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LOOCV option for DAPC #365

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carlaperezmon opened this issue Oct 21, 2024 · 1 comment
Open

LOOCV option for DAPC #365

carlaperezmon opened this issue Oct 21, 2024 · 1 comment

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@carlaperezmon
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Is there any function in the package for DAPC (or other adegenet analyses) that enables to perform leave one out cross validations in the model?

I am analysing a small dataset using DAPC in a proof of concept study and since I do not have many replicates per group (<10 replicates per group) I would like to cross validate the model using LOOCV method.
@zkamvar
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zkamvar commented Oct 21, 2024

I believe what you are describing is implemented in xvalDapc: https://rdrr.io/cran/adegenet/man/xvalDapc.html

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@zkamvar @carlaperezmon