre-commit", "pytest", "sphinx", "wheel"]
 docs = ["sphinx"]
 tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pytest"]
 
@@ -113,6 +113,7 @@ python-versions = "*"
 
 [package.dependencies]
 six = ">=1.6.1,<2.0"
+wheel = ">=0.23.0,<1.0"
 
 [[package]]
 name = "async-generator"
@@ -139,10 +140,10 @@ optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [package.extras]
-dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "furo", "sphinx", "pre-commit"]
+dev = ["coverage[toml] (>=5.0.2)", "furo", "hypothesis", "pre-commit", "pympler", "pytest (>=4.3.0)", "six", "sphinx", "zope.interface"]
 docs = ["furo", "sphinx", "zope.interface"]
 tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"]
-tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six"]
+tests-no-zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six"]
 
 [[package]]
 name = "babel"
@@ -197,9 +198,9 @@ sparse = "*"
 toolz = "*"
 
 [package.extras]
-docs = ["sphinx", "sphinx-autodoc-typehints", "sphinx-rtd-theme", "jinja2", "docutils"]
+docs = ["docutils", "jinja2", "sphinx", "sphinx-autodoc-typehints", "sphinx-rtd-theme"]
 optional = ["tensorflow (>=1.14.0)", "tensorflow-gpu (>=1.14.0)"]
-plotting_deps = ["matplotlib", "seaborn"]
+plotting-deps = ["matplotlib", "seaborn"]
 
 [[package]]
 name = "black"
@@ -307,7 +308,7 @@ python-versions = "*"
 click = ">=4.0"
 
 [package.extras]
-dev = ["pytest (>=3.6)", "pytest-cov", "wheel", "coveralls"]
+dev = ["coveralls", "pytest (>=3.6)", "pytest-cov", "wheel"]
 
 [[package]]
 name = "cligj"
@@ -439,13 +440,13 @@ scipy = ">=1.2.1"
 statsmodels = "*"
 
 [package.extras]
-docs = ["sphinx", "sphinx-autodoc-typehints", "sphinx-rtd-theme", "jinja2", "docutils"]
+docs = ["docutils", "jinja2", "sphinx", "sphinx-autodoc-typehints", "sphinx-rtd-theme"]
 optional = ["anndata"]
-plotting_deps = ["seaborn", "matplotlib"]
+plotting-deps = ["matplotlib", "seaborn"]
 
 [[package]]
 name = "distlib"
-version = "0.3.1"
+version = "0.3.6"
 description = "Distribution utilities"
 category = "dev"
 optional = false
@@ -507,7 +508,7 @@ pygments = ">=2.6.1"
 typing-extensions = ">=3.7.4.3"
 
 [package.extras]
-all = ["sphinx-toolbox (>=1.2.0)", "sphinx (>=3.0.3,<3.4.0)"]
+all = ["sphinx (>=3.0.3,<3.4.0)", "sphinx-toolbox (>=1.2.0)"]
 sphinx = ["sphinx (>=3.0.3,<3.4.0)", "sphinx-toolbox (>=1.2.0)"]
 
 [[package]]
@@ -523,11 +524,15 @@ six = "*"
 
 [[package]]
 name = "filelock"
-version = "3.0.12"
+version = "3.8.2"
 description = "A platform independent file lock."
 category = "dev"
 optional = false
-python-versions = "*"
+python-versions = ">=3.7"
+
+[package.extras]
+docs = ["furo (>=2022.9.29)", "sphinx (>=5.3)", "sphinx-autodoc-typehints (>=1.19.5)"]
+testing = ["covdefaults (>=2.2.2)", "coverage (>=6.5)", "pytest (>=7.2)", "pytest-cov (>=4)", "pytest-timeout (>=2.1)"]
 
 [[package]]
 name = "flake8"
@@ -570,7 +575,7 @@ attrs = ">=19.2.0"
 flake8 = ">=3.0.0"
 
 [package.extras]
-dev = ["coverage", "black", "hypothesis", "hypothesmith"]
+dev = ["black", "coverage", "hypothesis", "hypothesmith"]
 
 [[package]]
 name = "flake8-docstrings"
@@ -628,14 +633,14 @@ python-versions = ">=3.6"
 abfs = ["adlfs"]
 adl = ["adlfs"]
 dask = ["dask", "distributed"]
-dropbox = ["dropboxdrivefs", "requests", "dropbox"]
+dropbox = ["dropbox", "dropboxdrivefs", "requests"]
 entrypoints = ["importlib-metadata"]
 gcs = ["gcsfs"]
 git = ["pygit2"]
 github = ["requests"]
 gs = ["gcsfs"]
 hdfs = ["pyarrow (>=1)"]
-http = ["requests", "aiohttp"]
+http = ["aiohttp", "requests"]
 s3 = ["s3fs"]
 sftp = ["paramiko"]
 smb = ["smbprotocol"]
@@ -683,10 +688,11 @@ python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*"
 cachetools = ">=2.0.0,<5.0"
 pyasn1-modules = ">=0.2.1"
 rsa = {version = ">=3.1.4,<5", markers = "python_version >= \"3.6\""}
+setuptools = ">=40.3.0"
 six = ">=1.9.0"
 
 [package.extras]
-aiohttp = ["requests (>=2.20.0,<3.0.0dev)", "aiohttp (>=3.6.2,<4.0.0dev)"]
+aiohttp = ["aiohttp (>=3.6.2,<4.0.0dev)", "requests (>=2.20.0,<3.0.0dev)"]
 pyopenssl = ["pyopenssl (>=20.0.0)"]
 reauth = ["pyu2f (>=0.1.5)"]
 
@@ -793,19 +799,20 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "importlib-metadata"
-version = "3.10.0"
+version = "5.2.0"
 description = "Read metadata from Python packages"
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
 typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""}
 zipp = ">=0.5"
 
 [package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pep517", "pyfakefs", "flufl.flake8", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources (>=1.3)"]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+perf = ["ipython"]
+testing = ["flake8 (<5)", "flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"]
 
 [[package]]
 name = "inflect"
@@ -816,8 +823,8 @@ optional = false
 python-versions = ">=3.6"
 
 [package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=1.2.3)", "pytest-flake8", "pytest-cov", "pytest-enabler", "pygments", "pytest-black (>=0.3.7)", "pytest-mypy"]
+docs = ["jaraco.packaging (>=8.2)", "rst.linker (>=1.9)", "sphinx"]
+testing = ["pygments", "pytest (>=4.6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=1.2.3)", "pytest-cov", "pytest-enabler", "pytest-flake8", "pytest-mypy"]
 
 [[package]]
 name = "iniconfig"
@@ -843,7 +850,7 @@ tornado = ">=4.2"
 traitlets = ">=4.1.0"
 
 [package.extras]
-test = ["pytest (!=5.3.4)", "pytest-cov", "flaky", "nose", "jedi (<=0.17.2)"]
+test = ["flaky", "jedi (<=0.17.2)", "nose", "pytest (!=5.3.4)", "pytest-cov"]
 
 [[package]]
 name = "ipython"
@@ -864,6 +871,7 @@ pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
 pickleshare = "*"
 prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0"
 pygments = "*"
+setuptools = ">=18.5"
 traitlets = ">=4.2"
 
 [package.extras]
@@ -872,10 +880,10 @@ doc = ["Sphinx (>=1.3)"]
 kernel = ["ipykernel"]
 nbconvert = ["nbconvert"]
 nbformat = ["nbformat"]
-notebook = ["notebook", "ipywidgets"]
+notebook = ["ipywidgets", "notebook"]
 parallel = ["ipyparallel"]
 qtconsole = ["qtconsole"]
-test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy (>=1.17)"]
+test = ["ipykernel", "nbformat", "nose (>=0.10.1)", "numpy (>=1.17)", "pygments", "requests", "testpath"]
 
 [[package]]
 name = "ipython-genutils"
@@ -902,7 +910,7 @@ traitlets = ">=4.3.1"
 widgetsnbextension = ">=3.5.0,<3.6.0"
 
 [package.extras]
-test = ["pytest (>=3.6.0)", "pytest-cov", "mock"]
+test = ["mock", "pytest (>=3.6.0)", "pytest-cov"]
 
 [[package]]
 name = "jedi"
@@ -953,11 +961,12 @@ python-versions = "*"
 attrs = ">=17.4.0"
 importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
 pyrsistent = ">=0.14.0"
+setuptools = "*"
 six = ">=1.11.0"
 
 [package.extras]
 format = ["idna", "jsonpointer (>1.13)", "rfc3987", "strict-rfc3339", "webcolors"]
-format_nongpl = ["idna", "jsonpointer (>1.13)", "webcolors", "rfc3986-validator (>0.1.0)", "rfc3339-validator"]
+format-nongpl = ["idna", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "webcolors"]
 
 [[package]]
 name = "jupyter-client"
@@ -977,7 +986,7 @@ traitlets = "*"
 
 [package.extras]
 doc = ["sphinx (>=1.3.6)", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
-test = ["async-generator", "ipykernel", "ipython", "mock", "pytest-asyncio", "pytest-timeout", "pytest", "mypy", "pre-commit", "jedi (<0.18)"]
+test = ["async-generator", "ipykernel", "ipython", "jedi (<0.18)", "mock", "mypy", "pre-commit", "pytest", "pytest-asyncio", "pytest-timeout"]
 
 [[package]]
 name = "jupyter-core"
@@ -1031,9 +1040,9 @@ numpy = ">=1.9.1"
 six = ">=1.9.0"
 
 [package.extras]
-image = ["scipy (>=0.14)", "Pillow (>=5.2.0)"]
+image = ["Pillow (>=5.2.0)", "scipy (>=0.14)"]
 pep8 = ["flake8"]
-tests = ["pandas", "pillow", "tensorflow", "keras", "pytest", "pytest-xdist", "pytest-cov"]
+tests = ["Pillow", "keras", "pandas", "pytest", "pytest-cov", "pytest-xdist", "tensorflow"]
 
 [[package]]
 name = "kiwisolver"
@@ -1210,9 +1219,9 @@ nest-asyncio = "*"
 traitlets = ">=4.2"
 
 [package.extras]
-dev = ["codecov", "coverage", "ipython", "ipykernel", "ipywidgets", "pytest (>=4.1)", "pytest-cov (>=2.6.1)", "check-manifest", "flake8", "mypy", "tox", "bumpversion", "xmltodict", "pip (>=18.1)", "wheel (>=0.31.0)", "setuptools (>=38.6.0)", "twine (>=1.11.0)", "black"]
-sphinx = ["Sphinx (>=1.7)", "sphinx-book-theme", "mock", "moto", "myst-parser"]
-test = ["codecov", "coverage", "ipython", "ipykernel", "ipywidgets", "pytest (>=4.1)", "pytest-cov (>=2.6.1)", "check-manifest", "flake8", "mypy", "tox", "bumpversion", "xmltodict", "pip (>=18.1)", "wheel (>=0.31.0)", "setuptools (>=38.6.0)", "twine (>=1.11.0)", "black"]
+dev = ["black", "bumpversion", "check-manifest", "codecov", "coverage", "flake8", "ipykernel", "ipython", "ipywidgets", "mypy", "pip (>=18.1)", "pytest (>=4.1)", "pytest-cov (>=2.6.1)", "setuptools (>=38.6.0)", "tox", "twine (>=1.11.0)", "wheel (>=0.31.0)", "xmltodict"]
+sphinx = ["Sphinx (>=1.7)", "mock", "moto", "myst-parser", "sphinx-book-theme"]
+test = ["black", "bumpversion", "check-manifest", "codecov", "coverage", "flake8", "ipykernel", "ipython", "ipywidgets", "mypy", "pip (>=18.1)", "pytest (>=4.1)", "pytest-cov (>=2.6.1)", "setuptools (>=38.6.0)", "tox", "twine (>=1.11.0)", "wheel (>=0.31.0)", "xmltodict"]
 
 [[package]]
 name = "nbconvert"
@@ -1238,10 +1247,10 @@ testpath = "*"
 traitlets = ">=4.2"
 
 [package.extras]
-all = ["pytest", "pytest-cov", "pytest-dependency", "ipykernel", "ipywidgets (>=7)", "pyppeteer (==0.2.2)", "tornado (>=4.0)", "sphinx (>=1.5.1)", "sphinx-rtd-theme", "nbsphinx (>=0.2.12)", "ipython"]
-docs = ["sphinx (>=1.5.1)", "sphinx-rtd-theme", "nbsphinx (>=0.2.12)", "ipython"]
+all = ["ipykernel", "ipython", "ipywidgets (>=7)", "nbsphinx (>=0.2.12)", "pyppeteer (==0.2.2)", "pytest", "pytest-cov", "pytest-dependency", "sphinx (>=1.5.1)", "sphinx-rtd-theme", "tornado (>=4.0)"]
+docs = ["ipython", "nbsphinx (>=0.2.12)", "sphinx (>=1.5.1)", "sphinx-rtd-theme"]
 serve = ["tornado (>=4.0)"]
-test = ["pytest", "pytest-cov", "pytest-dependency", "ipykernel", "ipywidgets (>=7)", "pyppeteer (==0.2.2)"]
+test = ["ipykernel", "ipywidgets (>=7)", "pyppeteer (==0.2.2)", "pytest", "pytest-cov", "pytest-dependency"]
 webpdf = ["pyppeteer (==0.2.2)"]
 
 [[package]]
@@ -1260,7 +1269,7 @@ traitlets = ">=4.1"
 
 [package.extras]
 fast = ["fastjsonschema"]
-test = ["check-manifest", "fastjsonschema", "testpath", "pytest", "pytest-cov"]
+test = ["check-manifest", "fastjsonschema", "pytest", "pytest-cov", "testpath"]
 
 [[package]]
 name = "nest-asyncio"
@@ -1282,7 +1291,7 @@ python-versions = ">=3.6"
 decorator = ">=4.3,<5"
 
 [package.extras]
-all = ["numpy", "scipy", "pandas", "matplotlib", "pygraphviz", "pydot", "pyyaml", "lxml", "pytest"]
+all = ["lxml", "matplotlib", "numpy", "pandas", "pydot", "pygraphviz", "pytest", "pyyaml", "scipy"]
 gdal = ["gdal"]
 lxml = ["lxml"]
 matplotlib = ["matplotlib"]
@@ -1327,9 +1336,9 @@ tornado = ">=6.1"
 traitlets = ">=4.2.1"
 
 [package.extras]
-docs = ["sphinx", "nbsphinx", "sphinxcontrib-github-alt", "sphinx-rtd-theme", "myst-parser"]
+docs = ["myst-parser", "nbsphinx", "sphinx", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
 json-logging = ["json-logging"]
-test = ["pytest", "coverage", "requests", "nbval", "selenium", "pytest-cov", "requests-unixsocket"]
+test = ["coverage", "nbval", "pytest", "pytest-cov", "requests", "requests-unixsocket", "selenium"]
 
 [[package]]
 name = "numba"
@@ -1342,6 +1351,7 @@ python-versions = ">=3.6"
 [package.dependencies]
 llvmlite = ">=0.34.0.dev0,<0.35"
 numpy = ">=1.15"
+setuptools = "*"
 
 [[package]]
 name = "numcodecs"
@@ -1410,8 +1420,8 @@ urllib3 = ">=1.26.0"
 wrapt = ">=1.12.0"
 
 [package.extras]
-dev = ["pre-commit (>=2.7.1)", "bump2version"]
-docs = ["sphinx (>=3.3.0)", "sphinx-autodoc-annotation", "sphinx-autodoc-typehints (>=1.10.3)", "sphinx-paramlinks", "sphinx-toolbox", "sphinx-copybutton", "sphinx-last-updated-by-git", "sphinx-rtd-theme"]
+dev = ["bump2version", "pre-commit (>=2.7.1)"]
+docs = ["sphinx (>=3.3.0)", "sphinx-autodoc-annotation", "sphinx-autodoc-typehints (>=1.10.3)", "sphinx-copybutton", "sphinx-last-updated-by-git", "sphinx-paramlinks", "sphinx-rtd-theme", "sphinx-toolbox"]
 graph = ["networkx (>=4.3.0)"]
 tests = ["tox (>=3.20.1)"]
 
@@ -1427,7 +1437,7 @@ python-versions = ">=3.5"
 numpy = ">=1.7"
 
 [package.extras]
-docs = ["sphinx (==1.2.3)", "sphinxcontrib-napoleon", "sphinx-rtd-theme", "numpydoc"]
+docs = ["numpydoc", "sphinx (==1.2.3)", "sphinx-rtd-theme", "sphinxcontrib-napoleon"]
 tests = ["pytest", "pytest-cov", "pytest-pep8"]
 
 [[package]]
@@ -1455,7 +1465,7 @@ python-dateutil = ">=2.7.3"
 pytz = ">=2017.2"
 
 [package.extras]
-test = ["pytest (>=4.0.2)", "pytest-xdist", "hypothesis (>=3.58)"]
+test = ["hypothesis (>=3.58)", "pytest (>=4.0.2)", "pytest-xdist"]
 
 [[package]]
 name = "pandocfilters"
@@ -1490,7 +1500,7 @@ locket = "*"
 toolz = "*"
 
 [package.extras]
-complete = ["numpy (>=1.9.0)", "pandas (>=0.19.0)", "pyzmq", "blosc"]
+complete = ["blosc", "numpy (>=1.9.0)", "pandas (>=0.19.0)", "pyzmq"]
 
 [[package]]
 name = "pathspec"
@@ -1558,6 +1568,18 @@ category = "main"
 optional = false
 python-versions = ">=3.6"
 
+[[package]]
+name = "platformdirs"
+version = "2.6.0"
+description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+docs = ["furo (>=2022.9.29)", "proselint (>=0.13)", "sphinx (>=5.3)", "sphinx-autodoc-typehints (>=1.19.4)"]
+test = ["appdirs (==1.4.4)", "pytest (>=7.2)", "pytest-cov (>=4)", "pytest-mock (>=3.10)"]
+
 [[package]]
 name = "pluggy"
 version = "0.13.1"
@@ -1574,11 +1596,11 @@ dev = ["pre-commit", "tox"]
 
 [[package]]
 name = "pre-commit"
-version = "2.12.0"
+version = "2.21.0"
 description = "A framework for managing and maintaining multi-language pre-commit hooks."
 category = "dev"
 optional = false
-python-versions = ">=3.6.1"
+python-versions = ">=3.7"
 
 [package.dependencies]
 cfgv = ">=2.0.0"
@@ -1586,8 +1608,7 @@ identify = ">=1.0.0"
 importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
 nodeenv = ">=0.11.1"
 pyyaml = ">=5.1"
-toml = "*"
-virtualenv = ">=20.0.8"
+virtualenv = ">=20.10.0"
 
 [[package]]
 name = "pre-commit-hooks"
@@ -1861,15 +1882,16 @@ click = ">=4.0"
 click-plugins = "*"
 cligj = ">=0.5"
 numpy = "*"
+setuptools = "*"
 snuggs = ">=1.4.1"
 
 [package.extras]
-all = ["sphinx-rtd-theme", "boto3 (>=1.2.4)", "matplotlib", "pytest (>=2.8.2)", "numpydoc", "ghp-import", "ipython (>=2.0)", "hypothesis", "packaging", "sphinx", "pytest-cov (>=2.2.0)", "shapely"]
+all = ["boto3 (>=1.2.4)", "ghp-import", "hypothesis", "ipython (>=2.0)", "matplotlib", "numpydoc", "packaging", "pytest (>=2.8.2)", "pytest-cov (>=2.2.0)", "shapely", "sphinx", "sphinx-rtd-theme"]
 docs = ["ghp-import", "numpydoc", "sphinx", "sphinx-rtd-theme"]
 ipython = ["ipython (>=2.0)"]
 plot = ["matplotlib"]
 s3 = ["boto3 (>=1.2.4)"]
-test = ["boto3 (>=1.2.4)", "hypothesis", "packaging", "pytest-cov (>=2.2.0)", "pytest (>=2.8.2)", "shapely"]
+test = ["boto3 (>=1.2.4)", "hypothesis", "packaging", "pytest (>=2.8.2)", "pytest-cov (>=2.2.0)", "shapely"]
 
 [[package]]
 name = "regex"
@@ -1905,7 +1927,7 @@ idna = ">=2.5,<3"
 urllib3 = ">=1.21.1,<1.27"
 
 [package.extras]
-security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"]
+security = ["cryptography (>=1.3.4)", "pyOpenSSL (>=0.14)"]
 socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
 
 [[package]]
@@ -1998,6 +2020,7 @@ Click = ">=6.0"
 dparse = ">=0.5.1"
 packaging = "*"
 requests = "*"
+setuptools = "*"
 
 [[package]]
 name = "scanpy"
@@ -2033,17 +2056,17 @@ umap-learn = ">=0.3.10"
 
 [package.extras]
 bbknn = ["bbknn"]
-dev = ["setuptools-scm", "pytoml", "black (>=20.8b1)", "docutils"]
-doc = ["sphinx (>=3.2,<4.1.0)", "sphinx-rtd-theme (>=0.3.1)", "sphinx-autodoc-typehints", "scanpydoc (==0.7.2)", "typing-extensions", "python-igraph"]
+dev = ["black (>=20.8b1)", "docutils", "pytoml", "setuptools_scm"]
+doc = ["python-igraph", "scanpydoc (==0.7.2)", "sphinx (>=3.2,<4.1.0)", "sphinx-autodoc-typehints", "sphinx-rtd-theme (>=0.3.1)", "typing_extensions"]
 harmony = ["harmonypy"]
-leiden = ["python-igraph", "leidenalg"]
-louvain = ["python-igraph", "louvain (>=0.6,!=0.6.2)"]
+leiden = ["leidenalg", "python-igraph"]
+louvain = ["louvain (>=0.6,!=0.6.2)", "python-igraph"]
 magic = ["magic-impute (>=2.0)"]
-rapids = ["cudf (>=0.9)", "cuml (>=0.9)", "cugraph (>=0.9)"]
+rapids = ["cudf (>=0.9)", "cugraph (>=0.9)", "cuml (>=0.9)"]
 scanorama = ["scanorama"]
 scrublet = ["scrublet"]
 skmisc = ["scikit-misc (>=0.1.3)"]
-test = ["pytest (>=4.4)", "pytest-nunit", "dask[array] (!=2.17.0)", "fsspec", "zappy", "zarr", "profimp", "flit-core"]
+test = ["dask[array] (!=2.17.0)", "flit_core", "fsspec", "profimp", "pytest (>=4.4)", "pytest-nunit", "zappy", "zarr"]
 
 [[package]]
 name = "scikit-image"
@@ -2065,9 +2088,9 @@ tifffile = ">=2019.7.26"
 
 [package.extras]
 data = ["pooch (>=1.3.0)"]
-docs = ["sphinx (>=1.8,<=2.4.4)", "sphinx-gallery (>=0.7.0,!=0.8.0)", "numpydoc (>=1.0)", "sphinx-copybutton", "pytest-runner", "scikit-learn", "matplotlib (>=3.0.1)", "dask[array] (>=0.15.0,!=2.17.0)", "cloudpickle (>=0.2.1)", "pandas (>=0.23.0)", "seaborn (>=0.7.1)", "pooch (>=1.3.0)", "tifffile (>=2020.5.30)", "myst-parser", "ipywidgets", "plotly (>=4.10.0)"]
-optional = ["simpleitk", "astropy (>=3.1.2)", "qtpy", "pyamg", "dask[array] (>=1.0.0,!=2.17.0)", "cloudpickle (>=0.2.1)", "pooch (>=1.3.0)"]
-test = ["pytest (>=5.2.0)", "pytest-cov (>=2.7.0)", "pytest-localserver", "pytest-faulthandler", "flake8", "codecov", "pooch (>=1.3.0)"]
+docs = ["cloudpickle (>=0.2.1)", "dask[array] (>=0.15.0,!=2.17.0)", "ipywidgets", "matplotlib (>=3.0.1)", "myst-parser", "numpydoc (>=1.0)", "pandas (>=0.23.0)", "plotly (>=4.10.0)", "pooch (>=1.3.0)", "pytest-runner", "scikit-learn", "seaborn (>=0.7.1)", "sphinx (>=1.8,<=2.4.4)", "sphinx-copybutton", "sphinx-gallery (>=0.7.0,!=0.8.0)", "tifffile (>=2020.5.30)"]
+optional = ["SimpleITK", "astropy (>=3.1.2)", "cloudpickle (>=0.2.1)", "dask[array] (>=1.0.0,!=2.17.0)", "pooch (>=1.3.0)", "pyamg", "qtpy"]
+test = ["codecov", "flake8", "pooch (>=1.3.0)", "pytest (>=5.2.0)", "pytest-cov (>=2.7.0)", "pytest-faulthandler", "pytest-localserver"]
 
 [[package]]
 name = "scikit-learn"
@@ -2084,10 +2107,10 @@ scipy = ">=0.19.1"
 threadpoolctl = ">=2.0.0"
 
 [package.extras]
-benchmark = ["matplotlib (>=2.1.1)", "pandas (>=0.25.0)", "memory-profiler (>=0.57.0)"]
-docs = ["matplotlib (>=2.1.1)", "scikit-image (>=0.13)", "pandas (>=0.25.0)", "seaborn (>=0.9.0)", "memory-profiler (>=0.57.0)", "sphinx (>=3.2.0)", "sphinx-gallery (>=0.7.0)", "numpydoc (>=1.0.0)", "Pillow (>=7.1.2)", "sphinx-prompt (>=1.3.0)"]
-examples = ["matplotlib (>=2.1.1)", "scikit-image (>=0.13)", "pandas (>=0.25.0)", "seaborn (>=0.9.0)"]
-tests = ["matplotlib (>=2.1.1)", "scikit-image (>=0.13)", "pandas (>=0.25.0)", "pytest (>=5.0.1)", "pytest-cov (>=2.9.0)", "flake8 (>=3.8.2)", "mypy (>=0.770)", "pyamg (>=4.0.0)"]
+benchmark = ["matplotlib (>=2.1.1)", "memory-profiler (>=0.57.0)", "pandas (>=0.25.0)"]
+docs = ["Pillow (>=7.1.2)", "matplotlib (>=2.1.1)", "memory-profiler (>=0.57.0)", "numpydoc (>=1.0.0)", "pandas (>=0.25.0)", "scikit-image (>=0.13)", "seaborn (>=0.9.0)", "sphinx (>=3.2.0)", "sphinx-gallery (>=0.7.0)", "sphinx-prompt (>=1.3.0)"]
+examples = ["matplotlib (>=2.1.1)", "pandas (>=0.25.0)", "scikit-image (>=0.13)", "seaborn (>=0.9.0)"]
+tests = ["flake8 (>=3.8.2)", "matplotlib (>=2.1.1)", "mypy (>=0.770)", "pandas (>=0.25.0)", "pyamg (>=4.0.0)", "pytest (>=5.0.1)", "pytest-cov (>=2.9.0)", "scikit-image (>=0.13)"]
 
 [[package]]
 name = "scipy"
@@ -2122,6 +2145,19 @@ category = "main"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "setuptools"
+version = "65.6.3"
+description = "Easily download, build, install, upgrade, and uninstall Python packages"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-hoverxref (<2)", "sphinx-inline-tabs", "sphinx-notfound-page (==0.8.3)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
+testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8 (<5)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pip (>=19.1)", "pip-run (>=8.8)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
+testing-integration = ["build[virtualenv]", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"]
+
 [[package]]
 name = "sinfo"
 version = "0.3.4"
@@ -2170,7 +2206,7 @@ numpy = "*"
 pyparsing = ">=2.1.6"
 
 [package.extras]
-test = ["pytest", "hypothesis"]
+test = ["hypothesis", "pytest"]
 
 [[package]]
 name = "sparse"
@@ -2186,10 +2222,10 @@ numpy = ">=1.17"
 scipy = ">=0.19"
 
 [package.extras]
-all = ["dask", "pytest (>=3.5)", "pytest-black", "pytest-cov", "tox", "sphinx", "sphinx-rtd-theme"]
+all = ["dask[array]", "pytest (>=3.5)", "pytest-black", "pytest-cov", "sphinx", "sphinx-rtd-theme", "tox"]
 docs = ["sphinx", "sphinx-rtd-theme"]
-tests = ["dask", "pytest (>=3.5)", "pytest-black", "pytest-cov"]
-tox = ["dask", "pytest (>=3.5)", "pytest-black", "pytest-cov", "tox"]
+tests = ["dask[array]", "pytest (>=3.5)", "pytest-black", "pytest-cov"]
+tox = ["dask[array]", "pytest (>=3.5)", "pytest-black", "pytest-cov", "tox"]
 
 [[package]]
 name = "sphinx"
@@ -2209,6 +2245,7 @@ Jinja2 = ">=2.3"
 packaging = "*"
 Pygments = ">=2.0"
 requests = ">=2.5.0"
+setuptools = "*"
 snowballstemmer = ">=1.1"
 sphinxcontrib-applehelp = "*"
 sphinxcontrib-devhelp = "*"
@@ -2219,8 +2256,8 @@ sphinxcontrib-serializinghtml = "*"
 
 [package.extras]
 docs = ["sphinxcontrib-websupport"]
-lint = ["flake8 (>=3.5.0)", "isort", "mypy (>=0.800)", "docutils-stubs"]
-test = ["pytest", "pytest-cov", "html5lib", "cython", "typed-ast"]
+lint = ["docutils-stubs", "flake8 (>=3.5.0)", "isort", "mypy (>=0.800)"]
+test = ["cython", "html5lib", "pytest", "pytest-cov", "typed-ast"]
 
 [[package]]
 name = "sphinx-autobuild"
@@ -2264,7 +2301,7 @@ docutils = "<0.17"
 sphinx = "*"
 
 [package.extras]
-dev = ["transifex-client", "sphinxcontrib-httpdomain", "bump2version"]
+dev = ["bump2version", "sphinxcontrib-httpdomain", "transifex-client"]
 
 [[package]]
 name = "sphinxcontrib-applehelp"
@@ -2275,7 +2312,7 @@ optional = false
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
+lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
 [[package]]
@@ -2287,7 +2324,7 @@ optional = false
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
+lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
 [[package]]
@@ -2299,8 +2336,8 @@ optional = false
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
-test = ["pytest", "html5lib"]
+lint = ["docutils-stubs", "flake8", "mypy"]
+test = ["html5lib", "pytest"]
 
 [[package]]
 name = "sphinxcontrib-jsmath"
@@ -2311,7 +2348,7 @@ optional = false
 python-versions = ">=3.5"
 
 [package.extras]
-test = ["pytest", "flake8", "mypy"]
+test = ["flake8", "mypy", "pytest"]
 
 [[package]]
 name = "sphinxcontrib-qthelp"
@@ -2322,7 +2359,7 @@ optional = false
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
+lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
 [[package]]
@@ -2334,7 +2371,7 @@ optional = false
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
+lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
 [[package]]
@@ -2363,11 +2400,11 @@ xarray = ">=0.16.1"
 zarr = ">=2.6.1"
 
 [package.extras]
-all = ["PyQt5 (>=5.15.0)", "napari (>=0.4.2)", "esda (>=2.3.1)", "libpysal (>=4.3.0)", "astropy (>=4.1)"]
+all = ["PyQt5 (>=5.15.0)", "astropy (>=4.1)", "esda (>=2.3.1)", "libpysal (>=4.3.0)", "napari (>=0.4.2)"]
 dev = ["pre-commit (>=2.9.0)"]
 docs = ["nbsphinx (>=0.8.1)", "pyenchant (>=3.1.1)", "requests", "sphinx (>=3.3.0)", "sphinx-autodoc-annotation", "sphinx-autodoc-typehints (>=1.10.3)", "sphinx-gallery (>=0.8.2)", "sphinx-last-updated-by-git", "sphinx-rtd-theme", "sphinxcontrib-bibtex (>=2.1.0)", "sphinxcontrib-spelling"]
 interactive = ["PyQt5 (>=5.15.0)", "napari (>=0.4.2)"]
-test = ["tox (>=3.20.1)", "pytest-mock"]
+test = ["pytest-mock", "tox (>=3.20.1)"]
 
 [[package]]
 name = "statsmodels"
@@ -2386,7 +2423,7 @@ scipy = ">=1.1"
 [package.extras]
 build = ["cython (>=0.29)"]
 develop = ["cython (>=0.29)"]
-docs = ["sphinx", "nbconvert", "jupyter-client", "ipykernel", "matplotlib", "nbformat", "numpydoc", "pandas-datareader"]
+docs = ["ipykernel", "jupyter-client", "matplotlib", "nbconvert", "nbformat", "numpydoc", "pandas-datareader", "sphinx"]
 
 [[package]]
 name = "stdlib-list"
@@ -2440,9 +2477,11 @@ markdown = ">=2.6.8"
 numpy = ">=1.12.0"
 protobuf = ">=3.6.0"
 requests = ">=2.21.0,<3"
+setuptools = ">=41.0.0"
 tensorboard-data-server = ">=0.6.0,<0.7.0"
 tensorboard-plugin-wit = ">=1.6.0"
 werkzeug = ">=0.11.15"
+wheel = {version = ">=0.26", markers = "python_version >= \"3\""}
 
 [[package]]
 name = "tensorboard-data-server"
@@ -2486,6 +2525,7 @@ tensorboard = ">=2.5,<3.0"
 tensorflow-estimator = ">=2.5.0rc0,<2.6.0"
 termcolor = ">=1.1.0,<1.2.0"
 typing-extensions = ">=3.7.4,<3.8.0"
+wheel = ">=0.35,<1.0"
 wrapt = ">=1.12.1,<1.13.0"
 
 [[package]]
@@ -2529,7 +2569,7 @@ optional = false
 python-versions = ">= 3.5"
 
 [package.extras]
-test = ["pytest", "pathlib2"]
+test = ["pathlib2", "pytest"]
 
 [[package]]
 name = "texttable"
@@ -2559,7 +2599,7 @@ python-versions = ">=3.7"
 numpy = ">=1.15.1"
 
 [package.extras]
-all = ["imagecodecs (>=2021.4.28)", "matplotlib (>=3.2)", "lxml"]
+all = ["imagecodecs (>=2021.4.28)", "lxml", "matplotlib (>=3.2)"]
 
 [[package]]
 name = "toml"
@@ -2629,8 +2669,8 @@ optional = false
 python-versions = ">=3.5.3"
 
 [package.extras]
-doc = ["sphinx-rtd-theme", "sphinx-autodoc-typehints (>=1.2.0)"]
-test = ["pytest", "typing-extensions", "mypy"]
+doc = ["sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"]
+test = ["mypy", "pytest", "typing-extensions"]
 
 [[package]]
 name = "typing-extensions"
@@ -2656,8 +2696,8 @@ scikit-learn = ">=0.22"
 scipy = ">=1.0"
 
 [package.extras]
-parametric_umap = ["tensorflow (>=2.1)"]
-plot = ["pandas", "matplotlib", "datashader", "bokeh", "holoviews", "colorcet", "seaborn", "scikit-image"]
+parametric-umap = ["tensorflow (>=2.1)"]
+plot = ["bokeh", "colorcet", "datashader", "holoviews", "matplotlib", "pandas", "scikit-image", "seaborn"]
 
 [[package]]
 name = "urllib3"
@@ -2668,28 +2708,27 @@ optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
 
 [package.extras]
-secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"]
-socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 brotli = ["brotlipy (>=0.6.0)"]
+secure = ["certifi", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "ipaddress", "pyOpenSSL (>=0.14)"]
+socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
 [[package]]
 name = "virtualenv"
-version = "20.4.3"
+version = "20.17.1"
 description = "Virtual Python Environment builder"
 category = "dev"
 optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
+python-versions = ">=3.6"
 
 [package.dependencies]
-appdirs = ">=1.4.3,<2"
-distlib = ">=0.3.1,<1"
-filelock = ">=3.0.0,<4"
-importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""}
-six = ">=1.9.0,<2"
+distlib = ">=0.3.6,<1"
+filelock = ">=3.4.1,<4"
+importlib-metadata = {version = ">=4.8.3", markers = "python_version < \"3.8\""}
+platformdirs = ">=2.4,<3"
 
 [package.extras]
-docs = ["proselint (>=0.10.2)", "sphinx (>=3)", "sphinx-argparse (>=0.2.5)", "sphinx-rtd-theme (>=0.4.3)", "towncrier (>=19.9.0rc1)"]
-testing = ["coverage (>=4)", "coverage-enable-subprocess (>=1)", "flaky (>=3)", "pytest (>=4)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.1)", "pytest-mock (>=2)", "pytest-randomly (>=1)", "pytest-timeout (>=1)", "packaging (>=20.0)", "xonsh (>=0.9.16)"]
+docs = ["proselint (>=0.13)", "sphinx (>=5.3)", "sphinx-argparse (>=0.3.2)", "sphinx-rtd-theme (>=1)", "towncrier (>=22.8)"]
+testing = ["coverage (>=6.2)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=21.3)", "pytest (>=7.0.1)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.2)", "pytest-mock (>=3.6.1)", "pytest-randomly (>=3.10.3)", "pytest-timeout (>=2.1)"]
 
 [[package]]
 name = "wcwidth"
@@ -2718,6 +2757,17 @@ python-versions = ">=3.6"
 [package.extras]
 watchdog = ["watchdog"]
 
+[[package]]
+name = "wheel"
+version = "0.38.4"
+description = "A built-package format for Python"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+test = ["pytest (>=3.0.0)"]
+
 [[package]]
 name = "widgetsnbextension"
 version = "3.5.1"
@@ -2748,14 +2798,15 @@ python-versions = ">=3.7"
 [package.dependencies]
 numpy = ">=1.17"
 pandas = ">=1.0"
+setuptools = ">=40.4"
 
 [package.extras]
-accel = ["scipy", "bottleneck", "numbagg"]
-complete = ["netcdf4", "h5netcdf", "scipy", "pydap", "zarr", "fsspec", "cftime", "rasterio", "cfgrib", "pooch", "bottleneck", "numbagg", "dask", "matplotlib", "seaborn", "nc-time-axis"]
-docs = ["netcdf4", "h5netcdf", "scipy", "pydap", "zarr", "fsspec", "cftime", "rasterio", "cfgrib", "pooch", "bottleneck", "numbagg", "dask", "matplotlib", "seaborn", "nc-time-axis", "sphinx-autosummary-accessors", "sphinx-rtd-theme", "ipython", "ipykernel", "jupyter-client", "nbsphinx", "scanpydoc"]
-io = ["netcdf4", "h5netcdf", "scipy", "pydap", "zarr", "fsspec", "cftime", "rasterio", "cfgrib", "pooch"]
-parallel = ["dask"]
-viz = ["matplotlib", "seaborn", "nc-time-axis"]
+accel = ["bottleneck", "numbagg", "scipy"]
+complete = ["bottleneck", "cfgrib", "cftime", "dask[complete]", "fsspec", "h5netcdf", "matplotlib", "nc-time-axis", "netCDF4", "numbagg", "pooch", "pydap", "rasterio", "scipy", "seaborn", "zarr"]
+docs = ["bottleneck", "cfgrib", "cftime", "dask[complete]", "fsspec", "h5netcdf", "ipykernel", "ipython", "jupyter-client", "matplotlib", "nbsphinx", "nc-time-axis", "netCDF4", "numbagg", "pooch", "pydap", "rasterio", "scanpydoc", "scipy", "seaborn", "sphinx-autosummary-accessors", "sphinx-rtd-theme", "zarr"]
+io = ["cfgrib", "cftime", "fsspec", "h5netcdf", "netCDF4", "pooch", "pydap", "rasterio", "scipy", "zarr"]
+parallel = ["dask[complete]"]
+viz = ["matplotlib", "nc-time-axis", "seaborn"]
 
 [[package]]
 name = "xdoctest"
@@ -2771,11 +2822,11 @@ Pygments = {version = "*", optional = true, markers = "extra == \"colors\""}
 six = "*"
 
 [package.extras]
-all = ["six", "codecov", "scikit-build", "cmake", "ninja", "pybind11", "pygments", "colorama", "pytest", "pytest", "pytest-cov", "pytest", "pytest", "pytest-cov", "typing", "nbformat", "nbconvert", "jupyter-client", "ipython", "ipykernel", "pytest", "pytest-cov"]
-colors = ["pygments", "colorama"]
-jupyter = ["nbformat", "nbconvert", "jupyter-client", "ipython", "ipykernel"]
-optional = ["pygments", "colorama", "nbformat", "nbconvert", "jupyter-client", "ipython", "ipykernel"]
-tests = ["codecov", "scikit-build", "cmake", "ninja", "pybind11", "pytest", "pytest", "pytest-cov", "pytest", "pytest", "pytest-cov", "typing", "nbformat", "nbconvert", "jupyter-client", "ipython", "ipykernel", "pytest", "pytest-cov"]
+all = ["IPython", "Pygments", "cmake", "codecov", "colorama", "ipykernel", "jupyter-client", "nbconvert", "nbformat", "ninja", "pybind11", "pytest", "pytest", "pytest", "pytest", "pytest", "pytest-cov", "pytest-cov", "pytest-cov", "scikit-build", "six", "typing"]
+colors = ["Pygments", "colorama"]
+jupyter = ["IPython", "ipykernel", "jupyter-client", "nbconvert", "nbformat"]
+optional = ["IPython", "Pygments", "colorama", "ipykernel", "jupyter-client", "nbconvert", "nbformat"]
+tests = ["IPython", "cmake", "codecov", "ipykernel", "jupyter-client", "nbconvert", "nbformat", "ninja", "pybind11", "pytest", "pytest", "pytest", "pytest", "pytest", "pytest-cov", "pytest-cov", "pytest-cov", "scikit-build", "typing"]
 
 [[package]]
 name = "xlrd"
@@ -2800,7 +2851,7 @@ numcodecs = ">=0.6.4"
 numpy = ">=1.7"
 
 [package.extras]
-jupyter = ["notebook", "ipytree"]
+jupyter = ["ipytree", "notebook"]
 
 [[package]]
 name = "zipp"
@@ -2811,13 +2862,13 @@ optional = false
 python-versions = ">=3.6"
 
 [package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=1.2.3)", "pytest-flake8", "pytest-cov", "pytest-enabler", "jaraco.itertools", "func-timeout", "pytest-black (>=0.3.7)", "pytest-mypy"]
+docs = ["jaraco.packaging (>=8.2)", "rst.linker (>=1.9)", "sphinx"]
+testing = ["func-timeout", "jaraco.itertools", "pytest (>=4.6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=1.2.3)", "pytest-cov", "pytest-enabler", "pytest-flake8", "pytest-mypy"]
 
 [metadata]
 lock-version = "1.1"
 python-versions = ">=3.7,<3.9"
-content-hash = "24674f2aff1f2a9fe7c40453fd4cceda67116b21aee7d3aac1f46e4588d4a4a3"
+content-hash = "f05fdd2a4e3c23cab6327ce74480120921bbaf9d70293356d75b9c79e541b339"
 
 [metadata.files]
 absl-py = [
@@ -3088,8 +3139,8 @@ diffxpy = [
     {file = "diffxpy-0.7.4.tar.gz", hash = "sha256:68c793cdd3e8854d2272ae74451bacc5a1b8fd6b020f08f21dbb310d6fa2bf85"},
 ]
 distlib = [
-    {file = "distlib-0.3.1-py2.py3-none-any.whl", hash = "sha256:8c09de2c67b3e7deef7184574fc060ab8a793e7adbb183d942c389c8b13c52fb"},
-    {file = "distlib-0.3.1.zip", hash = "sha256:edf6116872c863e1aa9d5bb7cb5e05a022c519a4594dc703843343a9ddd9bff1"},
+    {file = "distlib-0.3.6-py2.py3-none-any.whl", hash = "sha256:f35c4b692542ca110de7ef0bea44d73981caeb34ca0b9b6b2e6d7790dda8f80e"},
+    {file = "distlib-0.3.6.tar.gz", hash = "sha256:14bad2d9b04d3a36127ac97f30b12a19268f211063d8f8ee4f47108896e11b46"},
 ]
 docrep = [
     {file = "docrep-0.3.2.tar.gz", hash = "sha256:ed8a17e201abd829ef8da78a0b6f4d51fb99a4cbd0554adbed3309297f964314"},
@@ -3115,8 +3166,8 @@ fasteners = [
     {file = "fasteners-0.16.2.tar.gz", hash = "sha256:2fa2ca17a4fa0510ff63e0a091ab58fdd1bcdbab82e08d4e449b85ff086fa68e"},
 ]
 filelock = [
-    {file = "filelock-3.0.12-py3-none-any.whl", hash = "sha256:929b7d63ec5b7d6b71b0fa5ac14e030b3f70b75747cef1b10da9b879fef15836"},
-    {file = "filelock-3.0.12.tar.gz", hash = "sha256:18d82244ee114f543149c66a6e0c14e9c4f8a1044b5cdaadd0f82159d6a6ff59"},
+    {file = "filelock-3.8.2-py3-none-any.whl", hash = "sha256:8df285554452285f79c035efb0c861eb33a4bcfa5b7a137016e32e6a90f9792c"},
+    {file = "filelock-3.8.2.tar.gz", hash = "sha256:7565f628ea56bfcd8e54e42bdc55da899c85c1abfe1b5bcfd147e9188cebb3b2"},
 ]
 flake8 = [
     {file = "flake8-3.9.2-py2.py3-none-any.whl", hash = "sha256:bf8fd333346d844f616e8d47905ef3a3384edae6b4e9beb0c5101e25e3110907"},
@@ -3254,8 +3305,8 @@ imagesize = [
     {file = "imagesize-1.2.0.tar.gz", hash = "sha256:b1f6b5a4eab1f73479a50fb79fcf729514a900c341d8503d62a62dbc4127a2b1"},
 ]
 importlib-metadata = [
-    {file = "importlib_metadata-3.10.0-py3-none-any.whl", hash = "sha256:d2d46ef77ffc85cbf7dac7e81dd663fde71c45326131bea8033b9bad42268ebe"},
-    {file = "importlib_metadata-3.10.0.tar.gz", hash = "sha256:c9db46394197244adf2f0b08ec5bc3cf16757e9590b02af1fca085c16c0d600a"},
+    {file = "importlib_metadata-5.2.0-py3-none-any.whl", hash = "sha256:0eafa39ba42bf225fc00e67f701d71f85aead9f878569caf13c3724f704b970f"},
+    {file = "importlib_metadata-5.2.0.tar.gz", hash = "sha256:404d48d62bba0b7a77ff9d405efd91501bef2e67ff4ace0bed40a0cf28c3c7cd"},
 ]
 inflect = [
     {file = "inflect-5.3.0-py3-none-any.whl", hash = "sha256:42560be16af702a21d43d59427f276b5aed79efb1ded9b713468c081f4353d10"},
@@ -3389,6 +3440,7 @@ leidenalg = [
     {file = "leidenalg-0.8.4.tar.gz", hash = "sha256:45764e0fc8829d23dee7698bd91d07c2027423d6309bd66b9711cdfecbcf8459"},
 ]
 livereload = [
+    {file = "livereload-2.6.3-py2.py3-none-any.whl", hash = "sha256:ad4ac6f53b2d62bb6ce1a5e6e96f1f00976a32348afedcb4b6d68df2a1d346e4"},
     {file = "livereload-2.6.3.tar.gz", hash = "sha256:776f2f865e59fde56490a56bcc6773b6917366bce0c267c60ee8aaf1a0959869"},
 ]
 llvmlite = [
@@ -3842,13 +3894,17 @@ pillow = [
     {file = "Pillow-8.2.0-pp37-pypy37_pp73-win_amd64.whl", hash = "sha256:8b56553c0345ad6dcb2e9b433ae47d67f95fc23fe28a0bde15a120f25257e291"},
     {file = "Pillow-8.2.0.tar.gz", hash = "sha256:a787ab10d7bb5494e5f76536ac460741788f1fbce851068d73a87ca7c35fc3e1"},
 ]
+platformdirs = [
+    {file = "platformdirs-2.6.0-py3-none-any.whl", hash = "sha256:1a89a12377800c81983db6be069ec068eee989748799b946cce2a6e80dcc54ca"},
+    {file = "platformdirs-2.6.0.tar.gz", hash = "sha256:b46ffafa316e6b83b47489d240ce17173f123a9b9c83282141c3daf26ad9ac2e"},
+]
 pluggy = [
     {file = "pluggy-0.13.1-py2.py3-none-any.whl", hash = "sha256:966c145cd83c96502c3c3868f50408687b38434af77734af1e9ca461a4081d2d"},
     {file = "pluggy-0.13.1.tar.gz", hash = "sha256:15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0"},
 ]
 pre-commit = [
-    {file = "pre_commit-2.12.0-py2.py3-none-any.whl", hash = "sha256:029d53cb83c241fe7d66eeee1e24db426f42c858f15a38d20bcefd8d8e05c9da"},
-    {file = "pre_commit-2.12.0.tar.gz", hash = "sha256:46b6ffbab37986c47d0a35e40906ae029376deed89a0eb2e446fb6e67b220427"},
+    {file = "pre_commit-2.21.0-py2.py3-none-any.whl", hash = "sha256:e2f91727039fc39a92f58a588a25b87f936de6567eed4f0e673e0507edc75bad"},
+    {file = "pre_commit-2.21.0.tar.gz", hash = "sha256:31ef31af7e474a8d8995027fefdfcf509b5c913ff31f2015b4ec4beb26a6f658"},
 ]
 pre-commit-hooks = [
     {file = "pre_commit_hooks-3.4.0-py2.py3-none-any.whl", hash = "sha256:b1d329fc712f53f56af7c4a0ac08c414a7fcfd634dbd829c3a03f39cfb9c3574"},
@@ -3900,34 +3956,12 @@ py = [
     {file = "py-1.10.0.tar.gz", hash = "sha256:21b81bda15b66ef5e1a777a21c4dcd9c20ad3efd0b3f817e7a809035269e1bd3"},
 ]
 pyasn1 = [
-    {file = "pyasn1-0.4.8-py2.4.egg", hash = "sha256:fec3e9d8e36808a28efb59b489e4528c10ad0f480e57dcc32b4de5c9d8c9fdf3"},
-    {file = "pyasn1-0.4.8-py2.5.egg", hash = "sha256:0458773cfe65b153891ac249bcf1b5f8f320b7c2ce462151f8fa74de8934becf"},
-    {file = "pyasn1-0.4.8-py2.6.egg", hash = "sha256:5c9414dcfede6e441f7e8f81b43b34e834731003427e5b09e4e00e3172a10f00"},
-    {file = "pyasn1-0.4.8-py2.7.egg", hash = "sha256:6e7545f1a61025a4e58bb336952c5061697da694db1cae97b116e9c46abcf7c8"},
     {file = "pyasn1-0.4.8-py2.py3-none-any.whl", hash = "sha256:39c7e2ec30515947ff4e87fb6f456dfc6e84857d34be479c9d4a4ba4bf46aa5d"},
-    {file = "pyasn1-0.4.8-py3.1.egg", hash = "sha256:78fa6da68ed2727915c4767bb386ab32cdba863caa7dbe473eaae45f9959da86"},
-    {file = "pyasn1-0.4.8-py3.2.egg", hash = "sha256:08c3c53b75eaa48d71cf8c710312316392ed40899cb34710d092e96745a358b7"},
-    {file = "pyasn1-0.4.8-py3.3.egg", hash = "sha256:03840c999ba71680a131cfaee6fab142e1ed9bbd9c693e285cc6aca0d555e576"},
-    {file = "pyasn1-0.4.8-py3.4.egg", hash = "sha256:7ab8a544af125fb704feadb008c99a88805126fb525280b2270bb25cc1d78a12"},
-    {file = "pyasn1-0.4.8-py3.5.egg", hash = "sha256:e89bf84b5437b532b0803ba5c9a5e054d21fec423a89952a74f87fa2c9b7bce2"},
-    {file = "pyasn1-0.4.8-py3.6.egg", hash = "sha256:014c0e9976956a08139dc0712ae195324a75e142284d5f87f1a87ee1b068a359"},
-    {file = "pyasn1-0.4.8-py3.7.egg", hash = "sha256:99fcc3c8d804d1bc6d9a099921e39d827026409a58f2a720dcdb89374ea0c776"},
     {file = "pyasn1-0.4.8.tar.gz", hash = "sha256:aef77c9fb94a3ac588e87841208bdec464471d9871bd5050a287cc9a475cd0ba"},
 ]
 pyasn1-modules = [
     {file = "pyasn1-modules-0.2.8.tar.gz", hash = "sha256:905f84c712230b2c592c19470d3ca8d552de726050d1d1716282a1f6146be65e"},
-    {file = "pyasn1_modules-0.2.8-py2.4.egg", hash = "sha256:0fe1b68d1e486a1ed5473f1302bd991c1611d319bba158e98b106ff86e1d7199"},
-    {file = "pyasn1_modules-0.2.8-py2.5.egg", hash = "sha256:fe0644d9ab041506b62782e92b06b8c68cca799e1a9636ec398675459e031405"},
-    {file = "pyasn1_modules-0.2.8-py2.6.egg", hash = "sha256:a99324196732f53093a84c4369c996713eb8c89d360a496b599fb1a9c47fc3eb"},
-    {file = "pyasn1_modules-0.2.8-py2.7.egg", hash = "sha256:0845a5582f6a02bb3e1bde9ecfc4bfcae6ec3210dd270522fee602365430c3f8"},
     {file = "pyasn1_modules-0.2.8-py2.py3-none-any.whl", hash = "sha256:a50b808ffeb97cb3601dd25981f6b016cbb3d31fbf57a8b8a87428e6158d0c74"},
-    {file = "pyasn1_modules-0.2.8-py3.1.egg", hash = "sha256:f39edd8c4ecaa4556e989147ebf219227e2cd2e8a43c7e7fcb1f1c18c5fd6a3d"},
-    {file = "pyasn1_modules-0.2.8-py3.2.egg", hash = "sha256:b80486a6c77252ea3a3e9b1e360bc9cf28eaac41263d173c032581ad2f20fe45"},
-    {file = "pyasn1_modules-0.2.8-py3.3.egg", hash = "sha256:65cebbaffc913f4fe9e4808735c95ea22d7a7775646ab690518c056784bc21b4"},
-    {file = "pyasn1_modules-0.2.8-py3.4.egg", hash = "sha256:15b7c67fabc7fc240d87fb9aabf999cf82311a6d6fb2c70d00d3d0604878c811"},
-    {file = "pyasn1_modules-0.2.8-py3.5.egg", hash = "sha256:426edb7a5e8879f1ec54a1864f16b882c2837bfd06eee62f2c982315ee2473ed"},
-    {file = "pyasn1_modules-0.2.8-py3.6.egg", hash = "sha256:cbac4bc38d117f2a49aeedec4407d23e8866ea4ac27ff2cf7fb3e5b570df19e0"},
-    {file = "pyasn1_modules-0.2.8-py3.7.egg", hash = "sha256:c29a5e5cc7a3f05926aff34e097e84f8589cd790ce0ed41b67aed6857b26aafd"},
 ]
 pycodestyle = [
     {file = "pycodestyle-2.7.0-py2.py3-none-any.whl", hash = "sha256:514f76d918fcc0b55c6680472f0a37970994e07bbb80725808c17089be302068"},
@@ -4182,7 +4216,6 @@ requests = [
 requests-oauthlib = [
     {file = "requests-oauthlib-1.3.0.tar.gz", hash = "sha256:b4261601a71fd721a8bd6d7aa1cc1d6a8a93b4a9f5e96626f8e4d91e8beeaa6a"},
     {file = "requests_oauthlib-1.3.0-py2.py3-none-any.whl", hash = "sha256:7f71572defaecd16372f9006f33c2ec8c077c3cfa6f5911a9a90202beb513f3d"},
-    {file = "requests_oauthlib-1.3.0-py3.7.egg", hash = "sha256:fa6c47b933f01060936d87ae9327fead68768b69c6c9ea2109c48be30f2d4dbc"},
 ]
 restructuredtext-lint = [
     {file = "restructuredtext_lint-1.3.2.tar.gz", hash = "sha256:d3b10a1fe2ecac537e51ae6d151b223b78de9fafdd50e5eb6b08c243df173c80"},
@@ -4332,6 +4365,10 @@ send2trash = [
     {file = "Send2Trash-1.5.0-py3-none-any.whl", hash = "sha256:f1691922577b6fa12821234aeb57599d887c4900b9ca537948d2dac34aea888b"},
     {file = "Send2Trash-1.5.0.tar.gz", hash = "sha256:60001cc07d707fe247c94f74ca6ac0d3255aabcb930529690897ca2a39db28b2"},
 ]
+setuptools = [
+    {file = "setuptools-65.6.3-py3-none-any.whl", hash = "sha256:57f6f22bde4e042978bcd50176fdb381d7c21a9efa4041202288d3737a0c6a54"},
+    {file = "setuptools-65.6.3.tar.gz", hash = "sha256:a7620757bf984b58deaf32fc8a4577a9bbc0850cf92c20e1ce41c38c19e5fb75"},
+]
 sinfo = [
     {file = "sinfo-0.3.4.tar.gz", hash = "sha256:81ea91c69a875de178e10bada9476d7300a1f712e1823dbd7714f43a10baba4d"},
 ]
@@ -4615,8 +4652,8 @@ urllib3 = [
     {file = "urllib3-1.26.4.tar.gz", hash = "sha256:e7b021f7241115872f92f43c6508082facffbd1c048e3c6e2bb9c2a157e28937"},
 ]
 virtualenv = [
-    {file = "virtualenv-20.4.3-py2.py3-none-any.whl", hash = "sha256:83f95875d382c7abafe06bd2a4cdd1b363e1bb77e02f155ebe8ac082a916b37c"},
-    {file = "virtualenv-20.4.3.tar.gz", hash = "sha256:49ec4eb4c224c6f7dd81bb6d0a28a09ecae5894f4e593c89b0db0885f565a107"},
+    {file = "virtualenv-20.17.1-py3-none-any.whl", hash = "sha256:ce3b1684d6e1a20a3e5ed36795a97dfc6af29bc3970ca8dab93e11ac6094b3c4"},
+    {file = "virtualenv-20.17.1.tar.gz", hash = "sha256:f8b927684efc6f1cc206c9db297a570ab9ad0e51c16fa9e45487d36d1905c058"},
 ]
 wcwidth = [
     {file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},
@@ -4630,6 +4667,10 @@ werkzeug = [
     {file = "Werkzeug-2.0.1-py3-none-any.whl", hash = "sha256:6c1ec500dcdba0baa27600f6a22f6333d8b662d22027ff9f6202e3367413caa8"},
     {file = "Werkzeug-2.0.1.tar.gz", hash = "sha256:1de1db30d010ff1af14a009224ec49ab2329ad2cde454c8a708130642d579c42"},
 ]
+wheel = [
+    {file = "wheel-0.38.4-py3-none-any.whl", hash = "sha256:b60533f3f5d530e971d6737ca6d58681ee434818fab630c83a734bb10c083ce8"},
+    {file = "wheel-0.38.4.tar.gz", hash = "sha256:965f5259b566725405b05e7cf774052044b1ed30119b5d586b2703aafe8719ac"},
+]
 widgetsnbextension = [
     {file = "widgetsnbextension-3.5.1-py2.py3-none-any.whl", hash = "sha256:bd314f8ceb488571a5ffea6cc5b9fc6cba0adaf88a9d2386b93a489751938bcd"},
     {file = "widgetsnbextension-3.5.1.tar.gz", hash = "sha256:079f87d87270bce047512400efd70238820751a11d2d8cb137a5a5bdbaf255c7"},
diff --git a/pyproject.toml b/pyproject.toml
index 129be401..9ea571b1 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -43,7 +43,7 @@ typeguard = "^2.12.0"
 xdoctest = {extras = ["colors"], version = "^0.15.0"}
 sphinx = "^3.5.4"
 sphinx-autobuild = "^2021.3.14"
-pre-commit = "^2.11.1"
+pre-commit = "^2.21.0"
 flake8 = "^3.9.2"
 black = "^20.8b1"
 flake8-bandit = "^2.1.2"