DESCRIPTION

Package: treescape
Title: Statistical Exploration of Landscapes of Phylogenetic Trees
Version: 1.10.19
Date: 2017-02-08
Authors@R: c(TJ=person("Thibaut", "Jombart", email="thibaut.jombart@gmail.com", role = c("aut")),
 	     MK=person("Michelle", "Kendall", email="m.kendall@imperial.ac.uk", role = c("aut", "cre")),
	     JAG=person("Jacob", "Almagro-Garcia", role = c("aut")),
	     CC=person("Caroline", "Colijn", role = c("aut")))
Maintainer: Michelle Kendall <m.kendall@imperial.ac.uk>
Description: Tools for the exploration of distributions of phylogenetic trees.
    This package includes a shiny interface which can be started from R using
    'treescapeServer()'.
Depends:
    R (>= 3.1.2),
    ape,
    ade4
Imports:
    adegenet,
    adegraphics,
    adephylo,
    combinat,
    compiler,
    distory,
    fields,
    htmlwidgets,
    MASS,
    phangorn,
    Rcpp,
    RLumShiny,
    scatterD3,
    shiny,
    shinyBS,
    utils
LinkingTo: Rcpp
Suggests:
    igraph,
    RColorBrewer,
    ggplot2,
    testthat, 
    knitr,
    rmarkdown,
    rgl
License: GPL (>=2)
LazyData: true
Collate:
    RcppExports.R
    metrics.R
    medTree.R
    treescape.R
    findGroves.R
    plotGroves.R
    plotTreeDiff.R
    servers.R
    transmissionTrees.R
    data.R
RoxygenNote: 6.0.0
VignetteBuilder: knitr