diff --git a/config/taxon_list.csv b/config/taxon_list.csv index fbb8eab92..07edcb9d1 100644 --- a/config/taxon_list.csv +++ b/config/taxon_list.csv @@ -7865,7 +7865,7 @@ Canna x orchiodes,Canna x orchiodes,species,accepted,APC,,Canna,Cannaceae,Canna Cannabis sativa,Cannabis sativa,species,accepted,APC,,Cannabis,Cannabaceae,Cannabis sativa,,"WA (naturalised), NT (naturalised), SA (naturalised), Qld (naturalised), NSW (naturalised), Vic (naturalised)",naturalised,Cannabis sativa L.,https://id.biodiversity.org.au/node/apni/2900671,https://id.biodiversity.org.au/node/apni/2908697,https://id.biodiversity.org.au/taxon/apni/51269919,https://id.biodiversity.org.au/name/apni/106887,https://id.biodiversity.org.au/node/apni/2900671,accepted Canscora diffusa,Canscora diffusa,species,accepted,APC,,Canscora,Gentianaceae,Canscora diffusa,,"WA, NT, Qld",native,Canscora diffusa (Vahl) R.Br. ex Roem. & Schult.,https://id.biodiversity.org.au/node/apni/2918033,https://id.biodiversity.org.au/taxon/apni/51436870,https://id.biodiversity.org.au/taxon/apni/51436871,https://id.biodiversity.org.au/name/apni/106949,https://id.biodiversity.org.au/node/apni/2918033,accepted Cansjera leptostachya,Cansjera leptostachya,species,accepted,APC,,Cansjera,Opiliaceae,Cansjera leptostachya,,"WA, NT, Qld",native,Cansjera leptostachya Benth.,https://id.biodiversity.org.au/node/apni/2903545,https://id.biodiversity.org.au/node/apni/2892356,https://id.biodiversity.org.au/node/apni/2902260,https://id.biodiversity.org.au/name/apni/106971,https://id.biodiversity.org.au/node/apni/2903545,accepted -Canthium sp. [Canthium NA; Cooper_2013],Canthium sp. [Canthium NA; Cooper_2013],genus,genus unplaced by APC,APNI,,Canthium,Rubiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51446612,,, +Canthium sp. [Canthium NA; Cooper_2013],Canthium sp. [Canthium NA; Cooper_2013],genus,unknown,APNI,,Canthium,Rubiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51446612,,, Cantinoa americana,Cantinoa americana,species,accepted,APC,,Cantinoa,Lamiaceae,Cantinoa americana,,NT (naturalised),naturalised,Cantinoa americana (Aubl.) Harley & J.F.B.Pastore,https://id.biodiversity.org.au/node/apni/7466713,https://id.biodiversity.org.au/node/apni/7466712,https://id.biodiversity.org.au/taxon/apni/51696573,https://id.biodiversity.org.au/name/apni/248041,https://id.biodiversity.org.au/node/apni/7466713,accepted Capillipedium parviflorum,Capillipedium parviflorum,species,accepted,APC,,Capillipedium,Poaceae,Capillipedium parviflorum,,"WA, NT, Qld, NSW",native,Capillipedium parviflorum (R.Br.) Stapf,https://id.biodiversity.org.au/node/apni/2891641,https://id.biodiversity.org.au/taxon/apni/51291224,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/107256,https://id.biodiversity.org.au/node/apni/2891641,accepted Capillipedium spicigerum,Capillipedium spicigerum,species,accepted,APC,,Capillipedium,Poaceae,Capillipedium spicigerum,,"NT, Qld, NSW",native,Capillipedium spicigerum S.T.Blake,https://id.biodiversity.org.au/taxon/apni/51291223,https://id.biodiversity.org.au/taxon/apni/51291224,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/107301,https://id.biodiversity.org.au/taxon/apni/51291223,accepted @@ -8328,7 +8328,7 @@ Cayratia sp. [Schmidt_2003],Cayratia sp. [Schmidt_2003],genus,genus accepted,APC Ceanothus thyrsiflorus,Ceanothus thyrsiflorus,species,accepted,APC,,Ceanothus,Rhamnaceae,Ceanothus thyrsiflorus,,SA (doubtfully naturalised),naturalised,Ceanothus thyrsiflorus Eschsch.,https://id.biodiversity.org.au/node/apni/2916348,https://id.biodiversity.org.au/node/apni/2919380,https://id.biodiversity.org.au/taxon/apni/51446206,https://id.biodiversity.org.au/name/apni/133199,https://id.biodiversity.org.au/node/apni/2916348,accepted Cecarria obtusifolia,Cecarria obtusifolia,species,accepted,APC,,Cecarria,Loranthaceae,Cecarria obtusifolia,,Qld,native,Cecarria obtusifolia (Merr.) Barlow,https://id.biodiversity.org.au/node/apni/2912676,https://id.biodiversity.org.au/node/apni/2902277,https://id.biodiversity.org.au/taxon/apni/51438796,https://id.biodiversity.org.au/name/apni/57626,https://id.biodiversity.org.au/node/apni/2912676,accepted Cecropia peltata,Cecropia peltata,species,accepted,APC,,Cecropia,Urticaceae,Cecropia peltata,,Qld (doubtfully naturalised),naturalised,Cecropia peltata L.,https://id.biodiversity.org.au/node/apni/2901775,https://id.biodiversity.org.au/node/apni/2888668,https://id.biodiversity.org.au/taxon/apni/51662052,https://id.biodiversity.org.au/name/apni/218055,https://id.biodiversity.org.au/node/apni/2901775,accepted -Cedrela sp. [Cedrela aclerata; Stewart_1995],Cedrela sp. [Cedrela aclerata; Stewart_1995],genus,genus unplaced by APC,APNI,,Cedrela,Meliaceae,,,,,,,,https://id.biodiversity.org.au/node/apni/9261145,,, +Cedrela sp. [Cedrela aclerata; Stewart_1995],Cedrela sp. [Cedrela aclerata; Stewart_1995],genus,unknown,APNI,,Cedrela,Meliaceae,,,,,,,,https://id.biodiversity.org.au/node/apni/9261145,,, Cedronella canariensis,Cedronella canariensis,species,accepted,APC,,Cedronella,Lamiaceae,Cedronella canariensis,,"SA (naturalised), Vic (doubtfully naturalised), Tas (naturalised)",naturalised,Cedronella canariensis (L.) Webb & Berthel.,https://id.biodiversity.org.au/node/apni/2886177,https://id.biodiversity.org.au/node/apni/2904780,https://id.biodiversity.org.au/taxon/apni/51696573,https://id.biodiversity.org.au/name/apni/57694,https://id.biodiversity.org.au/node/apni/2886177,accepted Cedrus deodara,Cedrus deodara,species,accepted,APC,,Cedrus,Pinaceae,Cedrus deodara,,Vic (doubtfully naturalised),naturalised,Cedrus deodara (Roxb. ex D.Don) G.Don,https://id.biodiversity.org.au/node/apni/2902174,https://id.biodiversity.org.au/node/apni/2913195,https://id.biodiversity.org.au/node/apni/7742574,https://id.biodiversity.org.au/name/apni/120997,https://id.biodiversity.org.au/node/apni/2902174,accepted Ceiba speciosa,Ceiba speciosa,species,accepted,APC,,Ceiba,Malvaceae,Ceiba speciosa,,"Qld (doubtfully naturalised), NSW (naturalised)",naturalised,"Ceiba speciosa (A.St.-Hil., A.Juss. & Cambess.) Ravenna",https://id.biodiversity.org.au/node/apni/2895752,https://id.biodiversity.org.au/node/apni/2916633,https://id.biodiversity.org.au/taxon/apni/51439248,https://id.biodiversity.org.au/name/apni/190383,https://id.biodiversity.org.au/node/apni/2895752,accepted @@ -14116,7 +14116,6 @@ Entolasia stricta,Entolasia stricta,species,accepted,APC,,Entolasia,Poaceae,Ento Entolasia whiteana,Entolasia whiteana,species,accepted,APC,,Entolasia,Poaceae,Entolasia whiteana,,"Qld, NSW",native,Entolasia whiteana C.E.Hubb.,https://id.biodiversity.org.au/node/apni/2896076,https://id.biodiversity.org.au/node/apni/2905731,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/114101,https://id.biodiversity.org.au/node/apni/2896076,accepted Enydra fluctuans,Enydra fluctuans,species,accepted,APC,,Enydra,Asteraceae,Enydra fluctuans,,"NT (doubtfully naturalised), Qld (naturalised)",naturalised,Enydra fluctuans Lour.,https://id.biodiversity.org.au/node/apni/2901905,https://id.biodiversity.org.au/node/apni/2907537,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/114158,https://id.biodiversity.org.au/node/apni/2901905,accepted Enydra woollsii,Enydra woollsii,species,accepted,APC,,Enydra,Asteraceae,Enydra woollsii,,"Qld, NSW",native,Enydra woollsii F.Muell.,https://id.biodiversity.org.au/node/apni/2887477,https://id.biodiversity.org.au/node/apni/2907537,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/114252,https://id.biodiversity.org.au/node/apni/2887477,accepted -Epacridaceae,Epacridaceae,family,family accepted,APC,,,Epacridaceae,,,,,,,,,,, Epacris acuminata,Epacris acuminata,species,accepted,APC,,Epacris,Ericaceae,Epacris acuminata,,Tas,native,Epacris acuminata Benth.,https://id.biodiversity.org.au/node/apni/2915858,https://id.biodiversity.org.au/taxon/apni/51435301,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/63071,https://id.biodiversity.org.au/node/apni/2915858,accepted Epacris apiculata,Epacris apiculata,species,accepted,APC,,Epacris,Ericaceae,Epacris apiculata,,NSW,native,Epacris apiculata A.Cunn.,https://id.biodiversity.org.au/taxon/apni/51302247,https://id.biodiversity.org.au/taxon/apni/51435301,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/63115,https://id.biodiversity.org.au/taxon/apni/51302247,accepted Rupicola apiculata,Epacris apiculata,species,accepted,APC,,Epacris,Ericaceae,Epacris apiculata,,NSW,native,Epacris apiculata A.Cunn.,https://id.biodiversity.org.au/taxon/apni/51302247,https://id.biodiversity.org.au/taxon/apni/51435301,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/63115,https://id.biodiversity.org.au/instance/apni/51302245,nomenclatural synonym @@ -14897,6 +14896,7 @@ Erica speciosa,Erica speciosa,species,accepted,APC,,Erica,Ericaceae,Erica specio Erica subulata,Erica subulata,species,accepted,APC,,Erica,Ericaceae,Erica subulata,,SA (naturalised),naturalised,Erica subulata J.C.Wendl.,https://id.biodiversity.org.au/node/apni/2914031,https://id.biodiversity.org.au/taxon/apni/51435316,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/239771,https://id.biodiversity.org.au/node/apni/2914031,accepted Erica vestita,Erica vestita,species,accepted,APC,,Erica,Ericaceae,Erica vestita,,SA (naturalised),naturalised,Erica vestita Thunb.,https://id.biodiversity.org.au/node/apni/2895371,https://id.biodiversity.org.au/taxon/apni/51435316,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/239774,https://id.biodiversity.org.au/node/apni/2895371,accepted Erica x darleyenisis,Erica x darleyenisis,species,accepted,APC,,Erica,Ericaceae,Erica x darleyenisis,,SA (doubtfully naturalised),naturalised,Erica x darleyenisis Bean,https://id.biodiversity.org.au/node/apni/2899844,https://id.biodiversity.org.au/taxon/apni/51435316,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/239662,https://id.biodiversity.org.au/node/apni/2899844,accepted +Ericaceae sp. [Epacridaceae; ANBG_2019],Ericaceae sp. [Epacridaceae; ANBG_2019],family,family accepted,APC,,,Ericaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51738121,,, Erichsenia uncinata,Erichsenia uncinata,species,accepted,APC,,Erichsenia,Fabaceae,Erichsenia uncinata,,WA,native,Erichsenia uncinata Hemsl.,https://id.biodiversity.org.au/node/apni/2917781,https://id.biodiversity.org.au/node/apni/2913823,https://id.biodiversity.org.au/taxon/apni/51702961,https://id.biodiversity.org.au/name/apni/112977,https://id.biodiversity.org.au/node/apni/2917781,accepted Ericksonella saccharata,Ericksonella saccharata,species,accepted,APC,,Ericksonella,Orchidaceae,Ericksonella saccharata,,WA,native,Ericksonella saccharata (Rchb.f.) Hopper & A.P.Br.,https://id.biodiversity.org.au/taxon/apni/51405066,https://id.biodiversity.org.au/taxon/apni/51405064,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/188942,https://id.biodiversity.org.au/taxon/apni/51405066,accepted Ericomyrtus drummondii,Ericomyrtus drummondii,species,accepted,APC,,Ericomyrtus,Myrtaceae,Ericomyrtus drummondii,,WA,native,Ericomyrtus drummondii Turcz.,https://id.biodiversity.org.au/taxon/apni/51311141,https://id.biodiversity.org.au/taxon/apni/51311137,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/113041,https://id.biodiversity.org.au/taxon/apni/51311141,accepted @@ -15450,6 +15450,7 @@ Eucalyptus cypellocarpa,Eucalyptus cypellocarpa ,species,accepted,APC, Eucalyptu Eucalyptus dalrympleana,Eucalyptus dalrympleana,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dalrympleana,,"SA, Qld, NSW, ACT, Vic, Tas",native,Eucalyptus dalrympleana Maiden,https://id.biodiversity.org.au/node/apni/2912408,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/69806,https://id.biodiversity.org.au/node/apni/2912408,accepted Eucalyptus aff. dalrympleana (Howmans Gap),Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293),subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dalrympleana,Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293),Vic,native,Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293) Vic. Herbarium,https://id.biodiversity.org.au/node/apni/2902213,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/203948,https://id.biodiversity.org.au/instance/apni/853263,taxonomic synonym Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293),Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293),subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dalrympleana,Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293),Vic,native,Eucalyptus dalrympleana subsp. Howmans Gap (N.G.Walsh 5293) Vic. Herbarium,https://id.biodiversity.org.au/node/apni/2902213,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/203948,https://id.biodiversity.org.au/node/apni/2902213,accepted +Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923),Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923),subspecies,unknown,,,Eucalyptus,Myrtaceae,Eucalyptus dalrympleana,Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923),,,,,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, Eucalyptus dalrympleana subsp. dalrympleana,Eucalyptus dalrympleana subsp. dalrympleana,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dalrympleana,Eucalyptus dalrympleana subsp. dalrympleana,"SA, NSW, ACT, Vic, Tas",native,Eucalyptus dalrympleana Maiden subsp. dalrympleana,https://id.biodiversity.org.au/node/apni/2907621,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/69821,https://id.biodiversity.org.au/node/apni/2907621,accepted Eucalyptus dalrympleana subsp. heptantha,Eucalyptus dalrympleana subsp. heptantha,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dalrympleana,Eucalyptus dalrympleana subsp. heptantha,"Qld, NSW",native,Eucalyptus dalrympleana subsp. heptantha L.A.S.Johnson,https://id.biodiversity.org.au/node/apni/2901049,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/69839,https://id.biodiversity.org.au/node/apni/2901049,accepted Eucalyptus dalveenica,Eucalyptus dalveenica,species,unplaced,APNI,,Eucalyptus,Myrtaceae,Eucalyptus dalveenica,,,,"Eucalyptus dalveenica T.L.Collins, R.L.Andrew & J.J.Bruhl",,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/51306587,, @@ -15508,6 +15509,7 @@ Eucalyptus doratoxylon,Eucalyptus doratoxylon,species,accepted,APC,,Eucalyptus,M Eucalyptus benthamii var. dorrigoensis,Eucalyptus dorrigoensis,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dorrigoensis,,NSW,native,Eucalyptus dorrigoensis (Blakely) L.A.S.Johnson & K.D.Hill,https://id.biodiversity.org.au/node/apni/2903351,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/118668,https://id.biodiversity.org.au/instance/apni/853298,nomenclatural synonym Eucalyptus dorrigoensis,Eucalyptus dorrigoensis,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dorrigoensis,,NSW,native,Eucalyptus dorrigoensis (Blakely) L.A.S.Johnson & K.D.Hill,https://id.biodiversity.org.au/node/apni/2903351,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/118668,https://id.biodiversity.org.au/node/apni/2903351,accepted Eucalyptus drummondii,Eucalyptus drummondii,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus drummondii,,WA,native,Eucalyptus drummondii Benth.,https://id.biodiversity.org.au/taxon/apni/51290399,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/71639,https://id.biodiversity.org.au/taxon/apni/51290399,accepted +Eucalyptus graniticola,Eucalyptus drummondii x Eucalyptus rudis,species,taxonomic synonym,APC,,Eucalyptus,Myrtaceae,Eucalyptus drummondii x Eucalyptus rudis,,,,,https://id.biodiversity.org.au/taxon/apni/51290398,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, Eucalyptus sp. Wagerup (L.Johnson 9127 & B.Briggs),Eucalyptus drummondii x Eucalyptus rudis,species,taxonomic synonym,APC,,Eucalyptus,Myrtaceae,Eucalyptus drummondii x Eucalyptus rudis,,,,,https://id.biodiversity.org.au/taxon/apni/51290398,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, Eucalyptus dumosa,Eucalyptus dumosa ,species,accepted,APC, Eucalyptus percostata (pro parte misapplied) | Eucalyptus cyanophylla (misapplied),Eucalyptus,Myrtaceae,Eucalyptus dumosa,,"SA, NSW, Vic",native,Eucalyptus dumosa A.Cunn. ex J.Oxley,https://id.biodiversity.org.au/node/apni/2894653,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/71651,, Eucalyptus dundasii,Eucalyptus dundasii,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus dundasii,,WA,native,Eucalyptus dundasii Maiden,https://id.biodiversity.org.au/node/apni/2914527,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/71729,https://id.biodiversity.org.au/node/apni/2914527,accepted @@ -15826,6 +15828,7 @@ Eucalyptus mannensis,Eucalyptus mannensis,species,accepted,APC,,Eucalyptus,Myrta Eucalyptus mannensis subsp. mannensis,Eucalyptus mannensis subsp. mannensis,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus mannensis,Eucalyptus mannensis subsp. mannensis,"WA, NT, SA",native,Eucalyptus mannensis Boomsma subsp. mannensis,https://id.biodiversity.org.au/node/apni/2891886,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/118950,https://id.biodiversity.org.au/node/apni/2891886,accepted Eucalyptus mannensis subsp. vespertina,Eucalyptus mannensis subsp. vespertina,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus mannensis,Eucalyptus mannensis subsp. vespertina,WA,native,Eucalyptus mannensis subsp. vespertina L.A.S.Johnson & K.D.Hill,https://id.biodiversity.org.au/node/apni/2900366,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/118951,https://id.biodiversity.org.au/node/apni/2900366,accepted Eucalyptus mannifera,Eucalyptus mannifera,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus mannifera,,"NSW, ACT, Vic",native,Eucalyptus mannifera Mudie,https://id.biodiversity.org.au/node/apni/2902524,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/99197,https://id.biodiversity.org.au/node/apni/2902524,accepted +Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066),Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066),subspecies,unknown,,,Eucalyptus,Myrtaceae,Eucalyptus mannifera,Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066),,,,,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, Eucalyptus mannifera subsp. gullickii,Eucalyptus mannifera subsp. gullickii,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus mannifera,Eucalyptus mannifera subsp. gullickii,NSW,native,Eucalyptus mannifera subsp. gullickii (R.T.Baker & H.G.Sm.) L.A.S.Johnson,https://id.biodiversity.org.au/node/apni/2910559,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/99259,https://id.biodiversity.org.au/node/apni/2910559,accepted Eucalyptus maculosa,Eucalyptus mannifera subsp. mannifera,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus mannifera,Eucalyptus mannifera subsp. mannifera,"NSW, ACT, Vic",native,Eucalyptus mannifera Mudie subsp. mannifera,https://id.biodiversity.org.au/node/apni/2921304,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/99302,https://id.biodiversity.org.au/instance/apni/938567,taxonomic synonym Eucalyptus mannifera subsp. maculosa,Eucalyptus mannifera subsp. mannifera,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus mannifera,Eucalyptus mannifera subsp. mannifera,"NSW, ACT, Vic",native,Eucalyptus mannifera Mudie subsp. mannifera,https://id.biodiversity.org.au/node/apni/2921304,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/99302,https://id.biodiversity.org.au/instance/apni/938569,taxonomic synonym @@ -16048,6 +16051,7 @@ Eucalyptus platyphylla,Eucalyptus platyphylla,species,accepted,APC,,Eucalyptus,M Eucalyptus platypus,Eucalyptus platypus,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus platypus,,WA,native,Eucalyptus platypus Hook.,https://id.biodiversity.org.au/node/apni/7722602,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/105636,https://id.biodiversity.org.au/node/apni/7722602,accepted Eucalyptus platypus subsp. congregata,Eucalyptus platypus subsp. congregata,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus platypus,Eucalyptus platypus subsp. congregata,WA,native,Eucalyptus platypus subsp. congregata Brooker & Hopper,https://id.biodiversity.org.au/node/apni/2901895,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/119651,https://id.biodiversity.org.au/node/apni/2901895,accepted Eucalyptus platypus subsp. platypus,Eucalyptus platypus subsp. platypus,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus platypus,Eucalyptus platypus subsp. platypus,WA,native,Eucalyptus platypus Hook. subsp. platypus,https://id.biodiversity.org.au/node/apni/2904783,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/164117,https://id.biodiversity.org.au/node/apni/2904783,accepted +Eucalyptus eyreana MS,Eucalyptus pleurocarpa,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus pleurocarpa,,WA,native,Eucalyptus pleurocarpa Schauer,https://id.biodiversity.org.au/node/apni/2893815,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/105727,https://id.biodiversity.org.au/instance/apni/854136,taxonomic synonym Eucalyptus pleurocarpa,Eucalyptus pleurocarpa,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus pleurocarpa,,WA,native,Eucalyptus pleurocarpa Schauer,https://id.biodiversity.org.au/node/apni/2893815,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/105727,https://id.biodiversity.org.au/node/apni/2893815,accepted Eucalyptus x tetragona,Eucalyptus pleurocarpa ,species,accepted,APC, NA,Eucalyptus,Myrtaceae,Eucalyptus pleurocarpa,,WA,native,Eucalyptus pleurocarpa Schauer,https://id.biodiversity.org.au/node/apni/2893815,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/105727,, Eucalyptus pleurocorys,Eucalyptus pleurocorys,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus pleurocorys,,WA,native,Eucalyptus pleurocorys L.A.S.Johnson & K.D.Hill,https://id.biodiversity.org.au/node/apni/2899278,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/170837,https://id.biodiversity.org.au/node/apni/2899278,accepted @@ -16408,7 +16412,6 @@ Eucalyptus sideroxylon subsp. tricarpa,Eucalyptus tricarpa,species,accepted,APC, Eucalyptus tricarpa,Eucalyptus tricarpa,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus tricarpa,,"SA (doubtfully naturalised), NSW, Vic",native and naturalised,Eucalyptus tricarpa (L.A.S.Johnson) L.A.S.Johnson & K.D.Hill,https://id.biodiversity.org.au/taxon/apni/51350523,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/118693,https://id.biodiversity.org.au/taxon/apni/51350523,accepted Eucalyptus tricarpa subsp. decora,Eucalyptus tricarpa subsp. decora,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus tricarpa,Eucalyptus tricarpa subsp. decora,Vic,native,Eucalyptus tricarpa subsp. decora Rule,https://id.biodiversity.org.au/node/apni/2919634,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/191736,https://id.biodiversity.org.au/node/apni/2919634,accepted Eucalyptus tricarpa subsp. tricarpa,Eucalyptus tricarpa subsp. tricarpa,subspecies,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus tricarpa,Eucalyptus tricarpa subsp. tricarpa,"SA (doubtfully naturalised), NSW, Vic",native and naturalised,Eucalyptus tricarpa (L.A.S.Johnson) L.A.S.Johnson & K.D.Hill subsp. tricarpa,https://id.biodiversity.org.au/taxon/apni/51350514,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/205049,https://id.biodiversity.org.au/taxon/apni/51350514,accepted -Eucalyptus trichopoda,Eucalyptus trichopoda,species,unknown,,,Eucalyptus,Myrtaceae,Eucalyptus trichopoda,,,,,,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, Eucalyptus triflora,Eucalyptus triflora,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus triflora,,Vic,native,Eucalyptus triflora (Maiden) Blakely,https://id.biodiversity.org.au/node/apni/2886631,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/55844,https://id.biodiversity.org.au/node/apni/2886631,accepted Eucalyptus trivalva,Eucalyptus trivalva,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus trivalva,,"WA, NT, SA",native,Eucalyptus trivalva Blakely,https://id.biodiversity.org.au/node/apni/2916585,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/70691,https://id.biodiversity.org.au/node/apni/2916585,accepted Eucalyptus trivalvis,Eucalyptus trivalva,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus trivalva,,"WA, NT, SA",native,Eucalyptus trivalva Blakely,https://id.biodiversity.org.au/node/apni/2916585,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/70691,https://id.biodiversity.org.au/instance/apni/8318278,orthographic variant @@ -16537,7 +16540,6 @@ Eucalyptus x carnabyi,Eucalyptus x carnabyi,species,excluded,APC,,Eucalyptus,Myr Eucalyptus x chrysantha,Eucalyptus x chrysantha,species,excluded,APC,,Eucalyptus,Myrtaceae,Eucalyptus x chrysantha,,,,,https://id.biodiversity.org.au/node/apni/5249296,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, Eucalyptus x conjuncta,Eucalyptus x conjuncta,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus x conjuncta,,NSW,native,Eucalyptus x conjuncta L.A.S.Johnson & K.D.Hill,https://id.biodiversity.org.au/node/apni/2903413,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/118738,https://id.biodiversity.org.au/node/apni/2903413,accepted Eucalyptus x erythrandra,Eucalyptus x erythrandra,species,excluded,APC,,Eucalyptus,Myrtaceae,Eucalyptus x erythrandra,,,,,https://id.biodiversity.org.au/node/apni/5267751,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,,, -Eucalyptus x graniticola,Eucalyptus x graniticola,species,unplaced,APNI,,Eucalyptus,Myrtaceae,Eucalyptus x graniticola,,,,Eucalyptus x graniticola Hopper,,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/51307402,, Eucalyptus impensa,Eucalyptus x impensa,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus x impensa,,WA,native,Eucalyptus x impensa Brooker & Hopper,https://id.biodiversity.org.au/node/apni/2908082,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/119583,https://id.biodiversity.org.au/instance/apni/954223,taxonomic synonym Eucalyptus x impensa,Eucalyptus x impensa,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus x impensa,,WA,native,Eucalyptus x impensa Brooker & Hopper,https://id.biodiversity.org.au/node/apni/2908082,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/119583,https://id.biodiversity.org.au/node/apni/2908082,accepted Eucalyptus x kalangadooensis,Eucalyptus x kalangadooensis,species,accepted,APC,,Eucalyptus,Myrtaceae,Eucalyptus x kalangadooensis,,SA,native,Eucalyptus x kalangadooensis Maiden & Blakely,https://id.biodiversity.org.au/node/apni/7639735,https://id.biodiversity.org.au/taxon/apni/51738743,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/83459,https://id.biodiversity.org.au/node/apni/7639735,accepted @@ -17417,7 +17419,7 @@ Freesia alba x Freesia leichtlinii,Freesia leichtlinii subsp. leichtlinii x Free Freesia hybrid,Freesia leichtlinii subsp. leichtlinii x Freesia leichtlinii subsp. alba,subspecies,accepted,APC,,Freesia,Iridaceae,Freesia leichtlinii,Freesia leichtlinii subsp. leichtlinii x Freesia leichtlinii subsp. alba,"WA (naturalised), SA (naturalised), Qld (naturalised), NSW (naturalised), ACT (naturalised), Vic (naturalised)",naturalised,Freesia leichtlinii Klatt subsp. leichtlinii x Freesia leichtlinii subsp. alba (G.L.Mey.) J.C.Manning & Goldblatt,https://id.biodiversity.org.au/node/apni/2908401,https://id.biodiversity.org.au/node/apni/2913899,https://id.biodiversity.org.au/taxon/apni/51438006,https://id.biodiversity.org.au/name/apni/241787,https://id.biodiversity.org.au/instance/apni/953836,taxonomic synonym Freesia leichtlinii subsp. leichtlinii x Freesia leichtlinii subsp. alba,Freesia leichtlinii subsp. leichtlinii x Freesia leichtlinii subsp. alba,subspecies,accepted,APC,,Freesia,Iridaceae,Freesia leichtlinii,Freesia leichtlinii subsp. leichtlinii x Freesia leichtlinii subsp. alba,"WA (naturalised), SA (naturalised), Qld (naturalised), NSW (naturalised), ACT (naturalised), Vic (naturalised)",naturalised,Freesia leichtlinii Klatt subsp. leichtlinii x Freesia leichtlinii subsp. alba (G.L.Mey.) J.C.Manning & Goldblatt,https://id.biodiversity.org.au/node/apni/2908401,https://id.biodiversity.org.au/node/apni/2913899,https://id.biodiversity.org.au/taxon/apni/51438006,https://id.biodiversity.org.au/name/apni/241787,https://id.biodiversity.org.au/node/apni/2908401,accepted Freesia x,Freesia x,genus,genus accepted,APC,,Freesia,Iridaceae,,,,,,,https://id.biodiversity.org.au/node/apni/2913899,https://id.biodiversity.org.au/taxon/apni/51438006,,, -Freesia x [Freesia alba x leichtlinii; Standish_2019],Freesia x [Freesia alba x leichtlinii; Standish_2019],genus,genus accepted,APC,,Freesia,Iridaceae,,,,,,,https://id.biodiversity.org.au/node/apni/2913899,https://id.biodiversity.org.au/taxon/apni/51438006,,, +Freesia x [Freesia alba x Freesia leichtlinii],Freesia x [Freesia alba x Freesia leichtlinii],genus,genus accepted,APC,,Freesia,Iridaceae,,,,,,,https://id.biodiversity.org.au/node/apni/2913899,https://id.biodiversity.org.au/taxon/apni/51438006,,, Freycinetia baueriana,Freycinetia baueriana,species,accepted,APC,,Freycinetia,Pandanaceae,Freycinetia baueriana,,NI,native,Freycinetia baueriana Endl.,https://id.biodiversity.org.au/node/apni/2890239,https://id.biodiversity.org.au/node/apni/2892792,https://id.biodiversity.org.au/taxon/apni/51442084,https://id.biodiversity.org.au/name/apni/60483,https://id.biodiversity.org.au/node/apni/2890239,accepted Freycinetia baueriana subsp. baueriana,Freycinetia baueriana subsp. baueriana,subspecies,accepted,APC,,Freycinetia,Pandanaceae,Freycinetia baueriana,Freycinetia baueriana subsp. baueriana,NI,native,Freycinetia baueriana Endl. subsp. baueriana,https://id.biodiversity.org.au/node/apni/2911303,https://id.biodiversity.org.au/node/apni/2892792,https://id.biodiversity.org.au/taxon/apni/51442084,https://id.biodiversity.org.au/name/apni/156433,https://id.biodiversity.org.au/node/apni/2911303,accepted Freycinetia excelsa,Freycinetia excelsa,species,accepted,APC,,Freycinetia,Pandanaceae,Freycinetia excelsa,,"NT, Qld, NSW",native,Freycinetia excelsa F.Muell.,https://id.biodiversity.org.au/node/apni/2910420,https://id.biodiversity.org.au/node/apni/2892792,https://id.biodiversity.org.au/taxon/apni/51442084,https://id.biodiversity.org.au/name/apni/60510,https://id.biodiversity.org.au/node/apni/2910420,accepted @@ -22302,7 +22304,7 @@ Kalanchoe longiflora,Kalanchoe sexangularis,species,accepted,APC,,Kalanchoe,Cras Kalanchoe sexangularis,Kalanchoe sexangularis,species,accepted,APC,,Kalanchoe,Crassulaceae,Kalanchoe sexangularis,,NSW (naturalised),naturalised,Kalanchoe sexangularis N.E.Br.,https://id.biodiversity.org.au/node/apni/2908753,https://id.biodiversity.org.au/node/apni/2903218,https://id.biodiversity.org.au/taxon/apni/51270792,https://id.biodiversity.org.au/name/apni/219176,https://id.biodiversity.org.au/node/apni/2908753,accepted Kalanchoe spathulata,Kalanchoe spathulata,species,accepted,APC,,Kalanchoe,Crassulaceae,Kalanchoe spathulata,,WA,native,Kalanchoe spathulata DC.,https://id.biodiversity.org.au/node/apni/2897512,https://id.biodiversity.org.au/node/apni/2903218,https://id.biodiversity.org.au/taxon/apni/51270792,https://id.biodiversity.org.au/name/apni/219177,https://id.biodiversity.org.au/node/apni/2897512,accepted Kalanchoe spathulata var. spathulata,Kalanchoe spathulata var. spathulata,variety,accepted,APC,,Kalanchoe,Crassulaceae,Kalanchoe spathulata,Kalanchoe spathulata var. spathulata,WA,native,Kalanchoe spathulata DC. var. spathulata,https://id.biodiversity.org.au/node/apni/2892043,https://id.biodiversity.org.au/node/apni/2903218,https://id.biodiversity.org.au/taxon/apni/51270792,https://id.biodiversity.org.au/name/apni/219178,https://id.biodiversity.org.au/node/apni/2892043,accepted -Kali sp. [Sasola kali; Islam_1999_1],Kali sp. [Sasola kali; Islam_1999_1],genus,genus unplaced by APC,APNI,,Kali,Chenopodiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51613011,,, +Kali sp. [Sasola kali; Islam_1999_1],Kali sp. [Sasola kali; Islam_1999_1],genus,unknown,APNI,,Kali,Chenopodiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51613011,,, Kardomia granitica,Kardomia granitica,species,accepted,APC,,Kardomia,Myrtaceae,Kardomia granitica,,Qld,native,Kardomia granitica (A.R.Bean) Peter G.Wilson,https://id.biodiversity.org.au/node/apni/2913084,https://id.biodiversity.org.au/node/apni/2916280,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/207073,https://id.biodiversity.org.au/node/apni/2913084,accepted Babingtonia jucunda,Kardomia jucunda,species,accepted,APC,,Kardomia,Myrtaceae,Kardomia jucunda,,"Qld, NSW",native,Kardomia jucunda (S.T.Blake) Peter G.Wilson,https://id.biodiversity.org.au/node/apni/2895929,https://id.biodiversity.org.au/node/apni/2916280,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/207074,https://id.biodiversity.org.au/instance/apni/858339,nomenclatural synonym Kardomia jucunda,Kardomia jucunda,species,accepted,APC,,Kardomia,Myrtaceae,Kardomia jucunda,,"Qld, NSW",native,Kardomia jucunda (S.T.Blake) Peter G.Wilson,https://id.biodiversity.org.au/node/apni/2895929,https://id.biodiversity.org.au/node/apni/2916280,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/207074,https://id.biodiversity.org.au/node/apni/2895929,accepted @@ -23971,7 +23973,7 @@ Levieria acuminata,Levieria acuminata,species,accepted,APC,,Levieria,Monimiaceae Leycesteria formosa,Leycesteria formosa,species,accepted,APC,,Leycesteria,Caprifoliaceae,Leycesteria formosa,,"SA (naturalised), NSW (naturalised), ACT (doubtfully naturalised), Vic (naturalised), Tas (naturalised)",naturalised,Leycesteria formosa Wall.,https://id.biodiversity.org.au/node/apni/2906489,https://id.biodiversity.org.au/node/apni/2920596,https://id.biodiversity.org.au/taxon/apni/51612988,https://id.biodiversity.org.au/name/apni/69154,https://id.biodiversity.org.au/node/apni/2906489,accepted Leymus arenarius,Leymus arenarius,species,accepted,APC,,Leymus,Poaceae,Leymus arenarius,,"Vic (formerly naturalised), Tas (naturalised)",naturalised,Leymus arenarius (L.) Hochst.,https://id.biodiversity.org.au/node/apni/2892193,https://id.biodiversity.org.au/node/apni/2913630,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/116486,https://id.biodiversity.org.au/node/apni/2892193,accepted Leymus multicaulis,Leymus multicaulis,species,accepted,APC,,Leymus,Poaceae,Leymus multicaulis,,Vic (formerly naturalised),naturalised,Leymus multicaulis (Kar. & Kir.) Tzvelev,https://id.biodiversity.org.au/node/apni/2903751,https://id.biodiversity.org.au/node/apni/2913630,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/116976,https://id.biodiversity.org.au/node/apni/2903751,accepted -Lhotzkya sp. [White_2020],Lhotzkya sp. [White_2020],genus,genus unplaced by APC,APNI,,Lhotzkya,Myrtaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51738744,,, +Lhotzkya sp. [White_2020],Lhotzkya sp. [White_2020],genus,unknown,APNI,,Lhotzkya,Myrtaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51738744,,, Libertia paniculata,Libertia paniculata,species,accepted,APC,,Libertia,Iridaceae,Libertia paniculata,,"Qld, NSW, Vic",native,Libertia paniculata (R.Br.) Spreng.,https://id.biodiversity.org.au/node/apni/2897961,https://id.biodiversity.org.au/taxon/apni/51287732,https://id.biodiversity.org.au/taxon/apni/51438006,https://id.biodiversity.org.au/name/apni/91162,https://id.biodiversity.org.au/node/apni/2897961,accepted Libertia pulchella,Libertia pulchella,species,accepted,APC,,Libertia,Iridaceae,Libertia pulchella,,"NSW, Vic, Tas",native,Libertia pulchella (R.Br.) Spreng.,https://id.biodiversity.org.au/taxon/apni/51287731,https://id.biodiversity.org.au/taxon/apni/51287732,https://id.biodiversity.org.au/taxon/apni/51438006,https://id.biodiversity.org.au/name/apni/91180,https://id.biodiversity.org.au/taxon/apni/51287731,accepted Libertia pulchella var. pulchella,Libertia pulchella var. pulchella,variety,accepted,APC,,Libertia,Iridaceae,Libertia pulchella,Libertia pulchella var. pulchella,"NSW, Vic, Tas",native,Libertia pulchella (R.Br.) Spreng. var. pulchella,https://id.biodiversity.org.au/node/apni/2911508,https://id.biodiversity.org.au/taxon/apni/51287732,https://id.biodiversity.org.au/taxon/apni/51438006,https://id.biodiversity.org.au/name/apni/116156,https://id.biodiversity.org.au/node/apni/2911508,accepted @@ -24176,6 +24178,7 @@ Villarsia violifolia,Liparophyllum violifolium,species,accepted,APC,,Liparophyll Lipocarpha sp. [White_2020],Lipocarpha sp. [White_2020],genus,genus accepted,APC,,Lipocarpha,Cyperaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51434408,https://id.biodiversity.org.au/taxon/apni/51460154,,, Lippia alba,Lippia alba,species,accepted,APC,,Lippia,Verbenaceae,Lippia alba,,"NT (naturalised), Qld (naturalised)",naturalised,Lippia alba (Mill.) N.E.Br. ex Britton & P.Wilson,https://id.biodiversity.org.au/taxon/apni/51408442,https://id.biodiversity.org.au/taxon/apni/51408443,https://id.biodiversity.org.au/taxon/apni/51448662,https://id.biodiversity.org.au/name/apni/66442,https://id.biodiversity.org.au/taxon/apni/51408442,accepted Lippia alba var. alba,Lippia alba var. alba,variety,accepted,APC,,Lippia,Verbenaceae,Lippia alba,Lippia alba var. alba,"NT (naturalised), Qld (naturalised)",naturalised,Lippia alba (Mill.) N.E.Br. ex Britton & P.Wilson var. alba,https://id.biodiversity.org.au/taxon/apni/51408441,https://id.biodiversity.org.au/taxon/apni/51408443,https://id.biodiversity.org.au/taxon/apni/51448662,https://id.biodiversity.org.au/name/apni/171089,https://id.biodiversity.org.au/taxon/apni/51408441,accepted +Liquidambar styraciflua,Liquidambar styraciflua,species,unknown,,,Liquidambar,,Liquidambar styraciflua,,,,,,,,,, Lissanthe brevistyla,Lissanthe brevistyla,species,accepted,APC,,Lissanthe,Ericaceae,Lissanthe brevistyla,,Qld,native,Lissanthe brevistyla A.R.Bean,https://id.biodiversity.org.au/node/apni/2889105,https://id.biodiversity.org.au/taxon/apni/51435228,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/180706,https://id.biodiversity.org.au/node/apni/2889105,accepted Lissanthe pleurandroides,Lissanthe pleurandroides,species,accepted,APC,,Lissanthe,Ericaceae,Lissanthe pleurandroides,,WA,native,Lissanthe pleurandroides (F.Muell.) Crayn & Hislop,https://id.biodiversity.org.au/node/apni/2905811,https://id.biodiversity.org.au/taxon/apni/51435228,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/197674,https://id.biodiversity.org.au/node/apni/2905811,accepted Lissanthe pluriloculata,Lissanthe pluriloculata,species,accepted,APC,,Lissanthe,Ericaceae,Lissanthe pluriloculata,,Qld,native,"Lissanthe pluriloculata (F.Muell.) J.M.Powell, Crayn & E.A.Br.",https://id.biodiversity.org.au/node/apni/2905832,https://id.biodiversity.org.au/taxon/apni/51435228,https://id.biodiversity.org.au/taxon/apni/51738121,https://id.biodiversity.org.au/name/apni/181394,https://id.biodiversity.org.au/node/apni/2905832,accepted @@ -24467,11 +24470,11 @@ Lophostemon grandiflorus subsp. riparius,Lophostemon grandiflorus subsp. ripariu Lophostemon lactifluus,Lophostemon lactifluus,species,accepted,APC,,Lophostemon,Myrtaceae,Lophostemon lactifluus,,NT,native,Lophostemon lactifluus (F.Muell.) Peter G.Wilson & J.T.Waterh.,https://id.biodiversity.org.au/node/apni/2909664,https://id.biodiversity.org.au/node/apni/2888397,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/96594,https://id.biodiversity.org.au/node/apni/2909664,accepted Lophostemon suaveolens,Lophostemon suaveolens,species,accepted,APC,,Lophostemon,Myrtaceae,Lophostemon suaveolens,,"Qld, NSW",native,Lophostemon suaveolens (Sol. ex Gaertn.) Peter G.Wilson & J.T.Waterh.,https://id.biodiversity.org.au/node/apni/2889131,https://id.biodiversity.org.au/node/apni/2888397,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/96619,https://id.biodiversity.org.au/node/apni/2889131,accepted Tristania suaveolens,Lophostemon suaveolens,species,accepted,APC,,Lophostemon,Myrtaceae,Lophostemon suaveolens,,"Qld, NSW",native,Lophostemon suaveolens (Sol. ex Gaertn.) Peter G.Wilson & J.T.Waterh.,https://id.biodiversity.org.au/node/apni/2889131,https://id.biodiversity.org.au/node/apni/2888397,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/96619,https://id.biodiversity.org.au/instance/apni/887283,nomenclatural synonym -Loranthaceae [Misteloe; Soper_2014],Loranthaceae [Misteloe; Soper_2014],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, -Loranthaceae or Viscaceae [mistletoe on Acacia aneura; Soper_2014],Loranthaceae or Viscaceae [mistletoe on Acacia aneura; Soper_2014],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, Loranthaceae sp. [Fonseca_2000],Loranthaceae sp. [Fonseca_2000],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, +Loranthaceae sp. [Misteloe; Soper_2014],Loranthaceae sp. [Misteloe; Soper_2014],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, Loranthaceae sp. [Mistletoe on Acacia],Loranthaceae sp. [Mistletoe on Acacia],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, Loranthaceae sp. [White_2020],Loranthaceae sp. [White_2020],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, +Loranthaceae sp. [mistletoe on Acacia aneura; Soper_2014],Loranthaceae sp. [mistletoe on Acacia aneura; Soper_2014],family,family accepted,APC,,,Loranthaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51438796,,, Lordhowea insularis,Lordhowea insularis,species,accepted,APC,,Lordhowea,Asteraceae,Lordhowea insularis,,LHI,native,Lordhowea insularis (Benth.) B.Nord.,https://id.biodiversity.org.au/node/apni/2918979,https://id.biodiversity.org.au/node/apni/2903943,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/118802,https://id.biodiversity.org.au/node/apni/2918979,accepted Lotononis bainesii,Lotononis bainesii,species,accepted,APC,,Lotononis,Fabaceae,Lotononis bainesii,,"Qld (naturalised), NSW (naturalised)",naturalised,Lotononis bainesii Baker,https://id.biodiversity.org.au/node/apni/2904277,https://id.biodiversity.org.au/node/apni/2898035,https://id.biodiversity.org.au/taxon/apni/51702961,https://id.biodiversity.org.au/name/apni/109834,https://id.biodiversity.org.au/node/apni/2904277,accepted Lotus angustissimus,Lotus angustissimus,species,accepted,APC,,Lotus,Fabaceae,Lotus angustissimus,,"WA (naturalised), SA (naturalised), NSW (naturalised), NI (naturalised), Vic (naturalised), Tas (native and naturalised)",native and naturalised,Lotus angustissimus L.,https://id.biodiversity.org.au/node/apni/2886127,https://id.biodiversity.org.au/taxon/apni/51436215,https://id.biodiversity.org.au/taxon/apni/51702961,https://id.biodiversity.org.au/name/apni/109894,https://id.biodiversity.org.au/node/apni/2886127,accepted @@ -26381,7 +26384,7 @@ Rapanea urceolata,Myrsine urceolata,species,accepted,APC,,Myrsine,Primulaceae,My Myrsine variabilis,Myrsine variabilis,species,accepted,APC,,Myrsine,Primulaceae,Myrsine variabilis,,"Qld, NSW",native,Myrsine variabilis R.Br.,https://id.biodiversity.org.au/node/apni/2906517,https://id.biodiversity.org.au/node/apni/2896339,https://id.biodiversity.org.au/taxon/apni/51445200,https://id.biodiversity.org.au/name/apni/86626,https://id.biodiversity.org.au/node/apni/2906517,accepted Rapanea variabilis,Myrsine variabilis,species,accepted,APC,,Myrsine,Primulaceae,Myrsine variabilis,,"Qld, NSW",native,Myrsine variabilis R.Br.,https://id.biodiversity.org.au/node/apni/2906517,https://id.biodiversity.org.au/node/apni/2896339,https://id.biodiversity.org.au/taxon/apni/51445200,https://id.biodiversity.org.au/name/apni/86626,https://id.biodiversity.org.au/instance/apni/852151,nomenclatural synonym Myrtaceae Gen. Nov. sp. (Boonjee BH 6589),Myrtaceae Gen. Nov. sp. (Boonjee BH 6589),species,unplaced,APNI,,Myrtaceae,Myrtaceae,Myrtaceae Gen. Nov. sp. (Boonjee BH 6589),,,,Myrtaceae Gen. Nov. sp. (Boonjee BH 6589),,,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/247322,, -Myrtella sp. [Myrtella; Schmidt_2003],Myrtella sp. [Myrtella; Schmidt_2003],genus,genus unplaced by APC,APNI,,Myrtella,Myrtaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51738744,,, +Myrtella sp. [Myrtella; Schmidt_2003],Myrtella sp. [Myrtella; Schmidt_2003],genus,unknown,APNI,,Myrtella,Myrtaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51738744,,, Myrtus communis,Myrtus communis,species,accepted,APC,,Myrtus,Myrtaceae,Myrtus communis,,SA (naturalised),naturalised,Myrtus communis L.,https://id.biodiversity.org.au/node/apni/2888573,https://id.biodiversity.org.au/node/apni/2886692,https://id.biodiversity.org.au/taxon/apni/51738744,https://id.biodiversity.org.au/name/apni/129729,https://id.biodiversity.org.au/node/apni/2888573,accepted Ammobium calyceroides,Nablonium calyceroides,species,accepted,APC,,Nablonium,Asteraceae,Nablonium calyceroides,,Tas,native,Nablonium calyceroides Cass.,https://id.biodiversity.org.au/node/apni/2907810,https://id.biodiversity.org.au/node/apni/2919155,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/61410,https://id.biodiversity.org.au/instance/apni/930165,nomenclatural synonym Nablonium calyceroides,Nablonium calyceroides,species,accepted,APC,,Nablonium,Asteraceae,Nablonium calyceroides,,Tas,native,Nablonium calyceroides Cass.,https://id.biodiversity.org.au/node/apni/2907810,https://id.biodiversity.org.au/node/apni/2919155,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/61410,https://id.biodiversity.org.au/node/apni/2907810,accepted @@ -29459,6 +29462,7 @@ Plantago triantha,Plantago triantha,species,accepted,APC,,Plantago,Plantaginacea Plantago turrifera,Plantago turrifera,species,accepted,APC,,Plantago,Plantaginaceae,Plantago turrifera,,"WA, SA, Qld, NSW (native and naturalised), Vic",native and naturalised,"Plantago turrifera B.G.Briggs, Carolin & Pulley",https://id.biodiversity.org.au/node/apni/2895983,https://id.biodiversity.org.au/node/apni/7745425,https://id.biodiversity.org.au/taxon/apni/51699383,https://id.biodiversity.org.au/name/apni/79077,https://id.biodiversity.org.au/node/apni/2895983,accepted Plantago varia,Plantago varia ,species,accepted,APC, Plantago cunninghamii (pro parte misapplied) | Plantago debilis (pro parte misapplied) | Plantago drummondii (pro parte misapplied) | Plantago exilis (pro parte misapplied) | Plantago gaudichaudii (pro parte misapplied) | Plantago hispida (pro parte misapplied) | Plantago sp. Mt Magnet (A.S.George 6793) (pro parte misapplied) | Plantago turrifera (pro parte misapplied) | Plantago hedleyi (misapplied),Plantago,Plantaginaceae,Plantago varia,,"SA, Qld, NSW, ACT, Vic, Tas",native,Plantago varia R.Br.,https://id.biodiversity.org.au/node/apni/2890708,https://id.biodiversity.org.au/node/apni/7745425,https://id.biodiversity.org.au/taxon/apni/51699383,https://id.biodiversity.org.au/name/apni/79100,, Platanus x hispanica,Platanus x hispanica 'Acerifolia',,accepted,APC,,Platanus,Platanaceae,,,"WA (naturalised), ACT (doubtfully naturalised)",naturalised,Platanus x hispanica 'Acerifolia',https://id.biodiversity.org.au/node/apni/2916742,https://id.biodiversity.org.au/node/apni/2913021,https://id.biodiversity.org.au/node/apni/2892018,,, +Platanus x hispanica ‘Acerifolia’,Platanus x hispanica ‘Acerifolia’,species,unknown,,,Platanus,Platanaceae,Platanus x hispanica ‘Acerifolia’,,,,,,https://id.biodiversity.org.au/node/apni/2913021,https://id.biodiversity.org.au/node/apni/2892018,,, Platostoma longicorne,Platostoma longicorne,species,accepted,APC,,Platostoma,Lamiaceae,Platostoma longicorne,,Qld,native,Platostoma longicorne (F.Muell.) A.J.Paton,https://id.biodiversity.org.au/node/apni/8764313,https://id.biodiversity.org.au/node/apni/8764318,https://id.biodiversity.org.au/taxon/apni/51696573,https://id.biodiversity.org.au/name/apni/199217,https://id.biodiversity.org.au/node/apni/8764313,accepted Platycapnos spicatus,Platycapnos spicatus,species,accepted,APC,,Platycapnos,Papaveraceae,Platycapnos spicatus,,SA (doubtfully naturalised),naturalised,Platycapnos spicatus (L.) Bernh.,https://id.biodiversity.org.au/node/apni/2894716,https://id.biodiversity.org.au/node/apni/2887214,https://id.biodiversity.org.au/taxon/apni/51291088,https://id.biodiversity.org.au/name/apni/79226,https://id.biodiversity.org.au/node/apni/2894716,accepted Platycapnos spicatus subsp. spicatus,Platycapnos spicatus subsp. spicatus,subspecies,accepted,APC,,Platycapnos,Papaveraceae,Platycapnos spicatus,Platycapnos spicatus subsp. spicatus,SA (doubtfully naturalised),naturalised,Platycapnos spicatus (L.) Bernh. subsp. spicatus,https://id.biodiversity.org.au/node/apni/2905161,https://id.biodiversity.org.au/node/apni/2887214,https://id.biodiversity.org.au/taxon/apni/51291088,https://id.biodiversity.org.au/name/apni/116726,https://id.biodiversity.org.au/node/apni/2905161,accepted @@ -32178,7 +32182,7 @@ Reseda lutea,Reseda lutea,species,accepted,APC,,Reseda,Resedaceae,Reseda lutea,, Reseda luteola,Reseda luteola,species,accepted,APC,,Reseda,Resedaceae,Reseda luteola,,"WA (naturalised), SA (naturalised), Qld (doubtfully naturalised), NSW (naturalised), ACT (naturalised), Vic (naturalised), Tas (naturalised)",naturalised,Reseda luteola L.,https://id.biodiversity.org.au/node/apni/2898583,https://id.biodiversity.org.au/node/apni/2891668,https://id.biodiversity.org.au/node/apni/2909315,https://id.biodiversity.org.au/name/apni/98378,https://id.biodiversity.org.au/node/apni/2898583,accepted Reseda odorata,Reseda odorata,species,accepted,APC,,Reseda,Resedaceae,Reseda odorata,,SA (naturalised),naturalised,Reseda odorata L.,https://id.biodiversity.org.au/node/apni/2907152,https://id.biodiversity.org.au/node/apni/2891668,https://id.biodiversity.org.au/node/apni/2909315,https://id.biodiversity.org.au/name/apni/98400,https://id.biodiversity.org.au/node/apni/2907152,accepted Reseda phyteuma,Reseda phyteuma,species,accepted,APC,,Reseda,Resedaceae,Reseda phyteuma,,"SA (naturalised), Vic (naturalised)",naturalised,Reseda phyteuma L.,https://id.biodiversity.org.au/node/apni/2903518,https://id.biodiversity.org.au/node/apni/2891668,https://id.biodiversity.org.au/node/apni/2909315,https://id.biodiversity.org.au/name/apni/128744,https://id.biodiversity.org.au/node/apni/2903518,accepted -Restio sp. [White_2020],Restio sp. [White_2020],genus,genus unplaced by APC,APNI,,Restio,Restionaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51670858,,, +Restio sp. [White_2020],Restio sp. [White_2020],genus,unknown,APNI,,Restio,Cyperaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51460154,,, Retama raetam,Retama raetam,species,accepted,APC,,Retama,Fabaceae,Retama raetam,,"WA (naturalised), SA (naturalised), Qld (doubtfully naturalised)",naturalised,Retama raetam (Forssk.) Webb & Berthel.,https://id.biodiversity.org.au/node/apni/2894625,https://id.biodiversity.org.au/node/apni/2920903,https://id.biodiversity.org.au/taxon/apni/51702961,https://id.biodiversity.org.au/name/apni/117010,https://id.biodiversity.org.au/node/apni/2894625,accepted Phebalium anceps,Rhadinothamnus anceps,species,accepted,APC,,Rhadinothamnus,Rutaceae,Rhadinothamnus anceps,,WA,native,Rhadinothamnus anceps (DC.) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2888230,https://id.biodiversity.org.au/node/apni/2910328,https://id.biodiversity.org.au/taxon/apni/51461748,https://id.biodiversity.org.au/name/apni/164713,https://id.biodiversity.org.au/instance/apni/816355,basionym Rhadinothamnus anceps,Rhadinothamnus anceps,species,accepted,APC,,Rhadinothamnus,Rutaceae,Rhadinothamnus anceps,,WA,native,Rhadinothamnus anceps (DC.) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2888230,https://id.biodiversity.org.au/node/apni/2910328,https://id.biodiversity.org.au/taxon/apni/51461748,https://id.biodiversity.org.au/name/apni/164713,https://id.biodiversity.org.au/node/apni/2888230,accepted @@ -32307,6 +32311,7 @@ Rhodanthe humboldtiana,Rhodanthe humboldtiana,species,accepted,APC,,Rhodanthe,As Helipterum laeve,Rhodanthe laevis,species,accepted,APC,,Rhodanthe,Asteraceae,Rhodanthe laevis,,"WA, NT, SA, Qld, NSW, Vic",native,Rhodanthe laevis (A.Gray) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2886359,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/118607,https://id.biodiversity.org.au/instance/apni/795188,nomenclatural synonym Rhodanthe laevis,Rhodanthe laevis,species,accepted,APC,,Rhodanthe,Asteraceae,Rhodanthe laevis,,"WA, NT, SA, Qld, NSW, Vic",native,Rhodanthe laevis (A.Gray) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2886359,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/118607,https://id.biodiversity.org.au/node/apni/2886359,accepted Rhodanthe manglesii,Rhodanthe manglesii,species,accepted,APC,,Rhodanthe,Asteraceae,Rhodanthe manglesii,,WA,native,Rhodanthe manglesii Lindl.,https://id.biodiversity.org.au/node/apni/8655662,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/68912,https://id.biodiversity.org.au/node/apni/8655662,accepted +Rhodanthe manglesii var. alba,Rhodanthe manglesii var. alba,variety,excluded,APC,,Rhodanthe,Asteraceae,Rhodanthe manglesii,Rhodanthe manglesii var. alba,,,,https://id.biodiversity.org.au/node/apni/2886453,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,,, Rhodanthe margarethae,Rhodanthe margarethae,species,accepted,APC,,Rhodanthe,Asteraceae,Rhodanthe margarethae,,WA,native,Rhodanthe margarethae (F.Muell.) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2918258,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/118650,https://id.biodiversity.org.au/node/apni/2918258,accepted Rhodanthe maryonii,Rhodanthe maryonii,species,accepted,APC,,Rhodanthe,Asteraceae,Rhodanthe maryonii,,WA,native,Rhodanthe maryonii (S.Moore) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2895470,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/118541,https://id.biodiversity.org.au/node/apni/2895470,accepted Helipterum microglossum,Rhodanthe microglossa,species,accepted,APC,,Rhodanthe,Asteraceae,Rhodanthe microglossa,,"NT, SA, Qld, NSW",native,Rhodanthe microglossa (Maiden & Betche) Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2918903,https://id.biodiversity.org.au/taxon/apni/51429193,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/118577,https://id.biodiversity.org.au/instance/apni/930728,nomenclatural synonym @@ -32689,6 +32694,7 @@ Santaloides brachyandrum,Rourea brachyandra,species,accepted,APC,,Rourea,Connara Roycea divaricata,Roycea divaricata,species,accepted,APC,,Roycea,Chenopodiaceae,Roycea divaricata,,WA,native,Roycea divaricata Paul G.Wilson,https://id.biodiversity.org.au/node/apni/2890193,https://id.biodiversity.org.au/node/apni/2889227,https://id.biodiversity.org.au/taxon/apni/51613011,https://id.biodiversity.org.au/name/apni/77709,https://id.biodiversity.org.au/node/apni/2890193,accepted Roycea pycnophylloides,Roycea pycnophylloides,species,accepted,APC,,Roycea,Chenopodiaceae,Roycea pycnophylloides,,WA,native,Roycea pycnophylloides C.A.Gardner,https://id.biodiversity.org.au/node/apni/2907137,https://id.biodiversity.org.au/node/apni/2889227,https://id.biodiversity.org.au/taxon/apni/51613011,https://id.biodiversity.org.au/name/apni/77718,https://id.biodiversity.org.au/node/apni/2907137,accepted Roycea spinescens,Roycea spinescens,species,accepted,APC,,Roycea,Chenopodiaceae,Roycea spinescens,,WA,native,Roycea spinescens C.A.Gardner,https://id.biodiversity.org.au/node/apni/2914631,https://id.biodiversity.org.au/node/apni/2889227,https://id.biodiversity.org.au/taxon/apni/51613011,https://id.biodiversity.org.au/name/apni/77745,https://id.biodiversity.org.au/node/apni/2914631,accepted +Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811),Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811),species,unplaced,APNI,,Rubiaceae,Rubiaceae,Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811),,,,Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811),,,https://id.biodiversity.org.au/taxon/apni/51446612,https://id.biodiversity.org.au/name/apni/228214,, Rubiaceae sp. [Williams_2012],Rubiaceae sp. [Williams_2012],family,family accepted,APC,,,Rubiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51446612,,, Rubus alceifolius,Rubus alceifolius,species,accepted,APC,,Rubus,Rosaceae,Rubus alceifolius,,Qld (naturalised),naturalised,Rubus alceifolius Poir.,https://id.biodiversity.org.au/node/apni/2918647,https://id.biodiversity.org.au/taxon/apni/51446575,https://id.biodiversity.org.au/taxon/apni/51737985,https://id.biodiversity.org.au/name/apni/84091,https://id.biodiversity.org.au/node/apni/2918647,accepted Rubus anglocandicans,Rubus anglocandicans,species,accepted,APC,,Rubus,Rosaceae,Rubus anglocandicans,,"WA (naturalised), SA (naturalised), Qld (naturalised), NSW (naturalised), NI (naturalised), ACT (naturalised), Vic (naturalised), Tas (naturalised)",naturalised,Rubus anglocandicans A.Newton,https://id.biodiversity.org.au/node/apni/2919192,https://id.biodiversity.org.au/taxon/apni/51446575,https://id.biodiversity.org.au/taxon/apni/51737985,https://id.biodiversity.org.au/name/apni/174670,https://id.biodiversity.org.au/node/apni/2919192,accepted @@ -35347,7 +35353,7 @@ Stellaria sp. B,Stellaria papillata,species,accepted,APC,,Stellaria,Caryophyllac Stellaria parviflora,Stellaria parviflora,species,accepted,APC,,Stellaria,Caryophyllaceae,Stellaria parviflora,,MI,native,Stellaria parviflora Banks & Sol. ex Hook.f.,https://id.biodiversity.org.au/node/apni/2911879,https://id.biodiversity.org.au/taxon/apni/51433015,https://id.biodiversity.org.au/taxon/apni/51432987,https://id.biodiversity.org.au/name/apni/132216,https://id.biodiversity.org.au/node/apni/2911879,accepted Stellaria pungens,Stellaria pungens,species,accepted,APC,,Stellaria,Caryophyllaceae,Stellaria pungens,,"SA, NSW, ACT, Vic, Tas",native,Stellaria pungens Brongn.,https://id.biodiversity.org.au/node/apni/2903553,https://id.biodiversity.org.au/taxon/apni/51433015,https://id.biodiversity.org.au/taxon/apni/51432987,https://id.biodiversity.org.au/name/apni/110761,https://id.biodiversity.org.au/node/apni/2903553,accepted Stellaria sp. [Angevin_2011],Stellaria sp. [Angevin_2011],genus,genus accepted,APC,,Stellaria,Caryophyllaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51433015,https://id.biodiversity.org.au/taxon/apni/51432987,,, -Stelligera sp. [White_2020],Stelligera sp. [White_2020],genus,genus unplaced by APC,APNI,,Stelligera,Chenopodiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51613011,,, +Stelligera sp. [White_2020],Stelligera sp. [White_2020],genus,unknown,APNI,,Stelligera,Chenopodiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51613011,,, Stemodia,Stemodia,genus,genus accepted,APC,,Stemodia,Plantaginaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51442291,https://id.biodiversity.org.au/taxon/apni/51699383,,, Stemodia anisata,Stemodia anisata,species,accepted,APC,,Stemodia,Plantaginaceae,Stemodia anisata,,Qld,native,Stemodia anisata A.R.Bean,https://id.biodiversity.org.au/taxon/apni/51442290,https://id.biodiversity.org.au/taxon/apni/51442291,https://id.biodiversity.org.au/taxon/apni/51699383,https://id.biodiversity.org.au/name/apni/51284957,https://id.biodiversity.org.au/taxon/apni/51442290,accepted Stemodia debilis,Stemodia debilis,species,accepted,APC,,Stemodia,Plantaginaceae,Stemodia debilis,,"WA, NT",native,Stemodia debilis Benth.,https://id.biodiversity.org.au/node/apni/2891051,https://id.biodiversity.org.au/taxon/apni/51442291,https://id.biodiversity.org.au/taxon/apni/51699383,https://id.biodiversity.org.au/name/apni/110912,https://id.biodiversity.org.au/node/apni/2891051,accepted @@ -35491,9 +35497,9 @@ Acianthella amplexicaulis,Stigmatodactylus amplexicaulis,species,accepted,APC,,S Acianthus amplexicaulis,Stigmatodactylus amplexicaulis,species,accepted,APC,,Stigmatodactylus,Orchidaceae,Stigmatodactylus amplexicaulis,,"Qld, NSW",native,"Stigmatodactylus amplexicaulis (F.M.Bailey) S.P.Lyon, M.A.Clem. & D.L.Jones",https://id.biodiversity.org.au/taxon/apni/51413285,https://id.biodiversity.org.au/taxon/apni/51413283,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/9021891,https://id.biodiversity.org.au/instance/apni/51413193,nomenclatural synonym Stigmatodactylus amplexicaulis,Stigmatodactylus amplexicaulis,species,accepted,APC,,Stigmatodactylus,Orchidaceae,Stigmatodactylus amplexicaulis,,"Qld, NSW",native,"Stigmatodactylus amplexicaulis (F.M.Bailey) S.P.Lyon, M.A.Clem. & D.L.Jones",https://id.biodiversity.org.au/taxon/apni/51413285,https://id.biodiversity.org.au/taxon/apni/51413283,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/9021891,https://id.biodiversity.org.au/taxon/apni/51413285,accepted Stigmatodactylus sublestus,Stigmatodactylus sublestus,species,accepted,APC,,Stigmatodactylus,Orchidaceae,Stigmatodactylus sublestus,,Qld,native,"Stigmatodactylus sublestus (Dockrill) S.P.Lyon, M.A.Clem. & D.L.Jones",https://id.biodiversity.org.au/taxon/apni/51413287,https://id.biodiversity.org.au/taxon/apni/51413283,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/9022816,https://id.biodiversity.org.au/taxon/apni/51413287,accepted -Stipa sp. [Firn_2019],Stipa sp. [Firn_2019],genus,genus unplaced by APC,APNI,,Stipa,Poaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51644646,,, -Stipa sp. [Fonseca_2000],Stipa sp. [Fonseca_2000],genus,genus unplaced by APC,APNI,,Stipa,Poaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51644646,,, -Stipa sp. [White_2020],Stipa sp. [White_2020],genus,genus unplaced by APC,APNI,,Stipa,Poaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51644646,,, +Stipa sp. [Firn_2019],Stipa sp. [Firn_2019],genus,unknown,APNI,,Stipa,Poaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51644646,,, +Stipa sp. [Fonseca_2000],Stipa sp. [Fonseca_2000],genus,unknown,APNI,,Stipa,Poaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51644646,,, +Stipa sp. [White_2020],Stipa sp. [White_2020],genus,unknown,APNI,,Stipa,Poaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51644646,,, Stirlingia,Stirlingia,genus,genus accepted,APC,,Stirlingia,Proteaceae,,,,,,,https://id.biodiversity.org.au/node/apni/2914974,https://id.biodiversity.org.au/taxon/apni/51732901,,, Stirlingia abrotanoides,Stirlingia abrotanoides,species,accepted,APC,,Stirlingia,Proteaceae,Stirlingia abrotanoides,,WA,native,Stirlingia abrotanoides Meisn.,https://id.biodiversity.org.au/node/apni/2919543,https://id.biodiversity.org.au/node/apni/2914974,https://id.biodiversity.org.au/taxon/apni/51732901,https://id.biodiversity.org.au/name/apni/83914,https://id.biodiversity.org.au/node/apni/2919543,accepted Stirlingia anethifolia,Stirlingia anethifolia,species,accepted,APC,,Stirlingia,Proteaceae,Stirlingia anethifolia,,WA,native,Stirlingia anethifolia (R.Br.) Endl.,https://id.biodiversity.org.au/node/apni/2909990,https://id.biodiversity.org.au/node/apni/2914974,https://id.biodiversity.org.au/taxon/apni/51732901,https://id.biodiversity.org.au/name/apni/83976,https://id.biodiversity.org.au/node/apni/2909990,accepted @@ -36475,6 +36481,7 @@ Taraxacum subbracteatum,Taraxacum subbracteatum,species,accepted,APC,,Taraxacum, Taraxacum subericinum,Taraxacum subericinum,species,accepted,APC,,Taraxacum,Asteraceae,Taraxacum subericinum,,Vic (naturalised),naturalised,"Taraxacum subericinum Hagend, Soest & Zevenb.",https://id.biodiversity.org.au/taxon/apni/51432466,https://id.biodiversity.org.au/taxon/apni/51432412,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/51432405,https://id.biodiversity.org.au/taxon/apni/51432466,accepted Taraxacum subhuelphersianum,Taraxacum subhuelphersianum,species,accepted,APC,,Taraxacum,Asteraceae,Taraxacum subhuelphersianum,,Vic (naturalised),naturalised,Taraxacum subhuelphersianum M.P.Christ.,https://id.biodiversity.org.au/taxon/apni/51432469,https://id.biodiversity.org.au/taxon/apni/51432412,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/51432407,https://id.biodiversity.org.au/taxon/apni/51432469,accepted Taraxis,Taraxis,genus,genus accepted,APC,,Taraxis,Restionaceae,,,,,,,https://id.biodiversity.org.au/node/apni/2913915,https://id.biodiversity.org.au/taxon/apni/51670858,,, +Pseudoloxocarya grossa MS,Taraxis grossa,species,accepted,APC,,Taraxis,Restionaceae,Taraxis grossa,,WA,native,Taraxis grossa B.G.Briggs & L.A.S.Johnson,https://id.biodiversity.org.au/node/apni/2910072,https://id.biodiversity.org.au/node/apni/2913915,https://id.biodiversity.org.au/taxon/apni/51670858,https://id.biodiversity.org.au/name/apni/154043,https://id.biodiversity.org.au/instance/apni/896452,taxonomic synonym Taraxis grossa,Taraxis grossa,species,accepted,APC,,Taraxis,Restionaceae,Taraxis grossa,,WA,native,Taraxis grossa B.G.Briggs & L.A.S.Johnson,https://id.biodiversity.org.au/node/apni/2910072,https://id.biodiversity.org.au/node/apni/2913915,https://id.biodiversity.org.au/taxon/apni/51670858,https://id.biodiversity.org.au/name/apni/154043,https://id.biodiversity.org.au/node/apni/2910072,accepted Cleome hassleriana,Tarenaya hassleriana,species,accepted,APC,,Tarenaya,Cleomaceae,Tarenaya hassleriana,,"Qld (naturalised), NSW (naturalised), Vic (formerly naturalised)",naturalised,Tarenaya hassleriana (Chodat) Iltis,https://id.biodiversity.org.au/node/apni/2908727,https://id.biodiversity.org.au/node/apni/2915616,https://id.biodiversity.org.au/taxon/apni/51459015,https://id.biodiversity.org.au/name/apni/226968,https://id.biodiversity.org.au/instance/apni/914609,nomenclatural synonym Tarenaya hassleriana,Tarenaya hassleriana,species,accepted,APC,,Tarenaya,Cleomaceae,Tarenaya hassleriana,,"Qld (naturalised), NSW (naturalised), Vic (formerly naturalised)",naturalised,Tarenaya hassleriana (Chodat) Iltis,https://id.biodiversity.org.au/node/apni/2908727,https://id.biodiversity.org.au/node/apni/2915616,https://id.biodiversity.org.au/taxon/apni/51459015,https://id.biodiversity.org.au/name/apni/226968,https://id.biodiversity.org.au/node/apni/2908727,accepted @@ -36980,7 +36987,7 @@ Tetrastigma petraeum,Tetrastigma petraeum,species,accepted,APC,,Tetrastigma,Vita Tetrastigma pisicarpum,Tetrastigma pisicarpum,species,accepted,APC,,Tetrastigma,Vitaceae,Tetrastigma pisicarpum,,Qld,native,Tetrastigma pisicarpum (Zipp. ex Miq.) Planch.,https://id.biodiversity.org.au/node/apni/2904822,https://id.biodiversity.org.au/node/apni/2917884,https://id.biodiversity.org.au/taxon/apni/51448758,https://id.biodiversity.org.au/name/apni/117202,https://id.biodiversity.org.au/node/apni/2904822,accepted Tetrastigma thorsborneorum,Tetrastigma thorsborneorum,species,accepted,APC,,Tetrastigma,Vitaceae,Tetrastigma thorsborneorum,,Qld,native,Tetrastigma thorsborneorum Jackes,https://id.biodiversity.org.au/node/apni/2910080,https://id.biodiversity.org.au/node/apni/2917884,https://id.biodiversity.org.au/taxon/apni/51448758,https://id.biodiversity.org.au/name/apni/117201,https://id.biodiversity.org.au/node/apni/2910080,accepted Tetrasynandra sp. (Mt Lewis BH 1053RFK),Tetrasynandra sp. (Mt Lewis BH 1053RFK),species,unplaced,APNI,,Tetrasynandra,Monimiaceae,Tetrasynandra sp. (Mt Lewis BH 1053RFK),,,,Tetrasynandra sp. (Mt Lewis BH 1053RFK),,,https://id.biodiversity.org.au/taxon/apni/51301176,https://id.biodiversity.org.au/name/apni/9997326,, -Tetrasynandra sp. [Tetrasynandra sp. aff.; Wright_2000],Tetrasynandra sp. [Tetrasynandra sp. aff.; Wright_2000],genus,genus unplaced by APC,APNI,,Tetrasynandra,Monimiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51301176,,, +Tetrasynandra sp. [Tetrasynandra sp. aff.; Wright_2000],Tetrasynandra sp. [Tetrasynandra sp. aff.; Wright_2000],genus,unknown,APNI,,Tetrasynandra,Monimiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51301176,,, Tetratheca,Tetratheca,genus,genus accepted,APC,,Tetratheca,Lauraceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51632281,https://id.biodiversity.org.au/taxon/apni/51438397,,, Tetratheca affinis,Tetratheca affinis,species,accepted,APC,,Tetratheca,Elaeocarpaceae,Tetratheca affinis,,WA,native,Tetratheca affinis Endl.,https://id.biodiversity.org.au/node/apni/2886479,https://id.biodiversity.org.au/taxon/apni/51632281,https://id.biodiversity.org.au/taxon/apni/51632282,https://id.biodiversity.org.au/name/apni/58534,https://id.biodiversity.org.au/node/apni/2886479,accepted Tetratheca sp. Mt Solus (F.Obbens 307/98),Tetratheca affinis,species,accepted,APC,,Tetratheca,Elaeocarpaceae,Tetratheca affinis,,WA,native,Tetratheca affinis Endl.,https://id.biodiversity.org.au/node/apni/2886479,https://id.biodiversity.org.au/taxon/apni/51632281,https://id.biodiversity.org.au/taxon/apni/51632282,https://id.biodiversity.org.au/name/apni/58534,https://id.biodiversity.org.au/instance/apni/897151,taxonomic synonym @@ -39567,7 +39574,7 @@ Bracteantha viscosa,Xerochrysum viscosum,species,accepted,APC,,Xerochrysum,Aster Helichrysum viscosum,Xerochrysum viscosum,species,accepted,APC,,Xerochrysum,Asteraceae,Xerochrysum viscosum,,"Qld, NSW, ACT, Vic, Tas (naturalised)",native and naturalised,Xerochrysum viscosum (Sieber ex DC.) R.J.Bayer,https://id.biodiversity.org.au/node/apni/2919836,https://id.biodiversity.org.au/taxon/apni/51432472,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/171917,https://id.biodiversity.org.au/instance/apni/952929,taxonomic synonym Xerochrysum viscosum,Xerochrysum viscosum,species,accepted,APC,,Xerochrysum,Asteraceae,Xerochrysum viscosum,,"Qld, NSW, ACT, Vic, Tas (naturalised)",native and naturalised,Xerochrysum viscosum (Sieber ex DC.) R.J.Bayer,https://id.biodiversity.org.au/node/apni/2919836,https://id.biodiversity.org.au/taxon/apni/51432472,https://id.biodiversity.org.au/taxon/apni/51695393,https://id.biodiversity.org.au/name/apni/171917,https://id.biodiversity.org.au/node/apni/2919836,accepted Xerolirion divaricata,Xerolirion divaricata,species,accepted,APC,,Xerolirion,Asparagaceae,Xerolirion divaricata,,WA,native,Xerolirion divaricata A.S.George,https://id.biodiversity.org.au/node/apni/2886765,https://id.biodiversity.org.au/node/apni/2893528,https://id.biodiversity.org.au/taxon/apni/51737651,https://id.biodiversity.org.au/name/apni/56425,https://id.biodiversity.org.au/node/apni/2886765,accepted -Xeromphis sp. [Cooper_2013],Xeromphis sp. [Cooper_2013],genus,genus unplaced by APC,APNI,,Xeromphis,Rubiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51446612,,, +Xeromphis sp. [Cooper_2013],Xeromphis sp. [Cooper_2013],genus,unknown,APNI,,Xeromphis,Rubiaceae,,,,,,,,https://id.biodiversity.org.au/taxon/apni/51446612,,, Xerothamnella herbacea,Xerothamnella herbacea,species,accepted,APC,,Xerothamnella,Acanthaceae,Xerothamnella herbacea,,Qld,native,Xerothamnella herbacea R.M.Barker,https://id.biodiversity.org.au/node/apni/2908833,https://id.biodiversity.org.au/node/apni/2913194,https://id.biodiversity.org.au/taxon/apni/51730724,https://id.biodiversity.org.au/name/apni/72400,https://id.biodiversity.org.au/node/apni/2908833,accepted Xerothamnella parvifolia,Xerothamnella parvifolia,species,accepted,APC,,Xerothamnella,Acanthaceae,Xerothamnella parvifolia,,"Qld, NSW",native,Xerothamnella parvifolia C.T.White,https://id.biodiversity.org.au/node/apni/2891701,https://id.biodiversity.org.au/node/apni/2913194,https://id.biodiversity.org.au/taxon/apni/51730724,https://id.biodiversity.org.au/name/apni/72407,https://id.biodiversity.org.au/node/apni/2891701,accepted Ximenia americana,Ximenia americana,species,accepted,APC,,Ximenia,Olacaceae,Ximenia americana,,Qld,native,Ximenia americana L.,https://id.biodiversity.org.au/taxon/apni/51429806,https://id.biodiversity.org.au/taxon/apni/51429807,https://id.biodiversity.org.au/taxon/apni/51429808,https://id.biodiversity.org.au/name/apni/72438,https://id.biodiversity.org.au/taxon/apni/51429806,accepted @@ -39846,9 +39853,10 @@ Zygophyllum sp. [Fonseca_2000],Zygophyllum sp. [Fonseca_2000],genus,genus accept Zygophyllum sp. [White_2020],Zygophyllum sp. [White_2020],genus,genus accepted,APC,,Zygophyllum,Nitrariaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51448995,https://id.biodiversity.org.au/node/apni/7724927,,, Zygophyllum sp. [Zygophyllum aff. ammophilum; White_2020],Zygophyllum sp. [Zygophyllum aff. ammophilum; White_2020],genus,genus accepted,APC,,Zygophyllum,Nitrariaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51448995,https://id.biodiversity.org.au/node/apni/7724927,,, Zygophyllum sp. [Zygophyllum aurantiacum/eremaeum; White_2020],Zygophyllum sp. [Zygophyllum aurantiacum/eremaeum; White_2020],genus,genus accepted,APC,,Zygophyllum,Nitrariaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51448995,https://id.biodiversity.org.au/node/apni/7724927,,, -x Calassodia [X Calassodia sp. nov. (Cyanicula caerulea hybrid); White_2020],x Calassodia [X Calassodia sp. nov. (Cyanicula caerulea hybrid); White_2020],genus,genus accepted,APC,,x Calassodia,Orchidaceae,,,,,,,https://id.biodiversity.org.au/taxon/apni/51428698,https://id.biodiversity.org.au/taxon/apni/51727417,,, -x Cyanthera glossodioides,x Cyanthera glossodioides,species,accepted,APC,,x Cyanthera,Orchidaceae,x Cyanthera glossodioides,,WA,native,x Cyanthera glossodioides Hopper & A.P.Br.,https://id.biodiversity.org.au/taxon/apni/51401171,https://id.biodiversity.org.au/taxon/apni/51401169,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/188978,https://id.biodiversity.org.au/instance/apni/51401167,taxonomic synonym -x Cynochloris macivorii,x Cynochloris macivorii,species,accepted,APC,,x Cynochloris,Poaceae,x Cynochloris macivorii,,Qld,native,x Cynochloris macivorii Clifford & Everist,https://id.biodiversity.org.au/node/apni/2910939,https://id.biodiversity.org.au/node/apni/2889702,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/94379,https://id.biodiversity.org.au/node/apni/2910939,accepted -x Cynochloris reynoldensis,x Cynochloris reynoldensis,species,accepted,APC,,x Cynochloris,Poaceae,x Cynochloris reynoldensis,,Qld,native,x Cynochloris reynoldensis B.K.Simon,https://id.biodiversity.org.au/node/apni/2888748,https://id.biodiversity.org.au/node/apni/2889702,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/94387,https://id.biodiversity.org.au/node/apni/2888748,accepted -Glossodia x tutelata,x Phelodia tutelata,species,accepted,APC,,x Phelodia,Orchidaceae,x Phelodia tutelata,,"SA, Vic, Tas",native,x Phelodia tutelata (R.S.Rogers) Kellermann,https://id.biodiversity.org.au/taxon/apni/51428714,https://id.biodiversity.org.au/taxon/apni/51428698,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/51421464,https://id.biodiversity.org.au/instance/apni/51428705,taxonomic synonym -x Phelodia tutelata,x Phelodia tutelata,species,accepted,APC,,x Phelodia,Orchidaceae,x Phelodia tutelata,,"SA, Vic, Tas",native,x Phelodia tutelata (R.S.Rogers) Kellermann,https://id.biodiversity.org.au/taxon/apni/51428714,https://id.biodiversity.org.au/taxon/apni/51428698,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/51421464,https://id.biodiversity.org.au/taxon/apni/51428714,accepted +x Cyanthera glossodioides,x Cyanthera glossodioides,species,accepted,APC,,x Cyanthera,Orchidaceae,x Cyanthera glossodioides,,WA,native,x Cyanthera glossodioides Hopper & A.P.Br.,https://id.biodiversity.org.au/taxon/apni/51401171,,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/188978,https://id.biodiversity.org.au/instance/apni/51401167,taxonomic synonym +x Cynochloris macivorii,x Cynochloris macivorii,species,accepted,APC,,x Cynochloris,Poaceae,x Cynochloris macivorii,,Qld,native,x Cynochloris macivorii Clifford & Everist,https://id.biodiversity.org.au/node/apni/2910939,,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/94379,https://id.biodiversity.org.au/node/apni/2910939,accepted +x Cynochloris reynoldensis,x Cynochloris reynoldensis,species,accepted,APC,,x Cynochloris,Poaceae,x Cynochloris reynoldensis,,Qld,native,x Cynochloris reynoldensis B.K.Simon,https://id.biodiversity.org.au/node/apni/2888748,,https://id.biodiversity.org.au/taxon/apni/51644646,https://id.biodiversity.org.au/name/apni/94387,https://id.biodiversity.org.au/node/apni/2888748,accepted +x Phelodia sp. [X Calassodia sp. nov. (Cyanicula caerulea hybrid); White_2020],x Phelodia sp. [X Calassodia sp. nov. (Cyanicula caerulea hybrid); White_2020],genus,unknown,APC,,x Phelodia,,,,,,,,,,,, +Glossodia x tutelata,x Phelodia tutelata,species,accepted,APC,,x Phelodia,Orchidaceae,x Phelodia tutelata,,"SA, Vic, Tas",native,x Phelodia tutelata (R.S.Rogers) Kellermann,https://id.biodiversity.org.au/taxon/apni/51428714,,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/51421464,https://id.biodiversity.org.au/instance/apni/51428705,taxonomic synonym +x Glossadenia tutelata,x Phelodia tutelata,species,accepted,APC,,x Phelodia,Orchidaceae,x Phelodia tutelata,,"SA, Vic, Tas",native,x Phelodia tutelata (R.S.Rogers) Kellermann,https://id.biodiversity.org.au/taxon/apni/51428714,,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/51421464,https://id.biodiversity.org.au/instance/apni/51428702,nomenclatural synonym +x Phelodia tutelata,x Phelodia tutelata,species,accepted,APC,,x Phelodia,Orchidaceae,x Phelodia tutelata,,"SA, Vic, Tas",native,x Phelodia tutelata (R.S.Rogers) Kellermann,https://id.biodiversity.org.au/taxon/apni/51428714,,https://id.biodiversity.org.au/taxon/apni/51727417,https://id.biodiversity.org.au/name/apni/51421464,https://id.biodiversity.org.au/taxon/apni/51428714,accepted diff --git a/data/ABRS_1981/metadata.yml b/data/ABRS_1981/metadata.yml index 0f6ece888..d8951783c 100644 --- a/data/ABRS_1981/metadata.yml +++ b/data/ABRS_1981/metadata.yml @@ -28,7 +28,7 @@ dataset: units = ifelse(units %in% c("m", "cm"), "mm", units), value = as.character(value) ); - + data_categorical_other <- data %>% filter(is.na(units) & !(trait %in% c("longevity", "flowering time start", "flowering time end")) ) %>% @@ -44,14 +44,14 @@ dataset: left_join(filter(data, trait == "flowering time start") %>% select(species_name, i), by = "species_name"); - data_longevity <- data %>% + data_longevity <- data %>% filter( !is.na(value) & trait == "longevity") %>% mutate(trait = "leaf_phenology", value = ifelse(value %in% c("EP", "E", "EAP", "EPB", "EB", "EAB", "EA"), "evergreen", value), value = ifelse(value %in% c("DP", "D", "DPB"), "deciduous", value)) %>% filter(value %in% c("evergreen", "deciduous")); - - data_lifehistory <- data %>% + + data_lifehistory <- data %>% filter( !is.na(value) & trait == "longevity" & value %in% c("EP", "P", "DP", "EDP", "A", "EA", "EB", "B","AB", "EAB", "AP", "EAP", "EPB", "DPB", "PB")) %>% mutate(trait = "life_history", value = ifelse(value %in% c("EP", "P", "DP", "EDP"), "perennial", value), @@ -70,7 +70,7 @@ dataset: value == "HA" ~ "aquatic") ); - bind_rows(data_numeric, data_categorical_other, data_flowering, + bind_rows(data_numeric, data_categorical_other, data_flowering, data_longevity, data_lifehistory, data_substrate) %>% arrange(i) %>% select(-i) %>% @@ -87,7 +87,7 @@ dataset: group_by(species_name, trait) %>% distinct(value, .keep_all = TRUE) %>% ungroup() - ' + ' collection_date: unknown/2015 taxon_name: species_name trait_name: trait @@ -517,8 +517,5 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -exclude_observations: -- variable: taxon_name - find: Platanus x hispanica 'Acerifolia' - reason: excluding cultivars +exclude_observations: .na questions: .na diff --git a/data/ABRS_2022/data.csv b/data/ABRS_2022/data.csv index b9ca15187..5e9e65b26 100644 --- a/data/ABRS_2022/data.csv +++ b/data/ABRS_2022/data.csv @@ -12250,7 +12250,7 @@ Opuntia,Opuntia microdasys," spreading shrub to 1 m high, often somewhat creepin Opuntia,Opuntia polyacantha var. hystricina, ,perennial,inferred_from_family,,,shrub,inferred_from_species,,,,,,,woody, Opuntia,Opuntia," succulent, erect or spreading shrubs or trees, sometimes creeping, often many-branched from the base; ",perennial,inferred_from_family,,,shrub tree,shrubs trees,,,,,erect creeping spreading,erect creeping spreading,woody, Opuntia,Opuntia leucotricha," erect shrub 3-4 m high, to 4 m diam., trunk well-developed, to 1 m high and 15-30 cm wide in older plants. ",perennial,inferred_from_family,,,shrub,shrub,,,,,erect,erect,woody, -Opuntia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt, ,perennial,inferred_from_family,,,herb,inferred_from_life_history,,,,,,,herbaceous, +Opuntia,Opuntia polyacantha var. erinacea (Engelm . & J.M.Bigelow) B.D.Parfitt, ,perennial,inferred_from_family,,,herb,inferred_from_life_history,,,,,,,herbaceous, Opuntia,Opuntia tomentosa," erect shrub or treelike, to 8 m high. ",perennial,inferred_from_family,,,shrub palmoid,shrub treelike,,,,,erect,erect,woody, Opuntia,Opuntia ficus-indica," erect shrub to 5 m high and 8 m wide, older plants with well-developed trunk to 1.2 m high and 1 m diam. ",perennial,inferred_from_family,,,shrub,shrub,,,,,erect,erect,woody, Oraniopsis,Oraniopsis," solitary, erect, dioecious palm. ",perennial,inferred_from_growth_form,,,palmoid,palm,,,dioecious,dioecious,erect,erect,woody,inferred_from_growth_form diff --git a/data/ABRS_2022/metadata.yml b/data/ABRS_2022/metadata.yml index a4cc92c63..a0f0ad2cb 100644 --- a/data/ABRS_2022/metadata.yml +++ b/data/ABRS_2022/metadata.yml @@ -24,9 +24,9 @@ dataset: data %>% filter(str_detect(taxon_name, " ")) %>% mutate( - woodiness_a = stringr::str_replace(woodiness_a, "soft_wood","semi_woody") + woodiness_a = stringr::str_replace(woodiness_a, "soft_wood", "semi_woody") ) - ' + ' collection_date: unknown/2022 taxon_name: taxon_name description: Plant growth form data extracted from the Flora of Australia online @@ -139,10 +139,6 @@ taxonomic_updates: replace: Aristida ramosa x Aristida vagans reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Blechnum pennamarina subsp. alpina - replace: Blechnum penna-marina subsp. alpina - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies - find: Brassica juncea replace: Brassica x juncea reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -173,10 +169,6 @@ taxonomic_updates: reason: match_05. Automatic alignment with scientific name in APC accepted list (2022-11-22) taxonomic_resolution: species -- find: Crepidomanes aphleboides - replace: Crepidomanes aphlebioides - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Dactyliophora novaeguineae replace: Dactyliophora novae-guineae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -327,10 +319,6 @@ taxonomic_updates: replace: Lindsaea terrae-reginae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Marsdenia hemi-ptera - replace: Marsdenia hemiptera - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Melicytus novae-zelandae subsp. centurionis replace: Melicytus novae-zelandiae subsp. centurionis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -339,15 +327,6 @@ taxonomic_updates: replace: Mesua sp. (Boonjee) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Monimiaceae Q3 (Mt. Hemmant) - replace: Monimiaceae Q3 (Mt. Hemmant) sp. Q1 (Mt. Hemmant) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Myrsine maccomishii - replace: Myrsine mccomishii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Neoalsomitra sp. A ( B.Hyland 10923) replace: Neoalsomitra sp. A (B.Hyland 10923) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) @@ -356,12 +335,7 @@ taxonomic_updates: replace: Oligochaetochilus macrocalymma reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt - replace: Opuntia polyacantha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt +- find: Opuntia polyacantha var. erinacea (Engelm . & J.M.Bigelow) B.D.Parfitt replace: Opuntia polyacantha reason: Exact match of the first two words of the taxon name to an APC-accepted canonical name (2023-11-02) @@ -401,10 +375,6 @@ taxonomic_updates: replace: Pterostylis x ralphcranei reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811) - replace: Gynochthodes retropila - reason: Manual alignment with APC accepted name (E. Wenk, 2023-06-16) - taxonomic_resolution: species - find: Salvinia molesta replace: Salvinia x molesta reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -481,21 +451,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: x Cynochloris macivorii - replace: x Cynochloris macivorii - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-22) - taxonomic_resolution: species -- find: x Cynochloris reynoldensis - replace: x Cynochloris reynoldensis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-22) - taxonomic_resolution: species -- find: x Glossadenia x tutelata - replace: Glossodia x tutelata - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: species - find: xCyanthera glossodioides replace: x Cyanthera glossodioides reason: Manual alignment with canonical species name in APC (E. Wenk, 2023-11-02) @@ -505,28 +460,11 @@ taxonomic_updates: reason: Manual alignment with canonical species name in APC (E. Wenk, 2023-11-02) taxonomic_resolution: species exclude_observations: -- variable: taxon_name - find: Acacioides Group, Adenotricha Group, Aethiopicum Group, Agrifolia Group, Aspera - Group, Bulbiferum Group, Buxifolia Group, Capitisyork Group, Ceratophylla Group, - Cirsiifolia Group, Clavata Group, Cristata Group, Cucullata Group, Eriantha Group, - Eryngioides Group, Goodii Group, Hakeoides Group, Heliosperma Group, Hilliana - Group, Huegelii Group, Incrassata Group, Integrifolia Group, Linearifolia Group, - Linearis Group, Lissocarpha Group, Longistyla Group, Lorea Group, Marriottii Group, - Megalosperma Group, Microcarpa Group, Multilineata Group, Nodosa Group, Obliqua - Group, Obtusatum Group, Oncogyne Group, Parvum Group, Petiolaris Group, Petrophiloides - Group, Polyodon Group, Pteridifolia Group, Pythara Group, Quercifolia Group, Robusta - Group, Rudis Group, Ruscifolia Group, Salicifolia Group, Shiressii Group, Simplicifrons - Group, Strumosa Group, Thelemanniana Group, Trifida Group, Trifurcata Group, Triloba - Group, Trineura Group, Ulicina Group, Undulata Group, Wickhamii Group - reason: not species in APC/APNI -- variable: taxon_name - find: Platanus xhispanica 'Acerifolia' - reason: excluding cultivars - variable: taxon_name find: Asplenium lobulatum Mett. ex Kuhn, Cerastium pyrenaicum J.Gay, Passiflora miniata, Quercus ilex, Selenicereus undatus, Silene gracilis DC. reason: excluding non-native, non-naturalised species - variable: taxon_name - find: Anacolosa sp., x Cynochloris, Sphaerocionium + find: Anacolosa sp., x Cynochloris reason: excluding genera questions: .na diff --git a/data/ABRS_2023/data.csv b/data/ABRS_2023/data.csv index 60f90005f..9ce75e798 100644 --- a/data/ABRS_2023/data.csv +++ b/data/ABRS_2023/data.csv @@ -8878,7 +8878,7 @@ Flora_of_Australia,Opuntia microdasys,fruit_dehiscence,,indehiscent,inferred_fro Flora_of_Australia,Opuntia monacantha,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode Flora_of_Australia,Opuntia polyacantha,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode Flora_of_Australia,Opuntia polyacantha var. hystricina,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode -Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode +Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode Flora_of_Australia,Opuntia puberula,fruit_dehiscence,,dehiscent,splitting,,mode Flora_of_Australia,Opuntia robusta,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode Flora_of_Australia,Opuntia schickendantzii,fruit_dehiscence,,indehiscent,inferred_from_genus,,mode @@ -43769,7 +43769,7 @@ Flora_of_Australia,Opuntia microdasys,leaf_arrangement,,spiral,inferred_from_fam Flora_of_Australia,Opuntia monacantha,leaf_arrangement,,spiral,inferred_from_family,,mode Flora_of_Australia,Opuntia polyacantha,leaf_arrangement,,spiral,inferred_from_family,,mode Flora_of_Australia,Opuntia polyacantha var. hystricina,leaf_arrangement,,spiral,inferred_from_family,,mode -Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,leaf_arrangement,,spiral,inferred_from_family,,mode +Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,leaf_arrangement,,spiral,inferred_from_family,,mode Flora_of_Australia,Opuntia puberula,leaf_arrangement,,spiral,inferred_from_family,,mode Flora_of_Australia,Opuntia robusta,leaf_arrangement,,spiral,inferred_from_family,,mode Flora_of_Australia,Opuntia schickendantzii,leaf_arrangement,,spiral,inferred_from_family,,mode @@ -54404,7 +54404,7 @@ Flora_of_Australia,Opuntia microdasys,leaf_compoundness,,simple,inferred_from_fa Flora_of_Australia,Opuntia monacantha,leaf_compoundness,,simple,inferred_from_family,,mode Flora_of_Australia,Opuntia polyacantha,leaf_compoundness,,simple,inferred_from_family,,mode Flora_of_Australia,Opuntia polyacantha var. hystricina,leaf_compoundness,,simple,inferred_from_family,,mode -Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,leaf_compoundness,,simple,inferred_from_family,,mode +Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,leaf_compoundness,,simple,inferred_from_family,,mode Flora_of_Australia,Opuntia puberula,leaf_compoundness,,simple,inferred_from_family,,mode Flora_of_Australia,Opuntia robusta,leaf_compoundness,,simple,inferred_from_family,,mode Flora_of_Australia,Opuntia schickendantzii,leaf_compoundness,,simple,inferred_from_family,,mode @@ -89520,7 +89520,7 @@ Flora_of_Australia,Opuntia microdasys,leaf_margin,,entire,inferred_from_family,, Flora_of_Australia,Opuntia monacantha,leaf_margin,,entire,inferred_from_family,,mode Flora_of_Australia,Opuntia polyacantha,leaf_margin,,entire,inferred_from_family,,mode Flora_of_Australia,Opuntia polyacantha var. hystricina,leaf_margin,,entire,inferred_from_family,,mode -Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,leaf_margin,,entire,inferred_from_family,,mode +Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,leaf_margin,,entire,inferred_from_family,,mode Flora_of_Australia,Opuntia puberula,leaf_margin,,entire,inferred_from_family,,mode Flora_of_Australia,Opuntia robusta,leaf_margin,,entire,inferred_from_family,,mode Flora_of_Australia,Opuntia schickendantzii,leaf_margin,,entire,inferred_from_family,,mode @@ -189437,7 +189437,7 @@ Flora_of_Australia,Opuntia microdasys,plant_photosynthetic_organ,,cladode,manual Flora_of_Australia,Opuntia monacantha,plant_photosynthetic_organ,,cladode,manual,,mode Flora_of_Australia,Opuntia polyacantha,plant_photosynthetic_organ,,cladode,manual,,mode Flora_of_Australia,Opuntia polyacantha var. hystricina,plant_photosynthetic_organ,,cladode,manual,,mode -Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,plant_photosynthetic_organ,,cladode,manual,,mode +Flora_of_Australia,Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt,plant_photosynthetic_organ,,cladode,manual,,mode Flora_of_Australia,Opuntia puberula,plant_photosynthetic_organ,,cladode,manual,,mode Flora_of_Australia,Opuntia robusta,plant_photosynthetic_organ,,cladode,manual,,mode Flora_of_Australia,Opuntia schickendantzii,plant_photosynthetic_organ,,cladode,manual,,mode diff --git a/data/ABRS_2023/metadata.yml b/data/ABRS_2023/metadata.yml index ea26ab748..9e18d7e27 100644 --- a/data/ABRS_2023/metadata.yml +++ b/data/ABRS_2023/metadata.yml @@ -53,7 +53,7 @@ dataset: entity_measured = ifelse(category %in% c("submerged_leaf", "submerged_lamina", "submerged_leaves","submerged_leaves_blade", "submerged_blade"), "submerged_leaf", entity_measured), entity_measured = ifelse(category %in% c("sterile_leaf", "sterile_lamina", "sterile_fronds", "sterile_leaves"), "sterile_leaf", entity_measured), entity_measured = ifelse(category %in% c("fertile_leaf", "fertile_fronds", "fertile_lamina", "fertile_frond", "fertile_leaves"), "fertile_leaf", entity_measured), - entity_measured = ifelse(category %in% c("leaflets", "trifoliate_leaves", "laminae", "leaflet", "lateral_leaflets", "terminal_leaflets", "simple_leaves_and_leaflets", "terminal_leaflets_simple_leaves", "leaves_simple_leaflets", "leafletlamina", "terminal_leaflet", "lateral_leaflet" , "basal_leaflets", "sterile_leaflets", "fertile_leaflets", "upper_leaflets", "lower_leaflets", "segmented_leaves", "floating_leaflets", "primary_leaflets", "secondary_leaflets", "submerged_leaflets"), "leaflet", entity_measured), + entity_measured = ifelse(category %in% c("leaflets", "trifoliate_leaves", "laminae", "leaflet", "lateral_leaflets", "terminal_leaflets", "simple_leaves_and_leaflets", "terminal_leaflets_simple_leaves", "leaves_simple_leaflets", "leafletlamina", "terminal_leaflet", "lateral_leaflet" , "basal_leaflets", "sterile_leaflets", "fertile_leaflets", "upper_leaflets", "lower_leaflets", "segmented_leaves", "floating_leaflets", "primary_leaflets", "secondary_leaflets", "submerged_leaflets"), "leaflet", entity_measured), entity_measured = ifelse(category %in% c( "pinnule", "pinnules", "secondary_pinnae", "longest_secondary_pinnae"), "secondary_pinnae", entity_measured), entity_measured = ifelse(category %in% c("tertiary_pinnae"), "tertiary_pinnae", entity_measured), entity_measured = ifelse(category %in% c("quaternary_pinnae"), "quaternary_pinnae", entity_measured), @@ -89,7 +89,7 @@ dataset: group_by(taxon_name, trait_name, entity_measured, value_type) %>% mutate(observation_number = row_number()) %>% ungroup() - ' + ' collection_date: unknown/2022 taxon_name: taxon_name trait_name: trait_name @@ -537,10 +537,6 @@ taxonomic_updates: replace: Banksia penicillata reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Blechnum pennamarina subsp. alpina - replace: Blechnum penna-marina subsp. alpina - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies - find: Brassica juncea replace: Brassica x juncea reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -571,10 +567,6 @@ taxonomic_updates: reason: match_05. Automatic alignment with scientific name in APC accepted list (2022-11-22) taxonomic_resolution: species -- find: Crepidomanes aphleboides - replace: Crepidomanes aphlebioides - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Dactyliophora novaeguineae replace: Dactyliophora novae-guineae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -749,10 +741,6 @@ taxonomic_updates: replace: Lindsaea terrae-reginae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Marsdenia hemi-ptera - replace: Marsdenia hemiptera - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Melicytus novae-zelandae subsp. centurionis replace: Melicytus novae-zelandiae subsp. centurionis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -761,15 +749,6 @@ taxonomic_updates: replace: Mesua sp. (Boonjee) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Monimiaceae Q3 (Mt. Hemmant) - replace: Monimiaceae Q3 (Mt. Hemmant) sp. Q1 (Mt. Hemmant) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Myrsine maccomishii - replace: Myrsine mccomishii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Neoalsomitra sp. A ( B.Hyland 10923) replace: Neoalsomitra sp. A (B.Hyland 10923) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) @@ -779,25 +758,10 @@ taxonomic_updates: reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) taxonomic_resolution: species - find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt - replace: Opuntia polyacantha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt - replace: Opuntia polyacantha - reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name - in `APC accepted` when everything except first 2 words ignored (2023-05-24) - taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt replace: Opuntia polyacantha reason: Exact match of the first two words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt - replace: Opuntia polyacantha - reason: Fuzzy match of the first two words of the taxon name to an APC-accepted - canonical name (2023-11-02) - taxonomic_resolution: species - find: Osteocarpum scleropterum replace: Osteocarpum x scleropterum reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -837,10 +801,6 @@ taxonomic_updates: replace: Pterostylis x ralphcranei reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811) - replace: Gynochthodes retropila - reason: Manual alignment with APC accepted name (E. Wenk, 2023-06-16) - taxonomic_resolution: species - find: Salvinia molesta replace: Salvinia x molesta reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -935,11 +895,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-22) taxonomic_resolution: species -- find: x Glossadenia x tutelata - replace: Glossodia x tutelata - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: species - find: xCyanthera glossodioides replace: x Cyanthera glossodioides reason: Manual alignment with canonical species name in APC (E. Wenk, 2023-11-02) @@ -950,24 +905,7 @@ taxonomic_updates: taxonomic_resolution: species exclude_observations: - variable: taxon_name - find: Acacioides Group, Adenotricha Group, Aethiopicum Group, Agrifolia Group, Aspera - Group, Bulbiferum Group, Buxifolia Group, Capitisyork Group, Ceratophylla Group, - Cirsiifolia Group, Clavata Group, Cristata Group, Cucullata Group, Eriantha Group, - Eryngioides Group, Goodii Group, Hakeoides Group, Heliosperma Group, Hilliana - Group, Huegelii Group, Incrassata Group, Integrifolia Group, Linearifolia Group, - Linearis Group, Lissocarpha Group, Longistyla Group, Lorea Group, Marriottii Group, - Megalosperma Group, Microcarpa Group, Multilineata Group, Nodosa Group, Obliqua - Group, Obtusatum Group, Oncogyne Group, Parvum Group, Petiolaris Group, Petrophiloides - Group, Polyodon Group, Pteridifolia Group, Pythara Group, Quercifolia Group, Robusta - Group, Rudis Group, Ruscifolia Group, Salicifolia Group, Shiressii Group, Simplicifrons - Group, Strumosa Group, Thelemanniana Group, Trifida Group, Trifurcata Group, Triloba - Group, Trineura Group, Ulicina Group, Undulata Group, Wickhamii Group - reason: not species in APC/APNI -- variable: taxon_name - find: Platanus xhispanica 'Acerifolia' - reason: excluding cultivars -- variable: taxon_name - find: Anacolosa, Anacolosa sp., Sphaerocionium, x Cynochloris + find: Anacolosa sp., x Cynochloris reason: excluding genera - variable: taxon_name find: Asplenium lobulatum Mett. ex Kuhn, Cerastium pyrenaicum J.Gay, Passiflora miniata, Quercus ilex, diff --git a/data/ANBG_2019/metadata.yml b/data/ANBG_2019/metadata.yml index e3acdf582..59654aa16 100644 --- a/data/ANBG_2019/metadata.yml +++ b/data/ANBG_2019/metadata.yml @@ -32,7 +32,7 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: yes - custom_R_code: ' + custom_R_code: ' data %>% mutate( weird_date = ifelse(str_detect(gathering_date, "^[0-9]{4}"), gathering_date, NA), @@ -13498,545 +13498,182 @@ traits: from those of the dispersal unit as it is first released from the plant (especially in the case of fleshy fruits). substitutions: -- trait_name: seed_germination_treatment - find: soak the seed for a time period. - replace: .na -- trait_name: seed_surface_texture - find: finely textured - replace: .na -- trait_name: seed_surface_texture - find: multi-faceted - replace: .na -- trait_name: seed_surface_texture - find: tuberculate - replace: bumpy -- trait_name: seed_surface_texture - find: undulate - replace: bumpy -- trait_name: seed_surface_texture - find: papillate - replace: bumpy -- trait_name: seed_surface_texture - find: papillose - replace: bumpy -- trait_name: seed_surface_texture - find: micronate-tubercular - replace: bumpy -- trait_name: seed_surface_texture - find: reticulate - replace: netted -- trait_name: seed_surface_texture - find: shallowly reticulate - replace: netted -- trait_name: seed_surface_texture - find: acutely reticulate - replace: netted -- trait_name: seed_surface_texture - find: shalllowly reticulate - replace: netted -- trait_name: seed_surface_texture - find: deeply reticulate - replace: netted -- trait_name: seed_surface_texture - find: shalllowly reticulate striate - replace: netted ribbed -- trait_name: seed_surface_texture - find: reticulate striate - replace: netted ribbed -- trait_name: seed_surface_texture - find: chartaceous - replace: papery -- trait_name: seed_surface_texture - find: stellate dimpled - replace: pitted -- trait_name: seed_surface_texture - find: dimpled - replace: pitted -- trait_name: seed_surface_texture - find: shallowly pitted - replace: pitted -- trait_name: seed_surface_texture - find: pitted papillose - replace: pitted bumpy -- trait_name: seed_surface_texture - find: dimpled rough - replace: pitted rough -- trait_name: seed_surface_texture - find: shallowly costate - replace: ribbed -- trait_name: seed_surface_texture - find: costate - replace: ribbed -- trait_name: seed_surface_texture - find: costate finely textured - replace: ribbed -- trait_name: seed_surface_texture - find: striate - replace: ribbed -- trait_name: seed_surface_texture - find: lineolate - replace: ribbed -- trait_name: seed_surface_texture - find: scalar - replace: ribbed -- trait_name: seed_surface_texture - find: raised edge - replace: ribbed -- trait_name: seed_surface_texture - find: fluted - replace: ribbed -- trait_name: seed_surface_texture - find: costate tomentose - replace: ribbed -- trait_name: seed_surface_texture - find: costate papillose - replace: ribbed bumpy -- trait_name: seed_surface_texture - find: ribbed chartaceous - replace: ribbed papery -- trait_name: seed_surface_texture - find: costate smooth - replace: ribbed smooth -- trait_name: seed_surface_texture - find: scabrous - replace: rough -- trait_name: seed_surface_texture - find: very rough - replace: rough -- trait_name: seed_surface_texture - find: undulate rough - replace: rough bumpy -- trait_name: seed_surface_texture - find: smooth finely reticuate - replace: smooth netted -- trait_name: seed_surface_texture - find: smooth scabrous - replace: smooth rough -- trait_name: seed_surface_texture - find: smooth rugose - replace: smooth wrinkled -- trait_name: seed_surface_texture - find: smooth undulate rugose - replace: smooth wrinkled bumpy -- trait_name: seed_surface_texture - find: shallowly rugose - replace: wrinkled -- trait_name: seed_surface_texture - find: slightly rugose - replace: wrinkled -- trait_name: seed_surface_texture - find: rugose - replace: wrinkled -- trait_name: seed_surface_texture - find: finely rugose - replace: wrinkled -- trait_name: seed_surface_texture - find: rugose occasionally tuberculate - replace: wrinkled -- trait_name: seed_surface_texture - find: deeply rugose - replace: wrinkled -- trait_name: seed_surface_texture - find: rugose finely textured - replace: wrinkled -- trait_name: seed_surface_texture - find: rugose tuberculate - replace: wrinkled bumpy -- trait_name: seed_surface_texture - find: rugose papillose - replace: wrinkled bumpy -- trait_name: seed_surface_texture - find: rugose shallowly reticulate - replace: wrinkled netted -- trait_name: seed_surface_texture - find: rugose striate - replace: wrinkled ribbed -- trait_name: seed_surface_texture - find: rugose smooth - replace: wrinkled smooth -- trait_name: seed_surface_hairs - find: plumose - replace: hairs_branched -- trait_name: seed_surface_hairs - find: tomentose - replace: hairs_simple -- trait_name: seed_surface_hairs - find: stellate dimpled - replace: hairs_branched -- trait_name: seed_surface_hairs - find: hairs - replace: hairs -- trait_name: seed_surface_hairs - find: costate tomentose - replace: hairs_simple -- trait_name: seed_surface_hairs - find: ciliate - replace: hairs_simple -- trait_name: seed_surface_hairs - find: stellate - replace: hairs_branched -- trait_name: seed_surface_hairs - find: cilliate - replace: hairs_simple -- trait_name: seed_surface_hairs - find: velutinous - replace: hairs_simple -- trait_name: seed_surface_texture - find: finely textured - replace: .na -- trait_name: seed_surface_texture - find: multi-faceted - replace: .na -- trait_name: seed_surface_texture - find: tuberculate - replace: bumpy -- trait_name: seed_surface_texture - find: undulate - replace: bumpy -- trait_name: seed_surface_texture - find: papillate - replace: bumpy -- trait_name: seed_surface_texture - find: papillose - replace: bumpy -- trait_name: seed_surface_texture - find: micronate-tubercular - replace: bumpy -- trait_name: seed_surface_texture - find: reticulate - replace: netted -- trait_name: seed_surface_texture - find: shallowly reticulate - replace: netted -- trait_name: seed_surface_texture - find: acutely reticulate - replace: netted -- trait_name: seed_surface_texture - find: shalllowly reticulate - replace: netted -- trait_name: seed_surface_texture - find: deeply reticulate - replace: netted -- trait_name: seed_surface_texture - find: shalllowly reticulate striate - replace: netted ribbed -- trait_name: seed_surface_texture - find: reticulate striate - replace: netted ribbed -- trait_name: seed_surface_texture - find: chartaceous - replace: papery -- trait_name: seed_surface_texture - find: stellate dimpled - replace: pitted -- trait_name: seed_surface_texture - find: dimpled - replace: pitted -- trait_name: seed_surface_texture - find: shallowly pitted - replace: pitted -- trait_name: seed_surface_texture - find: pitted papillose - replace: pitted bumpy - trait_name: dispersal_appendage - find: wing - replace: wings -- trait_name: dispersal_appendage - find: pappus - replace: pappus -- trait_name: dispersal_appendage - find: pappus hairs - replace: pappus + find: attached carpels + replace: floral_parts - trait_name: dispersal_appendage find: awn replace: bristles - trait_name: dispersal_appendage - find: hairs persistent flower parts - replace: floral_parts + find: awn bristles + replace: bristles - trait_name: dispersal_appendage - find: spines hairs - replace: spines hairs + find: awn hairs + replace: bristles hairs - trait_name: dispersal_appendage - find: caruncle - replace: elaiosome + find: awns + replace: bristles - trait_name: dispersal_appendage - find: hook - replace: hooks + find: awns bristles + replace: bristles - trait_name: dispersal_appendage - find: inflated seed coat - replace: inflated_parts + find: awns hairs + replace: bristles hairs - trait_name: dispersal_appendage - find: pseudo-wing - replace: wings + find: barbs + replace: hooks - trait_name: dispersal_appendage - find: awn hairs - replace: bristles hairs + find: beak + replace: floral_parts - trait_name: dispersal_appendage find: bract replace: bracts_and_glumes - trait_name: dispersal_appendage - find: inflated cell layer - replace: inflated_parts + find: bracts + replace: bracts_and_glumes - trait_name: dispersal_appendage - find: strophiole + find: bristles persistent style + replace: bristles floral_parts +- trait_name: dispersal_appendage + find: caruncle replace: elaiosome - trait_name: dispersal_appendage - find: persistent calyx - replace: floral_parts + find: curved awn + replace: bristles - trait_name: dispersal_appendage - find: persistent sepals - replace: floral_parts + find: enclosing wing + replace: wings - trait_name: dispersal_appendage - find: persistent funicle + find: feathery style + replace: plumose +- trait_name: dispersal_appendage + find: glumes + replace: bracts_and_glumes +- trait_name: dispersal_appendage + find: hairs bracts + replace: hairs bracts_and_glumes +- trait_name: dispersal_appendage + find: hairs persistent flower parts replace: floral_parts - trait_name: dispersal_appendage - find: barbs + find: hook replace: hooks - trait_name: dispersal_appendage - find: enclosing wing - replace: wings -- trait_name: dispersal_appendage - find: spine - replace: spines + find: hook hairs + replace: hooks hairs - trait_name: dispersal_appendage - find: awns - replace: bristles + find: inflated cell layer + replace: inflated_parts - trait_name: dispersal_appendage - find: awns hairs - replace: bristles hairs + find: inflated seed coat + replace: inflated_parts - trait_name: dispersal_appendage find: paddles replace: wings - trait_name: dispersal_appendage - find: persistent style - replace: floral_parts + find: pappus + replace: pappus - trait_name: dispersal_appendage - find: beak - replace: floral_parts + find: pappus hairs + replace: pappus - trait_name: dispersal_appendage - find: hairs bracts - replace: hairs bracts_and_glumes + find: persistent bracts + replace: bracts_and_glumes - trait_name: dispersal_appendage - find: attached carpels + find: persistent calyx replace: floral_parts - trait_name: dispersal_appendage - find: placental endocarp - replace: fleshy_reward -- trait_name: dispersal_appendage - find: bristles persistent style - replace: bristles floral_parts + find: persistent floral parts + replace: floral_parts - trait_name: dispersal_appendage - find: awn bristles - replace: bristles + find: persistent flower parts + replace: floral_parts - trait_name: dispersal_appendage - find: persistent bracts - replace: bracts_and_glumes + find: persistent funicle + replace: floral_parts - trait_name: dispersal_appendage - find: bracts + find: persistent glumes replace: bracts_and_glumes - trait_name: dispersal_appendage - find: short hairs - replace: hairs -- trait_name: dispersal_appendage - find: persistent tepals + find: persistent sepals replace: floral_parts - trait_name: dispersal_appendage - find: style stigma + find: persistent style replace: floral_parts - trait_name: dispersal_appendage - find: tiny barbs - replace: hooks + find: persistent tepals + replace: floral_parts - trait_name: dispersal_appendage - find: persistent glumes - replace: bracts_and_glumes + find: placental endocarp + replace: fleshy_reward - trait_name: dispersal_appendage - find: glumes - replace: bracts_and_glumes + find: pseudo-wing + replace: wings - trait_name: dispersal_appendage find: reduced pappus replace: pappus - trait_name: dispersal_appendage - find: awns bristles - replace: bristles + find: short hairs + replace: hairs - trait_name: dispersal_appendage - find: feathery style - replace: plumose + find: spine + replace: spines - trait_name: dispersal_appendage - find: curved awn - replace: bristles + find: spines hairs + replace: spines hairs - trait_name: dispersal_appendage - find: persistent flower parts - replace: floral_parts + find: strophiole + replace: elaiosome - trait_name: dispersal_appendage - find: persistent floral parts + find: style stigma replace: floral_parts - trait_name: dispersal_appendage - find: hook hairs - replace: hooks hairs -- trait_name: seed_surface_texture - find: scales - replace: scaly -- trait_name: seed_germination_treatment - find: Dry heat applied at a temperature for a period. - replace: after_ripening -- trait_name: seed_germination_treatment - find: Dry heat applied at a temperature for a period. followed by dip in cool water - replace: after_ripening -- trait_name: seed_germination_treatment - find: Apply chemical to the seed. - replace: chemical_treatment -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soaked in Kirstenbosch seed primer - replace: chemical_treatment -- trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. (temp unrecorded) - replace: imbibe_hot -- trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. (temperature - unrecorded) - replace: imbibe_hot -- trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. Estimated temperature - replace: imbibe_hot -- trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. For germ test - replace: imbibe_hot -- trait_name: seed_germination_treatment - find: Leach the seed for a time period. soak in water to wash off any salt - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. 2% bleach - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. 2% Bleach - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. 30 mins - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. Bracts and bracteoles removed - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. Distilled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. Distiolled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. imbibed with distilled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. in distilled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. in room temp water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. in water, then rinsed - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. removed bracts/bracteoles - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. room temp water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. Seeds soaked in 2% bleach for 30 mins, then - rinsed well. Seeds were then imbibed with distilled water for 1 hour. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds were soake din 2% bleach for 30 mins, - then rinsed well. seeds were then imbibed with distilled water for 1 hour. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds were soaked in 2% bleach for 30 mins, - then rinsed well. Seeds were then imbibed with distilled water for 1 hour. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds were soaked in 2% calcium hypochlorite - for 30 mins then rinsed 5 times with distilled water. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds were soaked in 2% calcium hypochlorite - for 30 mins, then rinsed 5 times in distilled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds were soaked in 2% calcium hypochlorite - for 30mins, then rinsed 5 times in distilled water. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds were soaked in calcium hypochlorite - for 30 mins then rinsed 5 times with distilled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soak seed in 2% calcium hypochlorite for - 30 mins, then rinse 5 times in distilled water. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soaked in 2% bleach for 30 mins, then rinsed - thoroughly. Seeds then imbibed with distilled water for 1 hour. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soaked in 2% calcium hypochlorite then rinsed - with distilled water 5 times. - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soaked in distilled water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soaked in water - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. soaked in water after removing bracts and - bracteoles - replace: .na -- trait_name: seed_germination_treatment - find: Soak the seed for a time period. to check imbibition - replace: .na + find: tiny barbs + replace: hooks +- trait_name: dispersal_appendage + find: wing + replace: wings - trait_name: seed_germination_treatment - find: Soak the seed for a time period. unable to remove hard hairy seed coat - replace: .na + find: Apply chemical to the seed. + replace: chemical_treatment - trait_name: seed_germination_treatment - find: Soak the seed for a time period. unknown duration - replace: .na + find: Chip seed. + replace: scarify - trait_name: seed_germination_treatment - find: "soak the seed for a time period. \r\n\r\n\r\n" - replace: .na + find: Chip seed. Removed bracts + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. Unknown duration - replace: .na + find: Crack seed. + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. water - replace: .na + find: Crack seed. All seeds put into a small vice and seed coats slightly cracked + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. seeds soaked after heat treatment - replace: imbibe_hot + find: Crack seed. Using vice + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. Hard hairy coats. 1 seed removed from coat - with difficulty. Placed all on agar. + find: Crack seed. cracked using a vice. up to 6 seed extracted per pod using needle/tweezers replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. outer seed casing removed after soak + find: Crack seed. loosened with a vice replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. outer seed casing removed afterwards + find: Crack seed. up to 6 seed extracted from each pod using needle/tweezers replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. removed outer seed casing after soak. When - examined, only a small proportion of the seed look ok. The rest look immature/ - shrivelled. + find: Crack seed. vice used. up to 6 seeds extracted using needle/tweezers replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. removed outer seed casing after soaking + find: Dry heat applied at a temperature for a period. + replace: after_ripening +- trait_name: seed_germination_treatment + find: Dry heat applied at a temperature for a period. followed by dip in cool water + replace: after_ripening +- trait_name: seed_germination_treatment + find: File seed. replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. removed outer seed casing afterwards + find: File seed. Used dremel to scarify seed coat replace: scarify - trait_name: seed_germination_treatment find: Immersed in hot/boiling water at a temperature for a period. @@ -14045,10 +13682,6 @@ substitutions: find: Immersed in hot/boiling water at a temperature for a period. "off the biol" for 3 mins replace: imbibe_hot -- trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. "off the boil' for - 3 mins - replace: imbibe_hot - trait_name: seed_germination_treatment find: Immersed in hot/boiling water at a temperature for a period. "off the boil" replace: imbibe_hot @@ -14069,34 +13702,32 @@ substitutions: water replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. (estd temp for - water off the boil) + find: Immersed in hot/boiling water at a temperature for a period. "off the boil' for + 3 mins replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. 90 deg at start + find: Immersed in hot/boiling water at a temperature for a period. 'off the boil' + hot water treated replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. near boiling - water + find: Immersed in hot/boiling water at a temperature for a period. (estd temp for + water off the boil) replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. off the boil + find: Immersed in hot/boiling water at a temperature for a period. (temp unrecorded) replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. 'off the boil' - hot water treated + find: Immersed in hot/boiling water at a temperature for a period. (temperature + unrecorded) replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. seed thoroughly - dried before plating + find: Immersed in hot/boiling water at a temperature for a period. 90 deg at start replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. seeds thoroughly - dried before plating + find: Immersed in hot/boiling water at a temperature for a period. Estimated temperature replace: imbibe_hot - trait_name: seed_germination_treatment - find: Immersed in hot/boiling water at a temperature for a period. slightly cooled - boiling water + find: Immersed in hot/boiling water at a temperature for a period. For germ test replace: imbibe_hot - trait_name: seed_germination_treatment find: Immersed in hot/boiling water at a temperature for a period. Soaked in off @@ -14107,347 +13738,437 @@ substitutions: after boiling replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. 1 min off-boil treatment + find: Immersed in hot/boiling water at a temperature for a period. near boiling + water replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. cooled boiling water + find: Immersed in hot/boiling water at a temperature for a period. off the boil replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. hot water + find: Immersed in hot/boiling water at a temperature for a period. seed thoroughly + dried before plating replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. Hot water + find: Immersed in hot/boiling water at a temperature for a period. seeds thoroughly + dried before plating replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. in water that had been boiled and cooled + find: Immersed in hot/boiling water at a temperature for a period. slightly cooled + boiling water replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. near boiling water - replace: imbibe_hot + find: Leach the seed for a time period. soak in water to wash off any salt + replace: .na.character - trait_name: seed_germination_treatment - find: Soak the seed for a time period. Soaked in cooled boiled water - replace: imbibe_hot + find: Nick seed. + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. Used boiled water cooled 15 sec - replace: imbibe_hot + find: Nick seed. Mericarp plug removed + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. used boiled water cooled for 15 sec - replace: imbibe_hot + find: Nick seed. Remove mericarp plug + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. Used boiled water that had been cooled - replace: imbibe_hot + find: Nick seed. Removed mericarp plug + replace: scarify - trait_name: seed_germination_treatment - find: Soak the seed for a time period. used cooled boiled water - replace: imbibe_hot + find: Nick seed. Scarified between sand paper + replace: scarify +- trait_name: seed_germination_treatment + find: Nick seed. Scarified seed between sand paper + replace: scarify +- trait_name: seed_germination_treatment + find: Nick seed. sanded lightly on 220 grit + replace: scarify +- trait_name: seed_germination_treatment + find: Nick seed. scalpel + replace: scarify +- trait_name: seed_germination_treatment + find: Nick seed. seeds were imbibed, then nicked + replace: scarify +- trait_name: seed_germination_treatment + find: Nick seed. seeds were nicked after being imbibed + replace: scarify +- trait_name: seed_germination_treatment + find: Put seed in smoked water. + replace: smoke +- trait_name: seed_germination_treatment + find: Put seed in smoked water. 1/100 dilute smoke wate immersion + replace: smoke +- trait_name: seed_germination_treatment + find: "Put seed in smoked water. 10% solution of 'Smokemaster'\r\nsoak seeds in + this before placing into agar" + replace: smoke +- trait_name: seed_germination_treatment + find: Put seed in smoked water. seeds soaked in 10% 'Smokemaster' solution first + replace: smoke +- trait_name: seed_germination_treatment + find: Put seed in smoked water. soak seed in 10% 'Smokemaster' solution + replace: smoke +- trait_name: seed_germination_treatment + find: Put seed in smoked water. soak seed in 10% 'Smokemaster' solution first + replace: smoke +- trait_name: seed_germination_treatment + find: Put seed in smoked water. soak seeds in 10% 'Smokemaster' solution first + replace: smoke +- trait_name: seed_germination_treatment + find: Remove seed coat. + replace: scarify +- trait_name: seed_germination_treatment + find: Remove seed coat. Bract + replace: scarify +- trait_name: seed_germination_treatment + find: Remove seed coat. Bracts + replace: scarify +- trait_name: seed_germination_treatment + find: Remove seed coat. outer woody husk removed + replace: scarify +- trait_name: seed_germination_treatment + find: Remove seed coat. remove fruit from seed + replace: scarify +- trait_name: seed_germination_treatment + find: Remove seed coat. remove seed from fruit + replace: scarify +- trait_name: seed_germination_treatment + find: Simulate smoke conditions for a period using the disk method. + replace: smoke +- trait_name: seed_germination_treatment + find: Simulate smoke conditions for a period using the disk method. 25 mls of water + replace: smoke +- trait_name: seed_germination_treatment + find: Simulate smoke conditions for a period using the disk method. 25 mls water + replace: smoke +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Add 10 mls Mancozeb + - 1.5g/l to cotton wool cover with 2 x filter papers. + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Add 10 mls mancozeb + (1.5g/l) to cotton wool and cover with filter paper + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Add 10 mls mancozeb + 1.5g/l to cotton wool and cover with filter paper + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Add 10mls mancozeb + 1.5g/l to cotton wool and cover with filter paper + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Contaminated + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Out of cold strat + on 21/08/2008 + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Out on 21/08/08 + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Out on 21/08/2008 + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Removed 13 empty + seeds + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. Removed early due + to contamination + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. add 10 mls mancozed + (1.5g/l) to cotton wool and cover with filter paper + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. fridge + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. fridge temp not + recorded on data sheet - estimate only + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. fridge temp not + recorded, 10 deg estimate for data entry + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. in lab fridge + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating cold conditions at a temperature for a period. temp not recorded + on data sheet - 10 estimated for data entry + replace: stratification_cold +- trait_name: seed_germination_treatment + find: Simulating warm conditions at a temperature for a period. + replace: stratification_warm +- trait_name: seed_germination_treatment + find: Simulating warm conditions at a temperature for a period. No light + replace: stratification_warm +- trait_name: seed_germination_treatment + find: Simulating warm conditions at a temperature for a period. Removed from = day + 1in incubator 2 + replace: stratification_warm +- trait_name: seed_germination_treatment + find: Simulating warm conditions at a temperature for a period. Terminated warm + strat - removed tin foil + replace: stratification_warm +- trait_name: seed_germination_treatment + find: Simulating warm conditions at a temperature for a period. might be duplicate + of previous treatment + replace: stratification_warm +- trait_name: seed_germination_treatment + find: Soak the seed for a time period. + replace: .na.character - trait_name: seed_germination_treatment - find: Soak the seed for a time period. water boiled and cooled + find: Soak the seed for a time period. 1 min off-boil treatment replace: imbibe_hot - trait_name: seed_germination_treatment - find: Soak the seed for a time period. water boiled before cooling - replace: imbibe_hot + find: Soak the seed for a time period. 10% smoke-water solution + replace: smoke - trait_name: seed_germination_treatment - find: Wash the seed. rinse 4x + find: Soak the seed for a time period. 2% Bleach replace: .na.character - trait_name: seed_germination_treatment - find: Wash the seed. Rinse 4x + find: Soak the seed for a time period. 2% bleach replace: .na.character - trait_name: seed_germination_treatment - find: Wash the seed. rinsed 4x + find: Soak the seed for a time period. 30 mins replace: .na.character - trait_name: seed_germination_treatment - find: Wash the seed. soaked in water 15 min to wash off any salt + find: Soak the seed for a time period. Bracts and bracteoles removed replace: .na.character - trait_name: seed_germination_treatment - find: Wash the seed. Soaked seeds in water 15 mins to wash off any salt + find: Soak the seed for a time period. Distilled water replace: .na.character - trait_name: seed_germination_treatment - find: Chip seed. - replace: scarify -- trait_name: seed_germination_treatment - find: Chip seed. Removed bracts - replace: scarify -- trait_name: seed_germination_treatment - find: Crack seed. - replace: scarify -- trait_name: seed_germination_treatment - find: Crack seed. All seeds put into a small vice and seed coats slightly cracked - replace: scarify -- trait_name: seed_germination_treatment - find: Crack seed. cracked using a vice. up to 6 seed extracted per pod using needle/tweezers - replace: scarify + find: Soak the seed for a time period. Distiolled water + replace: .na.character - trait_name: seed_germination_treatment - find: Crack seed. loosened with a vice + find: Soak the seed for a time period. Hard hairy coats. 1 seed removed from coat + with difficulty. Placed all on agar. replace: scarify - trait_name: seed_germination_treatment - find: Crack seed. up to 6 seed extracted from each pod using needle/tweezers - replace: scarify + find: Soak the seed for a time period. Hot water + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Crack seed. Using vice - replace: scarify + find: Soak the seed for a time period. Seeds soaked in 2% bleach for 30 mins, then + rinsed well. Seeds were then imbibed with distilled water for 1 hour. + replace: .na.character - trait_name: seed_germination_treatment - find: Crack seed. vice used. up to 6 seeds extracted using needle/tweezers - replace: scarify + find: Soak the seed for a time period. Soaked in cooled boiled water + replace: imbibe_hot - trait_name: seed_germination_treatment - find: File seed. - replace: scarify + find: Soak the seed for a time period. Unknown duration + replace: .na.character - trait_name: seed_germination_treatment - find: File seed. Used dremel to scarify seed coat - replace: scarify + find: Soak the seed for a time period. Used boiled water cooled 15 sec + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Nick seed. - replace: scarify + find: Soak the seed for a time period. Used boiled water that had been cooled + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Nick seed. Mericarp plug removed - replace: scarify + find: Soak the seed for a time period. cooled boiling water + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Nick seed. Remove mericarp plug - replace: scarify + find: Soak the seed for a time period. hot water + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Nick seed. Removed mericarp plug - replace: scarify + find: Soak the seed for a time period. imbibed with distilled water + replace: .na.character - trait_name: seed_germination_treatment - find: Nick seed. sanded lightly on 220 grit - replace: scarify + find: Soak the seed for a time period. in distilled water + replace: .na.character - trait_name: seed_germination_treatment - find: Nick seed. scalpel - replace: scarify + find: Soak the seed for a time period. in room temp water + replace: .na.character - trait_name: seed_germination_treatment - find: Nick seed. Scarified between sand paper - replace: scarify + find: Soak the seed for a time period. in water that had been boiled and cooled + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Nick seed. Scarified seed between sand paper - replace: scarify + find: Soak the seed for a time period. in water, then rinsed + replace: .na.character - trait_name: seed_germination_treatment - find: Nick seed. seeds were imbibed, then nicked - replace: scarify + find: Soak the seed for a time period. near boiling water + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Nick seed. seeds were nicked after being imbibed + find: Soak the seed for a time period. outer seed casing removed after soak replace: scarify - trait_name: seed_germination_treatment - find: Remove seed coat. + find: Soak the seed for a time period. outer seed casing removed afterwards replace: scarify - trait_name: seed_germination_treatment - find: Remove seed coat. Bract - replace: scarify + find: Soak the seed for a time period. removed bracts/bracteoles + replace: .na.character - trait_name: seed_germination_treatment - find: Remove seed coat. Bracts + find: Soak the seed for a time period. removed outer seed casing after soak. When + examined, only a small proportion of the seed look ok. The rest look immature/ + shrivelled. replace: scarify - trait_name: seed_germination_treatment - find: Remove seed coat. outer woody husk removed + find: Soak the seed for a time period. removed outer seed casing after soaking replace: scarify - trait_name: seed_germination_treatment - find: Remove seed coat. remove fruit from seed + find: Soak the seed for a time period. removed outer seed casing afterwards replace: scarify - trait_name: seed_germination_treatment - find: Remove seed coat. remove seed from fruit - replace: scarify + find: Soak the seed for a time period. room temp water + replace: .na.character - trait_name: seed_germination_treatment - find: Simulate smoke conditions for a period using the disk method. - replace: smoke + find: Soak the seed for a time period. seeds soaked after heat treatment + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Simulate smoke conditions for a period using the disk method. 25 mls of water - replace: smoke + find: Soak the seed for a time period. seeds were soake din 2% bleach for 30 mins, + then rinsed well. seeds were then imbibed with distilled water for 1 hour. + replace: .na.character - trait_name: seed_germination_treatment - find: Simulate smoke conditions for a period using the disk method. 25 mls water - replace: smoke + find: Soak the seed for a time period. seeds were soaked in 2% bleach for 30 mins, + then rinsed well. Seeds were then imbibed with distilled water for 1 hour. + replace: .na.character - trait_name: seed_germination_treatment - find: Put seed in smoked water. - replace: smoke + find: Soak the seed for a time period. seeds were soaked in 2% calcium hypochlorite + for 30 mins then rinsed 5 times with distilled water. + replace: .na.character - trait_name: seed_germination_treatment - find: Put seed in smoked water. 1/100 dilute smoke wate immersion - replace: smoke + find: Soak the seed for a time period. seeds were soaked in 2% calcium hypochlorite + for 30 mins, then rinsed 5 times in distilled water + replace: .na.character - trait_name: seed_germination_treatment - find: "Put seed in smoked water. 10% solution of 'Smokemaster'\r\nsoak seeds in - this before placing into agar" - replace: smoke + find: Soak the seed for a time period. seeds were soaked in 2% calcium hypochlorite + for 30mins, then rinsed 5 times in distilled water. + replace: .na.character - trait_name: seed_germination_treatment - find: Put seed in smoked water. seeds soaked in 10% 'Smokemaster' solution first - replace: smoke + find: Soak the seed for a time period. seeds were soaked in calcium hypochlorite + for 30 mins then rinsed 5 times with distilled water + replace: .na.character - trait_name: seed_germination_treatment - find: Put seed in smoked water. soak seed in 10% 'Smokemaster' solution - replace: smoke + find: Soak the seed for a time period. soak seed in 2% calcium hypochlorite for + 30 mins, then rinse 5 times in distilled water. + replace: .na.character - trait_name: seed_germination_treatment - find: Put seed in smoked water. soak seed in 10% 'Smokemaster' solution first - replace: smoke + find: Soak the seed for a time period. soaked in 2% bleach for 30 mins, then rinsed + thoroughly. Seeds then imbibed with distilled water for 1 hour. + replace: .na.character - trait_name: seed_germination_treatment - find: Put seed in smoked water. soak seeds in 10% 'Smokemaster' solution first - replace: smoke + find: Soak the seed for a time period. soaked in 2% calcium hypochlorite then rinsed + with distilled water 5 times. + replace: .na.character - trait_name: seed_germination_treatment - find: Soak the seed for a time period. 10% smoke-water solution - replace: smoke + find: Soak the seed for a time period. soaked in Kirstenbosch seed primer + replace: chemical_treatment - trait_name: seed_germination_treatment find: Soak the seed for a time period. soaked in Regen smoked water replace: smoke - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. - replace: stratification_cold -- trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Add 10 mls Mancozeb - - 1.5g/l to cotton wool cover with 2 x filter papers. - replace: stratification_cold -- trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Add 10 mls mancozeb - (1.5g/l) to cotton wool and cover with filter paper - replace: stratification_cold -- trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Add 10 mls mancozeb - 1.5g/l to cotton wool and cover with filter paper - replace: stratification_cold -- trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. add 10 mls mancozed - (1.5g/l) to cotton wool and cover with filter paper - replace: stratification_cold + find: Soak the seed for a time period. soaked in distilled water + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Add 10mls mancozeb - 1.5g/l to cotton wool and cover with filter paper - replace: stratification_cold + find: Soak the seed for a time period. soaked in water + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Contaminated - replace: stratification_cold + find: Soak the seed for a time period. soaked in water after removing bracts and + bracteoles + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. fridge - replace: stratification_cold + find: Soak the seed for a time period. to check imbibition + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. fridge temp not - recorded on data sheet - estimate only - replace: stratification_cold + find: Soak the seed for a time period. unable to remove hard hairy seed coat + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. fridge temp not - recorded, 10 deg estimate for data entry - replace: stratification_cold + find: Soak the seed for a time period. unknown duration + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. in lab fridge - replace: stratification_cold + find: Soak the seed for a time period. used boiled water cooled for 15 sec + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Out of cold strat - on 21/08/2008 - replace: stratification_cold + find: Soak the seed for a time period. used cooled boiled water + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Out on 21/08/08 - replace: stratification_cold + find: Soak the seed for a time period. water + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Out on 21/08/2008 - replace: stratification_cold + find: Soak the seed for a time period. water boiled and cooled + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Removed 13 empty - seeds - replace: stratification_cold + find: Soak the seed for a time period. water boiled before cooling + replace: imbibe_hot - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. Removed early due - to contamination - replace: stratification_cold + find: Wash the seed. Rinse 4x + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating cold conditions at a temperature for a period. temp not recorded - on data sheet - 10 estimated for data entry - replace: stratification_cold + find: Wash the seed. Soaked seeds in water 15 mins to wash off any salt + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating warm conditions at a temperature for a period. - replace: stratification_warm + find: Wash the seed. rinse 4x + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating warm conditions at a temperature for a period. might be duplicate - of previous treatment - replace: stratification_warm + find: Wash the seed. rinsed 4x + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating warm conditions at a temperature for a period. No light - replace: stratification_warm + find: Wash the seed. soaked in water 15 min to wash off any salt + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating warm conditions at a temperature for a period. Removed from = day - 1in incubator 2 - replace: stratification_warm + find: soak the seed for a time period. + replace: .na.character - trait_name: seed_germination_treatment - find: Simulating warm conditions at a temperature for a period. Terminated warm - strat - removed tin foil - replace: stratification_warm -- trait_name: seed_shape - find: conical - replace: conical -- trait_name: seed_shape - find: comma-shaped - replace: comma-shaped -- trait_name: seed_shape - find: comma-shaped sectoroid - replace: comma-shaped sectoroid + find: "soak the seed for a time period. \r\n\r\n\r\n" + replace: .na.character - trait_name: seed_shape - find: falcate - replace: comma-shaped + find: angled fusiform samara + replace: fusiform polyhedral winged - trait_name: seed_shape - find: falcate sinusoid - replace: comma-shaped sinusoidal + find: bisected oblong-cylindric + replace: reniform cylindrical - trait_name: seed_shape - find: horseshoe crab shaped - replace: hemispheric + find: bisected ovoid + replace: reniform - trait_name: seed_shape - find: irregular - replace: comma-shaped + find: bulging disc + replace: discoid - trait_name: seed_shape - find: roughly sigmoidal + find: comma-shaped replace: comma-shaped - trait_name: seed_shape - find: slightly sinusoidal - replace: sinusoidal -- trait_name: seed_shape - find: spoon-shaped - replace: ovoid_elongated + find: comma-shaped pyramidal + replace: comma-shaped polyhedral - trait_name: seed_shape - find: tight U-shape - replace: comma-shaped + find: comma-shaped sectoroid + replace: comma-shaped sectoroid - trait_name: seed_shape - find: curved cylindrical - replace: comma-shaped cylindrical + find: conical + replace: conical - trait_name: seed_shape - find: curved terete - replace: comma-shaped cylindrical + find: cordate + replace: reniform - trait_name: seed_shape - find: sinusoid terete - replace: sinusoidal cylindrical + find: cuneate + replace: sectoroid - trait_name: seed_shape - find: terete falcate + find: curved cylindrical replace: comma-shaped cylindrical - trait_name: seed_shape find: curved ovuloid replace: comma-shaped ovoid -- trait_name: seed_shape - find: comma-shaped pyramidal - replace: comma-shaped polyhedral - trait_name: seed_shape find: curved rectangular replace: comma-shaped polyhedral -- trait_name: seed_shape - find: rectangular sigmoidal - replace: comma-shaped polyhedral - trait_name: seed_shape find: curved samara replace: comma-shaped winged - trait_name: seed_shape - find: sinusoidal samara - replace: sinusoidal winged + find: curved terete + replace: comma-shaped cylindrical - trait_name: seed_shape find: cylindrical replace: cylindrical - trait_name: seed_shape - find: short terete - replace: cylindrical -- trait_name: seed_shape - find: terete - replace: cylindrical -- trait_name: seed_shape - find: terete club-shaped - replace: cylindrical ovoid_elongated -- trait_name: seed_shape - find: bulging disc - replace: discoid + find: deformed ovoid + replace: ovoid - trait_name: seed_shape find: discoid replace: discoid -- trait_name: seed_shape - find: flattened cylinder - replace: discoid -- trait_name: seed_shape - find: flattened cylindrical - replace: discoid -- trait_name: seed_shape - find: flattened disc - replace: discoid - trait_name: seed_shape find: elipsoid replace: ellipsoid @@ -14455,59 +14176,62 @@ substitutions: find: ellipsoid replace: ellipsoid - trait_name: seed_shape - find: flattened ellipsoid - replace: ellipsoid_flattened + find: elongated lanceolate samara + replace: ovoid_elongated winged - trait_name: seed_shape - find: flattened, elongated fusiform - replace: fusiform + find: elongated ovoid + replace: ovoid_elongated - trait_name: seed_shape - find: fusiform - replace: fusiform + find: elongated ovoid terete + replace: ovoid_elongated cylindrical - trait_name: seed_shape - find: fusiform; concave-convex - replace: fusiform + find: elongated ovuloid + replace: ovoid_elongated - trait_name: seed_shape - find: pleated fusiform - replace: fusiform + find: elongated ovuloid teardrop + replace: ovoid_elongated - trait_name: seed_shape - find: roughly fusiform - replace: fusiform + find: elongated pyramidal + replace: polyhedral_elongated - trait_name: seed_shape - find: fusiform cylindrical - replace: fusiform cylindrical + find: elongated pyramidal rectangular + replace: polyhedral_elongated - trait_name: seed_shape - find: fusiform-cylindric - replace: fusiform cylindrical + find: elongated pyramidal sectoroid + replace: polyhedral_elongated sectoroid - trait_name: seed_shape - find: fusiform spheroid - replace: fusiform globoid + find: elongated rectangular + replace: polyhedral_elongated - trait_name: seed_shape - find: fusiform ovuloid - replace: fusiform ovoid + find: elongated reniform + replace: reniform - trait_name: seed_shape - find: ovuloid fusiform - replace: fusiform ovoid + find: elongated reniform, globose irregular + replace: reniform - trait_name: seed_shape - find: triangular fusiform - replace: fusiform polyhedral + find: elongated sectoroid + replace: sectoroid - trait_name: seed_shape - find: angled fusiform samara - replace: fusiform polyhedral winged + find: elongated teardrop ovuloid + replace: ovoid_elongated - trait_name: seed_shape - find: fusiform samara - replace: fusiform winged + find: falcate + replace: comma-shaped - trait_name: seed_shape - find: globose - replace: globoid + find: falcate sinusoid + replace: comma-shaped sinusoidal - trait_name: seed_shape - find: roughly spherical - replace: globoid + find: flattened cylinder + replace: discoid - trait_name: seed_shape - find: spherical - replace: globoid + find: flattened cylindrical + replace: discoid - trait_name: seed_shape - find: spheroid - replace: globoid + find: flattened disc + replace: discoid +- trait_name: seed_shape + find: flattened ellipsoid + replace: ellipsoid_flattened - trait_name: seed_shape find: flattened globose replace: globoid_flattened @@ -14515,65 +14239,110 @@ substitutions: find: flattened globose lanceolate replace: globoid_flattened ovoid - trait_name: seed_shape - find: semi-circular - replace: hemispheric + find: flattened ovoid + replace: ovoid_flattened - trait_name: seed_shape - find: semi-hemispherical - replace: hemispheric + find: flattened ovoid irregular + replace: ovoid_flattened - trait_name: seed_shape - find: deformed ovoid - replace: ovoid + find: flattened ovoid reniform + replace: ovoid_flattened reniform - trait_name: seed_shape - find: lanceolate - replace: ovoid + find: flattened ovoid, rectangular rhomboid + replace: ovoid_flattened polyhedral - trait_name: seed_shape - find: ovoid - replace: ovoid + find: flattened ovoid, rectangular triangular + replace: ovoid_flattened polyhedral - trait_name: seed_shape - find: ovoid irregular - replace: ovoid + find: flattened ovuloid + replace: ovoid_flattened - trait_name: seed_shape - find: ovuloid - replace: ovoid + find: flattened ovuloid rectangular + replace: ovoid_flattened polyhedral - trait_name: seed_shape - find: ovuloid irregular - replace: ovoid + find: flattened ovuloid reniform + replace: ovoid_flattened reniform - trait_name: seed_shape - find: ovuloid lanceolate - replace: ovoid + find: flattened rectangular teardrop + replace: ovoid_flattened polyhedral - trait_name: seed_shape - find: roughly ovoid - replace: ovoid + find: flattened sectoroid + replace: sectoroid - trait_name: seed_shape - find: roughly ovuloid - replace: ovoid + find: flattened teardrop ovuloid + replace: ovoid_flattened ovoid - trait_name: seed_shape - find: ovoid terete - replace: ovoid cylindrical + find: flattened, elongated fusiform + replace: fusiform - trait_name: seed_shape - find: ovoid spherical - replace: ovoid globoid + find: fusiform + replace: fusiform - trait_name: seed_shape - find: ovuloid hemispherical - replace: ovoid hemispheric + find: fusiform cylindrical + replace: fusiform cylindrical +- trait_name: seed_shape + find: fusiform ovuloid + replace: fusiform ovoid +- trait_name: seed_shape + find: fusiform samara + replace: fusiform winged +- trait_name: seed_shape + find: fusiform spheroid + replace: fusiform globoid +- trait_name: seed_shape + find: fusiform-cylindric + replace: fusiform cylindrical +- trait_name: seed_shape + find: fusiform; concave-convex + replace: fusiform +- trait_name: seed_shape + find: globose + replace: globoid +- trait_name: seed_shape + find: horseshoe crab shaped + replace: hemispheric +- trait_name: seed_shape + find: inflated pyramidal + replace: polyhedral_inflated +- trait_name: seed_shape + find: irregular + replace: comma-shaped +- trait_name: seed_shape + find: irregular pyramidal + replace: polyhedral - trait_name: seed_shape - find: ovuloid roughly teardrop - replace: ovoid ovoid_elongated + find: irregular sectoroid + replace: sectoroid - trait_name: seed_shape - find: ovuloid teardrop - replace: ovoid ovoid_elongated + find: lanceolate + replace: ovoid - trait_name: seed_shape - find: roughly teardrop ovuloid - replace: ovoid ovoid_elongated + find: lanceolate samara + replace: ovoid winged - trait_name: seed_shape - find: teardrop ovuloid - replace: ovoid ovoid_elongated + find: ovoid + replace: ovoid +- trait_name: seed_shape + find: ovoid irregular + replace: ovoid - trait_name: seed_shape find: ovoid rectangular replace: ovoid polyhedral - trait_name: seed_shape find: ovoid rhomboid replace: ovoid polyhedral +- trait_name: seed_shape + find: ovoid samara + replace: ovoid winged +- trait_name: seed_shape + find: ovoid samara with triangular kernel + replace: ovoid winged +- trait_name: seed_shape + find: ovoid spherical + replace: ovoid globoid +- trait_name: seed_shape + find: ovoid terete + replace: ovoid cylindrical - trait_name: seed_shape find: ovoid triangular replace: ovoid polyhedral @@ -14581,128 +14350,119 @@ substitutions: find: ovoid-triangular replace: ovoid polyhedral - trait_name: seed_shape - find: ovuloid rectangular - replace: ovoid polyhedral + find: ovuloid + replace: ovoid - trait_name: seed_shape - find: ovuloid rectangular; deformed - replace: ovoid polyhedral + find: ovuloid fusiform + replace: fusiform ovoid - trait_name: seed_shape - find: ovuloid rhomboid + find: ovuloid hemispherical + replace: ovoid hemispheric +- trait_name: seed_shape + find: ovuloid inflated sectoroid + replace: ovoid sectoroid +- trait_name: seed_shape + find: ovuloid irregular + replace: ovoid +- trait_name: seed_shape + find: ovuloid lanceolate + replace: ovoid +- trait_name: seed_shape + find: ovuloid rectangular replace: ovoid polyhedral - trait_name: seed_shape - find: rectangular ovoid + find: ovuloid rectangular; deformed replace: ovoid polyhedral - trait_name: seed_shape find: ovuloid reniform replace: ovoid reniform - trait_name: seed_shape - find: reniform ovoid - replace: ovoid reniform -- trait_name: seed_shape - find: lanceolate samara - replace: ovoid winged -- trait_name: seed_shape - find: ovoid samara - replace: ovoid winged + find: ovuloid rhomboid + replace: ovoid polyhedral - trait_name: seed_shape - find: ovoid samara with triangular kernel - replace: ovoid winged + find: ovuloid roughly teardrop + replace: ovoid ovoid_elongated - trait_name: seed_shape find: ovuloid samara replace: ovoid winged -- trait_name: seed_shape - find: ovuloid inflated sectoroid - replace: ovoid sectoroid - trait_name: seed_shape find: ovuloid sectoroid replace: ovoid sectoroid - trait_name: seed_shape - find: roughly teardrop - replace: ovoid_elongated -- trait_name: seed_shape - find: roughly teardrop shaped - replace: ovoid_elongated -- trait_name: seed_shape - find: teardrop - replace: ovoid_elongated -- trait_name: seed_shape - find: teardrop irregular - replace: ovoid_elongated -- trait_name: seed_shape - find: teardrop shaped - replace: ovoid_elongated -- trait_name: seed_shape - find: elongated ovoid - replace: ovoid_elongated + find: ovuloid teardrop + replace: ovoid ovoid_elongated - trait_name: seed_shape - find: elongated ovuloid - replace: ovoid_elongated + find: pinched ovoid + replace: ovoid_flattened - trait_name: seed_shape - find: elongated ovuloid teardrop - replace: ovoid_elongated + find: pleated fusiform + replace: fusiform - trait_name: seed_shape - find: elongated teardrop ovuloid - replace: ovoid_elongated + find: pointed globular + replace: .na.character - trait_name: seed_shape find: pointed ovoid replace: ovoid_elongated - trait_name: seed_shape - find: elongated ovoid terete - replace: ovoid_elongated cylindrical + find: pointed samara + replace: winged - trait_name: seed_shape - find: elongated lanceolate samara - replace: ovoid_elongated winged + find: pyramidal + replace: polyhedral - trait_name: seed_shape - find: flattened ovoid - replace: ovoid_flattened + find: pyramidal sectoroid + replace: polyhedral_inflated - trait_name: seed_shape - find: flattened ovoid irregular - replace: ovoid_flattened + find: rectangular + replace: polyhedral - trait_name: seed_shape - find: flattened ovuloid - replace: ovoid_flattened + find: rectangular irregular + replace: polyhedral - trait_name: seed_shape - find: pinched ovoid - replace: ovoid_flattened + find: rectangular ovoid + replace: ovoid polyhedral - trait_name: seed_shape - find: flattened teardrop ovuloid - replace: ovoid_flattened ovoid + find: rectangular ovuloid + replace: polyhedral ovoid - trait_name: seed_shape - find: flattened ovoid, rectangular rhomboid - replace: ovoid_flattened polyhedral + find: rectangular sectoroid + replace: polyhedral sectoroid - trait_name: seed_shape - find: flattened ovoid, rectangular triangular - replace: ovoid_flattened polyhedral + find: rectangular sigmoidal + replace: comma-shaped polyhedral - trait_name: seed_shape - find: flattened ovuloid rectangular - replace: ovoid_flattened polyhedral + find: reniform + replace: reniform - trait_name: seed_shape - find: flattened rectangular teardrop - replace: ovoid_flattened polyhedral + find: reniform irregular + replace: reniform - trait_name: seed_shape - find: flattened ovoid reniform - replace: ovoid_flattened reniform + find: reniform ovoid + replace: ovoid reniform - trait_name: seed_shape - find: flattened ovuloid reniform - replace: ovoid_flattened reniform + find: reniform rectangular + replace: reniform polyhedral - trait_name: seed_shape - find: irregular pyramidal + find: rhomboid replace: polyhedral - trait_name: seed_shape - find: pyramidal - replace: polyhedral + find: rhomboid ovuloid + replace: polyhedral ovoid - trait_name: seed_shape - find: rectangular + find: rhomboidal replace: polyhedral - trait_name: seed_shape - find: rectangular irregular - replace: polyhedral + find: roughly fusiform + replace: fusiform - trait_name: seed_shape - find: rhomboid - replace: polyhedral + find: roughly ovoid + replace: ovoid - trait_name: seed_shape - find: rhomboidal - replace: polyhedral + find: roughly ovoid pyramidal + replace: polyhedral_inflated +- trait_name: seed_shape + find: roughly ovuloid + replace: ovoid - trait_name: seed_shape find: roughly pyramidal replace: polyhedral @@ -14713,128 +14473,302 @@ substitutions: find: roughly rectangular cordate replace: polyhedral - trait_name: seed_shape - find: roughly triangular - replace: polyhedral + find: roughly reniform + replace: reniform - trait_name: seed_shape - find: triangular - replace: polyhedral + find: roughly sectoroid + replace: sectoroid - trait_name: seed_shape - find: trigonal - replace: polyhedral + find: roughly sigmoidal + replace: comma-shaped - trait_name: seed_shape - find: trigonal pyramidal - replace: polyhedral + find: roughly spherical + replace: globoid - trait_name: seed_shape - find: terete pyramidal - replace: polyhedral cylindrical + find: roughly teardrop + replace: ovoid_elongated - trait_name: seed_shape - find: rectangular ovuloid - replace: polyhedral ovoid + find: roughly teardrop ovuloid + replace: ovoid ovoid_elongated - trait_name: seed_shape - find: rhomboid ovuloid - replace: polyhedral ovoid + find: roughly teardrop shaped + replace: ovoid_elongated - trait_name: seed_shape - find: triangular samara - replace: polyhedral winged + find: roughly triangular + replace: polyhedral - trait_name: seed_shape - find: rectangular sectoroid - replace: polyhedral sectoroid + find: rounded samara + replace: winged +- trait_name: seed_shape + find: samara + replace: winged +- trait_name: seed_shape + find: sectoroid + replace: sectoroid +- trait_name: seed_shape + find: sectoroid irregular + replace: sectoroid - trait_name: seed_shape find: sectoroid pyramidal replace: polyhedral sectoroid - trait_name: seed_shape find: sectoroid pyrimadal replace: polyhedral sectoroid +- trait_name: seed_shape + find: sectoroid samara + replace: sectoroid winged - trait_name: seed_shape find: sectoroid, pyramidal irregular replace: polyhedral sectoroid - trait_name: seed_shape - find: elongated pyramidal - replace: polyhedral_elongated -- trait_name: seed_shape - find: elongated pyramidal rectangular - replace: polyhedral_elongated -- trait_name: seed_shape - find: elongated pyramidal sectoroid - replace: polyhedral_elongated sectoroid -- trait_name: seed_shape - find: elongated rectangular - replace: polyhedral_elongated -- trait_name: seed_shape - find: inflated pyramidal - replace: polyhedral_inflated -- trait_name: seed_shape - find: pyramidal sectoroid - replace: polyhedral_inflated + find: semi-circular + replace: hemispheric - trait_name: seed_shape - find: roughly ovoid pyramidal - replace: polyhedral_inflated + find: semi-hemispherical + replace: hemispheric - trait_name: seed_shape - find: bisected ovoid - replace: reniform + find: short terete + replace: cylindrical - trait_name: seed_shape - find: cordate - replace: reniform + find: sinusoid terete + replace: sinusoidal cylindrical - trait_name: seed_shape - find: elongated reniform - replace: reniform + find: sinusoidal samara + replace: sinusoidal winged - trait_name: seed_shape - find: elongated reniform, globose irregular - replace: reniform + find: slightly sinusoidal + replace: sinusoidal - trait_name: seed_shape - find: reniform - replace: reniform + find: spherical + replace: globoid - trait_name: seed_shape - find: reniform irregular - replace: reniform + find: spheroid + replace: globoid - trait_name: seed_shape - find: roughly reniform - replace: reniform + find: spoon-shaped + replace: ovoid_elongated - trait_name: seed_shape - find: two-lobed disc - replace: reniform + find: teardrop + replace: ovoid_elongated - trait_name: seed_shape - find: bisected oblong-cylindric - replace: reniform cylindrical + find: teardrop irregular + replace: ovoid_elongated - trait_name: seed_shape - find: reniform rectangular - replace: reniform polyhedral + find: teardrop ovuloid + replace: ovoid ovoid_elongated - trait_name: seed_shape - find: pointed samara - replace: winged + find: teardrop shaped + replace: ovoid_elongated - trait_name: seed_shape - find: rounded samara - replace: winged + find: terete + replace: cylindrical - trait_name: seed_shape - find: samara - replace: winged + find: terete club-shaped + replace: cylindrical ovoid_elongated - trait_name: seed_shape - find: cuneate - replace: sectoroid + find: terete falcate + replace: comma-shaped cylindrical - trait_name: seed_shape - find: elongated sectoroid - replace: sectoroid + find: terete pyramidal + replace: polyhedral cylindrical - trait_name: seed_shape - find: flattened sectoroid - replace: sectoroid + find: tight U-shape + replace: comma-shaped - trait_name: seed_shape - find: irregular sectoroid - replace: sectoroid + find: triangular + replace: polyhedral - trait_name: seed_shape - find: roughly sectoroid - replace: sectoroid + find: triangular fusiform + replace: fusiform polyhedral - trait_name: seed_shape - find: sectoroid - replace: sectoroid + find: triangular samara + replace: polyhedral winged - trait_name: seed_shape - find: sectoroid irregular - replace: sectoroid + find: trigonal + replace: polyhedral - trait_name: seed_shape - find: sectoroid samara - replace: sectoroid winged + find: trigonal pyramidal + replace: polyhedral - trait_name: seed_shape - find: pointed globular + find: two-lobed disc + replace: reniform +- trait_name: seed_surface_hairs + find: ciliate + replace: hairs_simple +- trait_name: seed_surface_hairs + find: cilliate + replace: hairs_simple +- trait_name: seed_surface_hairs + find: hairs + replace: hairs +- trait_name: seed_surface_hairs + find: plumose + replace: hairs_branched +- trait_name: seed_surface_hairs + find: stellate + replace: hairs_branched +- trait_name: seed_surface_hairs + find: tomentose + replace: hairs_simple +- trait_name: seed_surface_hairs + find: velutinous + replace: hairs_simple +- trait_name: seed_surface_texture + find: acutely reticulate + replace: netted +- trait_name: seed_surface_texture + find: chartaceous + replace: papery +- trait_name: seed_surface_texture + find: costate + replace: ribbed +- trait_name: seed_surface_texture + find: costate finely textured + replace: ribbed +- trait_name: seed_surface_texture + find: costate papillose + replace: ribbed bumpy +- trait_name: seed_surface_texture + find: costate smooth + replace: ribbed smooth +- trait_name: seed_surface_texture + find: costate tomentose + replace: ribbed +- trait_name: seed_surface_texture + find: deeply reticulate + replace: netted +- trait_name: seed_surface_texture + find: deeply rugose + replace: wrinkled +- trait_name: seed_surface_texture + find: dimpled + replace: pitted +- trait_name: seed_surface_texture + find: dimpled rough + replace: pitted rough +- trait_name: seed_surface_texture + find: finely rugose + replace: wrinkled +- trait_name: seed_surface_texture + find: finely textured + replace: .na.character +- trait_name: seed_surface_texture + find: fluted + replace: ribbed +- trait_name: seed_surface_texture + find: lineolate + replace: ribbed +- trait_name: seed_surface_texture + find: micronate-tubercular + replace: bumpy +- trait_name: seed_surface_texture + find: multi-faceted replace: .na.character +- trait_name: seed_surface_texture + find: papillate + replace: bumpy +- trait_name: seed_surface_texture + find: papillose + replace: bumpy +- trait_name: seed_surface_texture + find: pitted papillose + replace: pitted bumpy +- trait_name: seed_surface_texture + find: raised edge + replace: ribbed +- trait_name: seed_surface_texture + find: reticulate + replace: netted +- trait_name: seed_surface_texture + find: reticulate striate + replace: netted ribbed +- trait_name: seed_surface_texture + find: ribbed chartaceous + replace: ribbed papery +- trait_name: seed_surface_texture + find: rugose + replace: wrinkled +- trait_name: seed_surface_texture + find: rugose finely textured + replace: wrinkled +- trait_name: seed_surface_texture + find: rugose occasionally tuberculate + replace: wrinkled +- trait_name: seed_surface_texture + find: rugose papillose + replace: wrinkled bumpy +- trait_name: seed_surface_texture + find: rugose shallowly reticulate + replace: wrinkled netted +- trait_name: seed_surface_texture + find: rugose smooth + replace: wrinkled smooth +- trait_name: seed_surface_texture + find: rugose striate + replace: wrinkled ribbed +- trait_name: seed_surface_texture + find: rugose tuberculate + replace: wrinkled bumpy +- trait_name: seed_surface_texture + find: scabrous + replace: rough +- trait_name: seed_surface_texture + find: scalar + replace: ribbed +- trait_name: seed_surface_texture + find: scales + replace: scaly +- trait_name: seed_surface_texture + find: shalllowly reticulate + replace: netted +- trait_name: seed_surface_texture + find: shalllowly reticulate striate + replace: netted ribbed +- trait_name: seed_surface_texture + find: shallowly costate + replace: ribbed +- trait_name: seed_surface_texture + find: shallowly pitted + replace: pitted +- trait_name: seed_surface_texture + find: shallowly reticulate + replace: netted +- trait_name: seed_surface_texture + find: shallowly rugose + replace: wrinkled +- trait_name: seed_surface_texture + find: slightly rugose + replace: wrinkled +- trait_name: seed_surface_texture + find: smooth finely reticuate + replace: smooth netted +- trait_name: seed_surface_texture + find: smooth rugose + replace: smooth wrinkled +- trait_name: seed_surface_texture + find: smooth scabrous + replace: smooth rough +- trait_name: seed_surface_texture + find: smooth undulate rugose + replace: smooth wrinkled bumpy +- trait_name: seed_surface_texture + find: stellate dimpled + replace: pitted +- trait_name: seed_surface_texture + find: striate + replace: ribbed +- trait_name: seed_surface_texture + find: tuberculate + replace: bumpy +- trait_name: seed_surface_texture + find: undulate + replace: bumpy +- trait_name: seed_surface_texture + find: undulate rough + replace: rough bumpy +- trait_name: seed_surface_texture + find: very rough + replace: rough taxonomic_updates: - find: Acaena ovina replace: Acaena x ovina @@ -14845,6 +14779,10 @@ taxonomic_updates: replace: Craspedia maxgrayi reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species +- find: Epacridaceae + replace: Ericaceae sp. [Epacridaceae; ANBG_2019] + reason: Manual alignment with current family name (E. Wenk, 2023-11-19) + taxonomic_resolution: family - find: Epilobium billardieranum subsp. hydrophilum replace: Epilobium billardiereanum subsp. hydrophilum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/ATRP_2020/metadata.yml b/data/ATRP_2020/metadata.yml index 2eab3be25..bc5a36e2a 100644 --- a/data/ATRP_2020/metadata.yml +++ b/data/ATRP_2020/metadata.yml @@ -179,19 +179,10 @@ taxonomic_updates: reason: match_18. Automatic alignment with infraspecific canonical name in APNI when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Albizia sp. sir charles hardy is b.hyland 25849rfk - replace: Albizia sp. (Sir Charles Hardy Is BH 25849RFK) - reason: match_18. Automatic alignment with infraspecific canonical name in APNI - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Antirhea sp mt lewis b.gray 5733 replace: Antirhea sp. (Mt Lewis BG 5733) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: species -- find: Antirhea sp. mt lewis b.gray 5733 - replace: Antirhea sp. (Mt Lewis BG 5733) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species - find: Argyrodendron sp whitsundays w j.mcdonald 5831 replace: Argyrodendron sp. Whitsundays (W.J.McDonald+ 5831) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -246,20 +237,11 @@ taxonomic_updates: reason: match_18. Automatic alignment with infraspecific canonical name in APNI when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Derris sp. wenlock river b.hyland 21082v - replace: Derris sp. (Wenlock River BH 21082V) - reason: match_18. Automatic alignment with infraspecific canonical name in APNI - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Diospyros sp ham hill b.hyland 2941rfk replace: Diospyros sp. (Ham Hill B.Hyland 2941RFK) reason: Fuzzy match of taxon name to an APNI-listed canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Diospyros sp. ham hill b.hyland 2941rfk - replace: Diospyros sp. (Ham Hill B.Hyland 2941RFK) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species - find: Ehretia sp whitfield range r.jago 17 replace: Ehretia sp. Whitfield Range (R.Jago 17) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -294,10 +276,6 @@ taxonomic_updates: reason: Manual alignment with correct syntax, although not accepted name (E. Wenk, 2023-06-16) taxonomic_resolution: species -- find: Gossia sp. green bark b.hyland 25370rfk - replace: Gossia sp. Green Bark (B.Hyland 25370RFK) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species - find: Gynochthodes sp iron range b.hyland 11587 replace: Gynochthodes sp. iron range b.hyland 11587 reason: Exact match of the first word of the taxon name to an APC-accepted genus @@ -316,11 +294,6 @@ taxonomic_updates: reason: Fuzzy match of taxon name to an APNI-listed canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Ipomoea sp. merluna b.hyland 21374v - replace: Ipomoea sp. Merluna (B.Hyland 21374V) - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-22) - taxonomic_resolution: species - find: Lepiderema sp impulse creek a b.pollock 73 replace: Lepiderema sp. Impulse Creek (A.B.Pollock 73) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -401,11 +374,6 @@ taxonomic_updates: an unknown taxon that bears an affinity to a different taxon in the same genus and taxon can only be aligned to genus-rank (2023-11-02) taxonomic_resolution: genus -- find: Smilax sp. aff. s. elliptica - replace: Smilax sp. [Smilax sp. aff. s. elliptica] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-22) - taxonomic_resolution: genus - find: Tasmannia sp mt bellenden ker j r.clarkson 6571 replace: Tasmannia sp. Mt Bellenden Ker (J.R.Clarkson 6571) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -415,11 +383,6 @@ taxonomic_updates: reason: match_18. Automatic alignment with infraspecific canonical name in APNI when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Timonius sp. claudie river b.hyland 21096v - replace: Timonius sp. (Claudie River) - reason: match_18. Automatic alignment with infraspecific canonical name in APNI - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Tragia novaehollandiae replace: Tragia novae-hollandiae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) diff --git a/data/Britton_1994/metadata.yml b/data/Britton_1994/metadata.yml index e8d357041..1d2d83026 100644 --- a/data/Britton_1994/metadata.yml +++ b/data/Britton_1994/metadata.yml @@ -30,7 +30,7 @@ dataset: Autumn_glasshouse = ifelse(Autumn_glasshouse == "x", stringr::str_replace(Autumn_glasshouse, "x", "YYY"), "NNN"), Autumn_outdoors = ifelse(Autumn_outdoors == "x", stringr::str_replace(Autumn_outdoors, "x", "YYY"), "NNN"), Winter_glasshouse = ifelse(Winter_glasshouse == "x", stringr::str_replace(Winter_glasshouse, "x", "YYY"), "NNN"), - Winter_outdoors = ifelse(Winter_outdoors == "x", stringr::str_replace(Winter_outdoors, "x", "YYY"), "NNN"), + Winter_outdoors = ifelse(Winter_outdoors == "x", stringr::str_replace(Winter_outdoors, "x", "YYY"), "NNN"), Spring1_glasshouse = ifelse(Spring1_glasshouse == "x", stringr::str_replace(Spring1_glasshouse, "x", "YYY"), "NNN"), Spring1_outdoors = ifelse(Spring1_outdoors == "x", stringr::str_replace(Spring1_outdoors, "x", "YYY"), "NNN"), germination_glasshouse = paste0(Summer_glasshouse_A, Autumn_glasshouse, Winter_glasshouse, Spring1_glasshouse, Summer_glasshouse_B), @@ -38,7 +38,7 @@ dataset: seed_provenance = "northern New South Wales", location = "University of New England" ) - ' + ' collection_date: 1992/1993 taxon_name: Species location_name: location @@ -101,7 +101,7 @@ contexts: description: Seeds sourced from five wetlands (locally named 'lagoons') on which this study is based are located at altitudes between 1000 and 1325 m on the New England plateau in northern New South Wales, at an approximate location - of 30.65ºS, 151.50ºE + of 30.65°S, 151.50°E traits: - var_in: germination_glasshouse unit_in: .na @@ -165,10 +165,6 @@ traits: which measures radiation in the 400 to 700 nm waveband. substitutions: .na taxonomic_updates: -- find: Agrostis avenacea var avenacea - replace: Lachnagrostis filiformis - reason: Align to current APC accepted name (E. Wenk, 2023-05-29) - taxonomic_resolution: species - find: Agrostis avenacea var avenacea replace: Lachnagrostis filiformis reason: Align to current APC accepted name (E. Wenk, 2023-05-29) @@ -219,6 +215,6 @@ taxonomic_updates: taxonomic_resolution: species exclude_observations: - variable: taxon_name - find: Nitella sp., Chara sp. + find: Nitella spp., Chara spp. reason: algae questions: .na diff --git a/data/Burrows_2020/metadata.yml b/data/Burrows_2020/metadata.yml index e897b147a..1b2ec53bf 100644 --- a/data/Burrows_2020/metadata.yml +++ b/data/Burrows_2020/metadata.yml @@ -290,18 +290,10 @@ taxonomic_updates: replace: Pseudoloxocarya grossa MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2023-05-08) taxonomic_resolution: species -- find: Pseudoloxocarya grossa MS - replace: Taraxis grossa - reason: Manual alignment with accepted APC name (E. Wenk, 2023-05-08) - taxonomic_resolution: species - find: Rumex acetosa replace: Rumex acetosa reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2023-05-08) taxonomic_resolution: species -- find: Stylidium brunonianum var. brunonianum - replace: Stylidium brunonianum - reason: Manual alignment with accepted APC name (E. Wenk, 2023-05-08) - taxonomic_resolution: species exclude_observations: .na questions: .na diff --git a/data/Canham_2023/metadata.yml b/data/Canham_2023/metadata.yml index 14d71e172..d4149b04d 100644 --- a/data/Canham_2023/metadata.yml +++ b/data/Canham_2023/metadata.yml @@ -31,7 +31,7 @@ dataset: location = "Fitzroy Crossing", leaf_N_per_dry_mass = `% C`/`C:N` ) - ' + ' collection_date: 2019-06 taxon_name: Species name location_name: location diff --git a/data/Cernusak_2006/metadata.yml b/data/Cernusak_2006/metadata.yml index 3577a030e..d4b384959 100644 --- a/data/Cernusak_2006/metadata.yml +++ b/data/Cernusak_2006/metadata.yml @@ -277,7 +277,7 @@ traits: trait_name: leaf_mass_per_area entity_type: population value_type: mean - basis_of_value: literature + basis_of_value: expert_score replicates: .na methods: sourced from Chen 2002 - var_in: SW area per leaf area (cm2 m-2) diff --git a/data/Cheal_2017/metadata.yml b/data/Cheal_2017/metadata.yml index ce32b21c5..2b43547c4 100644 --- a/data/Cheal_2017/metadata.yml +++ b/data/Cheal_2017/metadata.yml @@ -38,13 +38,13 @@ dataset: resprouting_capacity_juvenile = `PERVEG V, U, W, N, X (F=inadequate data)`, resprouting_capacity = `PERVEG V, U, W, N, X (F=inadequate data)`, seedbank_longevity_categorical = ifelse(`PERSEED D, S, G, C, Z (F=inadequate data)` %in% c("S","G","C","D"), - `PERSEED D, S, G, C, Z (F=inadequate data)`, NA), + `PERSEED D, S, G, C, Z (F=inadequate data)`, NA), seedbank_longevity = ifelse(`PERSEED D, S, G, C, Z (F=inadequate data)` %in% c("S","G","C"), `PERSEED D, S, G, C, Z (F=inadequate data)`, NA), - fire_cued_seeding = ifelse(`PERSEED D, S, G, C, Z (F=inadequate data)` %in% c("S","G","C"), - "fire_cued_seeding",NA), + fire_cued_seeding = ifelse(`PERSEED D, S, G, C, Z (F=inadequate data)` %in% c("S","G","C"), + "fire_cued_seeding",NA), fire_cued_seeding = ifelse(`T, I, R, M, K (F=inadequate data)` %in% c("I","T"), - "fire_cued_seeding",fire_cued_seeding), + "fire_cued_seeding",fire_cued_seeding), fire_cued_seeding = ifelse(`PERSEED D, S, G, C, Z (F=inadequate data)` %in% c("Z"), "no_fire_cued_seeding",fire_cued_seeding), fire_cued_seeding = ifelse(`T, I, R, M, K (F=inadequate data)` %in% c("R","M"), @@ -53,7 +53,7 @@ dataset: group_by(Species) %>% mutate(across(c(`GEOPHYTE Y, N`), replace_duplicates_with_NA)) %>% ungroup() - ' + ' collection_date: unknown/2017 taxon_name: Species description: Compilation of fire response and ecological attribute data for many @@ -421,9 +421,6 @@ substitutions: - trait_name: post_fire_recruitment find: F replace: .na -- trait_name: post_fire_recruitment - find: Z - replace: .na - trait_name: post_fire_recruitment find: perveg replace: .na @@ -463,11 +460,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Agrostis aff. hiemalis - replace: Agrostis sp. [Agrostis aff. hiemalis; Cheal_2017] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Agrostis spp. agg. aff. hiemalis replace: Agrostis sp. [Agrostis sp. agg. aff. hiemalis; Cheal_2017] reason: match_09. Rewording taxon with term `affinis` preceding species epithet diff --git a/data/Clarke_2009/metadata.yml b/data/Clarke_2009/metadata.yml index 818235c39..e7e63d4e0 100644 --- a/data/Clarke_2009/metadata.yml +++ b/data/Clarke_2009/metadata.yml @@ -540,11 +540,6 @@ taxonomic_updates: reason: match_09. Rewording taxon with term `affinis` preceding species epithet to indicate a genus-level alignment with `APC accepted` genus (2022-11-22) taxonomic_resolution: genus -- find: Melaleuca sp. nov./comboynensis - replace: Melaleuca sp. nov. - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Notelaea microcarpa var. microcrpa replace: Notelaea microcarpa var. microcarpa reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/Clarke_2015/metadata.yml b/data/Clarke_2015/metadata.yml index f862b96fe..bca8c4db7 100644 --- a/data/Clarke_2015/metadata.yml +++ b/data/Clarke_2015/metadata.yml @@ -28,30 +28,30 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: no - custom_R_code: ' + custom_R_code: ' data %>% mutate( - `species records` = str_replace_all(`species records`, "_", " "), + `species records` = str_replace_all(`species records`, "_", " ") %>% stringr::str_trim(), storage_organ = ifelse(`resp.type` == "Lignotuber","lignotuber", NA) ) %>% distinct(`species records`, Ecosystem, `R+`,`S+`,`resp.type`, `Conserved R+`, `Conserved S+`) %>% - group_by(`species records`, Ecosystem) %>% - mutate( - across(c(`R+`,`S+`,`resp.type`), ~na_if(.x, "X")), - `R+` = paste(`R+`, collapse = " "), - `S+` = paste(`S+`, collapse = " "), - `resp.type` = paste(`resp.type`, collapse = " ") - ) %>% - ungroup() %>% - distinct(`species records`, Ecosystem, `R+`,`S+`,`resp.type`,`Conserved R+`, `Conserved S+`) %>% - mutate( - `R+` = ifelse(`R+` %in% c("yes NA", "NA yes", "yes yes"), "yes", `R+`), - `S+` = str_replace(`S+`, "no NA", "no"), - `S+` = ifelse(`S+` %in% c("yes NA", "NA yes", "yes yes"), "yes", `S+`), - storage_organ = ifelse(`resp.type` == "Lignotuber","lignotuber", NA), - across(c(`R+`,`S+`,`resp.type`), ~na_if(.x,"NA")) - ) - ' + group_by(`species records`, Ecosystem) %>% + mutate( + across(c(`R+`,`S+`,`resp.type`), ~na_if(.x, "X")), + `R+` = paste(`R+`, collapse = " "), + `S+` = paste(`S+`, collapse = " "), + `resp.type` = paste(`resp.type`, collapse = " ") + ) %>% + ungroup() %>% + distinct(`species records`, Ecosystem, `R+`,`S+`,`resp.type`,`Conserved R+`, `Conserved S+`) %>% + mutate( + `R+` = ifelse(`R+` %in% c("yes NA", "NA yes", "yes yes"), "yes", `R+`), + `S+` = str_replace(`S+`, "no NA", "no"), + `S+` = ifelse(`S+` %in% c("yes NA", "NA yes", "yes yes"), "yes", `S+`), + storage_organ = ifelse(`resp.type` == "Lignotuber","lignotuber", NA), + across(c(`R+`,`S+`,`resp.type`), ~na_if(.x,"NA")) + ) + ' collection_date: unknown/2015 taxon_name: species records location_name: Ecosystem @@ -250,11 +250,6 @@ substitutions: find: 'yes' replace: post_fire_recruitment taxonomic_updates: -- find: Abutilon oxycarpum f. oxycarpum - replace: Abutilon oxycarpum var. oxycarpum - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: variety - find: Abutilon oxycarpum forma oxycarpum replace: Abutilon oxycarpum reason: match_14. Automatic alignment with species-level name known by APC when @@ -487,7 +482,7 @@ taxonomic_updates: replace: Celastrus sp. [Clarke_2015] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: 'Chenopodium sp. ' +- find: Chenopodium sp. replace: Chenopodium sp. [Clarke_2015] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus @@ -516,11 +511,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-22) taxonomic_resolution: genus -- find: 'Coprosma juniperina ' - replace: Coprosma sp. [Coprosma juniperina; Clarke_2015] - reason: Exact match of the first word of the taxon name to an APC-accepted genus - (2023-11-02) - taxonomic_resolution: genus - find: Corymbia dolicharpa juvenile replace: Corymbia dolichocarpa reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name @@ -604,15 +594,6 @@ taxonomic_updates: replace: Endiandra crassiflora reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Endiandra crassifolia - replace: Endiandra crassiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: 'Endiandra crassifolia ' - replace: Endiandra crassiflora - reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation - and filler words are removed (2023-11-02) - taxonomic_resolution: species - find: Eremaea sp. replace: Eremaea sp. [Clarke_2015] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -823,11 +804,6 @@ taxonomic_updates: replace: Leptospermum sp. [Clarke_2015] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Leptospermum sp. aff. grandifolium - replace: Leptospermum sp. [Leptospermum sp. aff. grandifolium; Clarke_2015] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Leptospermum spp aff grandifolium replace: Leptospermum sp. [Leptospermum sp. aff. grandifolium; Clarke_2015] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -891,21 +867,11 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Lissanthe strigosa subsp. subuluta - replace: Lissanthe strigosa subsp. subulata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: subspecies - find: Livistona humilis X inermis replace: Livistona x [Livistona humilis x Livistona inermis] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Livistona sp. [Livistona humilis x Livistona inermis hybrid] - replace: Livistona x [Livistona humilis x Livistona inermis] - Clarke_2015] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Lophostemon suaveolans replace: Lophostemon suaveolens reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -947,17 +913,6 @@ taxonomic_updates: reason: match_09. Rewording taxon with term `affinis` preceding species epithet to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) taxonomic_resolution: genus -- find: Melaleuca sp. aff. comboynensis - replace: Melaleuca sp. [Melaleuca sp. aff. comboynensis; Clarke_2015] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-22) - taxonomic_resolution: genus -- find: 'Melaleuca sp. aff. comboynensis ' - replace: Melaleuca sp. [Melaleuca sp. aff. comboynensis; Clarke_2015] - reason: Exact match to APC genus. Taxon name includes 'affinis' or 'aff' indicating - an unknown taxon that bears an affinity to a different taxon in the same genus - and taxon can only be aligned to genus-rank (2023-11-02) - taxonomic_resolution: genus - find: Melicytus dentata replace: Melicytus dentatus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/Collette_2021/metadata.yml b/data/Collette_2021/metadata.yml index 0aea7a0d4..3870ad760 100644 --- a/data/Collette_2021/metadata.yml +++ b/data/Collette_2021/metadata.yml @@ -168,10 +168,6 @@ taxonomic_updates: reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2023-05-25) taxonomic_resolution: species - find: Brachyloma jillup - replace: Brachyloma jillup MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2023-05-25) - taxonomic_resolution: species -- find: Brachyloma jillup MS replace: Brachyloma preissii reason: Manual match to accepted APC name. (E. Wenk, 2023-05-25) taxonomic_resolution: species diff --git a/data/Cooper_2013/metadata.yml b/data/Cooper_2013/metadata.yml index 6184dcf76..30d88122c 100644 --- a/data/Cooper_2013/metadata.yml +++ b/data/Cooper_2013/metadata.yml @@ -28,29 +28,29 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( stem_growth_habit = ifelse(height=="prostrate","prostrate",NA), - plant_growth_substrate = ifelse(form %in% c("mistletoe", "epiphyte"), "epiphyte", NA), + plant_growth_substrate = ifelse(form %in% c("mistletoe", "epiphyte"), "epiphyte", NA), growth_habit = ifelse(height=="prostrate","prostrate",NA), fruit_fleshiness = fruits, fruit_dehiscence = fruits, dispersal_appendage = NA - ) %>% + ) %>% move_values_to_new_trait( "fruits", "dispersal_appendage", - c("dry & winged", "enclosed in aril"), + c("dry & winged", "enclosed in aril"), c("wings", "aril"), c("dry & winged", "enclosed in aril") ) %>% group_by(species_name) %>% mutate( - across(c(`form`, `height`, `stem diameter`, `fruits`, `dispersers`,`dispersers_simple`, `min fruit length`, `max fruit length`, `min fruit width`, `max fruti width`), + across(c(`form`, `height`, `stem diameter`, `fruits`, `dispersers`,`dispersers_simple`, `min fruit length`, `max fruit length`, `min fruit width`, `max fruti width`), replace_duplicates_with_NA), observation_num = row_number() ) %>% ungroup() - ' + ' collection_date: unknown/2013 taxon_name: species_name description: transcription of data in Australian Rainforest Fruits @@ -885,15 +885,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Aneilema sp. Tower LA (P.I.Forster +PIF14846) - replace: Aneilema sp. Tower LA (P.I.Forster+ PIF14846) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Aneilema sp. Tower LA (P.I.Forster +PIF14846) Qld Herbarium - replace: Aneilema sp. (Tower LA P.I.Forster+ PIF14846) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Antirhea (Mt Lewis) replace: Antirhea sp. Mt Misery (L.W.Jessup+ GJD3136) reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -970,14 +961,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Argyrodendron sp. Mt Haig ( L.S.Smith+ 14307) - replace: Argyrodendron sp. Mt Haig (L.S.Smith+ 14307) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK 1106) - replace: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK1106) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Argyrodendron trifolioratum replace: Argyrodendron trifoliolatum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1212,10 +1195,6 @@ taxonomic_updates: replace: Ceratopetalum succirubrum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Chionanthus sp. [Linociera sp. (Little Pine LA BH 2520RFK)] - replace: Linociera sp. (Little Pine LA BH 2520RFK) - reason: Manual alignment to canonical name in APNI (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Chrysanthemoides monilifera rotundata replace: Chrysanthemoides monilifera subsp. rotundata reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -1507,11 +1486,6 @@ taxonomic_updates: reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name in APC known when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Ehretia sp. Whitfield Range (R.Jago 17) Qld Herbarium - replace: Ehretia sp. (Whitfield Range) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Elaeocarpus (Minyon) replace: Elaeocarpus sp. Minyon reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) @@ -1702,11 +1676,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Garcinia sp. Claudie River (L.J.Brass 19658) Qld Herbarium - replace: Garcinia sp. Claudie River (L.J.Brass 19658) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Gaultheria (Point Lookout) replace: Gaultheria sp. Point Lookout (J.B.Williams NE37757) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -1803,11 +1772,6 @@ taxonomic_updates: replace: Guilfoylia monostylis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Gynochthodes sp. (Hinchinbrook Island) - replace: Gynochthodes sp. (Hinchinbrook Island A.S.Thorsborne+ 337) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Gynochtodes (Hinchinbrook Island) replace: Gynochthodes sp. (Hinchinbrook Island A.S.Thorsborne+ 337) reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name @@ -1818,11 +1782,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Gynochtodes sp. (Hinchinbrook Island) - replace: Gynochthodes sp. (Hinchinbrook Island A.S.Thorsborne+ 337) - reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name - in APC known when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Haplostichanthus (Cooper Creek) replace: Haplostichanthus sp. (Cooper Creek BG 2433) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -1857,10 +1816,6 @@ taxonomic_updates: replace: Heterostemma acuminatum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Hibiscus (Macrostelia sp. (Bolt Head BG 6853)) - replace: Macrostelia sp. (Bolt Head BG 6853) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Hibiscus divarticatus replace: Hibiscus divaricatus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1919,11 +1874,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Ilex sp. Gadgarra (B.P.Hyland RFK 2011) Qld Herbarium - replace: Ilex sp. 'Gadgarra' (B.P.Hyland RFK 2011) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Indiofera suffruticosa replace: Indigofera suffruticosa reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -2110,11 +2060,6 @@ taxonomic_updates: notes are ignored (2022-11-10) taxonomic_resolution: species - find: Mesua (Boonjee) - replace: Mesua sp. (Boonjee AKI 1218) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Mesua sp. Boonjee (A.K. Irvine 1218) replace: Mesua sp. Boonjie (A.K.Irvine 1218) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species @@ -2360,14 +2305,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Polyosma sp. (Mt Bellenden Ker BH 2524RFK) - replace: Polyosma sp. (Mt Bellenden Ker BH 2524RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Polyosma sp. Mt Lewis (B.Hyland RFK25241) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Polyscias macgilivrayi replace: Polyscias macgillivrayi reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -2484,11 +2421,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Quassia sp. [Quassia sp. nov.] - replace: Samadera sp. [Quassia sp. [Quassia sp. nov.]; Cooper_2013] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-10) - taxonomic_resolution: genus - find: Quassia sp. aff. bidwillii replace: Samadera sp. [Quassia sp. aff. bidwillii; Cooper_2013] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -2605,10 +2537,6 @@ taxonomic_updates: replace: Rostellularia adscendens reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811) - replace: Gen. (AQ520454) sp. Shute Harbour (D.A.Halford Q811) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Rubus moluccanus moluccanus replace: Rubus moluccanus var. moluccanus reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -2619,10 +2547,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: variety -- find: Samadera sp. Mt Goonanaman (J.Randall 738) - replace: Samadera sp. Mt Goonaneman (J.Randall 738) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Sambucus canadnsis replace: Sambucus canadensis reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) @@ -2714,10 +2638,6 @@ taxonomic_updates: replace: Stenocarpus cryptocarpus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Stenocarpus sp. Hinchinbrook Is. (F.D.Hocking AQ229860) - replace: Stenocarpus sp. Hinchinbrook Is. (F.D.Hockings AQ229860) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Stephania (Bamaga) replace: Stephania sp. (Bamaga L.S.Smith AQ170418) reason: match_14. Automatic alignment with species-level name known by APC when @@ -3027,10 +2947,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Xylosma sp. Mt Lewis (G.Sankowsky 1108) - replace: Xylosma sp. Mt Lewis (G.Sankowsky+ 1108) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Xylosma terrereginae replace: Xylosma terrae-reginae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/Crowley_2007/metadata.yml b/data/Crowley_2007/metadata.yml index 0838e9cff..5c2f307f2 100644 --- a/data/Crowley_2007/metadata.yml +++ b/data/Crowley_2007/metadata.yml @@ -1245,9 +1245,5 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2023-06-18) taxonomic_resolution: species -exclude_observations: -- variable: taxon_name - find: Peltophorum africanum - reason: These taxa are non-native, non-naturalised species that do not appear in - the APC/APNI and all taxa looked up in POWO have non-Australian distributions. +exclude_observations: .na questions: .na diff --git a/data/Dong_2017/metadata.yml b/data/Dong_2017/metadata.yml index ba1415f3d..dc8572094 100644 --- a/data/Dong_2017/metadata.yml +++ b/data/Dong_2017/metadata.yml @@ -40,9 +40,9 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% filter(Species != "decurrens/ heliosperma") %>% - group_by(Genus_species) %>% + group_by(Genus_species) %>% mutate(across(c(Nfixer), replace_duplicates_with_NA)) %>% ungroup() ' @@ -575,11 +575,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: variety -- find: Ptilotus obovatus subsp. obovatus - replace: Ptilotus obovatus var. obovatus - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: variety - find: Rhagodia paradoxa replace: Rhagodia parabolica reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in diff --git a/data/Dwyer_2017/metadata.yml b/data/Dwyer_2017/metadata.yml index 6d41f932e..f71dfe4fd 100644 --- a/data/Dwyer_2017/metadata.yml +++ b/data/Dwyer_2017/metadata.yml @@ -25,14 +25,14 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% - group_by(species, remnant) %>% + data %>% + group_by(species, remnant) %>% mutate( - count_plants = sum(count), - seed_mass = round(seed_mass,6), - max_height = round(max_height,6), + count_plants = sum(count), + seed_mass = round(seed_mass,6), + max_height = round(max_height,6), specific_leaf_area = round(specific_leaf_area,6) - ) %>% + ) %>% mutate( across(c(count_plants, max_height, specific_leaf_area), replace_duplicates_with_NA) ) %>% @@ -334,6 +334,6 @@ taxonomic_updates: taxonomic_resolution: species exclude_observations: - variable: taxon_name - find: Unk sp1, Unk sp12, Unk sp13, Unk sp2, Unk sp3, Unk sp5, Unk sp7, Unk sp9 + find: unk sp1, unk sp12, unk sp13, unk sp2, unk sp3, unk sp5, unk sp7, unk sp9 reason: omitting completely unknown taxa (E Wenk, 2022.02.24) questions: .na diff --git a/data/Ellsworth_2015/metadata.yml b/data/Ellsworth_2015/metadata.yml index 1d1cd4ca5..2fc2d970c 100644 --- a/data/Ellsworth_2015/metadata.yml +++ b/data/Ellsworth_2015/metadata.yml @@ -1194,6 +1194,10 @@ taxonomic_updates: replace: Syncarpia glomulifera reason: manual change to correct typo (E. Wenk 2023-05-01) taxonomic_resolution: species +- find: Liquidambar styraciflua + replace: Liquidambar styraciflua + reason: Maintaining commonly measured non-native taxon (E. Wenk, 2023-11-19) + taxonomic_resolution: species exclude_observations: .na questions: additional_traits: leaf inorganic P diff --git a/data/Enright_2014/metadata.yml b/data/Enright_2014/metadata.yml index 1d5a20b84..b1bf35ede 100644 --- a/data/Enright_2014/metadata.yml +++ b/data/Enright_2014/metadata.yml @@ -22,8 +22,8 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% - group_by(taxon_name) %>% + data %>% + group_by(taxon_name) %>% mutate( soilCanopy = replace_duplicates_with_NA(soilCanopy), resprouter = replace_duplicates_with_NA(resprouter) @@ -794,6 +794,6 @@ taxonomic_updates: taxonomic_resolution: genus exclude_observations: - variable: taxon_name - find: UnkGen sp. + find: unkGen sp. reason: insufficient resolution questions: .na diff --git a/data/Everingham_2020/metadata.yml b/data/Everingham_2020/metadata.yml index e94619114..d30ff9fd2 100644 --- a/data/Everingham_2020/metadata.yml +++ b/data/Everingham_2020/metadata.yml @@ -109,8 +109,8 @@ dataset: applied at c. 200 mL of fertiliser per 75 L of soil. All plants were grown with adequate water supplied by overhead sprinklers and ambient light conditions in a glasshouse at UNSW, Sydney. - basis_of_record: lab, field - life_stage: seedling, adult + basis_of_record: lab field + life_stage: seedling adult original_file: SE_Germination Data.xls, SE_LMA data.xls, SE_Photosynthesis data.xls, SE_Seed dimension data.xls, SE_Seed mass data.xls, and SE_stem density data.xls, submitted by author and archived in raw data folder diff --git a/data/Fonseca_2000/metadata.yml b/data/Fonseca_2000/metadata.yml index 0e45515ac..0cfefb7bd 100644 --- a/data/Fonseca_2000/metadata.yml +++ b/data/Fonseca_2000/metadata.yml @@ -50,17 +50,17 @@ dataset: "Livistona australis", "Kennedia rubicunda", "Alpinia caerulea", "Ripogonum fawcettianum", "Brachychiton acerifolius", "Blechnum cartilagineum"), `TRAIT Leaf Size UNITS mm2`, NA), - `TRAIT Leaf Size UNITS mm2` = ifelse(name_original %in% c("Acacia deanei", + `TRAIT Leaf Size UNITS mm2` = ifelse(name_original %in% c("Acacia deanei", "Livistona australis", "Kennedia rubicunda", "Alpinia caerulea", "Ripogonum fawcettianum", "Brachychiton acerifolius", "Blechnum cartilagineum"), NA, `TRAIT Leaf Size UNITS mm2`), - leaflet_dry_mass = ifelse(name_original %in% c("Acacia deanei", - "Livistona australis", "Kennedia rubicunda", "Alpinia caerulea", - "Ripogonum fawcettianum", "Brachychiton acerifolius", + leaflet_dry_mass = ifelse(name_original %in% c("Acacia deanei", + "Livistona australis", "Kennedia rubicunda", "Alpinia caerulea", + "Ripogonum fawcettianum", "Brachychiton acerifolius", "Blechnum cartilagineum"), `TRAIT Leaf Dry Mass UNITS g`, NA), - `TRAIT Leaf Dry Mass UNITS g` = ifelse(name_original %in% c("Acacia deanei", - "Livistona australis", "Kennedia rubicunda", "Alpinia caerulea", - "Ripogonum fawcettianum", "Brachychiton acerifolius", + `TRAIT Leaf Dry Mass UNITS g` = ifelse(name_original %in% c("Acacia deanei", + "Livistona australis", "Kennedia rubicunda", "Alpinia caerulea", + "Ripogonum fawcettianum", "Brachychiton acerifolius", "Blechnum cartilagineum"), NA, `TRAIT Leaf Dry Mass UNITS g`), plant_growth_substrate = ifelse(`TRAIT Growth Form CATEGORICAL EP epiphyte (mistletoe) F fern G grass H herb S shrub T tree V vine` == "EP", "epiphyte", NA) ) @@ -1043,20 +1043,20 @@ taxonomic_updates: taxonomic_resolution: genus exclude_observations: - variable: taxon_name - find: Unk10_1 sp., Unk10_1a sp., Unk12_1a sp., Unk12_1b sp., Unk12_1c sp., Unk13_1 sp., - Unk16_18 sp., Unk16_19 sp., Unk16_4 sp., Unk17_13 sp., Unk17_4 sp., Unk2_1 sp., Unk25_1 - sp., Unk25_10 sp., Unk25_6 sp., Unk25_9 sp., Unk26_3 sp., Unk29_15 sp., Unk29_17 sp., - Unk29_18 sp., Unk29_19 sp., Unk29_25 sp., Unk30_5 sp., Unk31_12 sp., Unk31_15 sp., Unk31_8 - sp., Unk32_2 sp., Unk33_7 sp., Unk34_13 sp., Unk36_1 sp., Unk36_14 sp., Unk36_15 sp., - Unk36_16 sp., Unk36_17 sp., Unk36_18 sp., Unk36_20 sp., Unk37_21 sp., Unk37_24 sp., - Unk38_29 sp., Unk4_1 sp., Unk4_1a sp., Unk4_1b sp., Unk43_24 sp., Unk44_33 sp., Unk44_39 - sp., Unk45_10 sp., Unk45_12 sp., Unk45_17 sp., Unk45_23 sp., Unk45_29 sp., Unk45_33 - sp., Unk45_34 sp., Unk45_36 sp., Unk45_38 sp., Unk45_4 sp., Unk45_40 sp., Unk45_43 sp., - Unk45_44 sp., Unk45_46 sp., Unk45_8 sp., Unk45_9 sp., Unk47_22 sp., Unk47_28 sp., Unk47_3 - sp., Unk47_35 sp., Unk47_39 sp., Unk47_4 sp., Unk47_54 sp., Unk47_56 sp., Unk48_26 sp., - Unk48_27 sp., Unk48_31 sp., Unk48_42 sp., Unk48_44 sp., Unk48_45 sp., Unk48_51 sp., - Unk48_57 sp., Unk48_61 sp., Unk48_63 sp., Unk48_64 sp., Unk48_67 sp., Unk48_68 sp., - Unk48_69 sp., Unk48_70 sp., Unk48_71 sp., Unk48_72 sp., Unk50_30 sp., Unk50_47 sp., - Unk7_11 sp., Unk8_1 sp. + find: unk10_1 sp, unk10_1a sp, unk12_1a sp, unk12_1b sp, unk12_1c sp, unk13_1 sp, + unk16_18 sp, unk16_19 sp, unk16_4 sp, unk17_13 sp, unk17_4 sp, unk2_1 sp, unk25_1 + sp, unk25_10 sp, unk25_6 sp, unk25_9 sp, unk26_3 sp, unk29_15 sp, unk29_17 sp, + unk29_18 sp, unk29_19 sp, unk29_25 sp, unk30_5 sp, unk31_12 sp, unk31_15 sp, unk31_8 + sp, unk32_2 sp, unk33_7 sp, unk34_13 sp, unk36_1 sp, unk36_14 sp, unk36_15 sp, + unk36_16 sp, unk36_17 sp, unk36_18 sp, unk36_20 sp, unk37_21 sp, unk37_24 sp, + unk38_29 sp, unk4_1 sp, unk4_1a sp, unk4_1b sp, unk43_24 sp, unk44_33 sp, unk44_39 + sp, unk45_10 sp, unk45_12 sp, unk45_17 sp, unk45_23 sp, unk45_29 sp, unk45_33 + sp, unk45_34 sp, unk45_36 sp, unk45_38 sp, unk45_4 sp, unk45_40 sp, unk45_43 sp, + unk45_44 sp, unk45_46 sp, unk45_8 sp, unk45_9 sp, unk47_22 sp, unk47_28 sp, unk47_3 + sp, unk47_35 sp, unk47_39 sp, unk47_4 sp, unk47_54 sp, unk47_56 sp, unk48_26 sp, + unk48_27 sp, unk48_31 sp, unk48_42 sp, unk48_44 sp, unk48_45 sp, unk48_51 sp, + unk48_57 sp, unk48_61 sp, unk48_63 sp, unk48_64 sp, unk48_67 sp, unk48_68 sp, + unk48_69 sp, unk48_70 sp, unk48_71 sp, unk48_72 sp, unk50_30 sp, unk50_47 sp, + unk7_11 sp, unk8_1 sp reason: omitting completely unknown taxa (E Wenk, 2022.02.24) questions: .na diff --git a/data/Funk_2016/metadata.yml b/data/Funk_2016/metadata.yml index eeaf603f6..3e1cb0c70 100644 --- a/data/Funk_2016/metadata.yml +++ b/data/Funk_2016/metadata.yml @@ -173,7 +173,7 @@ traits: trait_name: .na entity_type: species value_type: mean - basis_of_value: literature + basis_of_value: measurement replicates: .na methods: for various published sources, in particular the Kew botanic garden seed database; not mapped into AusTraits, since we have the Kew seed database as its diff --git a/data/Gallagher_2012/metadata.yml b/data/Gallagher_2012/metadata.yml index 8c7fe4523..ab3a18235 100644 --- a/data/Gallagher_2012/metadata.yml +++ b/data/Gallagher_2012/metadata.yml @@ -97,7 +97,7 @@ traits: trait_name: leaf_mass_per_area entity_type: population value_type: mean - basis_of_value: literature + basis_of_value: measurement replicates: unknown measurement_remarks: remarks_for_SLA methods: unknown @@ -107,7 +107,7 @@ traits: trait_name: seed_dry_mass entity_type: population value_type: mean - basis_of_value: literature + basis_of_value: measurement replicates: unknown methods: field collections Garreth Kyle (data source 48), Janet Lake (data source 49), and Michelle Leishman (data source 50) at Macquarie University; and from @@ -118,7 +118,7 @@ traits: trait_name: leaf_area entity_type: population value_type: mean - basis_of_value: literature + basis_of_value: measurement replicates: unknown methods: data from Gallagher littoral rainforest survey (data source 15) basis_of_record: field diff --git a/data/Gallagher_2015/metadata.yml b/data/Gallagher_2015/metadata.yml index 4ec171dad..5c39d09d9 100644 --- a/data/Gallagher_2015/metadata.yml +++ b/data/Gallagher_2015/metadata.yml @@ -91,11 +91,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus caesia subsp. 'Southern rocks' - replace: Eucalyptus caesia - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus caesia subsp. 'Southern' replace: Eucalyptus caesia reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -120,16 +115,6 @@ taxonomic_updates: reason: Manual alignment with canonical name with rank `subspecies` in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: subspecies -- find: Eucalyptus dalrympleana subsp. Tasmania - replace: Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923) - reason: Manual alignment with canonical name with rank `subspecies` in APC (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: subspecies -- find: Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923) - replace: Eucalyptus dalrympleana - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Eucalyptus grandis subsp. 'North Qld' replace: Eucalyptus grandis reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -150,11 +135,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus horistes subsp. Southern smooth - replace: Eucalyptus horistes - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus incrassata (obconic-fruited form) replace: Eucalyptus incrassata reason: match_14. Automatic alignment with species-level name known by APC when @@ -184,21 +164,6 @@ taxonomic_updates: reason: Manual alignment with canonical name with rank `subspecies` in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: subspecies -- find: Eucalyptus mannifera subsp. Alpine Victoria - replace: Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066) - reason: Manual alignment with canonical name with rank `subspecies` in APC (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: subspecies -- find: Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066) - replace: Eucalyptus mannifera - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Eucalyptus microcarpa [Adelaide Variant] - replace: Eucalyptus microcarpa 'Adelaide Variant' - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus moorei subsp. 'latiuscula' replace: Eucalyptus moorei var. latiuscula reason: match_06. Automatic alignment with synonymous term among known canonical @@ -247,11 +212,6 @@ taxonomic_updates: replace: Eucalyptus sp. Battlecamp (Nicolle 1789) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Eucalyptus sp. Cable Haul Road - replace: Eucalyptus sp. Cable Haul Road (Nicolle 6956 & French) - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: species - find: Eucalyptus sp. Dartmoor replace: Eucalyptus sp. Dartmoor (D.Nicolle & M.French DN 5585) reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -289,10 +249,6 @@ taxonomic_updates: replace: Eucalyptus sp. Kitchener (Nicolle 6958 & French 6958) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species -- find: Eucalyptus sp. Kitchener (Nicolle 6958 & French 6958) - replace: Eucalyptus sp. Kitchener (Nicolle 6958 & French 6958) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Eucalyptus sp. Lake Magenta replace: Eucalyptus sp. Lake Magenta (D.Nicolle & M.French DN 5509) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -321,11 +277,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus sp. Mulga Rock (K.D.Hill & L.A.S.Johnson KH 2668) NSW Herbarium - replace: Eucalyptus sp. Mulga Rock (K.D.Hill & L.A.S.Johnson KH 2668) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus sp. North Balladonia replace: Eucalyptus sp. North Balladonia (D.Nicolle & M.French DN 3620) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -339,10 +290,6 @@ taxonomic_updates: replace: Eucalyptus sp. South Newdegate Lakes (Nicolle & French 6021) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Eucalyptus sp. South Newdegate lakes - replace: Eucalyptus sp. South Newdegate Lakes (Nicolle & French 6021) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Eucalyptus sp. Southern wheatbelt replace: Eucalyptus sp. Southern wheatbelt (D.Nicolle & M.French DN 5507) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted diff --git a/data/Groom_1997/metadata.yml b/data/Groom_1997/metadata.yml index 3f5b69db1..9051b0af0 100644 --- a/data/Groom_1997/metadata.yml +++ b/data/Groom_1997/metadata.yml @@ -235,10 +235,6 @@ taxonomic_updates: replace: Hakea cygnus subsp. needlei reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: subspecies -- find: Hakea cygna subsp. needlei - replace: Hakea cygnus subsp. needlei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: subspecies - find: Hakea fran coriacea replace: Hakea coriacea reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) diff --git a/data/Gross_2005/data.csv b/data/Gross_2005/data.csv index 84845aadf..a5e87f089 100644 --- a/data/Gross_2005/data.csv +++ b/data/Gross_2005/data.csv @@ -1,10 +1,10 @@ Family ,Species,Status,Fruit type,Sex type,Code,Source Actinidiaceae,Saurauia andreana ,n,"fleshy, indeh",bi,1,Hyland et al. (2003) Agavaceae,Pleomele angustifolia ,n,berry,bi,1,Pedley (1986) -Anacardiaceae,Blepharocarya involucrigera ,e,drupe,dio,2,Jessup (1985) -Anacardiaceae,Buchanania arborescens ,n,drupe,bi,1,Jessup (1985) -Anacardiaceae,Buchanania mangoides ,e,drupe,bi,1,Jessup (1985) -Anacardiaceae,Buchanania obovata ,e,drupe,bi,1,Jessup (1985) +Anacardiaceae,Blepharocarya involucrigera ,e,drupe,dio,2,Jessup (1985) +Anacardiaceae,Buchanania arborescens ,n,drupe,bi,1,Jessup (1985) +Anacardiaceae,Buchanania mangoides ,e,drupe,bi,1,Jessup (1985) +Anacardiaceae,Buchanania obovata ,e,drupe,bi,1,Jessup (1985) Anacardiaceae,Euroschinus falcata var. falcata ,e,drupe,mono,3,"Morialty 2554, QRS" Anacardiaceae,Pleiogynium timorense ,n,drupe,dio,2,Jessup (1985) Anacardiaceae,Rhus taitensis ,n,drupe,dio,2,Jessup (1985) @@ -16,8 +16,8 @@ Annonaceae,Haplostichanthus johnsonii ,e,berry,bi,1,Hyland et al. (2003) Annonaceae,Haplostichanthus sp. (Johnstone River LWJ 471) ,e,berry,bi ,1,Hyland et al. (2003). Annonaceae,Meiogyne cilindrocarpa ,n,berry,bi,1,Hyland et al. (2003) Annonaceae,Miliusa brahei ,e,berry,bi,1,Hyland et al. (2003) -Annonaceae,Miliusa horsfieldii ,n,berry,bi,1,Hyland et al. (2003) -Annonaceae,Miliusa traceyi ,e,berry,bi,1,Hyland et al. (2003) +Annonaceae,Miliusa horsfieldii ,n,berry,bi,1,Hyland et al. (2003) +Annonaceae,Miliusa traceyi ,e,berry,bi,1,Hyland et al. (2003) Annonaceae,Mitrephora zippelliana ,n,berry,bi,1,Hyland et al. (2003) Annonaceae,Polyalthia australis ,e,berry,bi,1,Hyland et al. (2003) Annonaceae,Polyalthia michaelii ,e,berry,bi,1,Hyland et al. (2003) @@ -25,8 +25,8 @@ Annonaceae,Polyalthia nitidissima ,n,berry,bi,1,Hyland et al. (2003) Annonaceae,Polyalthia ssp. (Wyvuri BH 2632RFK) ,e,berry,bi,1,Hyland et al. (2003) Annonaceae,Polyaulax ssp. (Tingle Scrub DGF 2676) ,e,berry,bi,1,Hyland et al. (2003) Annonaceae,Pseuduvaria froggattii ,e,"fleshy, indeh",dio,2,Jessup (1987) -Annonaceae,Pseuduvaria hylandii ,e,berry,dio,2,Jessup (1987) -Annonaceae,Pseuduvaria mulgraveana var. glabrescens ,e,berry,dio,2,Jessup (1987) +Annonaceae,Pseuduvaria hylandii ,e,berry,dio,2,Jessup (1987) +Annonaceae,Pseuduvaria mulgraveana var. glabrescens ,e,berry,dio,2,Jessup (1987) Annonaceae,Xylopia maccreae ,e,follicles,bi,1,Hyland et al. (2003) Annonaceae,Xylopia ssp. (B. Homestead CD CC173) ,e,follicles,bi,1,"flowers not seen, estimated to be bisexual." Apocynaceae,Alstonia actinophylla ,n,follicles,bi,1,Forster (1996) @@ -36,9 +36,9 @@ Apocynaceae,Alstonia scholaris ,n,follicles,bi,1,Forster (1996) Apocynaceae,Alstonia spectabilis ssp. ophioxyloides ,n,follicles,bi,1,Forster (1996) Apocynaceae,Alstonia spectabilis ssp. spectabilis ,e,follicles,bi,1,Forster (1996) Apocynaceae,Alyxia orophila ,e,drupe,bi,1,Forster (1996) -Apocynaceae,Cerbera floribunda ,n,drupe,bi,1,Forster (1996) -Apocynaceae,Cerbera inflata ,e,drupe,bi,1,Forster (1996) -Apocynaceae,Cerbera manghas ,n,drupe,bi,1,Forster (1996) +Apocynaceae,Cerbera floribunda ,n,drupe,bi,1,Forster (1996) +Apocynaceae,Cerbera inflata ,e,drupe,bi,1,Forster (1996) +Apocynaceae,Cerbera manghas ,n,drupe,bi,1,Forster (1996) Apocynaceae,Kopsia arborea ,n,drupe,bi,1,Forster (1996) Apocynaceae,Neisosperma poweri ,e,drupe,bi,1,Forster (1996) Apocynaceae,Tabemaemontana pubescens ,n,follicles,bi,1,Forster (1996) @@ -50,9 +50,9 @@ Aquifoliaceae,Ilex arnhemensis ssp. arnhemensis ,n,drupe,dio,2,Pedley (1984) Aquifoliaceae,Ilex arnhemensis ssp. ferdinandi ,e,drupe,dio,2,Pedley (1984) Aquifoliaceae,Ilex ssp. (Gadgarra BH 2011RFK) ,e,drupe,dio?,2,"females not seen, estimated to be dioecious" Aquifoliaceae,Sphenostemon lobosporus ,e,drupe,dio,2,Pedley (1984) -Araliaceae,Delarbrea michieana ,e,drupe,mono,3,Lowry (1986) -Araliaceae,Gastonia spectabilis ,n,drupe,bi,1,Hyland et al. (2003) -Araliaceae,Polyscias australiana ,n,drupe,bi,1,Hyland et al. (2003) +Araliaceae,Delarbrea michieana ,e,drupe,mono,3,Lowry (1986) +Araliaceae,Gastonia spectabilis ,n,drupe,bi,1,Hyland et al. (2003) +Araliaceae,Polyscias australiana ,n,drupe,bi,1,Hyland et al. (2003) Araliaceae,Polyscias bellendenkerensis ,e,drupe,bi,1,Hyland et al. (2003) Araliaceae,Polyscias elegans ,n,drupe,mono,3,"Gray 4470, QRS" Araliaceae,Polyscias mollis ,e,drupe,dio,2,Hyland et al. (2003) @@ -61,21 +61,21 @@ Araliaceae,Polyscias nodosa ,n,drupe,bi,1,Hyland et al. (2003) Araliaceae,Polyscias willmottii ,e,drupe,bi,1,Hyland et al. (2003) Araliaceae,Schefflera actinophylla ,n,drupe,bi,1,Hyland et al. (2003) Araliaceae,Schefflera bractescens ,n,drupe,bi,1,"Hyland 9521, QRS" -Balanopaceae,Balanops australiana ,e,"pyrenes, fleshy",dio,2,Carlquist (1989) +Balanopaceae,Balanops australiana ,e,"pyrenes, fleshy",dio,2,Carlquist (1989) Bignoniaceae,Deplanchea tetraphylla ,n,capsule,bi,1,Hyland et al. (2003) Bixaceae,Cochlospermum gillivraei ssp. gillivraei ,n,capsule,bi,1,George (1982) -Boraginaceae,Cordia dichotoma ,n,drupe,dio,2,Johnston (1951) -Boraginaceae,Cordia subcordata ,n,drupe,bi,1,Johnston (1951) +Boraginaceae,Cordia dichotoma ,n,drupe,dio,2,Johnston (1951) +Boraginaceae,Cordia subcordata ,n,drupe,bi,1,Johnston (1951) Boraginaceae,Ehretia acuminata ,n,drupe,bi,1,Hyland et al. (2003) Boraginaceae,Ehretia membranifolia ,e,drupe,bi,1,Hyland et al. (2003) Brassicaceae (Capparaceae),Capparis arborea ,e,berry,bi,1,"Hewson (1982), FOA 8" Brassicaceae (Capparaceae),Capparis sp. (Forty Mile Scrub BH 3883RFK) ,e,berry,bi,1,Hyland et al. (2003) Brassicaceae (Capparaceae),Crateva religiosa ,n,berry,bi,1,Hewson (1982) Burseraceae,Canarium acutifolium ,n,drupe,dio,2,Hyland et al. (2003) -Burseraceae,Canarium australasicum ,e,drupe,dio,2,Hewson (1985) -Burseraceae,Canarium australianum var. australianum ,n,drupe,dio,2,Hewson (1985) -Burseraceae,Canarium muelleri ,e,drupe,dio,2,Hewson (1985) -Burseraceae,Canarium vitiense ,n,drupe,dio,2,Hewson (1985) +Burseraceae,Canarium australasicum ,e,drupe,dio,2,Hewson (1985) +Burseraceae,Canarium australianum var. australianum ,n,drupe,dio,2,Hewson (1985) +Burseraceae,Canarium muelleri ,e,drupe,dio,2,Hewson (1985) +Burseraceae,Canarium vitiense ,n,drupe,dio,2,Hewson (1985) Burseraceae,Garuga floribunda ,n,drupe,bi,1,Hewson (1985) Calycanthaceae (Idiospermaceae),Idiospermum australiense ,e,drupe,mono,3,Worboys (in press) Casuarinaceae,Allocasuarina torulosa ,e,samara,dio,2,Wilson and Johnson (1989) @@ -135,8 +135,8 @@ Combretaceae,Terminalia platyptera,,"pseudocarp, dry",mono,3,"Clarkson 4246A, QR Combretaceae,Terminalia sericocarpa ,e,"pseudocarp, dry",mono,3,"Hyland 5634, QRS" Combretaceae,Terminalia subacroptera ,n,"pseudocarp, dry",mono,3,"Hyland 7978, QRS" Cornaceae (Alangiaceae),Alangium ssp. (Claudie Riv. BH2682RFK) ,e,drupe,bi,4,Not resolved -Cornaceae (Alangiaceae),Alangium villosum ssp. polyosmoides ,n,drupe,bi,1,Hewson (1984) -Cornaceae (Alangiaceae),Alangium villosum ssp. tomentosum ,n,drupe,bi,1,Hewson (1984) +Cornaceae (Alangiaceae),Alangium villosum ssp. polyosmoides ,n,drupe,bi,1,Hewson (1984) +Cornaceae (Alangiaceae),Alangium villosum ssp. tomentosum ,n,drupe,bi,1,Hewson (1984) Corynocarpaceae,Corynocarpus cribbianus ,n,drupe,bi,1,Guymer (1984) Cunoniaceae,Acsmithia davidsonii ,e,follicles,bi,1,Hoogland 1979b; Hyland et al. (2003) Cunoniaceae,Caldcluvia australiensis ,e,capsule,bi,1,Hoogland 1979; Hyland et al. (2003) @@ -147,7 +147,7 @@ Cunoniaceae,Ceratopetalum ssp. (Mt Spurgeon BH 1501RFK) ,e,indeh. capsule,bi,1,H Cunoniaceae,Ceratopetalum succirubrum ,n,nut,bi,1,Rozefelds & Barnes (2002) Cunoniaceae,Ceratopetalum virchowii ,e,nut,bi,1,Rozefelds & Barnes (2002) Cunoniaceae,Davidsonia pruriens ,e,drupe,bi,1,Harden and Williams (2000) -Cunoniaceae,Geissois biagiana ,e,capsule,bi,1,Schimanski and Rosefelds (2002) +Cunoniaceae,Geissois biagiana ,e,capsule,bi,1,Schimanski and Rosefelds (2002) Cunoniaceae,Gillbeea adenopetala ,e,samara,bi,1,Hyland et al. (2003) Cunoniaceae,Pseudoweinmannia lachnocarpa ,e,capsule,bi,1,Hyland et al. (2003) Cunoniaceae,Pullea stutzeri ,e,nut,bi,1,Hyland et al. (2003) @@ -155,15 +155,15 @@ Cunoniaceae,Schizomeria ovata ,e,drupe,bi,1,Hyland et al. (2003); Hufford and D Cunoniaceae,Schizomeria whitei ,e,drupe,mono,3,Hyland et al. (2003); Hufford and Dickison 1992 Datiscaceae,Tetrameles nudiflora ,n,capsule,dio,2,van Steenis (1953) Dilleniaceae,Dillenia alata ,n,capsule,bi,1,Hyland et al. (2003) -Ebenaceae,Diospyros calycantha ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros compacta ,e,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros cupulosa ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros fasciculosa ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros geminata ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros hebecarpa ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros humilis ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros maritima ,n,berry,dio,2,Hyland et al. (2003) -Ebenaceae,Diospyros pentamera ,e,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros calycantha ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros compacta ,e,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros cupulosa ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros fasciculosa ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros geminata ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros hebecarpa ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros humilis ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros maritima ,n,berry,dio,2,Hyland et al. (2003) +Ebenaceae,Diospyros pentamera ,e,berry,dio,2,Hyland et al. (2003) Ebenaceae,Diospyros ssp. (Baird LA BH 9374) ,e,berry,dio,2,Hyland et al. (2003) Ebenaceae,Diospyros ssp. (Mt Lewis LSS 10107) ,e,berry,dio,2,Hyland et al. (2003) Ebenaceae,Diospyros ssp. (Mt Spurgeon CTW 10677) ,e,berry,dio,2,Hyland et al. (2003) @@ -172,25 +172,25 @@ Ebenaceae,Diospyros ssp. (Swipers LA BH 1984RFK) ,e,berry,dio,2,"females not see Elaeocarpaceae,Aceratium concinnum ,e,drupe,bi,1,Morley and Toelken (1983) for the family Elaeocarpaceae,Aceratium doggrellii ,e,drupe,bi,1,Morley and Toelken (1983) for the family Elaeocarpaceae,Aceratium ferrugineum ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Aceratium megalospermum ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Aceratium megalospermum ,e,drupe,bi,1,Morley and Toelken (1983) for the family Elaeocarpaceae,Aceratium sericoleopsis ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus angustifolius ,n,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus arnhemicus ,n,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus bancroftii ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus carolinae ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus coorangooloo ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus culminicola ,n,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus elliffii ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus eumundi ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus ferruginiflorus ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus foveolatus ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus grahamii ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus johnsonii ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus largiflorens ssp. largiflorens ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus largiflorens ssp. retinervis ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus linsmithii ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus ruminatus ,e,drupe,bi,1,Morley and Toelken (1983) for the family -Elaeocarpaceae,Elaeocarpus sericopetalus ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus angustifolius ,n,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus arnhemicus ,n,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus bancroftii ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus carolinae ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus coorangooloo ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus culminicola ,n,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus elliffii ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus eumundi ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus ferruginiflorus ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus foveolatus ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus grahamii ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus johnsonii ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus largiflorens ssp. largiflorens ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus largiflorens ssp. retinervis ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus linsmithii ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus ruminatus ,e,drupe,bi,1,Morley and Toelken (1983) for the family +Elaeocarpaceae,Elaeocarpus sericopetalus ,e,drupe,bi,1,Morley and Toelken (1983) for the family Elaeocarpaceae,Elaeocarpus ssp. (Mossman Bluff DF 1666) ,e,drupe,bi,1,"flowers not seen, estimated as bi" Elaeocarpaceae,Elaeocarpus ssp. (Mt Bellenden Ker LJB 18336) ,e,drupe,bi,1,Hyland et al. (2003) Elaeocarpaceae,Elaeocarpus ssp. (Mt Spurgeon BH 2907RFK) ,e,drupe,bi,1,Hyland et al. (2003) @@ -220,7 +220,7 @@ Euphorbiaceae,Bischofia javanica ,n,drupe,mono?,4,unresolved Euphorbiaceae,Breynia ssp. (Black Mountain BH 25658RFK) ,e,berry,mono,4,"Unresolved, probably monoecious" Euphorbiaceae,Breynia stipitata ,e,berry,mono,3,Hyland et al. (2003) Euphorbiaceae,Briedelia insulana var. insulana ,n,drupe,mono,3,"Gray 1863, QRS" -Euphorbiaceae,Briedelia leichhardtii ,e,drupe,mono,3,Forster (1999) +Euphorbiaceae,Briedelia leichhardtii ,e,drupe,mono,3,Forster (1999) Euphorbiaceae,Choriceras majus ,e,capsule,mono,3,"Hyland 10633, QRS" Euphorbiaceae,Choriceras tricorne ,n,capsule,mono,3,"Brooker 3240, NSW" Euphorbiaceae,Claoxylon tenerifolium ,n,capsule,dio,2,Airy-Shaw (1974) @@ -316,7 +316,7 @@ Fabaceae (Mimosaceae),Albizia procera ,n,legume,bi,1,Hyland et al. (2003) Fabaceae (Mimosaceae),Albizia retusa ,n,legume,bi,1,Hyland et al. (2003) Fabaceae (Mimosaceae),Albizia ssp. (Sir Charles Hardy Is BH 25849RFK) ,e,legume,bi,1,Hyland et al. (2003) Fabaceae (Mimosaceae),Albizia ssp. (Windsor Tableland BG 2181) ,e,legume,bi,1,Hyland et al. (2003) -Fabaceae (Mimosaceae),Archidendron grandiflorum ,n,legume,bi,1,Nielsen (1982) +Fabaceae (Mimosaceae),Archidendron grandiflorum ,n,legume,bi,1,Nielsen (1982) Fabaceae (Mimosaceae),Archidendron hendersonii ,e,legume,bi,1,Nielsen (1982) Fabaceae (Mimosaceae),Archidendron hirsutum ,e,legume,bi,1,Nielsen (1982) Fabaceae (Mimosaceae),Archidendron kanisii ,e,legume,bi,1,Nielsen (1982) @@ -466,16 +466,16 @@ Malvaceae (Sterculiaceae),Argyrodendron ssp. (Mt Haig LSS 14307) ,e,samara,mono, Malvaceae (Sterculiaceae),Argyrodendron ssp. (Penta Tulip Oak BH 2565RFK) ,e,samara,mono,3, Hyland et al. (2003) Malvaceae (Sterculiaceae),Argyrodendron ssp. (Whyanbeel BH 1106RFK) ,e,samara,mono,3, Hyland et al. (2003) Malvaceae (Sterculiaceae),Argyrodendron trifoliolatum ,e,samara,mono,3,"Gray 806, QRS" -Malvaceae (Sterculiaceae),Brachychiton acerifolius ,e,follicles,mono,3, Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton albidus ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton australis ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton chillagoensis ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton diversifolius ssp. diversifolius ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton garrawayae ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton grandiflorus ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton velutinosus ,n,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton viridiflorus ,e,follicles,mono,3,Guymer (1988). -Malvaceae (Sterculiaceae),Brachychiton xanthophyllus ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton acerifolius ,e,follicles,mono,3, Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton albidus ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton australis ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton chillagoensis ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton diversifolius ssp. diversifolius ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton garrawayae ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton grandiflorus ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton velutinosus ,n,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton viridiflorus ,e,follicles,mono,3,Guymer (1988). +Malvaceae (Sterculiaceae),Brachychiton xanthophyllus ,e,follicles,mono,3,Guymer (1988). Malvaceae (Sterculiaceae),Commersonia bartramia ,n,capsule,bi,1,Hyland et al. (2003) Malvaceae (Sterculiaceae),Commersonia ssp. (Klondike BH 25863RFK) ,e,capsule,bi,1,Hyland et al. (2003) Malvaceae (Sterculiaceae),Firmiana papuana ,n,follicles,mono,3,"Hyland 4925, QRS" @@ -504,20 +504,20 @@ Meliaceae,Aglaia meridionalis ,e,berry,dio,2,Pennington (1975) Meliaceae,Aglaia sapindina ,n,berry,dio,2,Pennington (1975) Meliaceae,Aglaia spectabilis ,n,berry,dio,2,Pennington (1975) Meliaceae,Aglaia tomentosa ,n,berry,dio,2,Pennington (1975) -Meliaceae,Anthocarapa nitidula ,n,capsule,mono,3, +Meliaceae,Anthocarapa nitidula ,n,capsule,mono,3, Meliaceae,Chisocheton longistipitatus ,n,capsule,bi,1,"Gray 3849, QRS" -Meliaceae,Dysoxylum alliaceum ,n,capsule,bi,1,Hyland et al. (2003) +Meliaceae,Dysoxylum alliaceum ,n,capsule,bi,1,Hyland et al. (2003) Meliaceae,Dysoxylum arborescens ,n,capsule,bi,1,"Hyland 12892, QRS" -Meliaceae,Dysoxylum gaudichaudianum ,n,capsule,dio,2,Hyland et al.2003 -Meliaceae,Dysoxylum klanderi ,e,capsule,dio,2,Hyland et al.2003 +Meliaceae,Dysoxylum gaudichaudianum ,n,capsule,dio,2,Hyland et al.2003 +Meliaceae,Dysoxylum klanderi ,e,capsule,dio,2,Hyland et al.2003 Meliaceae,Dysoxylum latifolium ,n,capsule,bi,1,Hyland et al. (2003) Meliaceae,Dysoxylum mollissimum ssp. molle ,n,capsule,bi,1,Hyland et al. (2003) -Meliaceae,Dysoxylum oppositifolium ,n,capsule,dio,2,Hyland et al.2003 +Meliaceae,Dysoxylum oppositifolium ,n,capsule,dio,2,Hyland et al.2003 Meliaceae,Dysoxylum papuanum ,n,capsule,bi,1,Hyland et al. (2003) Meliaceae,Dysoxylum parasiticum ,n,capsule,bi,1,Hyland et al. (2003) -Meliaceae,Dysoxylum pettigrewianum ,n,capsule,dio,2,Hyland et al.2003 -Meliaceae,Dysoxylum rufum ,e,capsule,dio,2,Hyland et al.2003 -Meliaceae,Dysoxylum setosum ,n,capsule,dio,2,Hyland et al.2003 +Meliaceae,Dysoxylum pettigrewianum ,n,capsule,dio,2,Hyland et al.2003 +Meliaceae,Dysoxylum rufum ,e,capsule,dio,2,Hyland et al.2003 +Meliaceae,Dysoxylum setosum ,n,capsule,dio,2,Hyland et al.2003 Meliaceae,Dysoxylum ssp. (Gosschalk LA BG 786) ,e,capsule,dio,2,Hyland et al. (2003) Meliaceae,Melia azedarach ,n,drupe,mono,3,Pennington (1975) Meliaceae,Synoum glandulosum ssp. paniculosum ,e,capsule,bi,1,Hyland et al. (2003) @@ -542,8 +542,8 @@ Monimiaceae,Wilkiea angustifolia ,e,drupe,dio?,2,"Hyland 14468 & Hyland 11695, Q Monimiaceae,Wilkiea ssp. (Mt Molloy LSS 3955) ,e,drupe,dio,2,Hyland et al. (2003). Monimiaceae,Wilkiea ssp. (palmerston BH 80RFK) ,e,drupe,dio,2,"Female flowers not seen, probably dioecious, see also Hyland et al. (2003)" Monimiaceae,Wilkiea wardellii ,e,drupe,mono/dio,4,unresolved -Moraceae,Antiaris toxicaria var. macrophylla ,n,drupe,mono,3,Chew (1989) -Moraceae,Artocarpus glaucus ,n,syncarp,mono,3,Chew (1989) +Moraceae,Antiaris toxicaria var. macrophylla ,n,drupe,mono,3,Chew (1989) +Moraceae,Artocarpus glaucus ,n,syncarp,mono,3,Chew (1989) Moraceae,Ficus adenosperma ,n,synconium,dio,2,"D. D. Dixon, pers. comm" Moraceae,Ficus albipila ,n,synconium,mono,3,"D. Dixon, pers. comm" Moraceae,Ficus atricha ,n,synconium,mono,3,"D. Dixon, pers. comm" @@ -584,8 +584,8 @@ Moraceae,Ficus virens var. sublanceolata ,n,synconium,mono,3,"D. Dixon, pers. co Moraceae,Ficus virens var. virens ,n,synconium,mono,3,"D. Dixon, pers. comm" Moraceae,Ficus virgata ,n,synconium,dio,2,"D. Dixon, pers. comm" Moraceae,Ficus watkinsiana ,e,synconium,mono,3,Hyland et al. (2003) -Moraceae,Streblus brunonianus ,e,achene,mono,3,Chew (1989) -Moraceae,Streblus glaber var. australianus ,e,achene,mono,3,Chew (1989) +Moraceae,Streblus brunonianus ,e,achene,mono,3,Chew (1989) +Moraceae,Streblus glaber var. australianus ,e,achene,mono,3,Chew (1989) Myristicaceae,Horsfieldia australiana ,e,capsule,dio,2,Hyland et al. (2003) Myristicaceae,Myristica insipida ,e,capsule,dio,2,Hyland et al. (2003) Myrsinaceae,Ardisia pachyrrhachis ,e,drupe,bi,1,Hyland et al. (2003) @@ -887,7 +887,7 @@ Rubiaceae,Ixora ssp. (North Mary LA BH 8618) ,e,drupe,bi,1,Hyland et al. (2003) Rubiaceae,Ixora timorensis ,n,drupe,bi,1,Hyland et al. (2003) Rubiaceae,Kailarsenia ochreata ,e,drupe,dio,2,Puttock (1989) Rubiaceae,Morinda citrifolia var. citrifolia ,n,drupe,bi,1,Hyland et al. (2003) -Rubiaceae,Nauclea orientalis ,n,syncarp,bi,1,Hyland et al. (2003) +Rubiaceae,Nauclea orientalis ,n,syncarp,bi,1,Hyland et al. (2003) Rubiaceae,Neonauclea glabra ,n,capsule,bi,1,Risdale (1989) Rubiaceae,Pavetta kimberleyana ,e,drupe,bi,1,Reynolds (1993) Rubiaceae,Psychotria fitzalanii ,e,drupe,bi,1,Hyland et al. (2003) @@ -913,11 +913,11 @@ Rutaceae,Bosistoa medicinalis ,e,follicles,bi,1,Hartley 1977 Rutaceae,Brombya platynema ,e,capsule,bi,1,Hyland et al. (2003) Rutaceae,Citrus garrawayae ,n,berry,bi,1,Hyland et al. (2003) Rutaceae,Clausena brevistyla ,n,drupe,bi,1,Hyland et al. (2003) -Rutaceae,Dinosperma erythrococca ,e,follicles,bi,1,Hartley (1997) -Rutaceae,Dinosperma melanophloia ,e,follicles,bi,1,Hartley (1997) -Rutaceae,Dinosperma stipitata ,e,follicles,bi,1,Hartley (1997) +Rutaceae,Dinosperma erythrococca ,e,follicles,bi,1,Hartley (1997) +Rutaceae,Dinosperma melanophloia ,e,follicles,bi,1,Hartley (1997) +Rutaceae,Dinosperma stipitata ,e,follicles,bi,1,Hartley (1997) Rutaceae,Eriostemon banksii ,e,follicles,bi,1,Hyland et al. (2003) -Rutaceae,Euodia hylandii ,e,follicles,bi,1,Hartley (2001) +Rutaceae,Euodia hylandii ,e,follicles,bi,1,Hartley (2001) Rutaceae,Flindersia acuminata ,e,capsule,mono,3,"Gray 3939, QRS" Rutaceae,Flindersia bourjotiana ,e,capsule,bi,1,"Irvine 523, QRS" Rutaceae,Flindersia brassii ,e,capsule,bi,1,"Gray 4407, QRS" @@ -936,14 +936,14 @@ Rutaceae,Medicosma glandulosa ,e,follicles,bi,1,Hartley (1985) Rutaceae,Medicosma riparia,n,follicles,bi,1,Hartley (1985) Rutaceae,Medicosma sessiliflora ,e,follicles,bi,1,Hartley (1985) Rutaceae,Medicosma ssp. (Pieter Botte BH 3503RFK) ,e,follicles,bi,1,Hyland et al. (2003) -Rutaceae,Melicope bonwickii ,n,follicles,bi,1,Hartley (2001) -Rutaceae,Melicope broadbentiana ,e,follicles,dio,2,Hartley (2001) -Rutaceae,Melicope elleryana ,n,follicles,bi,1,Hartley (2001) -Rutaceae,Melicope jonesii ,e,follicles,bi,1,Hartley (2001) -Rutaceae,Melicope peninsularis ,n,"deh, capsule",bi,1,Hartley (2001) +Rutaceae,Melicope bonwickii ,n,follicles,bi,1,Hartley (2001) +Rutaceae,Melicope broadbentiana ,e,follicles,dio,2,Hartley (2001) +Rutaceae,Melicope elleryana ,n,follicles,bi,1,Hartley (2001) +Rutaceae,Melicope jonesii ,e,follicles,bi,1,Hartley (2001) +Rutaceae,Melicope peninsularis ,n,"deh, capsule",bi,1,Hartley (2001) Rutaceae,Melicope rubra,n,follicles,bi,1,Hartley (2001) -Rutaceae,Melicope vitiflora ,e,follicles,dio,2,Hartley (2001) -Rutaceae,Melicope xanthoxyloides ,e,follicles,mix,4,Hartley (2001) +Rutaceae,Melicope vitiflora ,e,follicles,dio,2,Hartley (2001) +Rutaceae,Melicope xanthoxyloides ,e,follicles,mix,4,Hartley (2001) Rutaceae,Micromelum minutum ,n,berry,bi,1,Hyland et al. (2003) Rutaceae,Murraya paniculata ,n,berry,bi,1,Hyland et al. (2003) Rutaceae,Pitaviaster haplophyllus ,e,"fleshy, indeh",bi,1,Hyland et al. (2003) @@ -1016,12 +1016,12 @@ Sapindaceae,Jagera pseudorhus var. pseudorhus forma pilosiuscula ,n,capsule,mono Sapindaceae,Lepiderema hirsuta ,e,capsule,mono,3,Check AustB 1(4): 488 1981 Sapindaceae,Lepiderema largiflorens ,e,capsule,mono,3,"Hyland 8798, QRS" Sapindaceae,Lepiderema sericolignis ,e,capsule,mono,3,Estimated from Reynolds (1981) -Sapindaceae,Lepidopetalum fructoglabrum ,n,capsule,mono,3,Estimated from Reynolds (1985) +Sapindaceae,Lepidopetalum fructoglabrum ,n,capsule,mono,3,Estimated from Reynolds (1985) Sapindaceae,Lepisanthes rubiginosa ,n,drupe,mono,3,"Malaya, Saw FRI 36468, QRS" Sapindaceae,Mischarytera lautereriana ,e,capsule,mono,3,"Gray 4850, QRS" Sapindaceae,Mischarytera macrobotrys ,n,capsule,mono,3,"Connors 195, QRS" Sapindaceae,Mischocarpus exangulatus ,e,capsule,mono,3,"Gray 1333, NSW; Gray 7145, QRS" -Sapindaceae,Mischocarpus grandissimus ,e,capsule,mono,3,Reynolds (1985) +Sapindaceae,Mischocarpus grandissimus ,e,capsule,mono,3,Reynolds (1985) Sapindaceae,Mischocarpus lachnocarpus ,n,capsule,mono,3,"Fell 2581 and J. Pritchard, QRS" Sapindaceae,Mischocarpus macrocarpus ,e,capsule,mono,3,"Gray 4420, QRS" Sapindaceae,Mischocarpus pyriformis ssp. pyriformis ,e,capsule,mono,3,"Gray 1708, QRS" @@ -1038,7 +1038,7 @@ Sapindaceae,Sarcopteryx reticulata ,e,capsule,mono,3,"Gray 1022, NSW" Sapindaceae,Sarcopteryx ssp. (McIlwraith Range BH 3261RFK) ,e,capsule,mono,3,"Hyland 16268, QRS" Sapindaceae,Sarcotoechia cuneata ,e,capsule,mono,3,"McDonald 24, QRS" Sapindaceae,Sarcotoechia lanceolata ,e,capsule,mono,3,Reynolds (1985) -Sapindaceae,Sarcotoechia protracta ,e,capsule,mono,3,Reynolds (1985) +Sapindaceae,Sarcotoechia protracta ,e,capsule,mono,3,Reynolds (1985) Sapindaceae,Sarcotoechia serrata ,e,capsule,mono,3,Reynolds (1985) Sapindaceae,Sarcotoechia ssp. (Mountain Sarcotoechia WWC 100) ,e,capsule,mono,3,estimated Sapindaceae,Sarcotoechia villosa ,e,capsule,mono,3,Reynolds (1985) @@ -1078,7 +1078,7 @@ Sapotaceae,Pouteria xerocarpa ,e,berry,bi,1,"L. Jessup, pers. comm." Sapotaceae,Pouteria xylocarpa ,n,berry,bi,1,"L. Jessup, pers. comm." Simaroubaceae,Ailanthus integrifolia ssp. integrifolia ,n,samara,dio,2,Hewson (1985) Simaroubaceae,Ailanthus triphysa ,n,samara,dio,2,Hewson (1985) -Simaroubaceae,Brucea javanica ,n,drupe,dio or bi,2,Hewson (1985) +Simaroubaceae,Brucea javanica ,n,drupe,dio or bi,2,Hewson (1985) Simaroubaceae,Quassia baileyana ,e,drupe,bi,1,Jessup (1985) Simaroubaceae,Quassia ssp. (Barong BG 742) ,e,drupe,bi,1,Hyland et al. (2003) Solanaceae,Duboisia myoporoides ,n,berry,bi,1,"Purdie, Symon & Haegi (1982)" @@ -1089,12 +1089,12 @@ Symplocaceae,Symplocos ampulliformis ,e,fleshy-indeh,bi,1,Hyland et al. (2003) Symplocaceae,Symplocos cochinchinensis ssp. thwaitesii var. gittonsii ,e,fleshy-indeh,bi,1,Hyland et al. (2003) Symplocaceae,Symplocos cochinchinensis ssp. thwaitesii var. glaberrim ,e,fleshy-indeh,bi,1,Hyland et al. (2003) Symplocaceae,Symplocos cochinchinensis ssp. thwaitesii var. pilosiusc ,e,fleshy-indeh,bi,1,"Gross 2002-3, NE" -Symplocaceae,Symplocos hylandii ,e,"dry, deh, follicle",mono,3,Hyland et al. (2003) -Symplocaceae,Symplocos paucistaminea ,n,fleshy-indeh,bi,1,Hyland et al. (2003) +Symplocaceae,Symplocos hylandii ,e,"dry, deh, follicle",mono,3,Hyland et al. (2003) +Symplocaceae,Symplocos paucistaminea ,n,fleshy-indeh,bi,1,Hyland et al. (2003) Symplocaceae,Symplocos ssp. (Mt Finnigan LJB 21029) ,e,fleshy-indeh,bi,1,Hyland et al. (2003) Symplocaceae,Symplocos ssp. (North Mary BG 2543) ,e,fleshy-indeh,bi,1,Hyland et al. (2003) Symplocaceae,Symplocos stawellii var. montana ,e,fleshy-indeh,bi,1,Hyland et al. (2003) -Symplocaceae,Symplocos stawellii var. stawellii ,n,fleshy-indeh,bi,1,Hyland et al. (2003) +Symplocaceae,Symplocos stawellii var. stawellii ,n,fleshy-indeh,bi,1,Hyland et al. (2003) Theaceae,Ternstroemia cherryi ,n,"deh, capsule",mono,3,Mabberley (1985); Hyland et al. (2003) Thymelaceae,Lethedon setosa ,e,capsule,mono,3,"Hyland 13368, QRS" Thymelaceae,Oreodendron biflorum ,e,drupe,bi,1,Rye (1990) @@ -1109,9 +1109,9 @@ Ulmaceae,Trema aspera ,n,drupe,mono,3,"Gray 309, QRS" Ulmaceae,Trema cannabina ,n,drupe,mono,3,"Stocker 1703, QRS" Ulmaceae,Trema orientalis ,n,drupe,mono,3,"Whiffen 596 & Risley 596, QRS" Ulmaceae,Trema tomentosa ,n,drupe,mono,3,"Gray 4570, QRS" -Urticaceae,Dendrocnide corallodesme ,n,achene,dio,2,Chew (1989) -Urticaceae,Dendrocnide photinophylla ,e,achene,dio,2,Chew (1989) -Urticaceae,Pipturus argenteus ,n,"ind, nut",dio,2,Chew (1989) +Urticaceae,Dendrocnide corallodesme ,n,achene,dio,2,Chew (1989) +Urticaceae,Dendrocnide photinophylla ,e,achene,dio,2,Chew (1989) +Urticaceae,Pipturus argenteus ,n,"ind, nut",dio,2,Chew (1989) Verbenaceae,Callicarpa candicans ,n,drupe,bi,1,Munir (1982) Verbenaceae,Clerodendrum costatum ,n,drupe,bi,1,Munir (1989) Verbenaceae,Clerodendrum floribundum var. floribundum ,n,drupe,bi,1,Munir (1989) diff --git a/data/Gross_2005/metadata.yml b/data/Gross_2005/metadata.yml index fcd9363bd..cc385d89f 100644 --- a/data/Gross_2005/metadata.yml +++ b/data/Gross_2005/metadata.yml @@ -406,14 +406,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Argyrodendron sp. Mt Haig ( L.S.Smith+ 14307) - replace: Argyrodendron sp. Mt Haig (L.S.Smith+ 14307) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK 1106) - replace: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK1106) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Argyrodendron ssp. (Boonjee BH 2139RFK) replace: Argyrodendron sp. (Boonjee BH 2139RFK) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -517,7 +509,7 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Chionanthus sp. [Linociera sp. (Little Pine LA BH 2520RFK)] +- find: Linociera sp. (Little Pine LA BH 2520RFK) replace: Linociera sp. (Little Pine LA BH 2520RFK) reason: Manual alignment to canonical name in APNI (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species @@ -647,11 +639,6 @@ taxonomic_updates: replace: Hollandaea sp. (Pinnacle Rock Track PIF 10714) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Ilex sp. Gadgarra (B.P.Hyland RFK 2011) Qld Herbarium - replace: Ilex sp. 'Gadgarra' (B.P.Hyland RFK 2011) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Ilex ssp. (Gadgarra BH 2011RFK) replace: Ilex sp. (Gadgarra BH 2011RFK) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -673,18 +660,10 @@ taxonomic_updates: replace: Mesua larnachiana reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Mesua sp. Boonjee (A.K. Irvine 1218) - replace: Mesua sp. Boonjie (A.K.Irvine 1218) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Mesua ssp. (Boonjee AKI 1218) replace: Mesua sp. (Boonjee AKI 1218) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Millettia sp. [Pongamia glabra var. minor] - replace: Millettia pinnata - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Mitrephora zippelliana replace: Mitrephora zippeliana reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -714,19 +693,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Polyosma sp. (Mt Bellenden Ker BH 2524RFK) - replace: Polyosma sp. (Mt Bellenden Ker BH 2524RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Polyosma sp. (Mt Lewis BH 25241RFK) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Polyosma sp. Mt Lewis (B.Hyland RFK25241) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Polyosma ssp. (Mt Bellenden Ker BH 2524RFK) replace: Polyosma sp. (Mt Bellenden Ker BH 2524RFK) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -778,10 +744,6 @@ taxonomic_updates: replace: Sarcotoechia sp. (Mountain Sarcotoechia WWC100) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Stenocarpus sp. Hinchinbrook Is. (F.D.Hocking AQ229860) - replace: Stenocarpus sp. Hinchinbrook Is. (F.D.Hockings AQ229860) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Stenocarpus ssp. (Hinchinbrook Is. FDH AQ229860) replace: Stenocarpus sp. Hinchinbrook Is. (F.D.Hockings AQ229860) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -833,10 +795,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Uromyrtus sp. Tinaroo Range (G.P.Guymer 2034) - replace: Uromyrtus sp. (Tinaroo Range G.P.Guymer 2034) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Uromyrtus ssp. (Tinaroo Range GPG 2034) replace: Uromyrtus sp. (Tinaroo Range G.P.Guymer 2034) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -858,10 +816,6 @@ taxonomic_updates: replace: Xylopia sp. (Bertiehaugh Homestead C.Dalliston CC173) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species -- find: Xylosma sp. Mt Lewis (G.Sankowsky 1108) - replace: Xylosma sp. Mt Lewis (G.Sankowsky+ 1108) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Xylosma ssp. (Mt Lewis GS 1108) replace: Xylosma sp. (Mt Lewis GS 1108) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) diff --git a/data/Ilic_2000/metadata.yml b/data/Ilic_2000/metadata.yml index a3877f8f3..be9425a01 100644 --- a/data/Ilic_2000/metadata.yml +++ b/data/Ilic_2000/metadata.yml @@ -54,11 +54,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Croften sp. - replace: Ageratina sp. [Crofton sp.; Ilic_2000] - reason: Manual match to genus for taxon that can't be match to species (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: genus - find: Croton indet replace: Croton sp. [Croton indet; Ilic_2000] reason: match_20. Rewording name to be recognised as genus rank, with genus accepted @@ -116,11 +111,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Jagera sp - replace: Jagera sp. [Ilic_2000] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Lepiderema indet replace: Lepiderema sp. [Lepiderema indet; Ilic_2000] reason: match_20. Rewording name to be recognised as genus rank, with genus accepted @@ -165,7 +155,4 @@ exclude_observations: - variable: taxon_name find: Aglaia nitidula reason: PNG tree - in Zanne_2009 under PNG trees reference; Bolza (E Wenk, 2020.06.18) -- variable: taxon_name - find: Croften sp. - reason: not a known genus (E Wenk, 2020.06.29) questions: .na diff --git a/data/Jurado_1991/metadata.yml b/data/Jurado_1991/metadata.yml index 6c2f82b6a..74d98344d 100644 --- a/data/Jurado_1991/metadata.yml +++ b/data/Jurado_1991/metadata.yml @@ -285,9 +285,6 @@ substitutions: - trait_name: lifespan find: <50 replace: 20--50 -- trait_name: lifespan - find: <100 - replace: 100--1000 taxonomic_updates: - find: Amphipogon carcinus replace: Amphipogon caricinus diff --git a/data/Kanowski_2000/metadata.yml b/data/Kanowski_2000/metadata.yml index 1566723b7..7f8a19af8 100644 --- a/data/Kanowski_2000/metadata.yml +++ b/data/Kanowski_2000/metadata.yml @@ -773,11 +773,6 @@ taxonomic_updates: reason: Exact match of the first word of the taxon name to an APC-accepted genus (2023-11-02) taxonomic_resolution: genus -- find: Austromyrtus sp. (#939) - replace: Austromyrtus sp. [Austromyrtus sp. (#939); Kanowski_2000] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-22) - taxonomic_resolution: genus - find: Bielschmiedia bancroftii replace: Beilschmiedia bancroftii reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/Kooyman_2011/metadata.yml b/data/Kooyman_2011/metadata.yml index 6e4e986a0..651751f9d 100644 --- a/data/Kooyman_2011/metadata.yml +++ b/data/Kooyman_2011/metadata.yml @@ -22,27 +22,27 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% group_by(`Species_reconciled with updates and additions`) %>% mutate(across(c(`seed length maximum (mm)`,`seed length minimum (mm)`, - `seed width maximum (mm)`,`seed width minimum (mm)`,`leaves lobed`), + `seed width maximum (mm)`,`seed width minimum (mm)`,`leaves lobed`), list(~ replace(.,duplicated(.),NA)))) %>% ungroup() %>% mutate( - `Height (m)` = ifelse(is.na(plant_height_duplicate),`Height (m)`,NA), - `wood density species` = ifelse(is.na(wood_density_duplicate),`wood density species`,NA), - `seed width minimum (mm)` = ifelse(is.na(seed_width_min_duplicate),`seed width minimum (mm)`,NA), - `seed width maximum (mm)` = ifelse(is.na(seed_width_max_duplicate),`seed width maximum (mm)`,NA), - `seed length minimum (mm)` = ifelse(is.na(seed_length_min_duplicate),`seed length minimum (mm)`,NA), - `seed length maximum (mm)` = ifelse(is.na(seed_length_max_duplicate),`seed length maximum (mm)`,NA), - `leaf width minimum (mm)` = ifelse(is.na(leaf_width_min_duplicate),`leaf width minimum (mm)`,NA), - `leaf width maximum (mm)` = ifelse(is.na(leaf_width_max_duplicate),`leaf width maximum (mm)`,NA), - `leaf length minimum (mm)` = ifelse(is.na(leaf_length_min_duplicate),`leaf length minimum (mm)`,NA), + `Height (m)` = ifelse(is.na(plant_height_duplicate),`Height (m)`,NA), + `wood density species` = ifelse(is.na(wood_density_duplicate),`wood density species`,NA), + `seed width minimum (mm)` = ifelse(is.na(seed_width_min_duplicate),`seed width minimum (mm)`,NA), + `seed width maximum (mm)` = ifelse(is.na(seed_width_max_duplicate),`seed width maximum (mm)`,NA), + `seed length minimum (mm)` = ifelse(is.na(seed_length_min_duplicate),`seed length minimum (mm)`,NA), + `seed length maximum (mm)` = ifelse(is.na(seed_length_max_duplicate),`seed length maximum (mm)`,NA), + `leaf width minimum (mm)` = ifelse(is.na(leaf_width_min_duplicate),`leaf width minimum (mm)`,NA), + `leaf width maximum (mm)` = ifelse(is.na(leaf_width_max_duplicate),`leaf width maximum (mm)`,NA), + `leaf length minimum (mm)` = ifelse(is.na(leaf_length_min_duplicate),`leaf length minimum (mm)`,NA), `leaf length maximum (mm)` = ifelse(is.na(leaf_length_max_duplicate),`leaf length maximum (mm)`,NA) ) %>% - select(-`seed size categorical: <10mm`,-`seed size categorical: >10mm`, + select(-`seed size categorical: <10mm`,-`seed size categorical: >10mm`, `wood density genus`, `wood density family`, -seed_width_min_duplicate, - seed_width_max_duplicate, - -seed_length_min_duplicate, -seed_length_max_duplicate, -leaf_width_min_duplicate, + -seed_length_min_duplicate, -seed_length_max_duplicate, -leaf_width_min_duplicate, -leaf_width_max_duplicate, -leaf_length_min_duplicate, -leaf_length_max_duplicate, -plant_height_duplicate, -wood_density_duplicate) %>% group_by(`Species_reconciled with updates and additions`) %>% @@ -69,12 +69,12 @@ dataset: mutate( `leaves lobed` = ifelse(`leaves lobed` %in% c("no NA", "no NA NA", "no NA NA NA"), "unlobed", `leaves lobed`), `growth form` = str_replace_all(`growth form`," NA",""), - `growth form` = na_if(`growth form`,"NA"), - `leaf type` = str_replace_all(`leaf type`," NA",""), + `growth form` = na_if(`growth form`,"NA"), + `leaf type` = str_replace_all(`leaf type`," NA",""), `leaf longevity` = str_replace_all(`leaf longevity`," NA",""), `leaf longevity` = na_if(`leaf longevity`,"NA"), ) - ' + ' collection_date: 2010/2010 taxon_name: Species_reconciled with updates and additions description: Rainforest species traits @@ -342,9 +342,6 @@ substitutions: - trait_name: plant_growth_form find: shrub shrub vine vine replace: shrub climber_herbaceous -- trait_name: plant_growth_form - find: shrub shrub vine vine - replace: shrub climber_herbaceous - trait_name: plant_growth_form find: NA replace: .na @@ -539,18 +536,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Argyrodendron sp. Kin Kin (W.D.Francis AQ 81198) - replace: Argyrodendron sp. Kin Kin (W.D.Francis AQ81198) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Argyrodendron sp. Mt Haig ( L.S.Smith+ 14307) - replace: Argyrodendron sp. Mt Haig (L.S.Smith+ 14307) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK 1106) - replace: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK1106) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Aristolochia pubera_aromatica replace: Aristolochia pubera var. aromatica reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -1025,11 +1010,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus known by APC (2022-11-10) taxonomic_resolution: genus -- find: Fitzalania sp. [Fitzalania Gregory_River] - replace: Meiogyne sp. [Fitzalania sp. [Fitzalania Gregory_River]; Kooyman_2011] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-10) - taxonomic_resolution: genus - find: Flacourtia Shiptons-Flat replace: Flacourtia sp. Shiptons Flat (L.W.Jessup+ GJD3200) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -1064,10 +1044,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Garcinia sp. Davies Creek (JGT 14745) - replace: Garcinia sp. (Davies Creek JGT 14745) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Geijera salicifolia-latifolia replace: Geijera salicifolia var. latifolia reason: match_06. Automatic alignment with synonymous term among known canonical @@ -1258,10 +1234,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Leucopogon sp. Lamington (G.Leiper AQ 633386) - replace: Leucopogon sp. Lamington (G.Leiper AQ633386) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Macaranga involucrata_mallotoides replace: Macaranga involucrata var. mallotoides reason: match_06. Automatic alignment with synonymous term among known canonical @@ -1321,11 +1293,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: subspecies -- find: Meiogyne sp. [Fitzalania Gregory_River] - replace: Meiogyne sp. [Meiogyne sp. [Fitzalania Gregory_River]; Kooyman_2011] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Melaleuca recurvus replace: Melaleuca recurva reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -1352,10 +1319,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Mesua sp. Boonjee (A.K. Irvine 1218) - replace: Mesua sp. Boonjie (A.K.Irvine 1218) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Millettia McIlwraith replace: Millettia sp. (McIlwraith) reason: match_19. Automatic alignment with species-level canonical name in APNI @@ -1427,10 +1390,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Notelaea sp. Elcho Island (C. R. Dunlop 7597) - replace: Notelaea sp. Elcho Island (C.R.Dunlop 7597) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Notelaea venosava replace: Notelaea venosa reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1499,10 +1458,6 @@ taxonomic_updates: replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species -- find: Polyosma sp. Mt Lewis (B.Hyland RFK25241) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Pseuduvaria mulgraveana-glabrescens replace: Pseuduvaria mulgraveana var. glabrescens reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -1542,11 +1497,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Psychotria sp. (Daintree N.P.) - replace: Psychotria sp. Daintree NP (P.I.Forster+ PIF21974) - reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name - in APC accepted when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Psydrax Berrigurra-Station replace: Canthium sp. (Berrigurra Station E.R.Anderson 2829) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) @@ -1640,10 +1590,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Rubiaceae Gen. Nov. sp. (Shute Harbour DAH Q811) - replace: Gen. (AQ520454) sp. Shute Harbour (D.A.Halford Q811) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Rubiaceae Shute-Harbour replace: Gen. (AQ520454) sp. Shute Harbour (D.A.Halford Q811) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) @@ -1658,10 +1604,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: variety -- find: Samadera sp. Mt Goonanaman (J.Randall 738) - replace: Samadera sp. Mt Goonaneman (J.Randall 738) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Sarcopteryx McIlwraith-Range replace: Sarcopteryx sp. (McIlwraith Range BH 3261RFK) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -1715,10 +1657,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Stenocarpus sp. Hinchinbrook Is. (F.D.Hocking AQ229860) - replace: Stenocarpus sp. Hinchinbrook Is. (F.D.Hockings AQ229860) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Stephania japonica-discolor replace: Stephania japonica var. discolor reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -1773,21 +1711,6 @@ taxonomic_updates: reason: Manual match to genus for taxon that can't be match to species (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: genus -- find: Symplocos gittinsii / Symplocos thwaitesii - replace: Symplocos sp. [Symplocos gittinsii / Symplocos thwaitesii; Kooyman_2011] - reason: match_04. Rewording taxon where `/` indicates uncertain species identification - to align with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus -- find: Symplocos glabra / Symplocos thwaitesii - replace: Symplocos sp. [Symplocos glabra / Symplocos thwaitesii; Kooyman_2011] - reason: match_04. Rewording taxon where `/` indicates uncertain species identification - to align with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus -- find: Symplocos puberula / Symplocos thwaitesii - replace: Symplocos sp. [Symplocos puberula / Symplocos thwaitesii; Kooyman_2011] - reason: match_04. Rewording taxon where `/` indicates uncertain species identification - to align with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Symplocos stawellii-montana replace: Symplocos stawellii var. montana reason: match_06. Automatic alignment with synonymous term among known canonical @@ -1984,10 +1907,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Xylosma sp. Mt Lewis (G.Sankowsky 1108) - replace: Xylosma sp. Mt Lewis (G.Sankowsky+ 1108) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Zieria Binjour replace: Zieria sp. (Binjour P.I.Forster PIF14134) reason: match_14. Automatic alignment with species-level name known by APC when diff --git a/data/Kubiak_2009/metadata.yml b/data/Kubiak_2009/metadata.yml index dfb4af6cb..3cb2f9f55 100644 --- a/data/Kubiak_2009/metadata.yml +++ b/data/Kubiak_2009/metadata.yml @@ -2297,6 +2297,10 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2023-06-22) taxonomic_resolution: species +- find: Liquidambar styraciflua + replace: Liquidambar styraciflua + reason: Maintaining commonly measured non-native taxon (E. Wenk, 2023-11-19) + taxonomic_resolution: species - find: Lissanthe strigosa subsp. ?subulata replace: Lissanthe strigosa subsp. subulata reason: match_06. Automatic alignment with synonymous term among accepted canonical diff --git a/data/Lamont_2002/metadata.yml b/data/Lamont_2002/metadata.yml index 7ea3695e2..312a24a32 100644 --- a/data/Lamont_2002/metadata.yml +++ b/data/Lamont_2002/metadata.yml @@ -288,10 +288,6 @@ taxonomic_updates: replace: Hakea cygnus subsp. needlei reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: subspecies -- find: Hakea cygna subsp. needlei - replace: Hakea cygnus subsp. needlei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: subspecies - find: Hakea francisiana coriacea replace: Hakea francisiana reason: match_14. Automatic alignment with species-level canonical name in APC accepted diff --git a/data/Lunt_2012/metadata.yml b/data/Lunt_2012/metadata.yml index 63e59665b..495c37509 100644 --- a/data/Lunt_2012/metadata.yml +++ b/data/Lunt_2012/metadata.yml @@ -144,11 +144,6 @@ taxonomic_updates: replace: Rytidosperma nudiflorum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Taraxacum sp. [Taraxacum sp. aff. brakelii] - replace: Taraxacum sp. [Taraxacum sp. [Taraxacum sp. aff. brakelii]; Lunt_2012] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Taraxacum sp. aff. brakelii replace: Taraxacum sp. [Taraxacum sp. aff. brakelii; Lunt_2012] reason: match_09. Rewording taxon with term `affinis` preceding species epithet diff --git a/data/Maslin_2012/metadata.yml b/data/Maslin_2012/metadata.yml index 07c023a87..fcc51351a 100644 --- a/data/Maslin_2012/metadata.yml +++ b/data/Maslin_2012/metadata.yml @@ -367,9 +367,5 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Acacia sp. Kununurra (G.Lullfitz 6195] - replace: Acacia sp. Kununurra (G.Lullfitz 6195) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species exclude_observations: .na questions: .na diff --git a/data/McGlone_2015/metadata.yml b/data/McGlone_2015/metadata.yml index 503a2431a..67af09fc5 100644 --- a/data/McGlone_2015/metadata.yml +++ b/data/McGlone_2015/metadata.yml @@ -248,10 +248,6 @@ taxonomic_updates: replace: Correa aemula reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Cratistylis conocephala - replace: Cratystylis conocephala - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Cratostylis conocephala replace: Cratystylis conocephala reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -378,10 +374,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Ozothamnus phoditotus - replace: Ozothamnus pholidotus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Ozothamnus pholitotus replace: Ozothamnus pholidotus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/Mesaglio_2022/data.csv b/data/Mesaglio_2022/data.csv index 43d46968b..4f34d8786 100644 --- a/data/Mesaglio_2022/data.csv +++ b/data/Mesaglio_2022/data.csv @@ -291,8 +291,8 @@ Caesia parviflora R.Br.,2022,October,NA,NA,Caesia parviflora Hypoxis hygrometrica var. villosisepala R.J.F.Hend.,2021,March,April,NA,Hypoxis hygrometrica var. villosisepala Hypoxis hygrometrica var. villosisepala R.J.F.Hend.,2021,December,NA,NA,Hypoxis hygrometrica var. villosisepala Hypoxis hygrometrica var. villosisepala R.J.F.Hend.,2022,February,April,NA,Hypoxis hygrometrica var. villosisepala -Crocosmia x crocosmiiflora (Lemoine ex É.Morren) N.E.Br.,2021,January,NA,NA,Crocosmia x crocosmiiflora -Crocosmia x crocosmiiflora (Lemoine ex É.Morren) N.E.Br.,2023,January,NA,NA,Crocosmia x crocosmiiflora +Crocosmia x crocosmiiflora (Lemoine ex �.Morren) N.E.Br.,2021,January,NA,NA,Crocosmia x crocosmiiflora +Crocosmia x crocosmiiflora (Lemoine ex �.Morren) N.E.Br.,2023,January,NA,NA,Crocosmia x crocosmiiflora Dietes grandiflora N.E.Br.,2020,September,NA,NA,Dietes grandiflora Dietes grandiflora N.E.Br.,2021,October,December,NA,Dietes grandiflora Freesia hybrid,2020,September,NA,NA,Freesia hybrid diff --git a/data/Mesaglio_2022/metadata.yml b/data/Mesaglio_2022/metadata.yml index 5e6c3671e..656bb5fcf 100644 --- a/data/Mesaglio_2022/metadata.yml +++ b/data/Mesaglio_2022/metadata.yml @@ -18,7 +18,7 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( location_name = "Duck River", Year2 = Year, @@ -28,7 +28,7 @@ dataset: flowering_time = case_when( !is.na(month_start) & !is.na(month_end) & month_start != month_end ~ format_flowering_months(month_start, month_end), - month_start == month_end ~ + month_start == month_end ~ format_flowering_months(month_start, month_start - 1), is.na(month_end) ~ format_flowering_months(month_start, month_start) @@ -37,7 +37,7 @@ dataset: group_by(canonical_name) %>% mutate(repeat_measurement = row_number()) %>% ungroup() - ' + ' collection_date: Year taxon_name: canonical_name location_name: location_name @@ -139,10 +139,6 @@ taxonomic_updates: replace: Hippeastrum x reason: Manual alignment to genus level taxon (E. Wenk, 2023-03-23) taxonomic_resolution: genus -- find: Taraxacum officinale F.H.Wigg. - replace: Taraxacum officinale - reason: Manual alignment to APC accepted taxon (E. Wenk, 2023-03-23) - taxonomic_resolution: species exclude_observations: - variable: taxon_name find: Rothmannia globosa diff --git a/data/Morgan_2014/metadata.yml b/data/Morgan_2014/metadata.yml index 2a1e87c3a..08f2d7723 100644 --- a/data/Morgan_2014/metadata.yml +++ b/data/Morgan_2014/metadata.yml @@ -119,10 +119,6 @@ taxonomic_updates: replace: Brachyscome spathulata subsp. spathulata reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Brachysome spatulatha subsp. spathulata - replace: Brachyscome spathulata subsp. spathulata - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: subspecies - find: Brachysome stolonifera replace: Brachyscome stolonifera reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) diff --git a/data/NHNSW_2014_2/metadata.yml b/data/NHNSW_2014_2/metadata.yml index 561ffd825..fc4b34b9f 100644 --- a/data/NHNSW_2014_2/metadata.yml +++ b/data/NHNSW_2014_2/metadata.yml @@ -19,43 +19,43 @@ dataset: custom_R_code: ' check_months <- function(x){(1:12 %in% x %>% as.integer() %>% paste(collapse=""))}; - fruiting <- - data %>% - filter(trait == "fruiting", lookup_id <= 13) %>% + fruiting <- + data %>% + filter(trait == "fruiting", lookup_id <= 13) %>% select(species, lookup_id) %>% group_by(species) %>% nest(months = c(lookup_id)) %>% - mutate(trait = "fruiting_time", lookup_data = map_chr(months, + mutate(trait = "fruiting_time", lookup_data = map_chr(months, ~check_months(.x$lookup_id)) %>% convert_01_ny) %>% select(-months); - flowering <- - data %>% - filter(trait == "flowering month", lookup_id <= 13) %>% + flowering <- + data %>% + filter(trait == "flowering month", lookup_id <= 13) %>% select(species, lookup_id) %>% group_by(species) %>% nest(months = c(lookup_id)) %>% - mutate(trait = "flowering_time", lookup_data = map_chr(months, + mutate(trait = "flowering_time", lookup_data = map_chr(months, ~check_months(.x$lookup_id)) %>% convert_01_ny) %>% select(-months); growth_habit <- data %>% filter(lookup_data == "creeper rooting along stems") %>% mutate(trait = "growth_habit", lookup_data = "creeping"); - + clonal <- data %>% filter(lookup_data == "creeper rooting along stems") %>% mutate(trait = "clonal_spread_mechanism", lookup_data = "aboveground_clonal"); - + scales <- data %>% mutate(trait = ifelse(str_detect(lookup_data, "scales"), "leaf_type", trait)) %>% - filter(trait == "leaf_type") %>% + filter(trait == "leaf_type") %>% mutate(lookup_data = "scale"); - + collapsed <- - data %>% + data %>% filter(!trait %in% c("fruiting","flowering month")) %>% mutate( trait = ifelse(lookup_data == "prostrate", "growth_habit", trait), @@ -64,16 +64,16 @@ dataset: trait = ifelse(str_detect(lookup_data,"epiphytic"), "growth_substrate", trait), trait = ifelse(lookup_data == "aquatic", "growth_substrate", trait), trait = ifelse(trait == "special growth form", "growth form", trait), - lookup_data = str_replace(lookup_data,"toothed or lobed","toothed_or_lobed") + lookup_data = str_replace(lookup_data,"toothed or lobed","toothed_or_lobed") ) %>% select(species, trait, units, lookup_data) %>% - group_by(species, trait, units) %>% + group_by(species, trait, units) %>% summarise( lookup_data = paste0(lookup_data, collapse = " ") - ) %>% + ) %>% ungroup() %>% distinct(species, trait, units, lookup_data); - + bind_rows( collapsed, fruiting, @@ -890,10 +890,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Agropogon lutosus - replace: x Agropogon lutosus - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Agrostis sp. B sensu Jacobs & Hastings (1993) replace: Agrostis sp. B reason: match_14. Automatic alignment with species-level name known by APC when @@ -947,11 +943,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Brassica x juncea - replace: Brassica x juncea - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: species - find: Brassica juncea replace: Brassica x juncea reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -971,20 +962,11 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Calamagrostis benthamiana - replace: Eragrostis benthamii - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Calandrinia sp. A sensu Harden (1990) replace: Calandrinia sp. A reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Calandrinia sp. Nerriga (I.R.H.Telford 8677) NSW Herbarium - replace: Calandrinia sp. Nerriga (I.R.H.Telford 8677) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Cassinia adunca replace: Cassinia x adunca reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -1048,10 +1030,6 @@ taxonomic_updates: replace: Craspedia maxgrayi reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Crepidomanes minutum - replace: Trichomanes minutum - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Cryptandra sp. A sensu Harden (1990) replace: Cryptandra sp. A reason: match_19. Automatic alignment with species-level canonical name in APNI @@ -1105,10 +1083,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Erigeron primulifolium - replace: Erigeron primulifolius - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Eriochlamys sp. A sensu Brown (1992) replace: Eriochlamys sp. A reason: match_14. Automatic alignment with species-level name known by APC when @@ -1123,11 +1097,6 @@ taxonomic_updates: replace: Frankenia sp. A reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species -- find: Gaura mollis - replace: Oenothera sp. [Gaura mollis; NHNSW_2014_2] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-10) - taxonomic_resolution: genus - find: Gnaphalium sp. E sensu Everett (1992) replace: Gnaphalium sp. E (aff. argentifolium) reason: match_14. Automatic alignment with species-level name known by APC when @@ -1223,11 +1192,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Malva multiflora - replace: Malva sp. [Malva multiflora; NHNSW_2014_2] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Melichrus hirsutus J.B.Williams ms. replace: Melichrus hirsutus reason: match_14. Automatic alignment with species-level name known by APC when @@ -1260,11 +1224,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Pelargonium x asperum - replace: Pelargonium x asperum - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: species - find: Pelargonium asperum replace: Pelargonium x asperum reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -1433,10 +1392,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Sida abutilifolia - replace: Sida abutilon - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species - find: Sida sp. A sensu Harden (1990) replace: Sida sp. A reason: match_14. Automatic alignment with species-level name known by APC when @@ -1457,10 +1412,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Sonchus megalocarpa - replace: Sonchus megalocarpus - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Spergularia sp. B sensu Doust (1990) replace: Spergularia sp. B reason: match_14. Automatic alignment with species-level name known by APC when @@ -1470,11 +1421,6 @@ taxonomic_updates: replace: Sporobolus diandrus reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Sporobolus sp. [Sporobolus diander] - replace: Sporobolus sp. [Sporobolus diander; NHNSW_2014_2] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Stellaria sp. B sensu Doust (1990) replace: Stellaria sp. B reason: match_14. Automatic alignment with species-level name known by APC when @@ -1510,11 +1456,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Thelymitra x merraniae - replace: Thelymitra x merraniae - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: species - find: Trochocarpa sp. A sensu Wiecek (1992) replace: Trochocarpa sp. A reason: match_14. Automatic alignment with species-level name known by APC when @@ -1540,16 +1481,5 @@ taxonomic_updates: reason: Manual match to genus for taxon that can't be match to species (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: genus -- find: Zehneria minutiflora - replace: Zieria minutiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -exclude_observations: -- variable: taxon_name - find: Gaura mollis, Opuntia macrorhiza subsp. pottsii, Ranunculus aquatilis var. - diffusus - reason: non-native (North America) -- variable: taxon_name - find: Cleome houtteana - reason: non-native (South America) +exclude_observations: .na questions: .na diff --git a/data/NHNSW_2022/metadata.yml b/data/NHNSW_2022/metadata.yml index 22aa4da79..04aa06d24 100644 --- a/data/NHNSW_2022/metadata.yml +++ b/data/NHNSW_2022/metadata.yml @@ -159,10 +159,6 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Alstonia constricta f. Pubescent form - replace: Alstonia constricta Pubescent form - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Arthropteris beckleri x tenella replace: Arthropteris x [Arthropteris beckleri x tenella] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -245,10 +241,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-21) taxonomic_resolution: variety -- find: Flacourtia sp. shiptons flat l w jessup gj.d3200 - replace: Flacourtia sp. Shiptons Flat (L.W.Jessup+ GJD3200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Genoplesium cuspidatum replace: Genoplesium sp. Cuspidata (L.M.Copeland 3858) reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name @@ -349,11 +341,6 @@ taxonomic_updates: replace: Pimelea neoanglica reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Polyscias sambucifolia subsp. Long leaflets (P.G.Neish 208) Vic. Herbarium - replace: Polyscias sambucifolia subsp. Long leaflets (P.G.Neish 208) - reason: match_05. Automatic alignment with scientific name in APC accepted list - (2022-11-21) - taxonomic_resolution: subspecies - find: Pomaderris andromedifolia f. ;qu;andromedifolia;qu; replace: Pomaderris andromedifolia subsp. andromedifolia reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) @@ -494,18 +481,13 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: X Triticosecale - replace: x Triticosecale - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus exclude_observations: - variable: taxon_name find: Salix humboldtiana cv. ;qu;Pyramidalis;qu;, Salix matsudana cv. ;qu;Tortuosa;qu; reason: excluding cultivars - variable: taxon_name find: Cipadessa baccifera, Hoffmannseggia glauca, Houttuynia cordata, Margyricarpus - pinnatus, Radermachera sinica, x Triticosecale, Euryops virgineus, Fraxinus chinensis, + pinnatus, Radermachera sinica, X Triticosecale, Euryops virgineus, Fraxinus chinensis, Ipomoea fimbriosepala, Persicaria chinensis, Pteris nipponica, Passiflora miniata reason: non-native, non-naturalised species questions: .na diff --git a/data/NHNSW_2023/metadata.yml b/data/NHNSW_2023/metadata.yml index e0be08562..e1c3cf854 100644 --- a/data/NHNSW_2023/metadata.yml +++ b/data/NHNSW_2023/metadata.yml @@ -60,7 +60,7 @@ dataset: entity_measured = ifelse(category %in% c("submerged_leaf", "submerged_lamina", "submerged_leaves","submerged_leaves_blade", "submerged_blade"), "submerged_leaf", entity_measured), entity_measured = ifelse(category %in% c("sterile_leaf", "sterile_lamina", "sterile_fronds", "sterile_leaves"), "sterile_leaf", entity_measured), entity_measured = ifelse(category %in% c("fertile_leaf", "fertile_fronds", "fertile_lamina", "fertile_frond", "fertile_leaves"), "fertile_leaf", entity_measured), - entity_measured = ifelse(category %in% c("leaflets", "trifoliate_leaves", "laminae", "leaflet", "lateral_leaflets", "terminal_leaflets", "simple_leaves_and_leaflets", "terminal_leaflets_simple_leaves", "leaves_simple_leaflets", "leafletlamina", "terminal_leaflet", "lateral_leaflet" , "basal_leaflets", "sterile_leaflets", "fertile_leaflets", "upper_leaflets", "lower_leaflets", "segmented_leaves", "floating_leaflets", "primary_leaflets", "secondary_leaflets", "submerged_leaflets"), "leaflet", entity_measured), + entity_measured = ifelse(category %in% c("leaflets", "trifoliate_leaves", "laminae", "leaflet", "lateral_leaflets", "terminal_leaflets", "simple_leaves_and_leaflets", "terminal_leaflets_simple_leaves", "leaves_simple_leaflets", "leafletlamina", "terminal_leaflet", "lateral_leaflet" , "basal_leaflets", "sterile_leaflets", "fertile_leaflets", "upper_leaflets", "lower_leaflets", "segmented_leaves", "floating_leaflets", "primary_leaflets", "secondary_leaflets", "submerged_leaflets"), "leaflet", entity_measured), entity_measured = ifelse(category %in% c("pinnule", "pinnules", "secondary_pinnae", "longest_secondary_pinnae"), "secondary_pinnae", entity_measured), entity_measured = ifelse(category %in% c("tertiary_pinnae"), "tertiary_pinnae", entity_measured), entity_measured = ifelse(category %in% c("quaternary_pinnae"), "quaternary_pinnae", entity_measured), @@ -90,7 +90,7 @@ dataset: entity_measured = ifelse(category %in% c("disc_achenes"), "disc_achenes", entity_measured), entity_measured = ifelse(category %in% c("ray_achenes"), "ray_achenes", entity_measured), entity_measured = ifelse(category %in% c("valve", "valves"), "valve", entity_measured), - entity_measured = ifelse(category %in% c("pappus"), "pappus", entity_measured), + entity_measured = ifelse(category %in% c("pappus"), "pappus", entity_measured), entity_measured = ifelse(category %in% c("capsule", "silicula", "nut", "utricles", "pyrenes", "berry", "achenes"), "fruit", entity_measured), ) %>% arrange(category) %>% @@ -99,7 +99,7 @@ dataset: group_by(taxon_name, trait_name, entity_measured, value_type) %>% mutate(observation_number = row_number()) %>% ungroup() - ' + ' collection_date: unknown/2022 taxon_name: taxon_name trait_name: trait_name @@ -523,10 +523,6 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Alstonia constricta f. Pubescent form - replace: Alstonia constricta Pubescent form - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Arthropteris beckleri x tenella replace: Arthropteris x [Arthropteris beckleri x tenella] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -609,10 +605,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-21) taxonomic_resolution: variety -- find: Flacourtia sp. shiptons flat l w jessup gj.d3200 - replace: Flacourtia sp. Shiptons Flat (L.W.Jessup+ GJD3200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Genoplesium cuspidatum replace: Genoplesium sp. Cuspidata (L.M.Copeland 3858) reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name @@ -717,11 +709,6 @@ taxonomic_updates: replace: Pimelea neoanglica reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Polyscias sambucifolia subsp. Long leaflets (P.G.Neish 208) Vic. Herbarium - replace: Polyscias sambucifolia subsp. Long leaflets (P.G.Neish 208) - reason: match_05. Automatic alignment with scientific name in APC accepted list - (2022-11-21) - taxonomic_resolution: subspecies - find: Pomaderris andromedifolia f. ;qu;andromedifolia;qu; replace: Pomaderris andromedifolia subsp. andromedifolia reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) @@ -862,18 +849,13 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: X Triticosecale - replace: x Triticosecale - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus exclude_observations: - variable: taxon_name find: Salix humboldtiana cv. ;qu;Pyramidalis;qu;, Salix matsudana cv. ;qu;Tortuosa;qu; reason: excluding cultivars - variable: taxon_name find: Cipadessa baccifera, Hoffmannseggia glauca, Houttuynia cordata, Margyricarpus - pinnatus, Radermachera sinica, x Triticosecale, Euryops virgineus, Fraxinus chinensis, + pinnatus, Radermachera sinica, X Triticosecale, Euryops virgineus, Fraxinus chinensis, Ipomoea fimbriosepala, Persicaria chinensis, Pteris nipponica, Passiflora miniata reason: non-native, non-naturalised species questions: .na diff --git a/data/NSWFRD_2014/metadata.yml b/data/NSWFRD_2014/metadata.yml index e791e4b84..7662bd52c 100644 --- a/data/NSWFRD_2014/metadata.yml +++ b/data/NSWFRD_2014/metadata.yml @@ -34,7 +34,7 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( seed_longevity_categorical = `Seed storage`, flowering_time_edited = convert_month_range_vec_to_binary(flowering_time_edited), @@ -462,9 +462,6 @@ substitutions: - trait_name: seedbank_location find: persistent soil replace: soil_seedbank -- trait_name: post_fire_recruitment - find: <1 seedling per adult - replace: post_fire_recruitment_absent - trait_name: post_fire_recruitment find: <1 seedling per adult (100), prolific (105) replace: post_fire_recruitment_absent post_fire_recruitment @@ -1018,9 +1015,6 @@ substitutions: - trait_name: seedbank_location find: persistent (6) / transient (49) replace: .na -- trait_name: seedbank_location - find: persistent soil - replace: soil_seedbank - trait_name: seedbank_location find: persistent soil / canopy replace: canopy_seedbank soil_seedbank @@ -2021,11 +2015,6 @@ taxonomic_updates: replace: Bossiaea neoanglica reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Callistemon sp. Torrington (H.J.Wismann NE36256) NE Herbarium - replace: Callistemon sp. Torrington (H.J.Wismann NE36256) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Callistemon sp. aff. flavovirens replace: Callistemon sp. [Callistemon sp. aff. flavovirens; NSWFRD_2014] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -2191,11 +2180,6 @@ taxonomic_updates: reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: subspecies -- find: Phebalium sylvestre - replace: Phebalium sp. [Phebalium sylvestre; NSWFRD_2014] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-22) - taxonomic_resolution: genus - find: Phebalium sylvestre ms replace: Phebalium sp. [Phebalium sylvestre; NSWFRD_2014] reason: Exact match of the first word of the taxon name to an APC-accepted genus diff --git a/data/NTH_2014/metadata.yml b/data/NTH_2014/metadata.yml index 65fc47516..a0d65ca92 100644 --- a/data/NTH_2014/metadata.yml +++ b/data/NTH_2014/metadata.yml @@ -17,13 +17,13 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( - `flowering time` = convert_month_range_vec_to_binary(`flowering time`), - `fruiting` = convert_month_range_vec_to_binary(`fruiting`), - leaf_type = ifelse(`leaf type` == "articles", "cladode", NA), - `leaf type` = ifelse(`leaf type` == "articles", NA, `leaf type`), - leaf_lobed = ifelse(`leaf type` == "l", "lobed", NA), + `flowering time` = convert_month_range_vec_to_binary(`flowering time`), + `fruiting` = convert_month_range_vec_to_binary(`fruiting`), + leaf_type = ifelse(`leaf type` == "articles", "cladode", NA), + `leaf type` = ifelse(`leaf type` == "articles", NA, `leaf type`), + leaf_lobed = ifelse(`leaf type` == "l", "lobed", NA), GF = ifelse(aquatic %in% c("yes","y"),"herb", GF), GF = ifelse(succulent %in% c("yes","y"),"succulent_short herb", GF), parasitic = ifelse(GF=="parasite","parasitic",NA), @@ -35,7 +35,7 @@ dataset: plant_photosynthetic_organ3 = NA ) %>% move_values_to_new_trait( - "dispersal appendage", "fruit_type", + "dispersal appendage", "fruit_type", c("drupe", "samara"), c("drupe", "samara"), c("NA", "wings") @@ -44,11 +44,11 @@ dataset: `dispersal appendage` = ifelse(`dispersal appendage` == "NA", NA, `dispersal appendage`) ) %>% move_values_to_new_trait( - "leaf shape", "leaf_lobation", + "leaf shape", "leaf_lobation", c("lobed"), c("lobed"), c("") ) %>% move_values_to_new_trait( - "leaf shape", "leaf_lamina_division", + "leaf shape", "leaf_lamina_division", "palmately lobed", "palmately_lobed", "" ) %>% move_values_to_new_trait( @@ -72,16 +72,16 @@ dataset: c("succulent", "succulent"), c("herb", "herb") ) %>% - separate_range("leaf length (mm)", "leaf_length_min", "leaf_length_max") %>% + separate_range("leaf length (mm)", "leaf_length_min", "leaf_length_max") %>% separate_range("leaf width (mm)", "leaf_width_min", "leaf_width_max") %>% - separate_range("seed length (mm)", "seed_length_min", "seed_length_max") %>% - separate_range("seed diameter (mm)", "seed_width_min", "seed_width_max") %>% + separate_range("seed length (mm)", "seed_length_min", "seed_length_max") %>% + separate_range("seed diameter (mm)", "seed_width_min", "seed_width_max") %>% separate_range("seed depth (mm)", "seed_depth_min", "seed_depth_max") %>% mutate( across(everything(), ~as.character(.x)), across(everything(), ~na_if(.x, "")) ) - ' + ' collection_date: unknown/2014 taxon_name: species_name description: 'Transposed from species descriptions in Flora of the Darwin Region @@ -412,9 +412,6 @@ substitutions: - trait_name: dispersal_appendage find: winged seed replace: wings -- trait_name: leaf_shape - find: linear-oblanceolate - replace: narrowly_oblanceolate - trait_name: leaf_shape find: palmately lobed replace: .na diff --git a/data/NTH_2022/metadata.yml b/data/NTH_2022/metadata.yml index 94bc915e6..23dc2797d 100644 --- a/data/NTH_2022/metadata.yml +++ b/data/NTH_2022/metadata.yml @@ -165,10 +165,6 @@ taxonomic_updates: replace: Acacia sp. Lake Woods reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Acacia sp. holey trunk - replace: Acacia sp. Mulga Holey Trunk (P.K.Latz 12458) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species - find: Acacia sp. laterite replace: Acacia sp. Laterite (I.D.Cowie 8754) reason: match_14. Automatic alignment with species-level canonical name in APC accepted diff --git a/data/NTH_2023/metadata.yml b/data/NTH_2023/metadata.yml index 175736acd..2db046a44 100644 --- a/data/NTH_2023/metadata.yml +++ b/data/NTH_2023/metadata.yml @@ -487,10 +487,6 @@ taxonomic_updates: replace: Acacia sp. Lake Woods reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Acacia sp. holey trunk - replace: Acacia sp. Mulga Holey Trunk (P.K.Latz 12458) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species - find: Acacia sp. laterite replace: Acacia sp. Laterite (I.D.Cowie 8754) reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -514,11 +510,6 @@ taxonomic_updates: replace: Burmannia championii reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Caesia sp. Mt Zeil - replace: Caesia sp. Mt Zeil (G.Griffin 05/Oct/91) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Cajanus sp. Purnululu replace: Cajanus sp. Purnululu (I.D.Cowie 783) I.D.Cowie reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -547,15 +538,6 @@ taxonomic_updates: replace: Centrolepis sp. squamose seeds (P.K.Latz 3581) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Cereus hildmannianus - replace: Cereus hildmannianus - reason: maintaining name of invasive plant not yet in APC, but in several datasets (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Commelina sp. sandstone - replace: Commelina sp. Sandstone (R.J.Fensham 739) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Dentella arnhemensis replace: Dentella arnhemensis MS reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -660,11 +642,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Murdannia sp. Top End - replace: Murdannia sp. Top End (G.M.Chippendale 7726) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Notelaea sp. Elcho Island replace: Notelaea sp. (Elcho Island) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) @@ -856,11 +833,6 @@ taxonomic_updates: replace: Spermacoce gilliesae reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Stackhousia sp. leafless - replace: Stackhousia sp. leafless (I.D.Cowie 140078) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Stemodia sp. Tanami replace: Stemodia sp. Tanami (P.K.Latz 8218) reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -875,11 +847,6 @@ taxonomic_updates: replace: Terminalia sp. Black Point (D20544) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: species -- find: Triglochin sp. Newhaven - replace: Triglochin sp. Newhaven (P.Latz 16797) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Triodia sp. Dinner Creek replace: Triodia sp. Dinner Creek (K.G.Brennan 11241) reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -888,7 +855,7 @@ taxonomic_updates: replace: Triodia sp. Matt Wilson (I.D.Cowie 2446 & P.S.Brocklehurst) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) - taxonomic_resolution: speciessp. Charles + taxonomic_resolution: species - find: Triumfetta sp. Bradshaw replace: Triumfetta sp. Bradshaw (B.M.Stuckey 57) reason: match_14. Automatic alignment with species-level canonical name in APC accepted diff --git a/data/Nano_2011/metadata.yml b/data/Nano_2011/metadata.yml index c5602064e..5d24477d1 100644 --- a/data/Nano_2011/metadata.yml +++ b/data/Nano_2011/metadata.yml @@ -615,7 +615,7 @@ taxonomic_updates: - find: Cartonema sp. tufted (L.A.Craven 2323) Conran replace: Cartonema sp. tufted (L.A.Craven 2323) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: speciess + taxonomic_resolution: species - find: Centrolepis sp. carinate (L.A.Craven & C.R.Dunlop 6668) WA Herbarium replace: Centrolepis sp. carinate (L.A.Craven & C.R.Dunlop 6668) reason: Exact match of taxon name to an APC-accepted scientific name (including @@ -675,10 +675,6 @@ taxonomic_updates: replace: Cycas x [Cycas armstrongii x Cycas conferta] reason: Manual alignment to APC accepted genus, because hybrid taxon (E. Wenk, 2023-11-02) taxonomic_resolution: genus -- find: Cycas armstrongii x - replace: Cycas x [Cycas armstrongii x Cycas maconochiei] - reason: Manual alignment to APC accepted genus, because hybrid taxon (E. Wenk, 2023-11-02) - taxonomic_resolution: genus - find: Cycas arnhemica x replace: Cycas x [Cycas arnhemica x Cycas orientis] reason: Manual alignment to APC accepted genus, because hybrid taxon (E. Wenk, 2023-11-02) @@ -878,6 +874,8 @@ taxonomic_updates: taxonomic_resolution: species - find: Haemodorum sp. Cobourg Peninsula (I.D.Cowie10416) R.L.Barrett replace: Haemodorum sp. Cobourg Peninsula (I.D.Cowie10416) + reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) + taxonomic_resolution: species - find: Haemodorum sp. Wildman River (I.D.Cowie 13660 & N.Cuff) Cowie & Cuff replace: Haemodorum sp. Wildman River (I.D.Cowie 13660 & N.Cuff) reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -924,11 +922,6 @@ taxonomic_updates: replace: Hymenachne x calamitosa reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) taxonomic_resolution: species -- find: Indigofera - replace: Indigofera sp. [Indigofera; Nano_2011] - reason: Exact match of the first word of the taxon name to an APC-accepted genus - (2023-11-02) - taxonomic_resolution: genus - find: Indigofera sp. MacDonnell Ranges (P.K.Latz 11587) Peter Wilson replace: Indigofera sp. MacDonnell Ranges (P.K.Latz 11587) reason: Exact match of the first three words of the taxon name to an APC-known canonical @@ -994,6 +987,8 @@ taxonomic_updates: taxonomic_resolution: species - find: Malvastrum sp. limestone (I.D.Cowie 14531) Cowie replace: Malvastrum sp. limestone (I.D.Cowie 14531) + reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) + taxonomic_resolution: species - find: Medicago littoralis x replace: Medicago x [Medicago littoralis x Medicago truncatula] reason: Manual alignment to APC accepted genus, because hybrid taxon (E. Wenk, 2023-11-02) @@ -1168,11 +1163,6 @@ taxonomic_updates: reason: Exact match of the first three words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. artemisioides - replace: Senna artemisioides subsp. x artemisioides - reason: Exact match of the first three words of the taxon name to an APC-accepted - canonical name (2023-11-02) - taxonomic_resolution: subspecies - find: Senna artemisioides subsp. concave replace: Senna artemisioides reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -1183,16 +1173,6 @@ taxonomic_updates: reason: Exact match of the first three words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. coriacea - replace: Senna artemisioides subsp. x coriacea - reason: Exact match of the first three words of the taxon name to an APC-accepted - canonical name (2023-11-02) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. petiolaris - replace: Senna artemisioides subsp. x petiolaris - reason: Exact match of the first three words of the taxon name to an APC-accepted - canonical name (2023-11-02) - taxonomic_resolution: subspecies - find: Senna artemisioides subsp. petiolaris replace: Senna artemisioides subsp. x petiolaris reason: Exact match of the first three words of the taxon name to an APC-accepted @@ -1203,15 +1183,6 @@ taxonomic_updates: reason: Exact match of the first three words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. sturtii - replace: Senna artemisioides subsp. x sturtii - reason: Exact match of the first three words of the taxon name to an APC-accepted - canonical name (2023-11-02) - taxonomic_resolution: subspecies -- find: Senna surattensis f.) H.S.Irwin - replace: Senna surattensis subsp. sulfurea - reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: subspecies - find: Senna surattensis f.) H.S.Irwin replace: Senna surattensis subsp. surattensis reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) @@ -1280,17 +1251,9 @@ taxonomic_updates: reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species - find: Synaptantha tillaeacea f. var. - replace: Synaptantha tillaeacea var. Western Tanami (D.E.Albrecht 7852) - reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: variety -- find: Synaptantha tillaeacea f. var. - replace: Synaptantha tillaeacea var. hispidula - reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: variety -- find: Synaptantha tillaeacea f. var. - replace: Synaptantha tillaeacea var. tillaeacea + replace: Synaptantha tillaeacea reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: variety + taxonomic_resolution: species - find: Synostemon sp. Mann River (I.D.Cowie 8724) replace: Synostemon sp. Mann River (I.D.Cowie 8724) reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -1397,17 +1360,9 @@ taxonomic_updates: reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species - find: Trichodesma zeylanicum f.) R.Br. - replace: Trichodesma zeylanicum var. grandiflorum - reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: variety -- find: Trichodesma zeylanicum f.) R.Br. - replace: Trichodesma zeylanicum var. latisepaleum - reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: variety -- find: Trichodesma zeylanicum f.) R.Br. - replace: Trichodesma zeylanicum var. zeylanicum + replace: Trichodesma zeylanicum reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-02) - taxonomic_resolution: variety + taxonomic_resolution: species - find: Tricoryne sp. divaricate (D.E. Albrecht 12766 & P.K. Latz) replace: Tricoryne sp. divaricate (D.E. Albrecht 12766 & P.K. Latz) reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) diff --git a/data/Nicolle_2006/metadata.yml b/data/Nicolle_2006/metadata.yml index 66abd3454..2cd0afed9 100644 --- a/data/Nicolle_2006/metadata.yml +++ b/data/Nicolle_2006/metadata.yml @@ -409,11 +409,6 @@ taxonomic_updates: replace: Eucalyptus aurifodina reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus balanopelex - replace: Eucalyptus x balanopelex - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-12) - taxonomic_resolution: species - find: Eucalyptus binacag replace: Eucalyptus binacag reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -464,18 +459,14 @@ taxonomic_updates: APC (2022-11-10) taxonomic_resolution: subspecies - find: Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923) - replace: Eucalyptus dalrympleana - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species + replace: Eucalyptus dalrympleana subsp. Tasmania (Nicolle 4923) + reason: Manual alignment with canonical name with rank `subspecies` in APC (Elizabeth + Wenk, 2022-11-12) + taxonomic_resolution: subspecies - find: Eucalyptus decipens replace: Eucalyptus decipiens reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus decipies - replace: Eucalyptus decipiens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus deglupta replace: Eucalyptus decepta reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -545,10 +536,9 @@ taxonomic_updates: and filler words are removed (2023-11-02) taxonomic_resolution: subspecies - find: Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066) - replace: Eucalyptus mannifera - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species + replace: Eucalyptus mannifera subsp. Alpine Victoria (Nicolle 2066) + reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) + taxonomic_resolution: subspecies - find: Eucalyptus marginata subsp. Dull leaf replace: Eucalyptus marginata reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -622,10 +612,6 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Eucalyptus rotunda - replace: Eucalyptus rotunda - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Eucalyptus rotunda ms replace: Eucalyptus rotunda reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -726,14 +712,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus sp. Mt Short (D.Nicolle & M.French DN 3575 ) - replace: Eucalyptus sp. Mt Short (D.Nicolle & M.French DN 3575) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Eucalyptus sp. Mukinbudin (D.Nicolle & M.French DN 3486 ) - replace: Eucalyptus sp. Mukinbudin (D.Nicolle & M.French DN 3486) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus sp. Mukinbudin (Nicolle 3486 & French) replace: Eucalyptus sp. Mukinbudin (D.Nicolle & M.French DN 3486) reason: match_14. Automatic alignment with species-level name known by APC when @@ -789,7 +767,7 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Eucalyptus tasmaniensis +- find: Eucalyptus tasmaniensis ms replace: Eucalyptus tasmaniensis reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species @@ -873,11 +851,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus x desquamata - replace: Eucalyptus x [Eucalyptus x desquamata; Nicolle_2006] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus - find: Eucalyptus x desquamata ms replace: Eucalyptus x [Eucalyptus x desquamata; Nicolle_2006] reason: Exact match to APC genus. Taxon name includes ' x ' indicating a hybrid @@ -913,10 +886,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus x solitaris - replace: Eucalyptus x [Eucalyptus x solitaris] - reason: Manual alignment to genus indicating hybrid taxon (Elizaneth Wenk, 2022-11-22) - taxonomic_resolution: genus - find: Eucalyptus x solitaris ms replace: Eucalyptus x [Eucalyptus x solitaris; Nicolle_2006] reason: Exact match to APC genus. Taxon name includes ' x ' indicating a hybrid @@ -946,117 +915,112 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus yumbarrana subsp. striata - replace: Eucalyptus yumbarrana subsp. x striata - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: subspecies -- find: '[Corymbia x chillagoensis]' +- find: 'Corymbia x chillagoensis' replace: Corymbia x chillagoensis reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Corymbia x opacula]' +- find: 'Corymbia x opacula' replace: Corymbia x opacula reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Corymbia x pedimontana]' +- find: 'Corymbia x pedimontana' replace: Corymbia x pedimontana reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x alpina]' +- find: 'Eucalyptus x alpina' replace: Eucalyptus x alpina reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x balanites]' +- find: 'Eucalyptus x balanites' replace: Eucalyptus x balanites reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x balanopelex]' +- find: 'Eucalyptus x balanopelex' replace: Eucalyptus x balanopelex reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x bennettiae]' +- find: 'Eucalyptus x bennettiae' replace: Eucalyptus x bennettiae reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x brachyphylla]' +- find: 'Eucalyptus x brachyphylla' replace: Eucalyptus x brachyphylla reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x carnabyi]' +- find: 'Eucalyptus x carnabyi' replace: Eucalyptus x carnabyi reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x chrysantha]' +- find: 'Eucalyptus x chrysantha' replace: Eucalyptus x chrysantha reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x conjuncta]' +- find: 'Eucalyptus x conjuncta' replace: Eucalyptus x conjuncta reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x erythrandra]' +- find: 'Eucalyptus x erythrandra' replace: Eucalyptus x erythrandra reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x graniticola]' +- find: 'Eucalyptus x graniticola' replace: Eucalyptus graniticola reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-12) taxonomic_resolution: species -- find: '[Eucalyptus x impensa]' +- find: 'Eucalyptus x impensa' replace: Eucalyptus x impensa reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x intrasilvatica]' +- find: 'Eucalyptus x intrasilvatica' replace: Eucalyptus x intrasilvatica reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x macmahonii]' +- find: 'Eucalyptus x macmahonii' replace: Eucalyptus x macmahonii reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x mcintyrensis]' +- find: 'Eucalyptus x mcintyrensis' replace: Eucalyptus x mcintyrensis reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x oxypoma]' +- find: 'Eucalyptus x oxypoma' replace: Eucalyptus x oxypoma reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x patentinervis]' +- find: 'Eucalyptus x patentinervis' replace: Eucalyptus x patentinervis reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x phylacis]' +- find: 'Eucalyptus x phylacis' replace: Eucalyptus x phylacis reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x studleyensis]' +- find: 'Eucalyptus x studleyensis' replace: Eucalyptus x studleyensis reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: species -- find: '[Eucalyptus x tetragona]' +- find: 'Eucalyptus x tetragona' replace: Eucalyptus x tetragona reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) diff --git a/data/Purdie_1976/metadata.yml b/data/Purdie_1976/metadata.yml index e64017003..de1ab67bc 100644 --- a/data/Purdie_1976/metadata.yml +++ b/data/Purdie_1976/metadata.yml @@ -477,7 +477,7 @@ taxonomic_updates: replace: Epilobium billardiereanum subsp. cinereum reason: Manual alignment with name currently accepted by APC (E. Wenk 2023-05-17) taxonomic_resolution: species -- find: Hydrocotyle +- find: Hydrocotyle sp. replace: Hydrocotyle sp. [Hydrocotyle; Purdie_1976] reason: Manual alignment with genus name (E. Wenk 2023-05-17) taxonomic_resolution: genus @@ -489,26 +489,14 @@ taxonomic_updates: replace: Linaria pelisseriana reason: Manual alignment with name currently accepted by APC (E. Wenk 2023-05-17) taxonomic_resolution: species -- find: Poa - replace: Poa sp. [Poa; Purdie_1976] - reason: Manual alignment with genus name (E. Wenk 2023-05-17) - taxonomic_resolution: genus - find: Poa sp. replace: Poa sp. [Purdie_1976] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Prasophyllum - replace: Prasophyllum sp. [Prasophyllum; Purdie_1976] - reason: Manual alignment with genus name (E. Wenk 2023-05-17) - taxonomic_resolution: genus - find: Prasophyllum sp. replace: Prasophyllum sp. [Purdie_1976] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Wahlenbergia - replace: Wahlenbergia sp. [Wahlenbergia; Purdie_1976] - reason: Manual alignment with genus name (E. Wenk 2023-05-17) - taxonomic_resolution: genus - find: Wahlenbergia sp. replace: Wahlenbergia sp. [Purdie_1976] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) diff --git a/data/RBGV_2022/metadata.yml b/data/RBGV_2022/metadata.yml index c5fc59cbe..a2b9169e8 100644 --- a/data/RBGV_2022/metadata.yml +++ b/data/RBGV_2022/metadata.yml @@ -222,13 +222,9 @@ taxonomic_updates: replace: Chiloglottis x pescottiana reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Coprosma x tadgellii - replace: Coprosma xtadgelii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Coprosma xtadgellii replace: Coprosma xtadgelii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) + reason: Manual alignment to APC accepted name (E. Wenk, 2023-11-19) taxonomic_resolution: species - find: Corybas xmiscellus replace: Corybas x miscellus @@ -421,10 +417,6 @@ taxonomic_updates: replace: Populus aff. yunnanensis reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: species -- find: Populus × Loch Valley (I.C.Clarke 2861) - replace: Populus x Loch Valley (I.C.Clarke 2861) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species - find: Prasophyllum aff. occidentale D replace: Prasophyllum sp. aff. occidentale D reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -461,10 +453,6 @@ taxonomic_updates: replace: Rytidosperma sp. South-west Swamps (A.C.Beauglehole 22255) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Salix x mollissima - replace: Salix x mollisima - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Salix xfragilis replace: Salix x fragilis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) diff --git a/data/RBGV_2023/metadata.yml b/data/RBGV_2023/metadata.yml index 67d63c29f..e1d11a359 100644 --- a/data/RBGV_2023/metadata.yml +++ b/data/RBGV_2023/metadata.yml @@ -508,10 +508,6 @@ taxonomic_updates: replace: Acacia x grayana reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Acacia xgrayana - replace: Acacia x grayana - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Acaena anserovina replace: Acaena x anserovina reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) @@ -520,14 +516,6 @@ taxonomic_updates: replace: Acaena x ovina reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Acaena xanserovina - replace: Acaena x anserovina - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Acaena xovina - replace: Acaena x ovina - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Anemone hybrida replace: Anemone x [Anemone hybrida] reason: Manual alignment to genus indicating hybrid taxon (E. Wenk, 2023-05-24) @@ -536,10 +524,6 @@ taxonomic_updates: replace: Anemone x [Anemone x hybrida] reason: Manual alignment to genus indicating hybrid taxon (E. Wenk, 2023-05-24) taxonomic_resolution: genus -- find: Anemone xhybrida - replace: Anemone x [Anemone xhybrida] - reason: Manual alignment to genus indicating hybrid taxon (Elizaneth Wenk, 2022-11-22) - taxonomic_resolution: genus - find: Arisarum vulgare subsp. vulgare replace: Arisarum vulgare reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -549,14 +533,6 @@ taxonomic_updates: replace: Betula sp. Mt Macedon (V.Stajsic 2545) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Brassica xjuncea - replace: Brassica x juncea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Brassica xnapus - replace: Brassica x napus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Bromus catharticus var. catharticus replace: Bromus catharticus reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -566,10 +542,6 @@ taxonomic_updates: replace: Bryophyllum x houghtonii reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Bryophyllum xhoughtonii - replace: Bryophyllum x houghtonii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Caladenia sp. aff. concolor (Violet Town) replace: Caladenia sp. Violet Town (C.Findlay & G.Backhouse s.n. 26/9/1999) reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) @@ -582,10 +554,6 @@ taxonomic_updates: replace: Caladenia x variabilis reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Caladenia xvariabilis - replace: Caladenia x variabilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Castilleja exserta subsp. exserta replace: Castilleja exserta reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -595,50 +563,22 @@ taxonomic_updates: replace: Centaurea x moncktonii reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Centaurea xmoncktonii - replace: Centaurea x moncktonii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Chiloglottis pescottiana replace: Chiloglottis x pescottiana reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Chiloglottis xpescottiana - replace: Chiloglottis x pescottiana - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Coprosma x tadgellii replace: Coprosma xtadgelii reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Coprosma xtadgellii - replace: Coprosma xtadgelii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Corybas miscellus - replace: Corybas x miscellus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Cotoneaster watereri replace: Cotoneaster x watereri reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Cotoneaster xwatereri - replace: Cotoneaster x watereri - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Crataegus sinaica replace: Crataegus x sinaica reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Crataegus xsinaica - replace: Crataegus x sinaica - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Crocosmia xcrocosmiiflora - replace: Crocosmia x crocosmiiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Cyanothamnus anemonifolius replace: Cyanothamnus anethifolius reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -724,19 +664,10 @@ taxonomic_updates: replace: Mentha x piperita reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Mentha piperita var. piperita - replace: Mentha x piperita var. piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: variety - find: Mentha rotundifolia replace: Mentha x rotundifolia reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Mentha xpiperita var. citrata - replace: Mentha x piperita var. citrata - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-22) - taxonomic_resolution: species - find: Muehlenbeckia diclina subsp. diclina replace: Muehlenbeckia diclina reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -746,18 +677,10 @@ taxonomic_updates: replace: Myosotis laxa subsp. cespitosa reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: subspecies -- find: Narcissus incomparabilis - replace: Narcissus x incomparabilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Nicotiana flindersiensis replace: Nicotiana x flindersiensis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Nymphaea marliacea - replace: Nymphaea x marliacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Onopordum nervosum subsp. castellanum replace: Onopordum nervosum var. castellanum reason: match_06. Automatic alignment with synonymous term among known canonical @@ -809,10 +732,6 @@ taxonomic_updates: replace: Populus aff. yunnanensis reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: species -- find: Populus × Loch Valley (I.C.Clarke 2861) - replace: Populus x Loch Valley (I.C.Clarke 2861) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species - find: Prasophyllum aff. occidentale D replace: Prasophyllum sp. aff. occidentale D reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -841,10 +760,6 @@ taxonomic_updates: replace: Rubus loganubaccus reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Rubus novus - replace: Rubus x novus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Rytidosperma aff. caespitosum (South-west swamps) replace: Rytidosperma sp. South-west Swamps (A.C.Beauglehole 22255) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -882,10 +797,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Sedum rubrotinctum - replace: Sedum x rubrotinctum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Senna artemisioides subsp. artemisioides replace: Senna artemisioides subsp. x artemisioides reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -910,10 +821,6 @@ taxonomic_updates: replace: Sporobolus x townsendii reason: Manual alignment to accepted name, although not in APC (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Spyridium ramosissimum - replace: Spyridium x ramosissimum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Symphytum uplandicum replace: Symphytum x uplandicum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -931,10 +838,6 @@ taxonomic_updates: replace: Verbena x brasiliensis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Viola zophodes - replace: Viola x zophodes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Phelodia tutelata replace: x Phelodia tutelata reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) diff --git a/data/Rosell_2014/metadata.yml b/data/Rosell_2014/metadata.yml index 768b179a9..c4482a6bc 100644 --- a/data/Rosell_2014/metadata.yml +++ b/data/Rosell_2014/metadata.yml @@ -376,21 +376,11 @@ substitutions: find: '1' replace: photosynthetic_bark taxonomic_updates: -- find: Cassinia aff. cunninghamii - replace: Cassinia sp. [Cassinia aff. cunninghamii; Rosell_2014] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Cassinia aff._cunninghamii replace: Cassinia sp. [Cassinia aff._cunninghamii; Rosell_2014] reason: match_09. Rewording taxon with term `affinis` preceding species epithet to indicate a genus-level alignment with `APC accepted` genus (2022-11-22) taxonomic_resolution: genus -- find: Prostanthera aff. violaceae - replace: Prostanthera sp. [Prostanthera aff. violaceae; Rosell_2014] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Prostanthera aff._violaceae replace: Prostanthera sp. [Prostanthera aff._violaceae; Rosell_2014] reason: match_09. Rewording taxon with term `affinis` preceding species epithet diff --git a/data/RussellSmith_2012/metadata.yml b/data/RussellSmith_2012/metadata.yml index c9a8dd25c..82f82db4a 100644 --- a/data/RussellSmith_2012/metadata.yml +++ b/data/RussellSmith_2012/metadata.yml @@ -775,11 +775,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2023-05-22) taxonomic_resolution: species -- find: Senna artemisioides subsp. - replace: Senna artemisioides subsp. x sturtii - reason: match_12. Manual alignment with infraspecific canonical name in APC accepted - when notes are ignored (E. Wenk, 2023-05-22) - taxonomic_resolution: subspecies - find: Senna artemisioides subsp. artemisioides replace: Senna artemisioides subsp. x artemisioides reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted diff --git a/data/SAH_2014/metadata.yml b/data/SAH_2014/metadata.yml index b2df61a62..ee0f1c8ce 100644 --- a/data/SAH_2014/metadata.yml +++ b/data/SAH_2014/metadata.yml @@ -104,11 +104,6 @@ taxonomic_updates: replace: Brachyscome ciliaris var. ciliaris reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-12) taxonomic_resolution: variety -- find: Brassica x juncea - replace: Brassica x juncea - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: species - find: Brassica juncea replace: Brassica x juncea reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -136,8 +131,5 @@ taxonomic_updates: replace: Triglochin ovoidea reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -exclude_observations: -- variable: taxon_name - find: Taraxacum sect. Erythrosperma - reason: Not including sections +exclude_observations: .na questions: .na diff --git a/data/SAH_2022/metadata.yml b/data/SAH_2022/metadata.yml index 1b1606eb8..6541e1179 100644 --- a/data/SAH_2022/metadata.yml +++ b/data/SAH_2022/metadata.yml @@ -1410,8 +1410,5 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-22) taxonomic_resolution: variety -exclude_observations: -- variable: taxon_name - find: Taraxacum sect. Erythrosperma - reason: Not including sections +exclude_observations: .na questions: .na diff --git a/data/SAH_2023/metadata.yml b/data/SAH_2023/metadata.yml index 9e7fa8b27..a96063691 100644 --- a/data/SAH_2023/metadata.yml +++ b/data/SAH_2023/metadata.yml @@ -90,7 +90,7 @@ dataset: entity_measured = ifelse(category %in% c("disc_achenes"), "disc_achenes", entity_measured), entity_measured = ifelse(category %in% c("ray_achenes"), "ray_achenes", entity_measured), entity_measured = ifelse(category %in% c("valve", "valves"), "valve", entity_measured), - entity_measured = ifelse(category %in% c("pappus"), "pappus", entity_measured), + entity_measured = ifelse(category %in% c("pappus"), "pappus", entity_measured), entity_measured = ifelse(category %in% c("capsule", "silicula", "nut", "utricles", "pyrenes", "berry", "achenes"), "fruit", entity_measured), ) %>% distinct(source, taxon_name, trait_name, trait_value, units, value_type, inferred, .keep_all = TRUE) %>% @@ -2170,11 +2170,5 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2023-05-24) taxonomic_resolution: subspecies -exclude_observations: -- variable: taxon_name - find: Riccia corrugata - reason: omit, moss -- variable: taxon_name - find: Taraxacum sect. Erythrosperma - reason: Not including sections +exclude_observations: .na questions: .na diff --git a/data/Schmidt_2003/metadata.yml b/data/Schmidt_2003/metadata.yml index 57aea79eb..0e2f5d1ef 100644 --- a/data/Schmidt_2003/metadata.yml +++ b/data/Schmidt_2003/metadata.yml @@ -41,7 +41,7 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( resprouting_capacity = ifelse(life_history == "r", "resprouts", NA), resprouting_capacity = ifelse(life_history == "o", "fire_killed", resprouting_capacity), @@ -53,7 +53,7 @@ dataset: life_history = ifelse(life_history=="f","",life_history), Nfixer = stringr::str_replace(Nfixer, "y|Y","1"), Nfixer = stringr::str_replace(Nfixer, "101","0"), - Nfixer = stringr::str_replace(Nfixer, "n|N","0"), + Nfixer = stringr::str_replace(Nfixer, "n|N","0"), plant_growth_form = ifelse(plant_growth_form %in% c("S or T", "T/S", "T or S"), "shrub tree", plant_growth_form), plant_growth_form = ifelse(plant_growth_form %in% c("S/H", "H or S", "S or H", "H/S"), "herb shrub", plant_growth_form), plant_growth_form = ifelse(species_name == "Sauropus sp.", "herb shrub", plant_growth_form), @@ -73,7 +73,7 @@ dataset: `life_history`,`phenology`, resprouting_capacity), replace_duplicates_with_NA) ) %>% ungroup() - ' + ' collection_date: 1994/1998 taxon_name: species_name location_name: site_name @@ -663,11 +663,6 @@ taxonomic_updates: reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: genus -- find: Clerodendron sp - replace: Clerodendrum sp. [Schmidt_2003] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Clerodendron sp. replace: Clerodendrum sp. [Schmidt_2003] reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level @@ -798,11 +793,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus in APNI (2022-11-10) taxonomic_resolution: genus -- find: Pachynema sp - replace: Hibbertia sp. [Schmidt_2003] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Pachynema sp. replace: Hibbertia sp. [Schmidt_2003] reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level @@ -863,11 +853,6 @@ taxonomic_updates: replace: Terminalia sericocarpa reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Thecanthes sp - replace: Pimelea sp. [Schmidt_2003] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Thecanthes sp. replace: Pimelea sp. [Schmidt_2003] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -894,8 +879,8 @@ taxonomic_updates: taxonomic_resolution: genus exclude_observations: - variable: taxon_name - find: Br. gran, Ep., Br. sp., Ep. hert, Ep. hete, Ep. sp., Ep., Gd. furc, Ha., Holly - le, Ht. sp.5, L., Ht. sp.a, Br. sp.4, Br. exse + find: Br. gran, Ep., Br. sp., Ep. hert, Ep. hete, Ep. sp., Gd. furc, Ha., holly le, + Ht. sp.5, L., Ht. sp.a, Br. sp.4, Br. exse reason: too little resolution questions: additional_traits: NRA diff --git a/data/Schulze_2014/metadata.yml b/data/Schulze_2014/metadata.yml index 48f3da36d..f6d709da5 100644 --- a/data/Schulze_2014/metadata.yml +++ b/data/Schulze_2014/metadata.yml @@ -54,12 +54,12 @@ dataset: row_number == 503 ~ "Acacia sp.. [Acacia grey mulga sp. 2; Schulze_2014]", row_number == 86 ~ "Senna sp.. [Senna sp. 1 at Road intersect, laterite site; Schulze_2014]", row_number == 251 ~ "Senna sp.. [Senna sp. 1 at Mt. Nameless, 1120m site; Schulze_2014]", - row_number == 218 ~ "Senna sp.. [Senna sp. 1 at Plateau on quartzite site; Schulze_2014]", + row_number == 218 ~ "Senna sp.. [Senna sp. 1 at Plateau on quartzite site; Schulze_2014]", row_number == 219 ~ "Senna sp.. [Senna sp. 2 at Plateau on quartzite site; Schulze_2014]", row_number == 238 ~ "Senna sp.. [Senna sp. 3 at Plateau on quartzite site; Schulze_2014]", row_number == 247 ~ "Senna sp.. [Senna sp. 3 at North of Paraburdoo site; Schulze_2014]", row_number == 41 ~ "Mimosa sp.. [Mimosa sp. 1 at Lancelin coastal heathland site; Schulze_2014]" - ), + ), species_name = ifelse(!is.na(species_name_new),species_name_new,species_name) ) %>% mutate(leaf_type = NA) %>% @@ -72,7 +72,7 @@ dataset: mutate(across(c(`physical_defence`,`leaf type`, leaf_type, `leaf_compoundness`, `Deciduous`, `Life-form`,`N2 fixing`), replace_duplicates_with_NA)) %>% ungroup() - ' + ' collection_date: Date_to_use_edited taxon_name: species_name location_name: site_name @@ -1039,26 +1039,11 @@ substitutions: find: phyllode replace: .na taxonomic_updates: -- find: Acacia 1 - replace: Acacia sp. [Acacia 1; Schulze_2014] - reason: Manual match to genus for taxon that can't be match to species (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: genus - find: Acacia 1, bubble replace: Acacia sp. [Acacia 1, bubble; Schulze_2014] reason: Manual match to genus for taxon that can't be match to species (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: genus -- find: Acacia 2 - replace: Acacia sp. [Acacia 2; Schulze_2014] - reason: Manual match to genus for taxon that can't be match to species (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: genus -- find: Acacia 3 phylloclad - replace: Acacia sp. [Acacia 3 phylloclad; Schulze_2014] - reason: Manual match to genus for taxon that can't be match to species (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: genus - find: Acacia 3, semiprickly replace: Acacia sp. [Acacia 3, semiprickly; Schulze_2014] reason: Manual match to genus for taxon that can't be match to species (Elizabeth @@ -1199,11 +1184,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Acacia grey mulga - replace: Acacia sp. [Acacia grey mulga; Schulze_2014] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Acacia in Euc replace: Acacia sp. [Acacia in Euc; Schulze_2014] reason: Manual match to genus for taxon that can't be match to species (Elizabeth @@ -1269,11 +1249,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Acacia minniritchi bark - replace: Acacia rhodophloia [Acacia minniritchi bark; Schulze_2014] - reason: Manual match to genus for taxon that can't be match to species (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: genus - find: Acacia minniritchi bark shrub replace: Acacia minniritchi reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -1485,10 +1460,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Acacia oblong - replace: Acacia oblonga - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Acacia prunocarpa replace: Acacia pruinocarpa reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1508,31 +1479,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Acacia sp. - replace: Acacia sp. [Schulze_2014] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus -- find: Acacia sp. [Acacia linear 1; Schulze_2014] - replace: Acacia sp. [Acacia linear 1; Schulze_2014] - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus -- find: Acacia sp. [Acacia linear 2; Schulze_2014] - replace: Acacia sp. [Acacia linear 2; Schulze_2014] - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus -- find: Acacia sp. [Acacia linear; Schulze_2014] - replace: Acacia sp. [Acacia linear; Schulze_2014] - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus -- find: Acacia sp. [Acacia waxy; Schulze_2014] - replace: Acacia sp. [Acacia waxy; Schulze_2014] - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus - find: Acacia sp.. [Acacia dwarf shrub sp. 1; Schulze_2014] replace: Acacia sp. [Acacia dwarf shrub sp. 1; Schulze_2014] reason: Align to genus & add taxonomic_resolution (E. Wenk, 2023-11-01) @@ -1723,21 +1669,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-22) taxonomic_resolution: genus -- find: Senna 1 - replace: Senna sp. [Senna 1; Schulze_2014] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus -- find: Senna 2 - replace: Senna sp. [Senna 2; Schulze_2014] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus -- find: Senna 3 - replace: Senna sp. [Senna 3; Schulze_2014] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Senna big leaf replace: Senna sp. [Senna big leaf; Schulze_2014] reason: match_20. Rewording name to be recognised as genus rank, with genus accepted @@ -1753,10 +1684,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: subspecies -- find: Senna sp.. [Senna sp. 1 at Mt. Nameless, 1120m site; Schulze_2014] - replace: Senna sp. [Senna sp. 1 at Mt. Nameless, 1120m site; Schulze_2014] - reason: Align to genus & add taxonomic_resolution (E. Wenk, 2023-11-01) - taxonomic_resolution: genus - find: Senna sp.. [Senna sp. 1 at Mt. Nameless, 1120m site; Schulze_2014] replace: Senna sp. [Senna sp. 1 at Mt. Nameless, 1120m site; Schulze_2014] reason: Align to genus & add taxonomic_resolution (E. Wenk, 2023-11-01) diff --git a/data/Simpson_2021/metadata.yml b/data/Simpson_2021/metadata.yml index 3ff44cffb..afc22bd42 100644 --- a/data/Simpson_2021/metadata.yml +++ b/data/Simpson_2021/metadata.yml @@ -377,14 +377,6 @@ taxonomic_updates: replace: Microlaena stipoides reason: Manual change to align to correct APC name. (E. Wenk 2023-05-04) taxonomic_resolution: species -- find: Ehrharta stipoides - replace: Microlaena stipoides - reason: Manual change to align to correct APC name. (E. Wenk 2023-05-04) - taxonomic_resolution: species -- find: Eriachne armiti - replace: Eriachne armitii - reason: Manual change to align to correct APC name. (E. Wenk 2023-05-04) - taxonomic_resolution: species - find: Eulalia contorta replace: Pseudopogonatherum contortum reason: Manual change to align to correct APC name. (E. Wenk 2023-05-04) diff --git a/data/Sjostrom_2006/metadata.yml b/data/Sjostrom_2006/metadata.yml index dc0c3a0ae..cbcb5b940 100644 --- a/data/Sjostrom_2006/metadata.yml +++ b/data/Sjostrom_2006/metadata.yml @@ -26,7 +26,7 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: no - custom_R_code: ' + custom_R_code: ' data %>% mutate( clonal_spread_mechanism = NA, @@ -460,182 +460,32 @@ taxonomic_updates: replace: Acacia sp. Castletower (N.Gibson TOI345) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Acacia sp. Dandaragan (S. van Leeuwen 269) - replace: Acacia sp. Dandaragan (S.van Leeuwen 269) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Acacia sp. Ronlow Park (E.J.Thompson+61) replace: Acacia sp. Ronlow Park (E.J.Thompson+ 61) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Acacia spirorbis ssp. solandri - replace: Acacia spirorbis subsp. solandri - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Acacia terminalis subsp. terminalis - replace: Acacia terminalis - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Acacia terminalis subsp. terminalis MS replace: Acacia terminalis reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Acmena hemilampra ssp. hemilampra - replace: Acmena hemilampra subsp. hemilampra - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Acmena hemilampra ssp. orophila - replace: Acmena hemilampra subsp. orophila - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Acmena sp. (Cooper Creek G S 1419) - replace: Acmena sp. (Cooper Creek GS 1419) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Acronychia sp. (Batavia Downs J R C 8511) - replace: Acronychia sp. (Batavia Downs JRC 8511) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Adenanthos cunninghamii - replace: Adenanthos x cunninghamii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-12) - taxonomic_resolution: species -- find: Agapetes sp - replace: Agapetes sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Aidia sp. (Gap Creek L W J 651) - replace: Aidia sp. (Gap Creek L.W.Jessup 651) - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-10) - taxonomic_resolution: species - find: Aidia sp. (Gap Creek LWJ 651) replace: Aidia sp. (Gap Creek L.W.Jessup 651) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Ailanthus integrifolia ssp. integrifolia - replace: Ailanthus integrifolia subsp. integrifolia - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Alangium sp. (Claudie River B H 2682 RFK) - replace: Alangium sp. (Claudie River BH 2682RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Alangium villosum ssp. polyosmoides - replace: Alangium villosum subsp. polyosmoides - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Alangium villosum ssp. tomentosum - replace: Alangium villosum subsp. tomentosum - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Albizia sp. (Sir Charles Hardy Is BH 25849 RFK) - replace: Albizia sp. (Sir Charles Hardy Is BH 25849RFK) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Albizia sp. (Windsor Tableland B G 2181) - replace: Albizia sp. Windsor Tableland (B.Gray 2181) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Alectryon coriaceous - replace: Alectryon coriaceus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Allocasuarina sp. Shaw Island (G.N.Batianoff et al. 3360) replace: Allocasuarina sp. Shaw Island (G.N.Batianoff+ 3360) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Alphitonia sp. (Forty Mile Scrub BH 25763 RFK) - replace: Alphitonia sp. (Forty Mile Scrub BH 25763RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Alphitonia sp. (Kimberley BH 25117 RFK) - replace: Alphitonia sp. (Kimberley BH 25117RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Alstonia spectabilis ssp. ophioxyloides - replace: Alstonia spectabilis subsp. ophioxyloides - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Alstonia spectabilis ssp. spectabilis - replace: Alstonia spectabilis subsp. spectabilis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies - find: Alyogyne sp. Hyden (G.S.Durrell GD127) replace: Alyogyne sp. Hyden (G.S.Durell GD127) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Amperea xiphoclada var. pedicillata - replace: Amperea xiphoclada var. pedicellata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: variety -- find: Ancana sp - replace: Meiogyne sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Aneilema sp. Tower LA (P.I.Forster +PIF14846) replace: Aneilema sp. Tower LA (P.I.Forster+ PIF14846) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Angasomyrtus sp - replace: Kunzea sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Antirhea putaminosa (F. Muell.) F. M. Bailey - replace: Antirhea putaminosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Antirhea sp. (Mt Lewis B G 5733) - replace: Antirhea sp. Mt Misery (L.W.Jessup+ GJD3136) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Aponogeton bullusus - replace: Aponogeton bullosus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Aponogeton hexapetalus - replace: Aponogeton hexatepalus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Argentipallium spiceri - replace: Argentipallium x spiceri - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-12) - taxonomic_resolution: species -- find: Argyrodendron actinophyllum ssp. diversifolium - replace: Argyrodendron actinophyllum subsp. diversifolium - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Argyrodendron sp. (Boonjee BH 2139 RFK) - replace: Argyrodendron sp. (Boonjee BH 2139RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Argyrodendron sp. (Penta Tulip Oak BH 2565 RFK) - replace: Argyrodendron sp. (Penta Tulip Oak BH 2565RFK) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Argyrodendron sp. (Whyanbeel BH 1106 RFK) - replace: Argyrodendron sp. (Whyanbeel BH 1106RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Argyrodendron sp. Kin Kin (W.D.Francis AQ 81198) replace: Argyrodendron sp. Kin Kin (W.D.Francis AQ81198) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -648,85 +498,6 @@ taxonomic_updates: replace: Argyrodendron sp. Whyanbeel (B.P.Hyland RFK1106) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Artabotrys sp. Claudie River - replace: Artabotrys sp. (Claudie River B.Gray 3240) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Astartia sp - replace: Astartea sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Atractocarpus fitzalanii ssp. fitzalanii - replace: Atractocarpus fitzalanii subsp. fitzalanii - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Atractocarpus fitzalanii ssp. tenuipes - replace: Atractocarpus fitzalanii subsp. tenuipes - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Austrobuxus. sp - replace: Austrobuxus sp. [Sjostrom_2006] - reason: match_01_fuzzy. Fuzzy match of name ending with `sp.` to an APC accepted - genus (2022-11-10) - taxonomic_resolution: genus -- find: Austrofestuca sp - replace: Poa sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Austromyrtus sp. (Annan River B H 25539 RFK) - replace: Austromyrtus sp. (Annan River BH 25539RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Bamaga B H 10235) - replace: Austromyrtus sp. (Bamaga BH 10235) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Byerstown Range G P G 2037) - replace: Austromyrtus sp. (Byerstown Range GPG 2037) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Cape Flattery L J W 13537) - replace: Austromyrtus sp. (Cape Flattery LJW 13537) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Danbulla L S S 10123) - replace: Austromyrtus sp. (Danbulla LSS 10123) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Forty Mile Scrub G C S 1785) - replace: Austromyrtus sp. (Forty Mile Scrub GCS 1785) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Gillies B G 1484) - replace: Austromyrtus sp. (Gillies BG 1484) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Leo Creek B G 5244) - replace: Austromyrtus sp. (Leo Creek BG 5244) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Mc Ilwraith Range B H 11148) - replace: Austromyrtus sp. (McIlwraith Range BH 11148) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Mt Lewis B G 831) - replace: Austromyrtus sp. (Mt Lewis BG 831) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Austromyrtus sp. (Windsor Tableland B G 412) - replace: Austromyrtus sp. (Windsor Tableland BG 412) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Bacularia sp - replace: Linospadix sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Baeckea sp. Esperance (A.R.Gunness AG2435) replace: Baeckea sp. Esperance (A.G.Gunness AG 2435) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -765,413 +536,57 @@ taxonomic_updates: replace: Baeckea sp. Yorkrakine (C.A.Gardner s.n. 09/1933) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Baloskion tenuicele - replace: Baloskion tenuiculme - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Barringtonia acutangula ssp. acutangula - replace: Barringtonia acutangula subsp. acutangula - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Bertya sp. Beeron Holding (P. I. Forster 5753) - replace: Bertya sp. (Beeron Holding P.I.Forster PIF5753) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Billardiera fraserii - replace: Billardiera fraseri - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Billardiera macranthra - replace: Billardiera macrantha - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Boea kinneari - replace: Boea kinnearii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Borreria sp - replace: Spermacoce sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Brachiaria sp - replace: Urochloa sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Brachychiton Wangi (S.E.Pickering 20) replace: Brachychiton sp. Wangi (S.E.Pickering 20) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Brachychiton diversifolius ssp. diversifolius - replace: Brachychiton diversifolius subsp. diversifolius - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Brachyglottis sp - replace: Brachyglottis sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Brackenridgea nitida ssp. australiana - replace: Brackenridgea nitida subsp. australiana - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Bracteantha sp - replace: Xerochrysum sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Breynia sp. (Black Mountain B H 25658 RFK) - replace: Breynia sp. (Black Mountain BH 25658RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Brunonia sp. Goldfields (K.F.Kenneally 5452) replace: Brunonia australis var. A Kimberley Flora (K.F.Kenneally 5452) reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Bubbia queenslandiana ssp. australis - replace: Bubbia queenslandiana subsp. australis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Bubbia queenslandiana ssp. queenslandiana - replace: Bubbia queenslandiana subsp. queenslandiana - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Burmannia sp. Melville Island (R. Fensham 1021) - replace: Burmannia sp. Melville Island (R.Fensham 1021) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Caelospermum sp - replace: Coelospermum sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Caladenia sp. aff. venusta - replace: Caladenia sp. [Caladenia sp. aff. venusta; Sjostrom_2006] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus -- find: Caldcluvia. sp - replace: Caldcluvia sp. [Sjostrom_2006] - reason: match_01_fuzzy. Fuzzy match of name ending with `sp.` to an APC known genus - (2022-11-10) - taxonomic_resolution: genus - find: Callistemon sp. Rainbow Falls (P.I.Forster PIF 13786) replace: Callistemon sp. (Rainbow Falls P.I.Forster PIF13786) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Calophanoides sp - replace: Harnieria sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Caltha sp - replace: Caltha sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Canthium sp - replace: Canthium sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Canthium sp. - replace: Canthium sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Canthium sp. (Friday Island L J B 18158) - replace: Canthium sp. (Friday Island LJB 18158) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Canthium sp. (Herberton Range S F K 1377) - replace: Canthium sp. (Herberton Range SFK 1377) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Canthium sp. (Kimberley B H 25133 RFK) - replace: Canthium sp. (Kimberley BH 25133RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Canthium sp. (Whitfield Range B H 1020 RFK) - replace: Canthium sp. (Whitfield Range) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Canthium. sp - replace: Canthium sp. [Sjostrom_2006] - reason: Manual match to genus for taxon that can't be match to species (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: genus -- find: Capparis sp. (Forty Mile Scrub BH 3883 RFK) - replace: Capparis sp. (Forty Mile Scrub BH 3883RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Capparis sp. Iron Range - replace: Capparis sp. (Iron Range) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Casearia sp. (Mission Beach B H 773 RFK) - replace: Casearia sp. (Mission Beach B.P.Hyland 773) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Casearia sp. (Mission Beach BH 773RFK) replace: Casearia sp. (Mission Beach B.P.Hyland 773) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Cathormion umbellatum ssp. moniliforme - replace: Cathormion umbellatum subsp. moniliforme - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Centuarium sp - replace: Centaurium sp. [Sjostrom_2006] - reason: match_01_fuzzy. Fuzzy match of name ending with `sp.` to an APC accepted - genus (2022-11-10) - taxonomic_resolution: genus -- find: Ceratanthus sp - replace: Ceratanthus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Ceratopetalum sp. (Mt Hemmant B H 3338 RFK) - replace: Ceratopetalum sp. (Mt Hemmant BH 3338RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Ceratopetalum sp. (Mt Spurgeon B H 1501 RFK) - replace: Ceratopetalum sp. Mt Spurgeon (B.Hyland RFK1501) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Chamelaucium sp. Gingin (N. G. Marchant s.n. 4/11/1988) - replace: Chamelaucium sp. Gingin (N.G.Marchant s.n. 4/11/1988) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cheiranthera sp (boralis, Granite Belt) - replace: Cheiranthera borealis - reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name - in `APC accepted` when everything except first 2 words ignored (2022-11-10) - taxonomic_resolution: species -- find: Cheiranthera sp. (New England, Ian Telford) - replace: Cheiranthera telfordii - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species -- find: Chionogentias sp - replace: Gentianella sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Chionohebe sp - replace: Veronica sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Choricarpia sp - replace: Backhousia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Chrysogonum sp - replace: Chrysogonum sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Chrysophyllum sp. Mt Lewis - replace: Chrysophyllum sp. (Mt Lewis) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species - find: Citrus microcarpa replace: Citrus x microcarpa reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Cliffordiochloa parvispicula - replace: Cliffordiochloa parvispiculata - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cochlospermum gillivraei ssp. gillivraei - replace: Cochlospermum gillivraei subsp. gillivraei - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Codiaeum variagatum - replace: Codiaeum variegatum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Coleus sp - replace: Plectranthus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Commelina sp. Lakefield NP (P.I.Forster 12943) replace: Commelina sp. Lakefield NP (P.I.Forster+ PIF12943) reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Commersonia sp. (Klondike B H 25863 RFK) - replace: Commersonia sp. (Klondike BH 25863RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Corybas sp. Finniss (R. Bates 28794) - replace: Corybas sp. Finniss (R.Bates 28794) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Craspedia sp. Yalgorup (G.J.Keighery 14449) replace: Craspedia sp. Yalgorup National Park (G.J.Keighery 14449) reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Croton sp. (Barkley Downs S. L. Everist 3379) - replace: Croton sp. (Barkly Downs S.L.Everist 3379) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Croton sp. (Mt Mulligan H. Flecker NQN C6457) - replace: Croton sp. (Mt Mulligan H.Flecker NQNC6457) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Croton sp. (Myall Creek P. I. Forster F14368) - replace: Croton sp. (Myall Creek P.I.Forster PIF14368) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Croton sp. (Possum Scrub PIF 14376) replace: Croton sp. (Possum Scrub P.I.Forster PIF14376) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Croton sp. (Watson River J. R. Clarkson 4061B) - replace: Croton sp. (Watson River J.R.Clarkson 4061B) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Croton sp. Possum scrub - replace: Croton sp. (Possum Scrub P.I.Forster PIF14376) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Croton stockerii - replace: Croton stockeri - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Crudia sp. (Archer River BH 3078 RFK) - replace: Crudia sp. (Archer River BH 3078RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Crypsis sp - replace: Sporobolus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Cryptocarya endiaridrifolia - replace: Cryptocarya endiandrifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cryptocarya hypospadia - replace: Cryptocarya hypospodia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cryptocarya sp. (Boonjee B H 25794 RFK) - replace: Cryptocarya sp. (Boonjee BH 25794RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cryptocarya sp. (Gadgarra B H 25231 RFK) - replace: Cryptocarya sp. (Gadgarra BH 25231RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cryptolepis sp - replace: Cryptolepis sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Cyathostemma sp A - replace: Cyathostemma sp. A - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Cyperus bowmannii - replace: Cyperus bowmanni - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Daphnandra sp. Illawarra (R. Schodde 3475) - replace: Daphnandra sp. Illawarra (R.Schodde 3475) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Darwinia sp. Carnamah (J. Coleby- Williams 148) - replace: Darwinia sp. Carnamah (J.Coleby-Williams 148) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Darwinia sp. Williamson (G. J. Keighery 12717) - replace: Darwinia sp. Williamson (G.J.Keighery 12717) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Daviesia euryloba replace: Daviesia eurylobos reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Decaspermum sp. Mt Morgan (D. Hoy 71) - replace: Decaspermum sp. Mt Morgan (D.Hoy 71) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Denhamia pittosporoides ssp. angustifolia - replace: Denhamia pittosporoides subsp. angustifolia - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Denhamia pittosporoides ssp. pittosporoides - replace: Denhamia pittosporoides subsp. pittosporoides - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Derwentia sp - replace: Veronica sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Desmos sp. Mossman River - replace: Desmos sp. (Mossman River) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Desmos. sp - replace: Desmos sp. [Sjostrom_2006] - reason: match_01_fuzzy. Fuzzy match of name ending with `sp.` to an APC accepted - genus (2022-11-10) - taxonomic_resolution: genus -- find: Dicerma sp - replace: Aphyllodium sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Dicrastylis sp. Ilkurlka (R.Davis et al. 11637) replace: Dicrastylis sp. Ilkurlka (R.Davis et al. RD 11637) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Diospyros sp. (Baird L A B H 9374) - replace: Diospyros sp. (Baird LA BH 9374) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Diospyros sp. (Mt Lewis L S S 10107) - replace: Diospyros sp. (Mt Lewis L.S.Smith 10107) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Diospyros sp. (Mt Lewis LSS 10107) replace: Diospyros sp. (Mt Lewis L.S.Smith 10107) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Diospyros sp. (Mt Spurgeon C T W 10677) - replace: Diospyros sp. (Mt Spurgeon CTW 10677) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Diospyros sp. (Mt White P I F 14415) - replace: Diospyros sp. (Mt White P.I.Forster PIF14415) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Diospyros sp. (Mt White PIF 14415) replace: Diospyros sp. (Mt White P.I.Forster PIF14415) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -1182,21 +597,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Diospyros sp. (Swipers LABH 1984 RFK) - replace: Diospyros sp. (Swipers LA B.Hyland 1984RFK) - reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name - in APC known when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Diplospora sp - replace: Diplospora sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Distichostemon sp - replace: Dodonaea sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Diuris polymorpha replace: Diuris x polymorpha reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -1210,232 +610,41 @@ taxonomic_updates: replace: Drummondita rubriviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Dryadodaphne sp. (Mt Lewis BH 1496 RFK) - replace: Dryadodaphne sp. 'Mt Lewis' (B.P.Hyland+ RFK1496) +- find: Elaeocarpus sp. (Mossman Bluff DF 1666) + replace: Elaeocarpus sp. (Mossman Bluff D.G.Fell DF1666) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Dryandra sp - replace: Banksia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Dysophylla sp - replace: Pogostemon sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Dysoxylum mollissimum ssp. molle - replace: Dysoxylum mollissimum subsp. molle - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Dysoxylum sp. (Gosschalk L A B G 786) - replace: Dysoxylum sp. (Gosschalk LA BG 786) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Ebermaiera sp - replace: Staurogyne sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Eichlerago sp - replace: Prostanthera sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Elaeocarpus largiflorens ssp. largiflorens - replace: Elaeocarpus largiflorens subsp. largiflorens - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Elaeocarpus largiflorens ssp. retinervis - replace: Elaeocarpus largiflorens subsp. retinervis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Elaeocarpus sp. (Mossman Bluff DF 1666) - replace: Elaeocarpus sp. (Mossman Bluff D.G.Fell DF1666) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Elaeocarpus sp. (Mossman Bluff DF1666) - replace: Elaeocarpus sp. (Mossman Bluff D.G.Fell DF1666) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Elaeocarpus sp. (Mt Spurgeon BH 2907 RFK) - replace: Elaeocarpus sp. (Mt Spurgeon BH 2907RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Elaeocarpus sp. Mt Misery (L.J.Webb+ 10905) - replace: Elaeocarpus sp. (Mt Misery L.J.Webb+ 10905) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Elaeocarpus sp. Rocky Creek (G. Read AQ 562114) - replace: Elaeocarpus sp. Rocky Creek (G.Read AQ 562114) +- find: Elaeocarpus sp. Mt Misery (L.J.Webb+ 10905) + replace: Elaeocarpus sp. (Mt Misery L.J.Webb+ 10905) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species - find: Elaeocarpus sp. Windsor Tableland (L.W.Jessup & GJM 1378) replace: Elaeocarpus sp. Windsor Tableland (L.W.Jessup+ GJM1378) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Elyonurus sp - replace: Elionurus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Empodisma gracillum - replace: Empodisma gracillimum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Endiandra monothyra ssp. monothyra - replace: Endiandra monothyra subsp. monothyra - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Endiandra monothyra ssp. trichophylla - replace: Endiandra monothyra subsp. trichophylla - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Epacris sp. aff. virgata 'graniticola' - replace: Epacris aff. virgata 'graniticola' - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: species -- find: Epacris virgata Beaconsfield' - replace: Epacris virgata (Beaconsfield) - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: species -- find: Epiblema grandiflorum var. cyanea K. Dixon ms. - replace: Epiblema grandiflorum var. cyanea - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: variety -- find: Eremocitrus sp - replace: Citrus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Eremophila denticulata subsp. trisulcata Chinnock ms. - replace: Eremophila denticulata subsp. trisulcata - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: subspecies -- find: Eriosema chinensis - replace: Eriosema chinense - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Erodium sp. Blesing (F.R.Wheeler 471) replace: Erodium sp. Blesing (J.R.Wheeler 471) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Erythrina sp. (Croftby P. I. Forster+ PI F6209) - replace: Erythrina sp. (Croftby P.I.Forster+ PIF6209) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Erythroxylum sp. (Cape York E C 20162) - replace: Erythroxylum sp. (Cape York EC 20162) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Eucalyptus balanites - replace: Eucalyptus x balanites - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species -- find: Eucalyptus bennettiae - replace: Eucalyptus x bennettiae - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-12) - taxonomic_resolution: species -- find: Eucalyptus phylacis - replace: Eucalyptus x phylacis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-12) - taxonomic_resolution: species -- find: Eucalyptus rhodantha var. petiolaris - replace: Eucalyptus rhodantha var. x petiolaris - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: variety - find: Eucalyptus sp. Consuelo Tableland (M.I.H.Brooker B4884) replace: Eucalyptus sp. Consuelo Tableland (M.I.Brooker B4884) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus sp. Howes Swamp Creek (M. Doherty 19/7/1985 NSW 207054) - replace: Eucalyptus sp. Howes Swamp Creek (M.Doherty, 19/7/1985 NSW 207054) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus x nepeanensis replace: Eucalyptus x [Eucalyptus x nepeanensis; Sjostrom_2006] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Euchiton sp. Indooroopilly - replace: Euchiton sp. (Indooroopilly L.Pedley 4421) - reason: match_19. Automatic alignment with species-level canonical name in APNI - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Euchiton subfalcatum - replace: Gnaphalium subfalcatum - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species -- find: Euphorbia sp. A NSW - replace: Euphorbia sp. A - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Euphorbia sp. B Kimberley Flora (B. J. Carter 629) - replace: Euphorbia sp. B Kimberley Flora (B.J.Carter 629) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Euphrasia sp. 'fabula' - replace: Euphrasia sp. fabula - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Eurybiopsis sp - replace: Minuria sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Evodiella sp - replace: Melicope sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Ficus opposita var. micrantha - replace: Ficus opposita var. micracantha - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: variety - find: Flacourtia sp. (Shiptons Flat LWJ + GJD 3200) replace: Flacourtia sp. Shiptons Flat (L.W.Jessup+ GJD3200) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Flacourtia sp. Shiptons Flat LWJ + GJD 3200) - replace: Flacourtia sp. Shiptons Flat (L.W.Jessup+ GJD3200) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Garcinia sp. (Claudie River L J B 19658) - replace: Garcinia sp. Claudie River (L.J.Brass 19658) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-10) - taxonomic_resolution: species -- find: Gastonia sp - replace: Polyscias sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Geleznowia sp. Binnu (K.A.Shepherd & J. Wege KS 1301) replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Glycine aphyonata - replace: Glycine aphyonotos - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Glycine aphyonota replace: Glycine aphyonotos reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) @@ -1444,11 +653,6 @@ taxonomic_updates: replace: Glycine lactivirens reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Gnaphalium sp. Hughenden - replace: Gnaphalium sp. (Hughenden C.E.Hubbard+ 7639) - reason: match_19. Automatic alignment with species-level canonical name in APNI - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Gompholobium gairdnerium replace: Gompholobium gairdnerianum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1466,24 +670,10 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Grewia australus - replace: Grewia australis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Gronophyllum sp - replace: Hydriastele sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Guichenotia basivirida replace: Guichenotia basiviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Gulubia sp - replace: Hydriastele sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Hakea cygna replace: Hakea cygnus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) @@ -1492,995 +682,131 @@ taxonomic_updates: replace: Hakea sp. Hay River (Raudino 14) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Halosarcia sp - replace: Tecticornia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Haplostichanthus sp. (Johnstone River L W J 471) - replace: Haplostichanthus sp. (Johnstone River LWJ 471) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Haplostichanthus sp. Rocky River - replace: Haplostichanthus sp. (Rocky River Scrub P.I.Forster+ PIF10617) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Haplostichanthus topaz - replace: Haplostichanthus sp. (Topaz LWJ 520) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Haplostichanthus. sp - replace: Haplostichanthus sp. [Sjostrom_2006] - reason: match_01_fuzzy. Fuzzy match of name ending with `sp.` to an APC accepted - genus (2022-11-10) - taxonomic_resolution: genus -- find: Hedraianthera sp. (Mossman V K M 2557) - replace: Hedraianthera sp. (Mossman V.K.Moriarty 2557) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Hedraianthera sp. (Mossman VKM 2557) - replace: Hedraianthera sp. (Mossman V.K.Moriarty 2557) - reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name - in APC known when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Hemiandra sp. Watheroo (S. Hancocks 4) - replace: Hemiandra sp. Watheroo (S.Hancocks 4) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Hemigenia clotteniana Bailey - replace: Hemigenia clotteniana - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Hemigenia dulca - replace: Hemigenia dulcis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: species -- find: Hemigenia sp. Crooked Creek (E.J.Thompson+ CHA 228) - replace: Hemigenia sp. Crooked Creek (E.J.Thompson+ CHA228) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Hemigenia sp. Three Springs (S.Patrick 4043A) - replace: Hemigenia sp. Three Springs (S.Patrick 4043 A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Hernandia alibiflora - replace: Hernandia albiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Hibiscus geranoides - replace: Hibiscus geranioides - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Hollandaea sp. (Pinnacle Rock Track P I F 10714) - replace: Hollandaea sp. (Pinnacle Rock Track PIF 10714) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Hydatella sp - replace: Trithuria sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Hymenanthera sp - replace: Melicytus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Hymenochaeta sp - replace: Hymenochaeta sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Hypocalymma linifolium - replace: Hypocalimna linifolium - reason: Fuzzy match of taxon name to an APC-known canonical name once punctuation - and filler words are removed (2023-11-02) - taxonomic_resolution: species -- find: Hypocalymma sp. Cascade (R.Bruhn 20896) - replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) - reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Hypsela sp - replace: Isotoma sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Ilex arnhemensis ssp. arnhemensis - replace: Ilex arnhemensis subsp. arnhemensis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Ilex arnhemensis ssp. ferdinandi - replace: Ilex arnhemensis subsp. ferdinandi - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Ilex sp. (Gadgarra BH 2011 RFK) - replace: Ilex sp. (Gadgarra BH 2011RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Ilysanthes sp - replace: Lindernia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Indigofera mackinlayi - replace: Indigofera mckinlayi - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Indigofera obovata - replace: Indigofera obovata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. (A83977 Areyonga) - replace: Indigofera A83977 Areyonga - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-12) - taxonomic_resolution: species -- find: Indigofera sp. (A86365 Mac Donnell Ranges) - replace: Indigofera A86365 Macdonnell Ranges - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. (Aramac E. J. Thompson+ J E R177) - replace: Indigofera sp. (Aramac E.J.Thompson+ JER177) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. (D146784 Marrawal) - replace: Indigofera sp. Marrawal (C.R.Michell 2906) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species -- find: Indigofera sp. (St Anns Homestead E. J. Thompson+ BU C500) - replace: Indigofera sp. (St Anns Homestead E.J.Thompson+ BUC500) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. (Walsh River J. R. Clarkson 3020) - replace: Indigofera sp. (Walsh River J.R.Clarkson 3020) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. (Yuendumu N. M. Henry 333) - replace: Indigofera sp. (Yuendumu N.M.Henry 333) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. A Kimberley Flora (G. J. Keighery & N. Gibson 70) - replace: Indigofera sp. A Kimberley Flora (G.J.Keighery & N.Gibson 70) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Indigofera sp. Warburton (A. A. Munir 5209) - replace: Indigofera sp. Warburton (A.A.Munir 5209) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Ixora sp. (North Mary LABH 8618) - replace: Ixora sp. (North Mary LA B.H. 8618) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Jacksonia sp. Collie (C. J. Koch 177) - replace: Jacksonia sp. Collie (C.J.Koch 177) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Jagera javanica ssp. australiana - replace: Jagera javanica subsp. australiana - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Jagera pseudorhus var. pseudorhus forma pilosiuscula - replace: Jagera pseudorhus f. pilosiuscula - reason: Manual alignment with canonical name with rank forma` in APC (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: form -- find: Kailarsenia sp - replace: Kailarsenia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Keraudrenia sp - replace: Seringia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Kibara sp - replace: Kibara sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Lagenophora sp. Forty mile scrub - replace: Lagenophora sp. (Forty Mile Scrub R.J.Fensham 1113) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Lasiopetalum sp. Badgingarra (E.A.Griffiths 5278) - replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E.Reid 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Lavatera sp - replace: Lavatera sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus -- find: Lepilaena sp - replace: Althenia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Leptopus sp - replace: Notoleptopus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Leptosema cervicorne - replace: Leptosema cervicornu - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: species -- find: Leucopogon malayanus ssp. novoguineensis - replace: Leucopogon malayanus subsp. novoguineensis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Leucopogon sp. Bolgart (M.Hislop & F.Hort MH2486) - replace: Leucopogon sp. Bolgart (M.Hislop & F.Hort MH 2486) - reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation - and filler words are removed (2023-11-02) - taxonomic_resolution: species -- find: Leucopogon sp. Coolmunda (D. Halford Q 1635) - replace: Leucopogon sp. Coolmunda (D.Halford Q1635) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Leucopogon sp. Corrigin (K.Kershaw KK2091) - replace: Leucopogon sp. Corrigin (K.Kershaw KK 2091) - reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Leucopogon sp. Great Southern (R.S.Cowan A586) - replace: Leucopogon sp. Great Southern (R.S.Cowan A-586) - reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation - and filler words are removed (2023-11-02) - taxonomic_resolution: species -- find: Leucopogon sp. Lamington (G.Leiper AQ 633386) - replace: Leucopogon sp. Lamington (G.Leiper AQ633386) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Leucopogon sp. Southern Granite (E.D.Middleton EDM266) - replace: Leucopogon sp. Southern Granite (E.D.Middleton EDM 266) - reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Lindera queenslandica B. Hyland - replace: Lindera queenslandica - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Linociera sp. (Little Pine LABH 2520 RFK) - replace: Linociera sp. (Little Pine LA BH 2520RFK) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Longetia sp - replace: Austrobuxus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Lophostemon grandiflorus ssp. riparius - replace: Lophostemon grandiflorus subsp. riparius - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Lysiphyllum sp - replace: Bauhinia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Macrostelia grandifolia ssp. Macilwraithensis - replace: Macrostelia grandifolia subsp. macilwraithensis - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Macrostelia grandifolia ssp. grandifolia - replace: Macrostelia grandifolia subsp. grandifolia - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Macrostelia sp. Bolthead B G6853 - replace: Macrostelia sp. (Bolt Head BG 6853) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Maidenia sp - replace: Trachymene sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Malaisia sp - replace: Malaisia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus -- find: Mallophora sp - replace: Dicrastylis sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Mallotus megadon - replace: Mallotus megadontus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Marianthus (Dryandra, (D. M. Rose 397)) - replace: Marianthus dryandra - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Marianthus bignoniacea - replace: Marianthus bignoniaceus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Marianthus coeruleo-punctatus - replace: Marianthus coeruleopunctatus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Marianthus granulata - replace: Marianthus granulatus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Marianthus sp (sylvaticus, Walpole) - replace: Marianthus sylvaticus - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Maytenus sp. (Windsor Tableland B H 3416 RFK) - replace: Maytenus sp. (Windsor Tableland BH 3416RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Maytenus sp. Mt Coolon (D.Corr PA 409) - replace: Maytenus sp. Mt Coolon (D.Corr PA409) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Medicosma sp. (Pieter Botte B H 3503 RFK) - replace: Medicosma sp. (Pieter Botte BH 3503RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Meiogyne sp. Henrietta Creek - replace: Meiogyne sp. (Henrietta Creek) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melaleuca borialis - replace: Melaleuca borealis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melichrus hirsutus MS - replace: Melichrus hirsutus - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Melichrus sp. Gibberagee (A. S. Benwelll & J. B. Williams 97239) - replace: Melichrus sp. Gibberagee (A.S.Benwell & J.B.Williams 97239) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melicope sp. (Shipton flats) - replace: Melicope sp. (Shiptons Flat) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Melicytus novae-zelandiae centurionis - replace: Melicytus novae-zelandiae subsp. centurionis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Melicytus ramiflorus oblongifolius - replace: Melicytus ramiflorus subsp. oblongifolius - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Melodorum leichardtii - replace: Melodorum leichhardtii - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melodorum sp. Claudia River - replace: Melodorum sp. (Claudie River) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melodorum sp. Font Hills - replace: Melodorum sp. (Font Hills) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melodorum sp. Stone Crossing - replace: Melodorum sp. (Stone Crossing) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Melodorum sp. topaz - replace: Melodorum sp. (Topaz) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Mesua lamachiana - replace: Mesua larnachiana - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Meziella sp - replace: Myriophyllum sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Microcitrus sp - replace: Citrus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Mirbelia sp. Bursarioides (T..Lally 760) - replace: Mirbelia sp. Bursarioides (T.R.Lally 760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Mischocarpus pyriformis ssp. pyriformis - replace: Mischocarpus pyriformis subsp. pyriformis - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Mischocarpus pyriformis ssp. retusus - replace: Mischocarpus pyriformis subsp. retusus - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Mitrephora zippelliana - replace: Mitrephora zippeliana - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Monimiaceae Gen. Nov. sp. (Mc Dowell Range JGT 14552) - replace: Wilkiea sp. McDowall Range (J.G.Tracey 14552) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) - taxonomic_resolution: species -- find: Monimiaceae sp. (Mc Ilwraith Range B H 10894) - replace: Monimiaceae sp. [Monimiaceae sp. (Mc Ilwraith Range B H 10894); Sjostrom_2006] - reason: match_21. Rewording name to be recognised as family rank, with family accepted - by APC (2022-11-10) - taxonomic_resolution: family -- find: Monodia sp - replace: Triodia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Moonia sp - replace: Moonia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Mukia sp - replace: Cucumis sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Mukia sp. Longreach (D. Davidson A Q279935) - replace: Mukia sp. (Longreach D.Davidson AQ279935) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Myrtaceae Gen. Nov. sp. (Boonjee B H 6589) - replace: Myrtaceae Gen. Nov. sp. (Boonjee BH 6589) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Myrtella sp - replace: Myrtella sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Najas tenufolia - replace: Najas tenuifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Nesaea sp - replace: Ammannia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Oeceoclades sp - replace: Oeceoclades sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus -- find: Olearia brachyglossa - replace: Olearia brachyglossa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Olearia dampieri - replace: Olearia dampieri MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Olearia sp. (Carnarvon N P W. Morley A Q249966) - replace: Olearia sp. Carnarvon NP (W.Morley AQ249966) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Olearia sp. (Glenavon P. I. Forster+ P I F15039) - replace: Olearia sp. (Glenavon P.I.Forster+ PIF15039) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Olearia sp. Bremer Bay (R. Davis 10528) - replace: Olearia sp. Bremer Bay (R.Davis 10528) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Olearia sp. Carnarvon NP (W.Morley, AQ249966) - replace: Olearia sp. Carnarvon NP (W.Morley AQ249966) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Omalanthus sp - replace: Homalanthus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Orites sp. (Pinnacle Rock Track W W C 867) - replace: Orites sp. (Pinnacle Rock Track WWC 867) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Orthocarpus sp - replace: Orthocarpus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Ottelia ovafolio - replace: Ottelia ovalifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pachycornia sp - replace: Tecticornia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Pachynema sp - replace: Hibbertia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Parahebe sp - replace: Veronica sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Paramignya sp - replace: Paramignya sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Pararistolochia sp - replace: Aristolochia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Paratephrosia sp - replace: Tephrosia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Pennisetum sp - replace: Cenchrus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Pernettya sp - replace: Gaultheria sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Philotheca falcatus - replace: Philotheca falcata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Phreatia sp - replace: Phreatia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Phyllanthus dallachyanus subsp. (Irvinebank P.I.Forster 14675) - replace: Phyllanthus dallachyanus subsp. Irvinebank (P.I.Forster PIF14675) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Phyllanthus sp. (Bridle LA P. I. Forster+ PI F17345) - replace: Phyllanthus sp. ( Bridle LA P.I.Forster+ PIF17345) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Phyllanthus sp. (Bulburin P. I. Forster+ PI F16034) - replace: Phyllanthus sp. Bulburin (P.I.Forster+ PIF16034) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Phyllanthus sp. (Bulimba Station P. I. Forster PI F8421) - replace: Phyllanthus sp. (Bulimba Station P.I.Forster PIF8421) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Phyllanthus sp. (Cardwell A. Thorsborne+ 488) - replace: Phyllanthus sp. Cardwell (A.Thorsborne+ 488) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Phyllanthus sp. (Kidston P. I. Forster+ PI F14945) - replace: Phyllanthus sp. (Kidston P.I.Forster+ PIF14945) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Phyllanthus sp. Coastal North West (J. Z. Weber 4919) - replace: Phyllanthus sp. Coastal North West (J.Z.Weber 4919) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Phyllanthus sp. D Kimberley Flora (C. R. Dunlop 5302) - replace: Phyllanthus sp. D Kimberley Flora (C.R.Dunlop 5302) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pilidiostigma tetramurum - replace: Pilidiostigma tetramerum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pimelea neo-anglica - replace: Pimelea neoanglica - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Pimelea sp. Bakers Blue Mt. (D.G.Fell DF1588) - replace: Pimelea sp. Bakers Blue Mt (D.G.Fell DF1588) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pimelea spinescens subsp. Pubiflora Rye - replace: Pimelea spinescens subsp. pubiflora - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Plectranthus sp. 1 (Nundle, S.Horton s.n., 9/04/1994) - replace: Plectranthus sp. 1 (Nundle; S.Horton s.n., 9/04/1994) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Pleuropappus sp - replace: Angianthus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Podochilus sp - replace: Podochilus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Polyalthia cylindrocarpa - replace: Polyaulax cylindrocarpa - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-10) - taxonomic_resolution: species -- find: Polyalthia sp. (Wyvuri BH 2632 RFK) - replace: Polyalthia sp. (Wyvuri BH 2632RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Polyaulax sp. (Mt. Lewis LWJ 554) - replace: Polyaulax sp. (Mt Lewis LWJ 554) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Polyaulax sp. Mt Lewis - replace: Polyaulax sp. 'Mt Lewis' (L.J.Webb & J.G.Tracey 13731) - reason: match_18. Automatic alignment with infraspecific canonical name in APNI - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Polyosma sp. (Mt Bellenden Ker BH 2524 RFK) - replace: Polyosma sp. (Mt Bellenden Ker BH 2524RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Polyosma sp. (Mt Lewis BH 25241 RFK) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Polyosma sp. (Mt Lewis BH 25241RFK) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Polyosma sp. Mt Lewis (B.Hyland RFK25241) - replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pomaderris x viridis - replace: Pomaderris x [Pomaderris x viridis; Sjostrom_2006] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus -- find: Pongamia sp. (Mc Ilwraith B H 3295 RFK) - replace: Pongamia sp. (McIlwraith BH 3295RFK) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Pouteria pohlmaniana var. pohlmaniana - replace: Pouteria pohlmaniana - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pouteria sp. (Barong M T 22) - replace: Pouteria sp. (Barong M.Tucker 22) - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-10) - taxonomic_resolution: species -- find: Pouteria sp. (Mt Lewis B H 2475 RFK) - replace: Pouteria sp. (Mt Lewis B.P.Hyland 579) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pouteria sp. (Mt Lewis BH 2475RFK) - replace: Pouteria sp. (Mt Lewis B.P.Hyland 579) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pratia sp - replace: Lobelia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Protasparagus sp - replace: Asparagus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Pterostylis sp. Botany Bay (A. Bishop J221/1-13) - replace: Pterostylis sp. Botany Bay (A.Bishop J221/1-13) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pterostylis sp. Halbury (R. Bates 8425) - replace: Pterostylis sp. Halbury (R.Bates 8425) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pterostylis sp. Hale (R. Bates 21725) - replace: Pterostylis sp. Hale (R.Bates 21725) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pterostylis sp. Northampton (S. D. Hopper 3349) - replace: Pterostylis sp. (Northampton) S.D.Hopper 3349 - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Ptilanthelium sp - replace: Schoenus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Ptilotus schwarzii - replace: Ptilotus schwartzii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: species -- find: Pultenaea aff. retusa (Mt Kaye) sensu Fl. Victoria - replace: Pultenaea sp. [Pultenaea aff. retusa (Mt Kaye) sensu Fl. Victoria; Sjostrom_2006] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus -- find: Pultenaea hartmanii - replace: Pultenaea hartmannii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. ' Genowlan Point' (Allen s.n., 29 Nov 1997) - replace: Pultenaea sp. Genowlan Point (Allen s.n., 29 Nov. 1997) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. ' Olinda' (Coveny 6616) - replace: Pultenaea sp. Olinda (R.Coveny 6616) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. (Cracow P. I. Forster P I F7010) - replace: Pultenaea sp. (Cracow P.I.Forster PIF7010) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. (Eidsvold D. Halford Q1783) - replace: Pultenaea sp. (Eidsvold D.Halford Q1783) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. (Maryborough T. Stanley 87) - replace: Pultenaea sp. (Maryborough T.Stanley 87) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. (Narrabri R. G. Coveny+ 8811) - replace: Pultenaea sp. (Narrabri R.G.Coveny+ 8811) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. A sensu Weston -1991 - replace: Pultenaea sp. A aff. ferruginea - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. B sensu Weston -1991 - replace: Pultenaea sp. B - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. C sensu Weston -1991 - replace: Pultenaea sp. C - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. D sensu Weston -1991 - replace: Pultenaea sp. D - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. F sensu Weston -1991 - replace: Pultenaea sp. F - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. G sensu Weston -1991 - replace: Pultenaea sp. G - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Pultenaea sp. H sensu Weston -1991 - replace: Pultenaea sp. H - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) +- find: Hedraianthera sp. (Mossman VKM 2557) + replace: Hedraianthera sp. (Mossman V.K.Moriarty 2557) + reason: match_13_fuzzy. Fuzzy match alignment with infraspecific canonical name + in APC known when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Pultenaea sp. I sensu Weston -1991 - replace: Pultenaea sp. I - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) +- find: Hemigenia dulca + replace: Hemigenia dulcis + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Pultenaea sp. J sensu Weston -1991 - replace: Pultenaea sp. J - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) +- find: Hemigenia sp. Crooked Creek (E.J.Thompson+ CHA 228) + replace: Hemigenia sp. Crooked Creek (E.J.Thompson+ CHA228) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Pultenaea sp. K sensu Weston -1991 - replace: Pultenaea sp. K - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) +- find: Hemigenia sp. Three Springs (S.Patrick 4043A) + replace: Hemigenia sp. Three Springs (S.Patrick 4043 A) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Quassia sp. (Barong B G 742) - replace: Quassia sp. (Barong BG 742) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Hypocalymma linifolium + replace: Hypocalimna linifolium + reason: Fuzzy match of taxon name to an APC-known canonical name once punctuation + and filler words are removed (2023-11-02) + taxonomic_resolution: species +- find: Hypocalymma sp. Cascade (R.Bruhn 20896) + replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) + reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Quassia sp. Mooney Creek (J. King s.n. 1949) - replace: Quassia sp. Mooney Creek (J.King s.n. 1949) +- find: Lasiopetalum sp. Badgingarra (E.A.Griffiths 5278) + replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Quassia species A - replace: Quassia sp. A - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-12) +- find: Lasiopetalum sp. Coorow (E.Reid 101) + replace: Lasiopetalum sp. Coorow (E.Ried 101) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Racosperma sp - replace: Acacia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Rapanea kimberleyensis - replace: Myrsine kimberleyensis - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) +- find: Leptosema cervicorne + replace: Leptosema cervicornu + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Rapanea maccomishii - replace: Rapanea mccomishii - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Leucopogon sp. Bolgart (M.Hislop & F.Hort MH2486) + replace: Leucopogon sp. Bolgart (M.Hislop & F.Hort MH 2486) + reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation + and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Rapanea sp. Emerald JOF 131 - replace: Rapanea sp. (Emerald LA A.K.Irvine 21) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) +- find: Leucopogon sp. Corrigin (K.Kershaw KK2091) + replace: Leucopogon sp. Corrigin (K.Kershaw KK 2091) + reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Rapanea sp. Kimberley KFK 10514 - replace: Rapanea sp. (Kimberley KFK 10514) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) +- find: Leucopogon sp. Great Southern (R.S.Cowan A586) + replace: Leucopogon sp. Great Southern (R.S.Cowan A-586) + reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation + and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Rapanea sp. Ravenshoe CAIRNS 5523 - replace: Rapanea sp. (Ravenshoe H.Flecker NQNC5524) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-10) +- find: Leucopogon sp. Lamington (G.Leiper AQ 633386) + replace: Leucopogon sp. Lamington (G.Leiper AQ633386) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Rapanea sp. Richmond River (J. H. Maiden & J. L. Boorman NSW 26751) - replace: Rapanea sp. Richmond River (J.H.Maiden & J.L.Boorman NSW 26751) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Leucopogon sp. Southern Granite (E.D.Middleton EDM266) + replace: Leucopogon sp. Southern Granite (E.D.Middleton EDM 266) + reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Rapanea sp. Shipton B H 12523 - replace: Rapanea sp. (Shipton BH 12523) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) +- find: Maytenus sp. Mt Coolon (D.Corr PA 409) + replace: Maytenus sp. Mt Coolon (D.Corr PA409) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Rapanea sp. Zarda B H 6898 - replace: Rapanea sp. (Zarda LA B.P.Hyland 6898) +- find: Melichrus hirsutus MS + replace: Melichrus hirsutus reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Rauwenhoffia sp - replace: Uvaria sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Rhagodia sp. Yeelirrie Station (K.A.Shepherd et al. 1396) - replace: Rhagodia sp. Yeelirrie Station (K.A.Shepherd et al. KS 1396) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) +- find: Mirbelia sp. Bursarioides (T..Lally 760) + replace: Mirbelia sp. Bursarioides (T.R.Lally 760) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Rhipogonum brevifolium - replace: Ripogonum brevifolium +- find: Olearia sp. Carnarvon NP (W.Morley, AQ249966) + replace: Olearia sp. Carnarvon NP (W.Morley AQ249966) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Rhodamnia sp. (Cape York L S S 12538) - replace: Rhodamnia sp. (Cape York LSS 12538) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Rhodamnia sp. (Mc Ilwraith Range L J W 9527) - replace: Rhodamnia sp. (McIlwraith Range LJW 9527) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Rhodamnia sp. (Silver Plains B H 2866 RFK) - replace: Rhodamnia sp. (Silver Plains BH 2866RFK) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Rhodomyrtus trineura ssp. capensis - replace: Rhodomyrtus trineura subsp. capensis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) +- find: Phyllanthus dallachyanus subsp. (Irvinebank P.I.Forster 14675) + replace: Phyllanthus dallachyanus subsp. Irvinebank (P.I.Forster PIF14675) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: subspecies -- find: Rhynchophreatia sp - replace: Rhynchophreatia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Rhyssopteris sp - replace: Stigmaphyllon sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Rubus loganobaccus - replace: Rubus loganubaccus - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Pimelea neo-anglica + replace: Pimelea neoanglica + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Rulingia sp - replace: Androcalva sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Rulingia sp. Trigwell Bridge (R. Smith s.n. 20/6/1989) - replace: Rulingia sp. (Trigwell Bridge) +- find: Pimelea sp. Bakers Blue Mt. (D.G.Fell DF1588) + replace: Pimelea sp. Bakers Blue Mt (D.G.Fell DF1588) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Rupicola sp - replace: Epacris sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Ruppia megacearpa - replace: Ruppia megacarpa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Rytidosperma vickeyae - replace: Rytidosperma vickeryae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) +- find: Plectranthus sp. 1 (Nundle, S.Horton s.n., 9/04/1994) + replace: Plectranthus sp. 1 (Nundle; S.Horton s.n., 9/04/1994) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Sapindaceae sp. (Noah Creek B G 6026) - replace: Sapindaceae sp. (Noah Creek BG 6026) +- find: Polyaulax sp. (Mt. Lewis LWJ 554) + replace: Polyaulax sp. (Mt Lewis LWJ 554) reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) taxonomic_resolution: species -- find: Sarcopteryx sp. (Mc Ilwraith Range BH 3261 RFK) - replace: Sarcopteryx sp. (McIlwraith Range BH 3261RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Sarcostemma sp - replace: Cynanchum sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Sarcotoechia sp. (Mountain Sarcotoechia WWC 100) - replace: Sarcotoechia sp. (Mountain Sarcotoechia WWC100) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Polyosma sp. (Mt Lewis BH 25241RFK) + replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) + reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted + when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Sarga angustum - replace: Sarga angusta - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Polyosma sp. Mt Lewis (B.Hyland RFK25241) + replace: Polyosma sp. Mt Lewis (B.P.Hyland RFK25241) + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Sarojusticia sp - replace: Harnieria sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) +- find: Pomaderris x viridis + replace: Pomaderris x [Pomaderris x viridis; Sjostrom_2006] + reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a + genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Sauropus decrescentifolia - replace: Sauropus decrescentifolius - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: species -- find: Sauropus sp. Central Ranges (D. J. Edinger et al.2420) - replace: Sauropus sp. Central Ranges (D.J.Edinger et al. 2420) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) +- find: Pouteria sp. (Mt Lewis BH 2475RFK) + replace: Pouteria sp. (Mt Lewis B.P.Hyland 579) + reason: match_12. Automatic alignment with infraspecific canonical name in APC known + names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Sauropus sp. Cockburn Range (D. Dureau 81) - replace: Sauropus sp. Cockburn Range (D.Dureau 81) +- find: Rhagodia sp. Yeelirrie Station (K.A.Shepherd et al. 1396) + replace: Rhagodia sp. Yeelirrie Station (K.A.Shepherd et al. KS 1396) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Sauropus sp. Woolgorong (M. Officer s.n.10/8/94) - replace: Sauropus sp. Woolgorong (M.Officer s.n. 10/8/94) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) +- find: Rubus loganobaccus + replace: Rubus loganubaccus + reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Schizeilema sp - replace: Azorella sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Scholtzia sp. Jurien (R.J.Cranfield & P.Spencer RJC 8443) replace: Scholtzia sp. Jurien (R.J.Cranfield & P.J.Spencer RJC 8443) reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation @@ -2490,41 +816,11 @@ taxonomic_updates: replace: Scholtzia sp. Valentine Road (S.Patrick 2142) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Sclerochlamys sp - replace: Sclerochlamys sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Sclerostegia sp - replace: Tecticornia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Scyphocoronis sp - replace: Millotia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Sebastiania sp - replace: Sebastiania sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus - find: Seringia katatona replace: Seringia x katatona reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Sinoga sp - replace: Asteromyrtus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Sloanea australis ssp. parviflora - replace: Sloanea australis subsp. parviflora - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies - find: Solanum octonum replace: Solanum octona reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) @@ -2533,11 +829,6 @@ taxonomic_updates: replace: Solanum sp. Prince Regent River (T.HandasydeCH 1925) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Spartothamnella sp - replace: Teucrium sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Spermacoce sp. Garraway Creek (P.I.Forster PIF 15461) replace: Spermacoce sp. Garraway Creek (P.I.Forster PIF15461) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -2550,119 +841,10 @@ taxonomic_updates: replace: Steinchisma laxum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Stelligera sp - replace: Stelligera sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus -- find: Stemmacantha sp - replace: Rhaponticum sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Stenocarpus sp. (Hinchinbrook Is. FDHA Q229860) - replace: Stenocarpus sp. Hinchinbrook Is. (F.D.Hockings AQ229860) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Stenocarpus sp. Hinchinbrook Is. (F.D.Hocking AQ229860) replace: Stenocarpus sp. Hinchinbrook Is. (F.D.Hockings AQ229860) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Stylidium roseo-alatum - replace: Stylidium roseoalatum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp Dewars Pool (K. F. Kenneally 11400) - replace: Stylidium sp. Dewars Pool (K.F.Kenneally 11400) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp. (Aurukun C. Dalliston C C429) - replace: Stylidium sp. Aurukun (C.Dalliston CC429) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp. Bindoon (K. F. Kenneally 11405) - replace: Stylidium sp. Bindoon (K.F.Kenneally 11405) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp. Boulder Rock (A. H. Burbidge 2536) - replace: Stylidium sp. Boulder Rock (A.H.Burbidge 2536) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp. Kalbarri (A. Carr 145) - replace: Stylidium sp. Kalbarri (A.Carr 145) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp. King Cascade (K. F. Kenneally 11173) - replace: Stylidium sp. King Cascade (K.F.Kenneally 11173) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Stylidium sp. Mt Barker (E. J. Croxford 1906) - replace: Stylidium sp. Mt Barker (E.J.Croxford 1906) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Symplectrodia sp - replace: Triodia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Symplocos cochinchinensis ssp. thwaitesii var. gittonsii - replace: Symplocos cochinchinensis var. gittonsii - reason: Manual alignment with canonical name of rank `varietas` in APC (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: variety -- find: Symplocos cochinchinensis ssp. thwaitesii var. glaberrim - replace: Symplocos cochinchinensis var. glaberrima - reason: Manual alignment with canonical name of rank `varietas` in APC (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: variety -- find: Symplocos cochinchinensis ssp. thwaitesii var. pilosiusc - replace: Symplocos cochinchinensis var. pilosiuscula - reason: Manual alignment with canonical name of rank `varietas` in APC (Elizabeth - Wenk, 2022-11-12) - taxonomic_resolution: variety -- find: Symplocos sp. (Mt Finnigan L J B 21029) - replace: Symplocos sp. (Mt Finnigan LJB 20129) - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-10) - taxonomic_resolution: species -- find: Symplocos sp. (North Mary B G 2543) - replace: Symplocos sp. (North Mary B.Gray 2543) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Syncarpia glomulifera ssp. glomulifera - replace: Syncarpia glomulifera subsp. glomulifera - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Synoum glandulosum ssp. paniculosum - replace: Synoum glandulosum subsp. paniculosum - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Syzygium forte ssp. forte - replace: Syzygium forte subsp. forte - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Syzygium forte ssp. potamophilum - replace: Syzygium forte subsp. potamophilum - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Syzygium sp. (Bartle Frere B H 12923) - replace: Syzygium sp. (Bartle Frere BH 12923) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Syzygium sp. (Mt Misery G S 1131) - replace: Syzygium sp. (Mt Misery GS 1131) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-10) - taxonomic_resolution: species -- find: Syzygium wilsonii ssp. cryptophlebium - replace: Syzygium wilsonii subsp. cryptophlebium - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies - find: Taraxacum Celtica (other taxa) Fl. Australia 2015 (A.C.Beauglehole 78369) replace: Taraxacum sect. Celtica (other taxa) Fl. Australia 2015 (A.C.Beauglehole 78369) @@ -2674,20 +856,10 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Tecomaria sp - replace: Tecoma sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Tecticornia sp. Little Sandy Desert (K.Shepherd & C.Wilkins KS830) replace: Tecticornia sp. Little Sandy Desert (K.A.Shepherd & C.Wilkins KS 830) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Tegicornia sp - replace: Tecticornia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Tephrosia sp. Miriam Vale (E.J.Thomson+MIR33) replace: Tephrosia sp. Miriam Vale (E.J.Thompson+ MIR33) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -2700,46 +872,16 @@ taxonomic_updates: replace: Tephrosia sp. Yampi (A.N.Start per R.L.Barrett RLB 2291) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Terminalia aridicola ssp. chillagoensis - replace: Terminalia aridicola subsp. chillagoensis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Terminalia oblongata ssp. volucris - replace: Terminalia oblongata subsp. volucris - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies - find: Terminalia sp. Howick River (D.G.Fell 3249) replace: Terminalia sp. Howick River (D.G.Fell+ DGF3249) reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Ternstroemia cherryi (Bailey) Bailey & C. White - replace: Ternstroemia cherryi - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Tetrasynandra sp. (Mt Lewis B H 1053 RFK) - replace: Tetrasynandra sp. 'Mt Lewis' (B.P.Hyland 7907) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Teucrium sp. Ormeau (G.Leiper AQ 476858) replace: Teucrium sp. Ormeau (G.Leiper AQ476858) reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Thecanthes sp - replace: Pimelea sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Thellungia sp - replace: Sporobolus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Thelymitra merraniae replace: Thelymitra merranae reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -2754,99 +896,10 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-22) taxonomic_resolution: species -- find: Thespesia lampus - replace: Thespesia lampas - reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name - in `APC known` when everything except first 2 words ignored (2022-11-10) - taxonomic_resolution: species -- find: Thomasia sp. Green Hill (S. Paust 1322) - replace: Thomasia sp. Green Hill (S.Paust 1322) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Thonandia sp - replace: Rytidosperma sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Torrenticola sp - replace: Cladopus sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Tournefortia sp - replace: Heliotropium sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Toxanthes sp - replace: Millotia sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Tribulopis sp. Koolan Island (K. F. Kenneally 8278) - replace: Tribulopis sp. Koolan Island (K.F.Kenneally 8728) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Tribulopis sp. Mitchell Plateau (K. F. Kenneally 7935) - replace: Tribulopis sp. Mitchell Plateau (K.F.Kenneally 7935) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Tribulopis sp. Weipa mission - replace: Tribulopis sp. (Weipa Mission R.L.Specht+ W296) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Tribulus sp. Rabbit flat - replace: Tribulus sp. Rabbit Flat (P.K.Latz 4530) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Tribulus sp.long-styled eichlerianus (A. S. George 10666) - replace: Tribulus sp. long-styled eichlerianus (A.S.George 10666) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Tribulus sp.saline - replace: Tribulus sp. saline flats (P.K.Latz 4530) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Trichanthodium baracchanum - replace: Trichanthodium baracchianum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Trichanthodium exile - replace: Trichanthodium exilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Tripogon sp - replace: Tripogonella sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Tristicha sp - replace: Tristicha sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APNI` name (2022-11-10) - taxonomic_resolution: genus - find: Typhonium taylori replace: Typhonium taylorii reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Uldinia sp - replace: Trachymene sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Uncinia sp - replace: Carex sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Uromyrtus sp. (Tinaroo Range G P G 2034) - replace: Uromyrtus sp. (Tinaroo Range G.P.Guymer 2034) - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-10) - taxonomic_resolution: species - find: Uromyrtus sp. (Tinaroo Range GPG 2034) replace: Uromyrtus sp. (Tinaroo Range G.P.Guymer 2034) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -2857,69 +910,14 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Verticordia staminosa subsp. cylindracea var. cylindracea - replace: Verticordia staminosa subsp. cylindracea - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: subspecies -- find: Waterhousea sp - replace: Syzygium sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Wedelia cunninhami - replace: Wedelia cunninghamii - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Wendlandia cannata - replace: Wendlandia connata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Westringia capitonia replace: Westringia capitonis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) taxonomic_resolution: species -- find: Wilkiea sp. (Mt Molloy L S S 3955) - replace: Wilkiea sp. (Mt. Molloy LSS 3955) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Wilkiea sp. (palmerston B H 80 RFK) - replace: Wilkiea sp. (Palmerston BH 80RFK) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species -- find: Wrightia laevis ssp. millgar - replace: Wrightia laevis subsp. millgar - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Wrightia pubescens ssp. penicillata - replace: Wrightia pubescens subsp. penicillata - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Wrightia pubescens ssp. pubescens - replace: Wrightia pubescens subsp. pubescens - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-10) - taxonomic_resolution: subspecies -- find: Wrixonia sp - replace: Prostanthera sp. [Sjostrom_2006] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Xanthostemon sp. Bolt Head (J.R.Clarkson + 8805) replace: Xanthostemon sp. Bolt Head (J.R.Clarkson+ 8805) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Xylopia sp. (Bertiehaugh Homestead C D C C173) - replace: Xylopia sp. (Bertiehaugh Homestead) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species -- find: Xylosma sp. (Mt Lewis G S 1108) - replace: Xylosma sp. (Mt Lewis GS 1108) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Xylosma sp. (Temple Bay) replace: Xylosma sp. (Temple Bay P.I.Forster PIF8980) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -2933,11 +931,6 @@ taxonomic_updates: replace: Xyris atroviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Zieria sp. Brolga Park (A. R. Bean 1002) - replace: Zieria sp. (Brolga Park A.R.Bean 1002) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: species exclude_observations: - variable: taxon_name find: Rourea minor diff --git a/data/Smith_1996/metadata.yml b/data/Smith_1996/metadata.yml index bb52b9829..a1fadd8cb 100644 --- a/data/Smith_1996/metadata.yml +++ b/data/Smith_1996/metadata.yml @@ -26,18 +26,18 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( - life_stage = ifelse(contextual == "juvenile","juvenile", NA), - life_stage = ifelse(contextual == "seedling","seedling", life_stage), + life_stage = ifelse(contextual == "juvenile","juvenile", NA), + life_stage = ifelse(contextual == "seedling","seedling", life_stage), life_stage = ifelse(contextual == "canopy","adult", life_stage), life_stage = ifelse(contextual == "subcanopy sapling","sapling", life_stage), - canopy_position = ifelse(contextual == "canopy", "canopy", NA), + canopy_position = ifelse(contextual == "canopy", "canopy", NA), canopy_position = ifelse(contextual == "subcanopy sapling", "subcanopy", canopy_position), collection_date = ifelse(site2 %in% c("Cascades","Lumeah"),"1993-09/1993-10","1992-12/1993-02"), row_number = row_number() ) %>% - filter(!row_number %in% c(4751, 4746)) + filter(!row_number %in% c(4751, 4746)) ' collection_date: collection_date taxon_name: species @@ -525,8 +525,8 @@ taxonomic_updates: taxonomic_resolution: genus exclude_observations: - variable: taxon_name - find: Shrub no 1, Shrub no 2, Shrub no 3, Shrub no 4 (big opp. leaf), Climber no - 1 (furry leaf), Climber no 2 (wrinkle leaf), Pteridophyte no 1, Epiphyte no 1 + find: shrub no 1, shrub no 2, shrub no 3, shrub no 4 (big opp. leaf), climber no + 1 (furry leaf), climber no 2 (wrinkle leaf), pteridophyte no 1, epiphyte no 1 (mega) reason: too little resolution questions: .na diff --git a/data/Smith_2012/metadata.yml b/data/Smith_2012/metadata.yml index 069efac31..1f3866947 100644 --- a/data/Smith_2012/metadata.yml +++ b/data/Smith_2012/metadata.yml @@ -577,26 +577,6 @@ traits: was measured at 1200 mL L-1 [CO2] and 26 deg C. Each leaf was allowed to stabilise before measurements were taken. substitutions: .na -taxonomic_updates: -- find: Luzuriaga sp. - replace: Geitonoplesium sp. [Smith_2012] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Uncinia sp. - replace: Carex sp. [Smith_2012] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Uncinia sp. [sp. 1] - replace: Carex sp. [Uncinia sp. [sp. 1]; Smith_2012] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-10) - taxonomic_resolution: genus -- find: Uncinia sp. [sp. 3] - replace: Carex sp. [Uncinia sp. [sp. 3]; Smith_2012] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-10) - taxonomic_resolution: genus +taxonomic_updates: .na exclude_observations: .na questions: .na diff --git a/data/Soper_2014/metadata.yml b/data/Soper_2014/metadata.yml index c7193688c..68e7a1b30 100644 --- a/data/Soper_2014/metadata.yml +++ b/data/Soper_2014/metadata.yml @@ -320,14 +320,9 @@ taxonomic_updates: - find: Hakea suberia replace: Hakea suberea reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) - taxonomic_resolution: Species + taxonomic_resolution: species - find: Misteloe - replace: Loranthaceae [Misteloe; Soper_2014] - reason: Manual matched to family for taxon that can't be matcheded to genus (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: family -- find: misteloe - replace: Loranthaceae [misteloe; Soper_2014] + replace: Loranthaceae sp. [Misteloe; Soper_2014] reason: Manual matched to family for taxon that can't be matcheded to genus (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: family @@ -335,19 +330,11 @@ taxonomic_updates: replace: Loranthaceae sp. [Mistletoe on Acacia] reason: manual alignment to family (Elizabeth Wenk, 2022-11-23) taxonomic_resolution: family -- find: Mistletoe on Acacia - replace: Loranthaceae sp. [Mistletoe on Acacia] - reason: manual alignment to family (Elizabeth Wenk, 2022-11-23) - taxonomic_resolution: family - find: mistletoe on Acacia aneura - replace: Loranthaceae or Viscaceae [mistletoe on Acacia aneura; Soper_2014] + replace: Loranthaceae sp. [mistletoe on Acacia aneura; Soper_2014] reason: Manual matched to family for taxon that can't be matcheded to genus (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: family -- find: Mistletoe on Acacia aneura - replace: Loranthaceae sp. [Mistletoe on Acacia aneura; Soper_2014] - reason: manual alignment to family (Elizabeth Wenk, 2022-11-23) - taxonomic_resolution: family - find: Thyridolepis sp. replace: Thyridolepis sp. [Soper_2014] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) diff --git a/data/Standish_2019/metadata.yml b/data/Standish_2019/metadata.yml index 9897e5863..f144fa18d 100644 --- a/data/Standish_2019/metadata.yml +++ b/data/Standish_2019/metadata.yml @@ -20,10 +20,10 @@ contributors: dataset: data_is_long_format: no custom_R_code: ' - data %>% + data %>% mutate( site_name = "Jarrah_forest", - seed_mass_basis_of_record = ifelse(`SM data source` %in% c("Weighed", "Standish et al, unpub data"), + seed_mass_basis_of_record = ifelse(`SM data source` %in% c("Weighed", "Standish et al, unpub data"), "field","literature") ) ' @@ -151,9 +151,6 @@ substitutions: - trait_name: resprouting_capacity find: RESPROUTER replace: resprouts -- trait_name: resprouting_capacity - find: RESPROUTER - replace: resprouts - trait_name: root_structure find: AMF replace: arbuscular_mycorrhizal @@ -219,14 +216,9 @@ substitutions: replace: soil_seedbank taxonomic_updates: - find: Freesia alba x leichtlinii - replace: Freesia x [Freesia alba x leichtlinii; Standish_2019] + replace: Freesia x [Freesia alba x Freesia leichtlinii] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Freesia leichtliniisubsp. leichtlinii x Freesia leichtlinii subsp. alba - replace: Freesia leichtlinii subsp. leichtlinii x Freesia leichtlinii subsp. alba - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-10) - taxonomic_resolution: subspecies exclude_observations: .na questions: .na diff --git a/data/Sweedman_2006/metadata.yml b/data/Sweedman_2006/metadata.yml index 191cba1f3..68af9dead 100644 --- a/data/Sweedman_2006/metadata.yml +++ b/data/Sweedman_2006/metadata.yml @@ -459,10 +459,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2023-06-09) taxonomic_resolution: species -- find: Eucalyptus eyreana MS - replace: Eucalyptus pleurocarpa - reason: Manual rewording to align with APC accepted name (E. Wenk, 2023-06-09) - taxonomic_resolution: species - find: Eucalyptus lateritica replace: Eucalyptus x lateritica reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -562,10 +558,6 @@ taxonomic_updates: replace: Rhodanthe manglesii var. alba reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2023-06-09) taxonomic_resolution: variety -- find: Rhodanthe manglesii var. alba - replace: Rhodanthe manglesii - reason: Manual rewording to align with APC accepted name (E. Wenk, 2023-06-09) - taxonomic_resolution: species - find: Rhodanthe manglesii variant replace: Rhodanthe manglesii reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -579,10 +571,6 @@ taxonomic_updates: replace: Commersonia erythrogyna reason: Manual rewording to align with APC accepted name (E. Wenk, 2023-06-09) taxonomic_resolution: species -- find: Sida virgata var. phaeotricha - replace: Sida phaeotricha - reason: Manual rewording to align with APC accepted name (E. Wenk, 2023-06-09) - taxonomic_resolution: species - find: Sida virgata var. phaetricha replace: Sida virgata var. phaeotricha reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2023-06-09) diff --git a/data/TMAG_2009/metadata.yml b/data/TMAG_2009/metadata.yml index b2bd69893..dcd08419d 100644 --- a/data/TMAG_2009/metadata.yml +++ b/data/TMAG_2009/metadata.yml @@ -424,10 +424,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-23) taxonomic_resolution: subspecies -- find: Sarcocornia quinqueflora subsp. quinqueflora - replace: Salicornia quinqueflora subsp. quinqueflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-12) - taxonomic_resolution: subspecies - find: Tetratheca pilosa subsp. Latifolia replace: Tetratheca pilosa subsp. latifolia reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation diff --git a/data/Vlasveld_2018/metadata.yml b/data/Vlasveld_2018/metadata.yml index 14d2a21f4..291738e37 100644 --- a/data/Vlasveld_2018/metadata.yml +++ b/data/Vlasveld_2018/metadata.yml @@ -158,16 +158,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: subspecies -- find: Eucalyptus eudesmioides subsp. Pallida - replace: Eucalyptus eudesmioides subsp. pallida (D.F.Blaxell 1981, et al.) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-10) - taxonomic_resolution: subspecies -- find: Eucalyptus eudesmioides subsp. Selachiana - replace: Eucalyptus eudesmioides subsp. Selachiana (M.I.H.Brooker 8129) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: subspecies - find: Eucalyptus ophina replace: Eucalyptus sp. [Eucalyptus ophina; Vlasveld_2018] reason: Manual match to genus for taxon that can't be match to species (Elizabeth diff --git a/data/WAH_1998/metadata.yml b/data/WAH_1998/metadata.yml index 037b9087c..e7180ee8f 100644 --- a/data/WAH_1998/metadata.yml +++ b/data/WAH_1998/metadata.yml @@ -289,12 +289,6 @@ taxonomic_updates: reason: Exact match of the first two words of the taxon name to an APC-known canonical name (2023-11-02) taxonomic_resolution: species -- find: 'Caladenia deformis (Cyanicula deformis (R.Br.) Hopper & A.P.Br. ) more recently: - Pheladenia deformis (R.Br.) D.L.Jones & M.A.Clem.' - replace: Caladenia deformis - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Caladenia eminens (Caladenia longicauda subsp. eminens (Domin) Hopper & A.P.Br.) replace: Caladenia eminens reason: match_14. Automatic alignment with species-level name known by APC when diff --git a/data/WAH_2022_1/metadata.yml b/data/WAH_2022_1/metadata.yml index 69f76cf63..2f21cad4f 100644 --- a/data/WAH_2022_1/metadata.yml +++ b/data/WAH_2022_1/metadata.yml @@ -56,10 +56,10 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: no - custom_R_code: ' + custom_R_code: ' data %>% filter(str_detect(taxon_name, " ")) - ' + ' collection_date: unknown/2022 taxon_name: taxon_name description: Plant growth form data extracted from the long profiles on Florabase, @@ -162,4086 +162,49 @@ traits: online website (version date 2022-09-14).Trait values were extracted through algorithms described under the dataset's sampling strategy. substitutions: .na -taxonomic_updates: -- find: Abutilon sp. Cape Range (A.S. George 1312) - replace: Abutilon sp. Cape Range (A.S.George 1312) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Dioicum (A.A. Mitchell PRP 1618) - replace: Abutilon sp. Dioicum (A.A.Mitchell PRP 1618) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Hamelin (A.M. Ashby 2196) - replace: Abutilon sp. Hamelin (A.M.Ashby 2196) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Onslow (F. Smith s.n. 10/9/61) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Pilbara (W.R. Barker 2025) - replace: Abutilon sp. Pilbara (W.R.Barker 2025) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Quobba (H. Demarz 3858) - replace: Abutilon sp. Quobba (H.Demarz 3858) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Warburton (A.S. George 8164) - replace: Abutilon sp. Warburton (A.S.George 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia drummondii subsp. elegans Porongurup variant - replace: Acacia drummondii subsp. elegans Porongurup variant (R.J.Cumming 938) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Acacia eremophila var. Numerous-nerved variant - replace: Acacia eremophila var. Numerous-nerved variant (A.S.George 11924) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Acacia lasiocarpa var. bracteolata long peduncle variant - replace: Acacia lasiocarpa var. bracteolata Long Peduncle variant (G.J.Keighery - 5026) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Acacia lasiocarpa var. lasiocarpa Cockleshell Gully variant - replace: Acacia lasiocarpa var. lasiocarpa Cockleshell Gully variant (E.A.Griffin - 2039) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Acacia lateriticola var. Glabrous variant - replace: Acacia lateriticola var. Glabrous variant (B.R.Maslin 6765) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Acacia leioderma var. Fitzgerald River N.P. variant - replace: Acacia leioderma var. Fitzgerald River N.P. variant (A.S.George 9922) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Acacia monticola x trachycarpa - replace: Acacia monticola x Acacia trachycarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Acacia mutabilis subsp. Young River - replace: Acacia mutabilis subsp. Young River (G.F.Craig 2052) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Acacia pulchella var. reflexa acuminate bracteole variant - replace: Acacia pulchella var. reflexa Acuminate bracteole variant (R.J.Cumming - 882) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Acacia sp. Barklys (J.L. Egan 124) - replace: Acacia sp. Barklys (J.L.Egan 124) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Broome (B.R. Maslin 4918) - replace: Acacia sp. Broome (B.R.Maslin 4918) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Bungalbin Hill (J.J. Alford 1119) - replace: Acacia sp. Bungalbin Hill (J.J.Alford 1119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cadoux (B.R.Maslin 5786) - replace: Acacia sp. Cadoux (B.R.Maslin 5786) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cadoux (B.R. Maslin 5786) - replace: Acacia sp. Cadoux (B.R.Maslin 5786) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cape Arid (A.S.Weston 8164) - replace: Acacia sp. Cape Arid (A.S.Weston 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cape Arid (A.S. Weston 8164) - replace: Acacia sp. Cape Arid (A.S.Weston 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Carson River (M. McDonald MM1890) - replace: Acacia sp. Carson River (M.McDonald MM1890) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cockburn Range (R. Pullen 10.763) - replace: Acacia sp. Cockburn Range (R.Pullen 10.763) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Edgar Range (S.D. Hopper 1763) - replace: Acacia sp. Edgar Range (S.D.Hopper 1763) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Esperance (M.A. Burgman 1833b) - replace: Acacia sp. Esperance (M.A.Burgman 1833b) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. F Kimberley Flora (J.J. Alford 557) - replace: Acacia sp. F Kimberley Flora (J.J.Alford 557) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Goodlands (B.R. Maslin 7761) - replace: Acacia sp. Goodlands (B.R.Maslin 7761) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Jimblebar (S. van Leeuwen 1342) - replace: Acacia sp. Jimblebar (S.van Leeuwen 1342) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie (B.R. Maslin 7571) - replace: Acacia sp. Kalannie (B.R.Maslin 7571) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie (B.R. Maslin 7706) - replace: Acacia sp. Kalannie (B.R.Maslin 7706) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie North (B.R. Maslin 7702) - replace: Acacia sp. Kalannie North (B.R.Maslin 7702) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie North East (B.R. Maslin 7519) - replace: Acacia sp. Kalannie North East (B.R.Maslin 7519) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kulin (S. Murray 504) - replace: Acacia sp. Kulin (S.Murray 504) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kununurra (Lullfitz 6195) - replace: Acacia sp. Kununurra (G.Lullfitz 6195) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Lake King (R. Hnatiuk 760791) - replace: Acacia sp. Lake King (R.Hnatiuk 760791) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Little Sandy Desert (A.S. Mitchell 591) - replace: Acacia sp. Little Sandy Desert (A.S.Mitchell 591) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Manmanning (B.R. Maslin 7711) - replace: Acacia sp. Manmanning (B.R.Maslin 7711) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Marble Bar (J.G. & M.H. Simmons 3499) - replace: Acacia sp. Marble Bar (J.G. & M.H.Simmons 3499) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Minnie Creek (B.R. Maslin 5217) - replace: Acacia sp. Minnie Creek (B.R.Maslin 5217) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Moorine Rock (B.R. Maslin 4474) - replace: Acacia sp. Moorine Rock (B.R.Maslin 4474) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Mt Augustus (S.D. Hopper 3181) - replace: Acacia sp. Mt Augustus (S.D.Hopper 3181) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Mt Jackson (B. Ryan 176) - replace: Acacia sp. Mt Jackson (B.Ryan 176) WA Herbarium - reason: Manual alignment with correct syntax, although not accepted name (E. Wenk, - 2023-06-16) - taxonomic_resolution: species -- find: Acacia sp. Muggon Station (S. Patrick & D. Edinger SP 3235) - replace: Acacia sp. Muggon Station (S.Patrick & D.Edinger SP3235) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Mullewa (B.R. Maslin 4269) - replace: Acacia sp. Mullewa (B.R.Maslin 4269) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. New Norcia (E.A. Griffin 5917) - replace: Acacia sp. New Norcia (E.A.Griffin 5917) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Norseman (B. Archer 1554) - replace: Acacia sp. Norseman (B.Archer 1554) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Nullagine (B.R. Maslin 4955) - replace: Acacia sp. Nullagine (B.R.Maslin 4955) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P174 (J.M. Brown 228) - replace: Acacia sp. P174 (J.M.Brown 228) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P176 (B.R. Maslin 5831) - replace: Acacia sp. P176 (B.R.Maslin 5831) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P19 (A.A. Mitchell 231) - replace: Acacia sp. P19 (A.A.Mitchell 231) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P69 (W.E. Blackall 3754) - replace: Acacia sp. P69 (W.E.Blackall 3754) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P94 (J.S. Beard 6178) - replace: Acacia sp. P94 (J.S.Beard 6178) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Peak Hill (R. Gibson 0003) - replace: Acacia sp. Peak Hill (R.Gibson 0003) - reason: Manual alignment with correct syntax, although not accepted name (E. Wenk, - 2023-06-16) - taxonomic_resolution: species -- find: Acacia sp. Petrudor Rocks (B.R. Maslin 7714) - replace: Acacia sp. Petrudor Rocks (B.R.Maslin 7714) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Ravensthorpe (R.S. Cowan & B.R. Maslin RSC A-760) - replace: Acacia sp. Ravensthorpe (R.S.Cowan & B.R.Maslin RSC A-760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Ravensthorpe Range (B.R. Maslin 5463) - replace: Acacia sp. Ravensthorpe Range (B.R.Maslin 5463) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Riddell Beach (T. Willing 71) - replace: Acacia sp. Riddell Beach (T.Willing 71) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Rudall River (B.R. Maslin 2237) - replace: Acacia sp. Rudall River (B.R.Maslin 2237) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Shark Bay (B.R. Maslin 3682) - replace: Acacia sp. Shark Bay (B.R.Maslin 3682) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Trent River (K.F. Kenneally 11701) - replace: Acacia sp. Trent River (K.F.Kenneally 11701) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Weld Range (A. Markey & S. Dillon 2994) - replace: Acacia sp. Weld Range (A.Markey & S.Dillon 2994) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Wiluna (B.R. Maslin 7090) - replace: Acacia sp. Wiluna (B.R.Maslin 7090) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Windy Corner (P.K. Latz 17865) - replace: Acacia sp. Windy Corner (P.K.Latz 17865) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Acacia sp. Wren Creek Crossing (K.F. Kenneally 11853) - replace: Acacia sp. Wren Creek Crossing (K.F.Kenneally 11853) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. narrow phyllode (B.R. Maslin 7831) - replace: Acacia sp. Narrow phyllode (B.R.Maslin 7831) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. small seed (B.R. Maslin 7830) - replace: Acacia sp. Small seed (B.R.Maslin 7830) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia trachycarpa x tumida var. pilbarensis - replace: Acacia trachycarpa x Acacia tumida var. pilbarensis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. A Kimberley Flora (C.R. Dunlop 5303) - replace: Actinoschoenus sp. A Kimberley Flora (C.R.Dunlop 5303) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. B Kimberley Flora (G.J. Keighery 2649) - replace: Actinoschoenus sp. B Kimberley Flora (G.J.Keighery 2649) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. C Kimberley Flora (P.G. Wilson s.n. 12/5/72) - replace: Actinoschoenus sp. C Kimberley Flora (P.G.Wilson s.n. 12/5/72) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. D Kimberley Flora (K.F. Kenneally 4789) - replace: Actinoschoenus sp. D Kimberley Flora (K.F.Kenneally 4789) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. E Kimberley Flora (C.R. Dunlop 5309) - replace: Actinoschoenus sp. E Kimberley Flora (C.R.Dunlop 5309) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinotus sp. Comet Vale (A.V. Milewski AVM 1093) - replace: Actinotus sp. Comet Vale (A.V.Milewski AVM1093) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinotus sp. Walpole (J.R. Wheeler 3786) - replace: Actinotus sp. Walpole (J.R.Wheeler 3786) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Alyogyne angulata - replace: Alyogyne angulata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne angustiloba - replace: Alyogyne angustiloba MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne coronopifolia - replace: Alyogyne coronopifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne pyrrhophila - replace: Alyogyne pyrrhophila MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Geraldton (R. Davis 3487) - replace: Alyogyne sp. Geraldton (R.Davis 3487) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Great Victoria Desert (D.J. Edinger 6212) - replace: Alyogyne sp. Great Victoria Desert (D.J.Edinger 6212) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hutt River (B.J. Lepschi & T.R. Lally 2310) - replace: Alyogyne sp. Hutt River (B.J.Lepschi & T.R.Lally 2310) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S. Durell GD 127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S.Durrell GD127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Rockingham (G.J. Keighery 14463) - replace: Alyogyne sp. Rockingham (G.J.Keighery 14463) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne wrayae - replace: Alyogyne wrayae MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Amaranthus sp. A Kimberley Flora (C.A. Gardner s.n. PERTH 00326518) - replace: Amaranthus sp. A Kimberley Flora (C.A.Gardner s.n. PERTH 00326518) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Amyema sp. Fortescue (M.E. Trudgen 5358) - replace: Amyema sp. Fortescue (M.E.Trudgen 5358) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Anacampseros sp. Eremaean (F. Hort, J. Hort & J. Shanks 3248) - replace: Anacampseros sp. Eremaean (F.Hort, J.Hort & J.Shanks 3248) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia caerulea subsp. caerulea - replace: Andersonia caerulea var. caerulea - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: variety -- find: Andersonia fallax - replace: Andersonia fallax MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia jamesii - replace: Andersonia jamesii MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia sp. Frankland (W. Jackson BJ8) - replace: Andersonia sp. Frankland (W.Jackson BJ8) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia sp. Lower King (N. Hoyle 1500) - replace: Andersonia sp. Lower King (N.Hoyle 1500) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia sp. Mitchell River (B.G. Hammersley 925) - replace: Andersonia sp. Mitchell River (B.G.Hammersley 925) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Anthocercis sp. Shark Bay (T.E.H. Aplin 3335) - replace: Anthocercis sp. Shark Bay (T.E.H.Aplin 3335) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Anthotium sp. Darling Range (F. Hort & B. Hort 2431) - replace: Anthotium sp. Darling Range (F.Hort & B.Hort 2431) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Anthotium sp. Peaceful Bay (J.R. Wheeler 3772 & S.J. Patrick) - replace: Anthotium sp. Peaceful Bay (J.R.Wheeler 3772 & S.J.Patrick) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Aotus sp. Cunderdin (B.J. Lepschi et al. 3587) - replace: Aotus sp. Cunderdin (B.J.Lepschi et al. 3587) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Aotus sp. Dundas (M.A. Burgman 2835) - replace: Aotus sp. Dundas (M.A.Burgman 2835) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Bungalbin Hill (K.R. Newbey 8989) - replace: Astartea sp. Bungalbin Hill (K.R.Newbey 8989) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Esperance (A. Fairall 2431) - replace: Astartea sp. Esperance (A.Fairall 2431) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Fitzgerald (K.R. Newbey 10844) - replace: Astartea sp. Fitzgerald (K.R.Newbey 10844) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Gingalup (N. Gibson & M. Lyons 119) - replace: Astartea sp. Gingalup (N.Gibson & M.Lyons 119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Hopetoun area (A.S. George 10594) - replace: Astartea sp. Hopetoun area (A.S.George 10594) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Jerdacuttup (A. Strid 21898) - replace: Astartea sp. Jerdacuttup (A.Strid 21898) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Jyndabinbin Rocks (K.R. Newbey 7689) - replace: Astartea sp. Jyndabinbin Rocks (K.R.Newbey 7689) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Mt Dimer (C. McChesney TRL4/72) - replace: Astartea sp. Mt Dimer (C.McChesney TRL4/72) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Mt Johnston (A.R. Annels 5645) - replace: Astartea sp. Mt Johnston (A.R.Annels 5645) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Red Hill (K.R. Newbey 8462) - replace: Astartea sp. Red Hill (K.R.Newbey 8462) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Scott River (D. Backshall 88233) - replace: Astartea sp. Scott River (D.Backshall 88233) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. big bracteoles (A.R. Annels 995) - replace: Astartea sp. big bracteoles (A.R.Annels 995) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. long stalks (D. Foreman 1490) - replace: Astartea sp. long stalks (D.Foreman 1490) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Asterolasia sp. Kalgan River (S. Barrett 1522) - replace: Asterolasia sp. Kalgan River (S.Barrett 1522) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Cataby (E.A. Griffin 1022) - replace: Astroloma sp. Cataby (E.A.Griffin 1022) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Grass Patch (A.J.G. Wilson 110) - replace: Astroloma sp. Grass Patch (A.J.G.Wilson 110) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Nannup (R.D. Royce 3978) - replace: Astroloma sp. Nannup (R.D.Royce 3978) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Tutanning (A.S. George 7779) - replace: Astroloma sp. Tutanning (A.S.George 7779) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. sessile leaf (J.L. Robson 657) - replace: Astroloma sp. sessile leaf (J.L.Robson 657) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Atriplex sp. De Grey (A.A. Mitchell PRP1940) - replace: Atriplex sp. De Grey (A.A.Mitchell PRP1940) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Austrodolichos erubescens - replace: Austrodolichos erubescens MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Baladjie (P.J. Spencer 24) - replace: Baeckea sp. Baladjie (P.J.Spencer 24) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bencubbin-Koorda (M.E. Trudgen 5421) - replace: Baeckea sp. Bencubbin-Koorda (M.E.Trudgen 5421) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Beringbooding (A.R. Main 11/9/1957) - replace: Baeckea sp. Beringbooding (A.R.Main 11/9/1957) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Billeranga Hills (M.E. Trudgen 2206) - replace: Baeckea sp. Billeranga Hills (M.E.Trudgen 2206) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bulla Bulling (D.J.E. Whibley 4648) - replace: Baeckea sp. Bulla Bulling (D.J.E.Whibley 4648) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bungalbin Hill (B.J. Lepschi & L.A. Craven 4586) - replace: Baeckea sp. Bungalbin Hill (B.J.Lepschi & L.A.Craven 4586) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bunjil (B.R. Maslin 5067) - replace: Baeckea sp. Bunjil (B.R.Maslin 5067) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bunney Road (S. Patrick 4059) - replace: Baeckea sp. Bunney Road (S.Patrick 4059) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Calingiri (F. Hort 1710) - replace: Baeckea sp. Calingiri (F.Hort 1710) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Chittering (R.J. Cranfield 1983) - replace: Baeckea sp. Chittering (R.J.Cranfield 1983) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Darling Range (R.J. Cranfield 1673) - replace: Baeckea sp. Darling Range (R.J.Cranfield 1673) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Die Hardy Range (E. Mattiske J91) - replace: Baeckea sp. Die Hardy Range (E.Mattiske J91) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. East Yuna (R. Spjut & C. Edson 7077) - replace: Baeckea sp. East Yuna (R.Spjut & C.Edson 7077) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Elsewhere Road (M.E. Trudgen 5420) - replace: Baeckea sp. Elsewhere Road (M.E.Trudgen 5420) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Eujinyn (J. Buegge D 99) - replace: Baeckea sp. Eujinyn (J.Buegge D 99) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Exclamation Lake (M.E. Trudgen 1524) - replace: Baeckea sp. Exclamation Lake (M.E.Trudgen 1524) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Forrestania (K.R. Newbey 1105) - replace: Baeckea sp. Forrestania (K.R.Newbey 1105) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Gibson (K.R. Newbey 11084) - replace: Baeckea sp. Gibson (K.R.Newbey 11084) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Great Victoria Desert (A.S. Weston 14813) - replace: Baeckea sp. Great Victoria Desert (A.S.Weston 14813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Hatter Hill (K.R. Newbey 3284) - replace: Baeckea sp. Hatter Hill (K.R.Newbey 3284) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Helena & Aurora Range (G.J.Keighery 4424) - replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Helena and Aurora Range (G.J. Keighery 4424) - replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Hyden (J.M. Brown 141) - replace: Baeckea sp. Hyden (J.M.Brown 141) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Jaurdi Station (L.W. Sage & F. Hort 2229) - replace: Baeckea sp. Jaurdi Station (L.W.Sage & F.Hort 2229) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Koorda (W.E. Blackall 3371) - replace: Baeckea sp. Koorda (W.E.Blackall 3371) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Lake Cronin (K.R. Newbey 9191) - replace: Baeckea sp. Lake Cronin (K.R.Newbey 9191) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. London Bridge (M.E. Trudgen 5393) - replace: Baeckea sp. London Bridge (M.E.Trudgen 5393) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Melita Station (H. Pringle 2738) - replace: Baeckea sp. Melita Station (H.Pringle 2738) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Merredin (K.R. Newbey 2506) - replace: Baeckea sp. Merredin (K.R.Newbey 2506) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Mingenew (M.E. Trudgen 12029) - replace: Baeckea sp. Mingenew (M.E.Trudgen 12029) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Moora (R. Bone 1993/1) - replace: Baeckea sp. Moora (R.Bone 1993/1) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Morawa (M.A. Langley MAL4177) - replace: Baeckea sp. Morawa (M.A.Langley MAL4177) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Mount Barloweerie (J.Z. Weber 5079) - replace: Baeckea sp. Mount Barloweerie (J.Z.Weber 5079) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Mt Glasse (P.G. Wilson 5717) - replace: Baeckea sp. Mt Glasse (P.G.Wilson 5717) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Muntadgin (E.T. Bailey 231) - replace: Baeckea sp. Muntadgin (E.T.Bailey 231) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Murchison River (M.E. Trudgen 12009) - replace: Baeckea sp. Murchison River (M.E.Trudgen 12009) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Nanga (A.S. George 11346) - replace: Baeckea sp. Nanga (A.S.George 11346) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Narembeen (G.J. Keighery & N. Gibson 3010) - replace: Baeckea sp. Narembeen (G.J.Keighery & N.Gibson 3010) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Narrogin (R. Hnatiuk 780011) - replace: Baeckea sp. Narrogin (R.Hnatiuk 780011) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Nolba (M.E. Trudgen MET21632) - replace: Baeckea sp. Nolba (M.E.Trudgen MET21632) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. North Ironcap (R.J. Cranfield 10580) - replace: Baeckea sp. North Ironcap (R.J.Cranfield 10580) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Parker Range (M. Hislop & F. Hort MH 2968) - replace: Baeckea sp. Parker Range (M.Hislop & F.Hort MH 2968) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Payne's Find (S.Patrick 1095) - replace: Baeckea sp. Paynes Find (S.Patrick 1095) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Paynes Find (S. Patrick 1095) - replace: Baeckea sp. Paynes Find (S.Patrick 1095) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Perenjori (J.W. Green 1516) - replace: Baeckea sp. Perenjori (J.W.Green 1516) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Perth Region (R.J. Cranfield 444) - replace: Baeckea sp. Perth Region (R.J.Cranfield 444) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Pigeon Rocks (D. Grace DJP 281) - replace: Baeckea sp. Pigeon Rocks (D.Grace DJP 281) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Sandstone (C.A. Gardner s.n. 26 Oct. 1963) - replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Sandstone (C.A.Gardner s.n., 26 Oct. 1963) - replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Sheoaks Rocks (M.E. Trudgen MET5452) - replace: Baeckea sp. Sheoaks Rocks (M.E.Trudgen MET5452) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Baeckea sp. Stockton Road (M.E. Trudgen MET22077 & B. Rye) - replace: Baeckea sp. Stockton Road (M.E.Trudgen MET22077 & B.Rye) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Tammin (R. Coveny 8319 & B. Habberley) - replace: Baeckea sp. Tammin (R.Coveny 8319 & B.Habberley) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Three Springs (M.E. Trudgen 5368) - replace: Baeckea sp. Three Springs (M.E.Trudgen 5368) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Walkaway (A.S. George 11249) - replace: Baeckea sp. Walkaway (A.S.George 11249) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Western Australia (J. Drummond s.n.) - replace: Baeckea sp. Western Australia (J.Drummond s.n.) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Whelarra (A.C. Burns 7) - replace: Baeckea sp. Whelarra (A.C.Burns 7) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Wialki (G.M. Storr s.n. 4/10/1958) - replace: Baeckea sp. Wialki (G.M.Storr s.n. 4/10/1958) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Wubin (M.E. Trudgen 5404) - replace: Baeckea sp. Wubin (M.E.Trudgen 5404) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Yacke Yackine Dam (K.R. Newbey 9195) - replace: Baeckea sp. Yacke Yackine Dam (K.R.Newbey 9195) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Youndegin Hill (A.S. George 15772) - replace: Baeckea sp. Youndegin Hill (A.S.George 15772) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Yuna (M.E. Trudgen 2224) - replace: Baeckea sp. Yuna (M.E.Trudgen 2224) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Banksia dallanneyi subsp. dallanneyi var. dallanneyi - replace: Banksia dallanneyi subsp. dallanneyi - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Banksia dallanneyi subsp. dallanneyi var. mellicula - replace: Banksia dallanneyi var. mellicula - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Banksia nivea subsp. Morangup - replace: Banksia nivea subsp. Morangup (M.Pieroni 9/42) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Banksia sp. Boyup Brook (L.W. Sage LWS 2366) - replace: Banksia sp. Boyup Brook (L.W.Sage LWS 2366) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Baumea preissii subsp. laxa - replace: Baumea preissii subsp. laxa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Beaufortia sp. column (J.S. Beard 8119) - replace: Beaufortia sp. Column (J.S.Beard 8119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. A Ravensthorpe (A.S. George 9474) - replace: Beyeria sp. A Ravensthorpe (A.S.George 9474) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. Bandalup Hill (G. Cockerton 7553) - replace: Beyeria sp. Bandalup Hill (G.Cockerton 7553) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. Jackson Range (R. Cranfield & P. Spencer 7751) - replace: Beyeria sp. Jackson Range (R.Cranfield & P.Spencer 7751) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. Murchison (B. Jeanes s.n. 7/7/2005) - replace: Beyeria sp. Murchison (B.Jeanes s.n. 7/7/2005) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Boronia crenulata subsp. Shark Bay - replace: Boronia crenulata subsp. Shark Bay (G.Cockerton 5187) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Boronia crenulata subsp. crenulata var. angustifolia - replace: Boronia crenulata var. angustifolia - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Boronia sp. Leeuwin (J. Scott 235) - replace: Boronia sp. Leeuwin (J.Scott 235) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Boronia sp. Location 4264 (R. Turner s.n.) - replace: Boronia sp. Location 4264 (R.Turner s.n., 23 Sept. 1999) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Borya sp. Wheatbelt (A.S. George 16470) - replace: Borya sp. Wheatbelt (A.S.George 16470) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Bremer (K. Newbey 2980) - replace: Bossiaea sp. Bremer (K.Newbey 2980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Frankland (E.M. Sandiford EMS 896) - replace: Bossiaea sp. Frankland (E.M.Sandiford EMS 896) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Jackson Range (G. Cockerton & S. McNee LCS 13614) - replace: Bossiaea sp. Jackson Range (G.Cockerton & S.McNee LCS 13614) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Waroona (B.J. Keighery & N. Gibson 229) - replace: Bossiaea sp. Waroona (B.J.Keighery & N.Gibson 229) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Brassica xjuncea - replace: Brassica x juncea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brassica xnapus - replace: Brassica x napus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brunonia sp. Long hairs (D.E. Symon 2440) - replace: Brunonia sp. Long Hairs (D.E.Symon 2440) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brunoniella acaulis var. acaulis - replace: Brunoniella acaulis subsp. acaulis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Caesia sp. Wongan (K.F. Kenneally 8820) - replace: Caesia sp. Wongan (K.F.Kenneally 8820) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia sp. Muddarning Hill (S.D. Hopper 4013) - replace: Caladenia sp. Muddarning Hill (S.D.Hopper 4013) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia sp. Wyalkatchem (G.B. Brockman GBB 661) - replace: Caladenia sp. Wyalkatchem (G.B.Brockman GBB 661) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xaestantha - replace: Caladenia x aestantha - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xcala - replace: Caladenia x cala - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xcoactescens - replace: Caladenia x coactescens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xeludens - replace: Caladenia x eludens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xenigma - replace: Caladenia x enigma - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xericksoniae - replace: Caladenia x ericksoniae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xerminea - replace: Caladenia x erminea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xexoleta - replace: Caladenia x exoleta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xexserta - replace: Caladenia x exserta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xhypata - replace: Caladenia x hypata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xidiastes - replace: Caladenia x idiastes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xlavandulacea - replace: Caladenia x lavandulacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xornata - replace: Caladenia x ornata - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xresupina - replace: Caladenia x resupina - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xspectabilis - replace: Caladenia x spectabilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xsuffusa - replace: Caladenia x suffusa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xtriangularis - replace: Caladenia x triangularis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xtryphera - replace: Caladenia x tryphera - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Bungalbin (G.J. Keighery & N. Gibson 1656) - replace: Calandrinia sp. Bungalbin (G.J.Keighery & N.Gibson 1656) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Coolcalalaya (G.J. Keighery & N. Gibson 698) - replace: Calandrinia sp. Coolcalalaya (G.J.Keighery & N.Gibson 698) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Kenwick (G.J. Keighery 10905) - replace: Calandrinia sp. Kenwick (G.J.Keighery 10905) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Needilup (K.R. Newbey 4892) - replace: Calandrinia sp. Needilup (K.R.Newbey 4892) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Ongerup (K.R. Newbey 11834) - replace: Calandrinia sp. Ongerup (K.R.Newbey 11834) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Piawaning (A.C. Beauglehole 12257) - replace: Calandrinia sp. Piawaning (A.C.Beauglehole 12257) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. The Pink Hills (F. Obbens FO 19/06) - replace: Calandrinia sp. The Pink Hills (F.Obbens FO 19/06) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calectasia grandiflora subsp. Wheatbelt - replace: Calectasia grandiflora (Wheatbelt variant) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Calectasia sp. Pinjar (C. Tauss 557) - replace: Calectasia sp. Pinjar (C.Tauss 557) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Callistachys sp. south-coast variant (M. Carter 180) - replace: Callistachys sp. south-coast variant (M.Carter 180) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calocephalus sp. Pilbara-Desert (M.E. Trudgen 11454) - replace: Calocephalus sp. Pilbara-Desert (M.E.Trudgen 11454) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calocephalus sp. Wittenoom (A.S. George 1082) - replace: Calocephalus sp. Wittenoom (A.S.George 1082) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calochilus sp. Hopetoun (H. Taylor s.n.) - replace: Calochilus sp. Hopetoun (H.Taylor s.n.) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calochilus sp. South-west swamps (B.G. Hammersley 1010) - replace: Calochilus sp. South-west swamps (B.G.Hammersley 1010) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calochilus sp. Wandoo Beard Orchid (D.M. Rose 344) - replace: Calochilus sp. Wandoo Beard Orchid (D.M.Rose 344) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calothamnus sp. Mt Lindesay (B.G. Hammersley 439) - replace: Calothamnus sp. Mt Lindesay (B.G.Hammersley 439) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calothamnus sp. Scott River (R.D. Royce 84) - replace: Calothamnus sp. Scott River (R.D.Royce 84) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calothamnus sp. Whicher (B.J. Keighery & N. Gibson 230) - replace: Calothamnus sp. Whicher (B.J.Keighery & N.Gibson 230) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix acutifolia subsp. brevifolia - replace: Calytrix acutifolia subsp. brevifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Calytrix sp. Dragon Rocks (K. Kershaw & L. Kerrigan KK 2180) - replace: Calytrix sp. Dragon Rocks (K.Kershaw & L.Kerrigan KK 2180) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Eneabba (B.J. Lepschi & T.R. Lally BJL3617) - replace: Calytrix sp. Eneabba (B.J.Lepschi & T.R.Lally BJL3617) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Esperance (M.A. Burgman 4268A) - replace: Calytrix sp. Esperance (M.A.Burgman 4268A) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Jingaring (F. Obbens, R. Davis & L.W. Sage LWS1332) - replace: Calytrix sp. Jingaring (F.Obbens, R.Davis & L.W.Sage LWS1332) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Scarp (H. Bowler 270) - replace: Calytrix sp. Scarp (H.Bowler 270) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Tutunup (G.J. Keighery & N. Gibson 2953) - replace: Calytrix sp. Tutunup (G.J.Keighery & N.Gibson 2953) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Wheatbelt (R. Davis 4544) - replace: Calytrix sp. Wheatbelt (R.Davis 4544) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Canna xgeneralis - replace: Canna x generalis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Canna xorchiodes - replace: Canna x orchiodes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cardamine sp. Jandakot (P. Luff s.n. 4/7/1969) - replace: Cardamine sp. Jandakot (P.Luff s.n. 4/7/1969) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Carpobrotus sp. Thevenard Island (M. White 050) - replace: Carpobrotus sp. Thevenard Island (M.White 050) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cartonema sp. A Kimberley Flora (S.J. Forbes 2163) - replace: Cartonema sp. A Kimberley Flora (S.J.Forbes 2163) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cartonema sp. B Kimberley Flora (D.J. Edinger 336) - replace: Cartonema sp. B Kimberley Flora (D.J.Edinger 336) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caustis sp. Boyanup (G.S. McCutcheon 1706) - replace: Caustis sp. Boyanup (G.S.McCutcheon 1706) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Chamelaucium pauciflorum subsp. thryptomenioides - replace: Chamelaucium pauciflorum subsp. thryptomenoides - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Chamelaucium sp. Yalgoo (Y. Chadwick 1816) - replace: Chamelaucium sp. Yalgoo (Y.Chadwick 1816) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Chrysopogon sp. Zuytdorp (G.J. Keighery & N. Gibson 906) - replace: Chrysopogon sp. Zuytdorp (G.J.Keighery & N.Gibson 906) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Comesperma sp. A Kimberley Flora (K.F. Kenneally 9242) - replace: Comesperma sp. A Kimberley Flora (K.F.Kenneally 9242) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia adenothalia - replace: Commersonia adenothalia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia bivillosa - replace: Commersonia bivillosa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia sp. Bindoon (C. Wilkins & F. & J. Hort CW 2155) - replace: Commersonia sp. Bindoon (C.Wilkins & F. & J.Hort CW 2155) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia sp. Mt Groper (R. Cranfield & D. Kabay 9157) - replace: Commersonia sp. Mount Groper (R.Cranfield & D.Kabay 9157) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Conostylis candicans var. xleptophylla - replace: Conostylis candicans var. x leptophylla - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Corchorus sp. Fitzroy Crossing (A.J. Ewart s.n. PERTH 01526790) - replace: Corchorus sp. Fitzroy Crossing (A.J.Ewart s.n. PERTH 01526790) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Hamersley Range (S. van Leeuwen 3586) - replace: Corchorus sp. Hamersley Range (S.van Leeuwen 3586) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Yarrie (J. Bull & D. Roberts CAL 01.05) - replace: Corchorus sp. Yarrie (J.Bull & D.Roberts CAL 01.05) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Corymbia candida subsp. xlautifolia - replace: Corymbia candida subsp. x lautifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Corymbia xopacula - replace: Corymbia x opacula - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corymbia xpedimontana - replace: Corymbia x pedimontana - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Craspedia arenicola - replace: Craspedia arenicola MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Craspedia argillicola - replace: Craspedia argillicola MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Crocosmia xcrocosmiiflora - replace: Crocosmia x crocosmiiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Crotalaria sp. Chichester Tablelands (A.A. Mitchell PRP226) - replace: Crotalaria sp. Chichester Tablelands (A.A.Mitchell PRP226) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cucumis sp. Bunbury (G. Brayshaw s.n. 26/2/91) - replace: Cucumis sp. Bunbury (G.Brayshaw s.n. 26/2/91) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cyathostemon sp. Dowak (J.M. Fox 86/271) - replace: Cyathostemon sp. Dowak (J.M.Fox 86/271) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cyathostemon sp. Lake King (M.E. & M.E. Trudgen 1462) - replace: Cyathostemon sp. Lake King (M.E. & M.E.Trudgen 1462) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cyathostemon sp. Salmon Gums (B. Archer 769) - replace: Cyathostemon sp. Salmon Gums (B.Archer 769) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cynanchum sp. Hamersley (M. Trudgen 2302) - replace: Cynanchum sp. Hamersley (M.Trudgen 2302) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera angulata subsp. Peak Charles - replace: Dampiera angulata subsp. Peak Charles (K.R.Newbey 5402) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Dampiera diversifolia de - replace: Dampiera diversifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera eriocephala de - replace: Dampiera eriocephala - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera haematotricha de - replace: Dampiera haematotricha - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Dampiera haematotricha de subsp. haematotricha - replace: Dampiera haematotricha subsp. haematotricha - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Dampiera lindleyi de - replace: Dampiera lindleyi - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera sp. Central Wheatbelt (L.W. Sage, F. Hort, C.A. Hollister LWS 2321) - replace: Dampiera sp. Central Wheatbelt (L.W.Sage, F.Hort, C.A.Hollister LWS2321) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera sp. Jurien (G. Lullfitz s.n. 10/7/1986) - replace: Dampiera sp. Jurien (G.Lullfitz s.n. 10/7/1986) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera sp. Wongan Hills (R.D. Royce 6637) - replace: Dampiera sp. Wongan Hills (R.D.Royce 6637) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera trigona de - replace: Dampiera trigona - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Carnamah (J. Coleby-Williams 148) - replace: Darwinia sp. Carnamah (J.Coleby-Williams 148) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Chiddarcooping (S.D. Hopper 6944) - replace: Darwinia sp. Chiddarcooping (S.D.Hopper 6944) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Dryandra (G.J. Keighery 9295) - replace: Darwinia sp. Dryandra (G.J.Keighery 9295) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Gibson (R.D. Royce 3569) - replace: Darwinia sp. Gibson (R.D.Royce 3569) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Morawa (C.A. Gardner 2662) - replace: Darwinia sp. Morawa (C.A.Gardner 2662) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Baring (K.R. Newbey 9775) - replace: Darwinia sp. Mt Baring (K.R.Newbey 9775) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Burdett (N.G. Marchant 80/42) - replace: Darwinia sp. Mt Burdett (N.G.Marchant 80/42) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Ney (M.A. Burgman & S. McNee 1274) - replace: Darwinia sp. Mt Ney (M.A.Burgman & S.McNee 1274) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Ragged (S. Barrett 663) - replace: Darwinia sp. Mt Ragged (S.Barrett 663) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Success (G.J. Keighery 2299) - replace: Darwinia sp. Mt Success (G.J.Keighery 2299) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Peak Charles (A.S. George 10627) - replace: Darwinia sp. Peak Charles (A.S.George 10627) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Ravensthorpe (G.J. Keighery 8030) - replace: Darwinia sp. Ravensthorpe (G.J.Keighery 8030) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Stirling Range (G.J. Keighery 5732) - replace: Darwinia sp. (Stirling Range) G.J.Keighery 5732 - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Thumb Peak (K.R. Newbey 4847) - replace: Darwinia sp. Thumb Peak (K.R.Newbey 4847) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Westdale (F. Hort 864) - replace: Darwinia sp. Westdale (F.Hort 864) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Williamson (G.J. Keighery 12717) - replace: Darwinia sp. Williamson (G.J.Keighery 12717) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Wyalgima Hill (L.W. Sage, J.P. Pigott & E.B. Pigott LWS1549) - replace: Darwinia sp. Wyalgima Hill (L.W.Sage, J.P.Pigott & E.B.Pigott LWS1549) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia thymoides subsp. bella - replace: Darwinia thymoides subsp. bella MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Darwinia thymoides subsp. thymoides - replace: Darwinia thymoides var. thymoides - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Daviesia euryloba - replace: Daviesia eurylobos - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicarpidium sp. A Kimberley Flora (K.F. Kenneally 8686) - replace: Dicarpidium sp. A Kimberley Flora (K.F.Kenneally 8686) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicarpidium sp. B Kimberley Flora (G.J. Keighery 10138) - replace: Dicarpidium sp. B Kimberley Flora (G.J.Keighery 10138) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicarpidium sp. Mt Leake (T. Willing 469) - replace: Dicarpidium sp. Mt Leake (T.Willing 469) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Cue (A.A. Mitchell 764) - replace: Dicrastylis sp. Cue (A.A.Mitchell 764) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Denham (M. Lewis 42/92) - replace: Dicrastylis sp. Denham (M.Lewis 42/92) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Peron Peninsula (M.E. Trudgen 7373) - replace: Dicrastylis sp. Peron Peninsula (M.E.Trudgen 7373) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Digitaria sp. Carson River (A.A. Mitchell 4387) - replace: Digitaria sp. Carson River (A.A.Mitchell 4387) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Capel (P.A. Jurjevich 1771) - replace: Dillwynia sp. Capel (P.A.Jurjevich 1771) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Coolgardie (V.E. Sands 637.3.1) - replace: Dillwynia sp. Coolgardie (V.E.Sands 637.3.1) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Coujinup Hill (M.A. Burgman 1560) - replace: Dillwynia sp. Coujinup Hill (M.A.Burgman 1560) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Northern Sandplains (M. Hislop 3278) - replace: Dillwynia sp. Northern Sandplains (M.Hislop 3278) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Diuris sp. Arrowsmith (K.W. Dixon 924) - replace: Diuris sp. Arrowsmith (K.W.Dixon 924) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Diuris sp. Eneabba (A.H. Burbidge 3941) - replace: Diuris sp. Eneabba (A.H.Burbidge 3941) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drosera xbadgerupii - replace: Drosera x badgerupii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drosera xsidjamesii - replace: Drosera x sidjamesii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drummondita rubroviridis - replace: Drummondita rubriviridis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drummondita sp. Trayning (A.M. George 97) - replace: Drummondita sp. Trayning (A.M.George 97) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Echinochloa crusgalli - replace: Echinochloa crus-galli - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eleocharis sp. A Kimberley Flora (W.V. Fitzgerald 1038) - replace: Eleocharis sp. A Kimberley Flora (W.V.Fitzgerald 1038) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eleocharis sp. B Kimberley Flora (K.F. Kenneally 8727) - replace: Eleocharis sp. B Kimberley Flora (K.F.Kenneally 8272) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Elythranthera xintermedia - replace: Elythranthera x intermedia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Enekbatus roseus - replace: Enekbatus roseus MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eragrostis sp. Mt Robinson (S. van Leeuwen 4109) - replace: Eragrostis sp. Mt Robinson (S.van Leeuwen 4109) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremaea violacea var. violacea - replace: Eremaea violacea subsp. violacea - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eremaea xcodonocarpa - replace: Eremaea x codonocarpa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremaea xphoenicea - replace: Eremaea x phoenicea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremophila sp. Mt Jackson (G.J. Keighery 4372) - replace: Eremophila sp. Mt Jackson (G.J.Keighery 4372) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremophila sp. long pedicels (G. Cockerton 1975) - replace: Eremophila sp. long pedicels (G.Cockerton 1975) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriachne armitii - replace: Eriachne armittii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriocaulon sp. C Kimberley Flora (G.J. Keighery 4610) - replace: Eriocaulon sp. C Kimberley Flora (G.J.Keighery 4610) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriocaulon sp. E Kimberley Flora (A.S. George 12635) - replace: Eriocaulon sp. E Kimberley Flora (A.S.George 12635) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriocaulon sp. G Kimberley Flora (K.F. Kenneally 11374E) - replace: Eriocaulon sp. G Kimberley Flora (K.F.Kenneally 11374E) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eryngium ferox - replace: Eryngium ferox MS - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-21) - taxonomic_resolution: species -- find: Eryngium pinnatifidum subsp. minus - replace: Eryngium pinnatifidum subsp. minus MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eryngium pinnatifidum subsp. umbraphilum - replace: Eryngium pinnatifidum subsp. umbraphilum MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eryngium sp. Lake Muir (E. Wittwer 2293) - replace: Eryngium sp. Lake Muir (E.Wittwer 2293) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Erythrina xsykesii - replace: Erythrina x sykesii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus absita x loxophleba - replace: Eucalyptus absita x Eucalyptus loxophleba - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus aspersa x falcata - replace: Eucalyptus aspersa x Eucalyptus falcata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus balanopelex - replace: Eucalyptus x balanopelex - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x erectifolia - replace: Eucalyptus buprestium x Eucalyptus erectifolia - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x ligulata - replace: Eucalyptus buprestium x Eucalyptus ligulata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x marginata - replace: Eucalyptus buprestium x Eucalyptus marginata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x staeri - replace: Eucalyptus buprestium x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus dielsii x platypus - replace: Eucalyptus dielsii x Eucalyptus platypus - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus falcata subsp. falcata - replace: Eucalyptus falcata var. falcata - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Eucalyptus loxophleba x wandoo - replace: Eucalyptus loxophleba x Eucalyptus wandoo - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus macrocarpa x pyriformis - replace: Eucalyptus macrocarpa x Eucalyptus pyriformis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus marginata x megacarpa - replace: Eucalyptus marginata x Eucalyptus megacarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus marginata x pachyloma - replace: Eucalyptus marginata x Eucalyptus pachyloma - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus oldfieldii subsp. Millar Range - replace: Eucalyptus oldfieldii subsp. Millar Range (M.French 303) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Eucalyptus preissiana x staeri - replace: Eucalyptus preissiana x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus rhodantha var. xpetiolaris - replace: Eucalyptus rhodantha var. x petiolaris - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Eucalyptus sargentii subsp. onesia - replace: Eucalyptus sargentii subsp. onesis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eucalyptus sp. Esperance (M.E. French 1579) - replace: Eucalyptus sp. Esperance (M.E.French 1579) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Eyre (K. Hill & L.A.S. Johnson KH 2170) - replace: Eucalyptus sp. Eyre (K.Hill & L.A.S. Johnson KH 2170) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Fitzgerald River (M.I.H. Brooker 10923) - replace: Eucalyptus sp. Fitzgerald River (M.I.H.Brooker 10923) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Fraser Range (D. Nicolle 2157) - replace: Eucalyptus sp. Fraser Range (D.Nicolle 2157) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. H Kimberley Flora (S.J. Forbes 2560) - replace: Eucalyptus sp. H Kimberley Flora (S.G.Forbes 2560) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Marvel Loch (D. Nicolle & M. French DN 4794) - replace: Eucalyptus sp. Marvel Loch (D.Nicolle & M.French DN 4794) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Ravensthorpe (A.S. George 616) Southern Red Mallee - replace: Eucalyptus sp. Ravensthorpe (A.S.George 616) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Truslove (M.I.H. Brooker 7499) - replace: Eucalyptus sp. Truslove (M.I.H.Brooker 7499) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Wagerup (L. Johnson 9127 & B. Briggs) - replace: Eucalyptus sp. Wagerup (L.Johnson 9127 & B.Briggs) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbalanites - replace: Eucalyptus x balanites - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbennettiae - replace: Eucalyptus x bennettiae - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbrachyphylla - replace: Eucalyptus x brachyphylla - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xcarnabyi - replace: Eucalyptus x carnabyi - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xchrysantha - replace: Eucalyptus x chrysantha - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xerectifolia - replace: Eucalyptus erectifolia - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xerythrandra - replace: Eucalyptus x erythrandra - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus ximpensa - replace: Eucalyptus x impensa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xkalganensis - replace: Eucalyptus x kalganensis - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xlateritica - replace: Eucalyptus x lateritica - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xmissilis - replace: Eucalyptus x missilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xmundijongensis - replace: Eucalyptus x mundijongensis - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xphylacis - replace: Eucalyptus x phylacis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xstoataptera - replace: Eucalyptus x stoataptera - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xtetragona - replace: Eucalyptus x tetragona - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Euphorbia drummondii subsp. drummondii - replace: Euphorbia drummondii var. drummondii - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Euphorbia sp. B Kimberley Flora (B.J. Carter 629) - replace: Euphorbia sp. B Kimberley Flora (B.J.Carter 629) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eutaxia epacridoides subsp. sparsifolia - replace: Eutaxia epacridoides subsp. sparsifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. hirsuta - replace: Eutaxia neurocalyx subsp. hirsuta MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. leptophylla - replace: Eutaxia neurocalyx subsp. leptophylla MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. major - replace: Eutaxia neurocalyx subsp. major MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia sp. Jasper Hill (R.J. Cranfield 8607) - replace: Eutaxia sp. Jasper Hill (R.J.Cranfield 8607) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eutaxia sp. North Ironcap (P. Armstrong PA 06/898) - replace: Eutaxia sp. North Ironcap (P.Armstrong et al. 06/898) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. A Kimberley Flora (A.S. George 13584) - replace: Fimbristylis sp. A Kimberley Flora (A.S.George 13584) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. B Kimberley Flora (K.A. Menkhorst 767) - replace: Fimbristylis sp. B Kimberley Flora (K.A.Menkhorst 767) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. C Kimberley Flora (T.G. Hartley 14511) - replace: Fimbristylis sp. C Kimberley Flora (T.G.Hartley 14511) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. D Kimberley Flora (A.C. Beauglehole 52448) - replace: Fimbristylis sp. D Kimberley Flora (A.C.Beauglehole 52448) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. E Kimberley Flora (C.R. Dunlop 5403) - replace: Fimbristylis sp. E Kimberley Flora (C.R.Dunlop 5403) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. F Kimberley Flora (A.S. George 13789) - replace: Fimbristylis sp. F Kimberley Flora (A.S.George 13789) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. G Kimberley Flora (A.C. Beauglehole 51810) - replace: Fimbristylis sp. G Kimberley Flora (A.C.Beauglehole 51810) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. I Kimberley Flora (R.J. Hnatiuk 112) - replace: Fimbristylis sp. I Kimberley Flora (R.J.Hnatiuk 112) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. K Kimberley Flora (E. Langfield 40) - replace: Fimbristylis sp. K Kimberley Flora (E.Langfield 40) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. L Kimberley Flora (K.F. Kenneally 11167) - replace: Fimbristylis sp. L Kimberley Flora (K.F.Kenneally 11167) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. Shay Gap (K.R. Newbey 10293) - replace: Fimbristylis sp. Shay Gap (K.R.Newby 10293) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Freesia alba x leichtlinii - replace: Freesia alba x Freesia leichtlinii - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Gahnia sp. Headland (G.J. Keighery 8501) - replace: Gahnia sp. Headland (G.J.Keighery 8501) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gahnia sp. L (K.R. Newbey 7888) - replace: Gahnia sp. L (K.R.Newbey 7888) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gahnia sp. dull bases (K.R. Newbey 5111) - replace: Gahnia sp. dull bases (K.R.Newbey 5111) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium sp. East Peak (E.D. Middleton EDM 43) - replace: Gastrolobium sp. East Peak (E.D.Middleton EDM 43) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium sp. Harvey (G.J. Keighery 16821) - replace: Gastrolobium sp. Harvey (G.J.Keighery 16821) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium sp. Prostrate Boddington (M. Hislop 2130) - replace: Gastrolobium sp. Prostrate Boddington (M.Hislop 2130) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium wonganense - replace: Gastrolobium wonganensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A. Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A.Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Marchagee (A. Crawford ADC 1353) - replace: Geleznowia sp. Marchagee (A.Crawford ADC 1353) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia verrucosa subsp. Kalbarri - replace: Geleznowia verrucosa subsp. Kalbarri (L.M.Broadhurst 123) L.M.Broadh. - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Genus sp. Hamersley Range hilltops (S. van Leeuwen 4345) - replace: Genus sp. Hamersley Range hilltops (S.van Leeuwen 4345) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Genus sp. Nillup (R.D. Royce 98) - replace: Genus sp. Nillup (R.D.Royce 98) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Glycine aphyonota - replace: Glycine aphyonotos - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Glycine lactovirens - replace: Glycine lactivirens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Billabong (B. Nordenstam & A. Anderberg 203) - replace: Gnephosis sp. Billabong (B.Nordenstam & A.Anderberg 203) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Norseman (K.R. Newbey 8096) - replace: Gnephosis sp. Norseman (K.R.Newbey 8096) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Pt Quobba (P.G. Wilson 12622) - replace: Gnephosis sp. Pt Quobba (P.G.Wilson 12622) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gompholobium sp. Stirling Range (C.F. Wilkins et al. CW 2513) - replace: Gompholobium sp. Stirling Range (C.F.Wilkins et al. CW 2513) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gomphrena sp. Belele (D.W. Goodall 3215) - replace: Gomphrena sp. Belele (D.W.Goodall 3215) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gomphrena sp. Maret Islands (A.A. Mitchell 5414) - replace: Gomphrena sp. Maret Islands (A.A.Mitchell 5414) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia affinis de - replace: Goodenia affinis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia pinifolia de - replace: Goodenia pinifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia pulchella subsp. Coastal Plain A - replace: Goodenia pulchella subsp. Coastal Plain A (M.Hislop 634) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Coastal Plain B - replace: Goodenia pulchella subsp. Coastal Plain B (L.W.Sage 2336) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Dragon Rocks - replace: Goodenia pulchella subsp. Dragon Rocks (A.M.Coates 3374) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Mt Barker - replace: Goodenia pulchella subsp. Mt Barker (K.F.Kenneally 1166) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Wheatbelt - replace: Goodenia pulchella subsp. Wheatbelt (L.W.Sage & F.Hort 795) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia sp. Bachsten Creek (M.D. Barrett 685) - replace: Goodenia sp. Bachsten Creek (M.D.Barrett 685) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Beyondie (L.W. Sage & S. van Leeuwen LWS 2518) - replace: Goodenia sp. Beyondie (L.W.Sage & S.J.van Leeuwen LWS 2518) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Carnarvon Range (D.J. Edinger Nats 30) - replace: Goodenia sp. Carnarvon Range (D.J.Edinger Nats 30) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Dampier Peninsula (B.J. Carter 675) - replace: Goodenia sp. Dampier Peninsula (B.J.Carter 675) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Little Sandy Desert (A.S. Mitchell 989) - replace: Goodenia sp. Little Sandy Desert (A.S.Mitchell 989) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Mount Bomford (M.D. Barrett 423) - replace: Goodenia sp. Mount Bomford (M.D.Barrett 423) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Mt Elvire (D.J. Edinger 1857) - replace: Goodenia sp. Mt Elvire (D.J.Edinger 1857) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. South Coast (A.R. Annels ARA 1846) - replace: Goodenia sp. South Coast (A.R.Annels 1846) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Stirling Range (R. Cranfield & D. Kabay 9148) - replace: Goodenia sp. Stirling Range (R.Cranfield & D.Kabay 9148) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia xanthotricha de - replace: Goodenia xanthotricha - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grammosolen sp. Mt Ridley (W.R. Archer 1210911) - replace: Grammosolen sp. Mt Ridley (W.R.Archer 1210911) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grevillea bronwenae - replace: Grevillea bronweniae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Gunapin (F. Hort 308) - replace: Grevillea sp. Gunapin (F.Hort 308) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Stirling Range (D.J. McGillivray 3488 & A.S. George) - replace: Grevillea sp. Stirling Range (D.J.McGillivray 3488 & A.S.George) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Grevillea sp. Victoria Desert (R. Davis et al. RD 11611) - replace: Grevillea sp. Victoria Desert (R.Davis et al. RD 11611) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Yerilgee Hills (T. Laslett TL 025) - replace: Grevillea sp. Yerilgee Hills (T.Laslett TL 025) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea squiresae - replace: Grevillea squiresiae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Guichenotia basivirida - replace: Guichenotia basiviridis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gunniopsis sp. Nuytsland (G.J. Keighery & J.J. Alford 522) - replace: Gunniopsis sp. Nuytsland (G.J.Keighery & J.J.Alford 522) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gyrostemon sp. Whoogarup Range (A.S. George 1910) - replace: Gyrostemon sp. Whoogarup Range (A.S.George 1910) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Haemodorum sp. A Kimberley Flora (K.F. Kenneally 8639) - replace: Haemodorum sp. A Kimberley Flora (K.F.Kenneally 8639) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea cygna - replace: Hakea cygnus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea cygna subsp. needlei - replace: Hakea cygnus subsp. needlei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Hakea sp. Great Victoria Desert (L. Cockram LAC 139) - replace: Hakea sp. Great Victoria Desert (L.Cockram LAC 139) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (B. Keighery 2599) - replace: Hakea sp. Walyunga (B.Keighery 2599) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (L. Penn s.n.) - replace: Hakea sp. Walyunga (L.Penn s.n.) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Yalgorup (B.J. Keighery & N. Gibson 897) - replace: Hakea sp. Yalgorup (B.J.Keighery & N.Gibson 897) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halgania sp. A Kimberley Flora (H.A. Johnson 5123) - replace: Halgania sp. A Kimberley Flora (H.A.Johnson 5123) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halgania sp. Peak Eleanora (M.A. Burgman 3547 B) - replace: Halgania sp. Peak Eleanora (M.A.Burgman 3547 B) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halgania sp. Wongan Hills (K.F. Kenneally 2393) - replace: Halgania sp. Wongan Hills (K.F.Kenneally 2393) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halosarcia halocnemoides subsp. Lake Grace - replace: Halosarcia halocnemoides subsp. Lake Grace ( N.Casson G231.10) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Halosarcia sp. Lake Moore (M.N. Lyons 2603) - replace: Halosarcia sp. Lake Moore (M.N.Lyons 2603) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Harmsiodoxa sp. Eremaean (A.S. George 3894) - replace: Harmsiodoxa sp. Eremaean (A.S.George 3894) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Bachsten Creek (R.L. Barrett & M.D. Barrett RLB 3808) - replace: Helicteres sp. Bachsten Creek (R.L.Barrett & M.D.Barrett RLB 3808) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Carson River (I. Cowie & Wendell IC 4232) - replace: Helicteres sp. Carson River (I.Cowie & Wendell IC 4232) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Manning Peak (K.F. Kenneally 10266 & B.P.M. Hyland) - replace: Helicteres sp. Manning Peak (K.F.Kenneally 10266 & B.P.M.Hyland) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mertens Falls (K.F. Kenneally 7887) - replace: Helicteres sp. Mertens Falls (K.F.Kenneally 7887) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mt Shadforth (I.R. Telford 11609) - replace: Helicteres sp. Mt Shadforth (I.R.Telford 11609) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemiandra sp. Eneabba (H. Demarz 3687) - replace: Hemiandra sp. Eneabba (H.Demarz 3687) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Arrino (J.J. Alford 1175) - replace: Hemigenia sp. Arrino (J.J.Alford 1175) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Cue (K.F. Kenneally 47A) - replace: Hemigenia sp. Cue (K.F.Kenneally 47A) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Dalwallinu (W.E. Blackall 2870) - replace: Hemigenia sp. Dalwallinu (W.E.Blackall 2870) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Edah (J.W. Green 1601) - replace: Hemigenia sp. Edah (J. W.Green 1601) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Gibson (R. Coveny 7893 & B.R. Maslin) - replace: Hemigenia sp. Gibson (R.Coveny 7893 & B.R.Maslin) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Glenburgh (R.J. Cranfield 9725) - replace: Hemigenia sp. Glenburgh (R.J.Cranfield 9725) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Jibberding (J. D'Alonzo 418) - replace: Hemigenia sp. Jibberding (J.D'Alonzo 418) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Merredin (M. Koch 2959) - replace: Hemigenia sp. Merredin (M.Koch 2959) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Newdegate (E. Bishop 75) - replace: Hemigenia sp. Newdegate (E.Bishop 75) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Paynes Find (A.C. Beauglehole 49138) - replace: Hemigenia sp. Paynes Find (A.C.Beauglehole 49138) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Pindar (H. Demarz 7428) - replace: Hemigenia sp. Pindar (H.Demarz 7428) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Tallering (H. Pringle 3323) - replace: Hemigenia sp. Tallering (H.Pringle 3323) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Wilroy (B.J. Conn 2150) - replace: Hemigenia sp. Wilroy (B.J.Conn 2150) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Yalgoo (A.M. Ashby 2624) - replace: Hemigenia sp. Yalgoo (A.M.Ashby 2624) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Yuna (A.C. Burns 95) - replace: Hemigenia sp. Yuna (A.C.Burns 95) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. major (C.A. Gardner 2677) - replace: Hemigenia sp. major (C.A.Gardner 2677) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibbertia sp. A Kimberley Flora (T.E.H. Aplin et al. 898) - replace: Hibbertia sp. A Kimberley Flora (T.E.H.Aplin et al. 898) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hibbertia sp. Kojonup (C.M. Lewis 288) - replace: Hibbertia sp. Kojonup (C.M.Lewis 288) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibbertia sp. Tathra (M.A. Langley & J.M. Harvey 1873) - replace: Hibbertia sp. Tathra (M.A.Langley & J.M.Harvey 1873) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. A Kimberley Flora (E.A. Chesterfield 310) - replace: Hibiscus sp. A Kimberley Flora (E.A.Chestfield 310) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. B Kimberley Flora (P.G. Wilson 11143) - replace: Hibiscus sp. B Kimberley Flora (P.G.Wilson 11143) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Canga (P.J.H. Hurter & J. Naaykens 11013) - replace: Hibiscus sp. Canga (P.J.H.Hurter & J.Naaykens 11013) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Brockman (E. Thoma ET 1354) - replace: Hibiscus sp. Mt Brockman (E.Thoma ET 1354) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Robinson (G. Byrne 3537) - replace: Hibiscus sp. Mt Robinson (G.Byrne 3537) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Theda (M.D. Barrett & R.L. Barrett MDB 2144) - replace: Hibiscus sp. Theda (M.D.Barrett & R.L.Barrett MDB 2144) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Wonganoo Station (K. Boladeras 125) - replace: Hibiscus sp. Wonganoo Station (K.Boladeras 125) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydatella sp. Austin Bay (N. Gibson & M. Lyons 2387) - replace: Hydatella sp. Austin Bay (N.Gibson & M.Lyons 2387) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle coorowensis - replace: Hydrocotyle coorowensis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle coraginaensis - replace: Hydrocotyle coraginaensis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle crassipes - replace: Hydrocotyle crassipes MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle decipiens - replace: Hydrocotyle decipiens MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle hexaptera - replace: Hydrocotyle hexaptera MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle sp. Truslove (M.A. Burgman 4419) - replace: Hydrocotyle sp. Truslove (M.A.Burgman 4419) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle sp. Warriedar (P.G. Wilson 12267) - replace: Hydrocotyle sp. Warriedar (P.G.Wilson 12267) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle vigintimilia - replace: Hydrocotyle vigintimilia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hypocalymma sp. Cascade (R. Bruhn 20896) - replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hypocalymma sp. Cataby (G.J. Keighery 5151) - replace: Hypocalymma sp. Cataby (G.J.Keighery 5151) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hypoxis sp. Prince Regent River (M.D. Barrett 924 B) - replace: Hypoxis sp. Prince Regent River (M.D.Barrett 924 B) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera mackinlayi - replace: Indigofera mckinlayi - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. A Kimberley Flora (G.J. Keighery & N. Gibson 70) - replace: Indigofera sp. A Kimberley Flora (G.J.Keighery & N.Gibson 70) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Bungaroo Creek (S. van Leeuwen 4301) - replace: Indigofera sp. Bungaroo Creek (S.van Leeuwen 4301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Mackinlayi (A.A. Mitchell 7086) - replace: Indigofera sp. Mackinlayi (A.A.Mitchell 7086) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Warburton (A.A. Munir 5209) - replace: Indigofera sp. Warburton (A.A.Munir 5209) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ipomoea sp. A Kimberley Flora (L.J. Penn 84) - replace: Ipomoea sp. A Kimberley Flora (L.J.Pen 84) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ipomoea sp. Kalumburu (A.A. Mitchell 3869B) - replace: Ipomoea sp. Kalumburu (A.A.Mitchell 3869B) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Canning Reservoir (M.D. Tindale 121 & B.R. Maslin) - replace: Isopogon sp. Canning Reservoir (M.D.Tindale 121 & B.R.Maslin) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Darling Range (F. Hort 1662) - replace: Isopogon sp. Darling Range (F.Hort 1662) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Fitzgerald River (D.B. Foreman 813) - replace: Isopogon sp. Fitzgerald River (D.B.Foreman 813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Ravensthorpe (D.B. Foreman 1207) - replace: Isopogon sp. Ravensthorpe (D.B.Foreman 1207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Watheroo (D. Foreman 477) - replace: Isopogon sp. Watheroo (D.Foreman 477) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Isotoma hypocrateriformis var. cristata - replace: Isotoma hypocrateriformis var. cristata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Isotropis sp. Arid zone (G. Byrne 2775) - replace: Isotropis iophyta - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Isotropis sp. Shark Bay (M.E. Trudgen 7170) - replace: Isotropis sp. Shark Bay (M.E.Trudgen 7170) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isotropis sp. Yalgoo (S. Patrick 2375) - replace: Isotropis petrensis - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Jasminum sp. Exmouth (G. Marsh 77) - replace: Jasminum sp. Exmouth (G.Marsh 77) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Josephinia sp. Marandoo (M.E. Trudgen 1554) - replace: Josephinia sp. Marandoo (M.E.Trudgen 1554) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Josephinia sp. Mt Edgar Station (N.T. Burbidge 1194) - replace: Josephinia sp. Mt Edgar Station (N.T.Burbidge 1194) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Kennedia sp. South coast (T.R. Lally 1576 & I.P. Lally) - replace: Kennedia sp. south coast (T.R.Lally 1576 & I.P.Lally) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia adenogyna - replace: Keraudrenia adenogyna MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. cacaobrunnea ms - replace: Keraudrenia cacaobrunnea MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. undulata - replace: Keraudrenia cacaobrunnea subsp. undulata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Keraudrenia saxatilis - replace: Keraudrenia saxatilis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia velutina subsp. elliptica - replace: Keraudrenia velutina subsp. elliptica MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Keraudrenia velutina subsp. velutina - replace: Keraudrenia velutina - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Lambertia orbifolia subsp. Scott River Plains - replace: Lambertia orbifolia subsp. Scott River Plains (L.W.Sage 684) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Lasiopetalum leucogriseum - replace: Lasiopetalum leucogriseum MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Badgingarra (E.A. Griffin 5278) - replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E. Ried 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E.Reid 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Denmark (B.G. Hammersley 2012) - replace: Lasiopetalum sp. Denmark (B.G.Hammersley 2012) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Desmond (N. McQuoid 653) - replace: Lasiopetalum sp. Desmond (N.McQuoid 653) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Hill River (T.N. Stoate 5) - replace: Lasiopetalum sp. Hill River (T.N.Stoate 5) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Kukerin (C.A. Gardner 13646) - replace: Lasiopetalum sp. Kukerin (C.A.Gardner 13646) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Caroline (S.D. Hopper SDH 6381) - replace: Lasiopetalum sp. Mount Caroline (S.D.Hopper SDH 6381) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Lesueur (E.A. Griffin 1997) - replace: Lasiopetalum sp. Mount Lesueur (E.A.Griffin 1997) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mt Ragged (T.E.H. Aplin 4349) - replace: Lasiopetalum sp. Mt Ragged (T.E.H.Aplin 4349) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Northam (F. Hort 1196) - replace: Lasiopetalum sp. Northam (F.Hort 1196) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Toodyay (F. Hort 2689) - replace: Lasiopetalum sp. Toodyay (F.Hort 2689) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Watheroo (K. Shepherd & C. Wilkins KS 220) - replace: Lasiopetalum erectifolium - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Weam Reserve (M. Hislop 2755) - replace: Lasiopetalum sp. Weam Reserve (M.Hislop 2755) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Latrobea pinnacula - replace: Latrobea pinnaculum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Latrobea sp. South Coast (A.M. Ashby 1949) - replace: Latrobea sp. South Coast (A.M.Ashby 1949) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lawrencia sp. Anna Plains (N.T. Burbidge 1433) - replace: Lawrencia sp. Anna Plains (N.T.Burbidge 1433) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Lechenaultia formosa subsp. Wheatbelt - replace: Lechenaultia formosa subsp. 'Wheatbelt' (R.J.Cranfield 4718) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Lepidobolus preissianus subsp. arcuatus - replace: Lepidobolus preissianus subsp. 'arcuatus' - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Lepidosperma sp. A2 Island Flat (G.J. Keighery 7000) - replace: Lepidosperma sp. A2 Island Flat (G.J.Keighery 7000) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. Giant Terete Culms (S.D. Hopper 8631) - replace: Lepidosperma sp. Giant Terete Culms (S.D.Hopper 8631) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. K Boorabbin (K.L. Wilson 2579) - replace: Lepidosperma sp. K Boorabbin (K.L.Wilson 2579) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. P1 small head (M.D. Tindale 166A) - replace: Lepidosperma sp. P1 small head (M.D.Tindale 166A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. U1 big heads (A.S. George 11294) - replace: Lepidosperma sp. U1 big heads (A.S.George 11294) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. Z dark sheath (P.G. Wilson 10177) - replace: Lepidosperma sp. Z dark sheath (P.G.Wilson 10177) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leptosema cervicorne - replace: Leptosema cervicornu - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leptospermum sp. Peak Charles/Norseman (K.R. Newbey 5243) - replace: Leptospermum sp. Peak Charles/Norseman (K.R.Newbey 5243) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Leucanthemum xsuperbum - replace: Leucanthemum x superbum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon compressicarpus - replace: Leucopogon compressicarpus MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon inflexifolius - replace: Leucopogon inflexifolius MS - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Badgingarra (R. Davis 421) - replace: Leucopogon sp. Badgingarra (R.Davis 421) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Barren Range (A.S. George 10092) - replace: Leucopogon sp. Barren Range (A.S.George 10092) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bifid Eneabba (M. Hislop 1927) - replace: Leucopogon sp. Bifid Eneabba (M.Hislop 1927) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bindoon (F. Hort 2766) - replace: Leucopogon sp. Bindoon (F.Hort 2766) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bonnie Hill (K.R. Newbey 9831) - replace: Leucopogon sp. Bonnie Hill (K.R.Newbey 9831) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Boyagin (M. Hislop 2825) - replace: Leucopogon sp. Boyagin (M.Hislop 2825) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bremer Bay (K.R. Newbey 4667) - replace: Leucopogon sp. Bremer Bay (K.R.Newbey 4667) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Brookton (K. Kershaw & L. Kerrigan KK 2192) - replace: Leucopogon sp. Brookton (K.Kershaw & L.Kerrigan KK2192) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bungulla (R.D. Royce 3435) - replace: Leucopogon sp. Bungulla (R.D.Royce 3435) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Cape Arid (M. Paxman 50) - replace: Leucopogon sp. Cape Arid (M.Paxman 50) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Clyde Hill (M.A. Burgman 1207) - replace: Leucopogon sp. Clyde Hill (M.A.Burgman 1207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Coolgardie (M. Hislop & F. Hort MH 3197) - replace: Leucopogon sp. Coolgardie (M.Hislop & F.Hort MH3197) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Corrigin (K. Kershaw KK 2091) - replace: Leucopogon sp. Corrigin (K.Kershaw KK 2091) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Coujinup (M.A. Burgman 1085) - replace: Leucopogon sp. Coujinup (M.A.Burgman 1085) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Darradup (R.D. Royce 2998) - replace: Leucopogon sp. Darradup (R.D.Royce 2998) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Denmark (J.M. Powell 1167) - replace: Leucopogon sp. Denmark (J.M.Powell 1167) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Flynn (F. Hort, J. Hort & A. Lowrie 859) - replace: Leucopogon sp. Flynn (F.Hort, J.Hort & A.Lowrie 859) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Gunapin (F. Hort 808) - replace: Leucopogon sp. Gunapin (F.Hort 808) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Howatharra (D. & N. McFarland 1046) - replace: Leucopogon sp. Howatharra (D. & N.McFarland 1046) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Ironcaps (N. Gibson & K. Brown 3070) - replace: Leucopogon sp. Ironcaps (N.Gibson & K.Brown 3070) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Kalbarri (J.M. Powell 1695) - replace: Leucopogon sp. Kalbarri (J.M.Powell 1695) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Kau Rock (M.A. Burgman 1126) - replace: Leucopogon sp. Kau Rock (M.A.Burgman 1126) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Lake King (A.J.G. Wilson 65) - replace: Leucopogon sp. Lake King (A.J.G.Wilson 65) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Lesueur (B. Evans 530) - replace: Leucopogon sp. Lesueur (B.Evans 530) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Lort River (M. Golding 3) - replace: Leucopogon sp. Lort River (M.Golding 3) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Margaret River (J. Scott 207) - replace: Leucopogon sp. Margaret River (J.Scott 207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Mid West (J.S. Beard 7388) - replace: Leucopogon sp. Mid West (J.S.Beard 7388) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Moore River (M. Hislop 1695) - replace: Leucopogon sp. Moore River (M.Hislop 1695) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Moresby Range (S. Patrick 2614) - replace: Leucopogon sp. Moresby Range (S.Patrick 2614) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Mount Heywood (M.A. Burgman 1211) - replace: Leucopogon sp. Mount Heywood (M.A.Burgman 1211) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Murdoch (M. Hislop 1037) - replace: Leucopogon sp. Murdoch (M.Hislop 1037) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Ongerup (A.S. George 16682) - replace: Leucopogon sp. Ongerup (A.S.George 16682) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Pingrup (W.E. Blackall 3010) - replace: Leucopogon sp. Pingrup (W.E.Blackall 3010) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Roberts Swamp (K.R. Newbey 8173) - replace: Leucopogon sp. Roberts Swamp (K.R.Newbey 8173) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Salt Lake (G.F. Craig 3069) - replace: Leucopogon sp. Salt Lake (G.F.Craig 3069) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. South Coast (K.R. Newbey 8213) - replace: Leucopogon sp. South Coast (K.R.Newbey 8213) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Southern Granite (E.D. Middleton EDM 266) - replace: Leucopogon sp. Southern Granite (E.D.Middleton EDM 266) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Twertup (K.R. Newbey 10859) - replace: Leucopogon sp. Twertup (K.Newbey 10859) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Walpole (R.J. Cranfield 10940) - replace: Leucopogon sp. Walpole (R.J.Cranfield 10940) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Wandering (F. Hort 419) - replace: Leucopogon sp. Wandering (F.Hort 419) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Warradarge (M. Hislop 1908) - replace: Leucopogon sp. Warradarge (M.Hislop 1908) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Wheatbelt (S. Murray 257) - replace: Leucopogon sp. Wheatbelt (S.Murray 257) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Whicher Range (G.J. Keighery 11763) - replace: Leucopogon sp. Whicher Range (G.J.Keighery 11763) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Windy Harbour (A. Strid 21460) - replace: Leucopogon sp. Windy Harbour (A.Strid 21460) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Yanchep (M. Hislop 1986) - replace: Leucopogon sp. Yanchep (M.Hislop 1986) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Yanneymooning (F. Mollemans 3797) - replace: Leucopogon sp. Yanneymooning (F.Mollemans 3797) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. ciliate Eneabba (F. Obbens & C. Godden s.n. 3/7/2003) - replace: Leucopogon sp. ciliate Eneabba (F.Obbens & C.Godden s.n. 3/7/2003) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. outer wheatbelt (M. Hislop 30) - replace: Leucopogon sp. outer wheatbelt (M.Hislop 30) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lobelia rhombifolia de - replace: Lobelia rhombifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lolium perenne x rigidum - replace: Lolium perenne subsp. rigidum - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Lolium xhubbardii - replace: Lolium x hubbardii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lysinema ciliatum forma - replace: Lysinema ciliatum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Maireana sp. Patience (C.P. Campbell 1052) - replace: Maireana sp. Patience (C.P.Campbell 1052) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Adelong (G.J. Keighery 11825) - replace: Malleostemon sp. Adelong (G.J.Keighery 11825) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Cooljarloo (B. Backhouse s.n. 16/11/88) - replace: Malleostemon sp. Cooljarloo (B.Backhouse s.n. 16/11/88) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Cooloomia (S.D. Hopper 1353) - replace: Malleostemon sp. Cooloomia (S.D.Hopper 1353) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Erangy Springs (M.E. Trudgen 12030) - replace: Malleostemon sp. Erangy Springs (M.E.Trudgen 12030) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Hardabutt Rapids (D. Bellairs 1654A) - replace: Malleostemon sp. Hardabutt Rapids (D.Bellairs 1654A) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Kalbarri (L.A. Craven 7083) - replace: Malleostemon sp. Kalbarri (L.A.Craven 7083) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Moonyoonooka (R.J. Cranfield 2947) - replace: Malleostemon sp. Moonyoonooka (R.J.Cranfield 2947) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Mullewa (P. Winson B7365) - replace: Malleostemon sp. Mullewa (P.Winson B7365) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Nerren Nerren (A. Payne 360) - replace: Malleostemon sp. Nerren Nerren (A.Payne 360) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Officer Basin (D. Pearson 350) - replace: Malleostemon sp. Officer Basin (D.Pearson 350) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Woolgorong Station (M. Officer 100) - replace: Malleostemon sp. Woolgorong Station (M.Officer 100) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Yerina (S.J. Patrick 2728) - replace: Malleostemon sp. Yerina (S.J.Patrick 2728) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Marianthus sp. Bremer (N. Gibson & M. Lyons 1776) - replace: Marianthus sp. Bremer (N.Gibson & M.Lyons 1776) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Maytenus sp. Mt Windell (S. van Leeuwen 846) - replace: Maytenus sp. Mt Windell (S.van Leeuwen 846) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Melaleuca sp. Dongolocking (G.J. Keighery & N. Gibson 2896) - replace: Melaleuca sp. Dongolocking (G.J.Keighery & N.Gibson 2896) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Melaleuca sp. Gorse (A.S. George 7224) - replace: Melaleuca sp. Gorse (A.S.George 7224) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Melaleuca xarenicola - replace: Melaleuca x arenicola - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mentha xpiperita - replace: Mentha x piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mentha xpiperita var. citrata - replace: Mentha x piperita var. citrata - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Mentha xpiperita var. piperita - replace: Mentha x piperita var. piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Merremia sp. B Kimberley Flora (B.J. Carter 533) - replace: Merremia sp. B Kimberley Flora (B.J.Carter 533) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Boxwood (K.R. Newbey 4200) - replace: Microcorys sp. Boxwood (K.R.Newbey 4200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Coomallo (L. Haegi 2677) - replace: Microcorys sp. Coomallo (L.Haegi 2677) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Forrestania (V. English 2004) - replace: Microcorys sp. Forrestiana (V.English 2004) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Mt Gibson (S. Patrick 2098) - replace: Microcorys sp. Mt Gibson (S.Patrick 2098) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Tarin Rock (E.J. Croxford 5251) - replace: Microcorys sp. Tarin Rock (E.J.Croxford 5251) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. stellate (A. Strid 21885) - replace: Microcorys sp. stellate (A.Strid 21885) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Micromyrtus racemosa var. Jingemarra - replace: Micromyrtus racemosa var. Jingemarra (R.J.Cranfield 5253a) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Micromyrtus triptycha subsp. elata - replace: Micromyrtus triptycha subsp. elata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Micromyrtus triptycha subsp. longiflora - replace: Micromyrtus triptycha subsp. longiflora MS - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Micromyrtus uniovula - replace: Micromyrtus uniovulum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia bursarioides - replace: Mirbelia bursarioides MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia cordifolia - replace: Mirbelia cordifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia magentea - replace: Mirbelia magentea MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Bursarioides (T.R. Lally 760) - replace: Mirbelia sp. Bursarioides (T.R.Lally 760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Carnarvon (J.S. Beard 6008) - replace: Mirbelia sp. Carnarvon (J.S.Beard 6008) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Denham (W.E. Blackall 556) - replace: Mirbelia sp. Denham (W.E.Blackall 556) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Helena & Aurora (B.J. Lepschi 2003) - replace: Mirbelia sp. Helena & Aurora (B.J.Lepschi 2003) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Kalbarri (M.D. Crisp 6261) - replace: Mirbelia sp. Kalbarri (M.D.Crisp 6261) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Magentea (T.E.H. Aplin 5976) - replace: Mirbelia sp. Magentea (T.E.H.Aplin 5976) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Mt Heywood (T.E.H. Aplin 4154) - replace: Mirbelia sp. Mt Heywood (T.E.H.Aplin 4154) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Ternata (M.D. Crisp & L.G. Cook MDC 9267) - replace: Mirbelia sp. Ternata (M.D.Crisp & L.G.Cook MDC 9267) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Zuytdorp (G.J. Keighery & N. Gibson 1688) - replace: Mirbelia sp. Zuytdorp (G.J.Keighery & N.Gibson 1688) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. hooked keel (M.D. Crisp 8519 & W. Keys) - replace: Mirbelia sp. hooked keel (M.D.Crisp 8519 & W.Keys) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mukia sp. A Kimberley Flora (K.F. Kenneally 7909) - replace: Mukia sp. A Kimberley Flora (K.F.Kenneally 7909) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mukia sp. D Flora of Australia (A.A. Mitchell PRP 1121) - replace: Mukia sp. D Flora of Australia (A.A.Mitchell PRP 1121) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Oldenlandia sp. Hamersley Station (A.A. Mitchell PRP 1479) - replace: Oldenlandia sp. Hamersley Station (A.A.Mitchell PRP 1479) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Olearia brachyglossa - replace: Olearia brachyglossa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Olearia dampieri - replace: Olearia dampieri MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Olearia dampieri subsp. eremicola - replace: Olearia dampieri subsp. eremicola MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Ornithogalum longebracteatum - replace: Ornithogalum longibracteatum - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Otion microphyllum - replace: Otion microphyllum MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Otion simplicifolium - replace: Otion simplicifolium MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Otion tortile - replace: Otion tortile MS - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-21) - taxonomic_resolution: species -- find: Pelargonium australe subsp. australe ms - replace: Pelargonium australe var. australe - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Pelargonium australe subsp. drummondii - replace: Pelargonium australe subsp. drummondii MS - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Pelargonium xasperum - replace: Pelargonium x asperum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pelargonium xdomesticum - replace: Pelargonium x domesticum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pentalepis sp. Mt House (E.M. Bennett 1877) - replace: Pentalepis sp. Mt House (E.M.Bennett 1877) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Peplidium sp. C Evol. Fl. Fauna Arid Aust. (N.T. Burbidge & A. Kanis 8158) - replace: Peplidium sp. C Evol. Fl. Fauna Arid Aust. (N.T.Burbidge & A.Kanis 8158) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Peplidium sp. E Evol. Fl. Fauna Arid Aust. (A.S. Weston 12768) - replace: Peplidium sp. E Evol. Fl. Fauna Arid Aust. (A.S.Weston 12768) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Petrophile squamata subsp. squamata - replace: Petrophile squamata subsp. squamata MS - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Petunia xhybrida - replace: Petunia x hybrida - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Mt Gibbs (G.F. Craig 6658) - replace: Phebalium sp. Mt Gibbs (G.F.Craig 6658) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Yerilgee Sandplain (J. Jackson 223) - replace: Phebalium sp. Yerilgee Sandplain (J.Jackson 223) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Philotheca sp. Latham (F. Keast L4B 043) - replace: Philotheca sp. Latham (F.Keast L4B 043) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Philotheca spicata subsp. Moore River National Park - replace: Philotheca spicata subsp. Moore River National Park (G. & D.Woodman Op - 47) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Phyllanthus sp. D Kimberley Flora (C.R. Dunlop 5302) - replace: Phyllanthus sp. D Kimberley Flora (C.R.Dunlop 5302) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pilostyles sp. Northern Sandplains (P. Armstrong s.n. PERTH 06590179) - replace: Pilostyles sp. Northern Sandplains (P.Armstrong s.n. PERTH 06590179) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pimelea sp. Tarin Rock (E.J. Croxford 2118) - replace: Pimelea sp. Tarin Rock (E.J.Croxford 2118) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Plantago sp. Hamersley (M.E. Trudgen 11207) - replace: Plantago sp. Hamersley (M.E.Trudgen 11207) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Plantago sp. Mt Magnet (A.S. George 6793) - replace: Plantago sp. Mt Magnet (A.S.George 6793) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platanus xhispanica - replace: Platanus x hispanica - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Eneabba (R. Hnatiuk 770001) - replace: Platysace sp. Eneabba (R.Hnatiuk 770001) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Kalbarri (D. & B. Bellairs 1383) - replace: Platysace sp. Kalbarri (D. & B.Bellairs 1383) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Kennedy (P.G. Wilson 8450) - replace: Platysace sp. Kennedy (P.G.Wilson 8450) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Stirling (J.M. Fox 88/262) - replace: Platysace sp. Stirling (J.M.Fox 88/262) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pluchea sp. B Kimberley Flora (K.F. Kenneally 9526A) - replace: Pluchea sp. B Kimberley Flora (K.F.Kenneally 9526A) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Podolepis sp. Carnarvon Range (D.J. Edinger Nats 33) - replace: Podolepis sp. Carnarvon Range (D.J.Edinger Nats 33) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Podolepis sp. Great Victoria Desert (A.S. George 8219) - replace: Podolepis sp. Great Victoria Desert (A.S.George 8219) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polycarpaea sp. A Kimberley Flora (K.F. Kenneally 8887) - replace: Polycarpaea sp. A Kimberley Flora (K.F.Kenneally 8887) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polygala sp. A Kimberley Flora (K.F. Kenneally 7752) - replace: Polygala sp. A Kimberley Flora (K.F.Kenneally 7752) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polygala sp. B Kimberley Flora (T.E.H. Aplin et al. 715) - replace: Polygala sp. B Kimberley Flora (T.E.H.Aplin et al. 715) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polymeria sp. A Kimberley Flora (T.E.H. Aplin et al. 418) - replace: Polymeria sp. A Kimberley Flora (T.E.H.Aplin et al. 418) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pomax sp. desert (A.S. George 11968) - replace: Pomax sp. desert (A.S.George 11968) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Poranthera sp. Kings Park (R.L. Barrett 2958) - replace: Poranthera sp. Kings Park (R.L.Barrett 2958) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Prosopis glandulosa x velutina - replace: Prosopis glandulosa x Prosopis velutina - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Pseudactinia sp. Bruce Rock (J. Buegge D36) - replace: Pseudactinia sp. Bruce Rock (J.Buegge D36) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pseudactinia sp. Bungalbin Hill (F.H. & M.P. Mollemans 3069) - replace: Pseudactinia sp. Bungalbin Hill (F.H. & M.P.Mollemans 3069) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterocaulon sp. A Kimberley Flora (B.J. Carter 599) - replace: Pterocaulon sp. A Kimberley Flora (B.J.Carter 599) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Cape Arid (G. Brockman GBB 263) - replace: Pterostylis sp. Cape Arid (G.Brockman GBB 263) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Cape Le Grand (I. Solomon 550) - replace: Pterostylis sp. Cape Le Grand (I.Solomon 550) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Helena River (G. Brockman GBB 340) - replace: Pterostylis sp. Helena River (G.Brockman GBB 340) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Karri forest (W. Jackson BJ270) - replace: Pterostylis sp. Karri forest (W.Jackson BJ270) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Northampton (S.D. Hopper 3349) - replace: Pterostylis sp. (Northampton) S.D.Hopper 3349 - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Ongerup (K.R. Newbey 4874) - replace: Pterostylis sp. Ongerup (K.R.Newbey 4874) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Slender Snail Orchid (G.J. Keighery 14516) - replace: Pterostylis sp. Slender Snail Orchid (G.J.Keighery 14516) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Southern Granites (W. Jackson BJ256) - replace: Pterostylis sp. Southern Granites (W.Jackson BJ256) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. broad petals (S.D. Hopper 4429) - replace: Pterostylis sp. broad petals (S.D.Hopper 4429) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. cauline leaves (N. Gibson & M.N. Lyons 1490) - replace: Pterostylis sp. cauline leaves (N.Gibson & M.N.Lyons 1490) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. clubbed snail orchid (R. Davis 8088) - replace: Pterostylis sp. clubbed snail orchid (R.Davis 8088) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. crinkled leaf (G.J. Keighery 13426) - replace: Pterostylis sp. crinkled leaf (G.J.Keighery 13426) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. dainty brown (N. Gibson & M. Lyons 3690) - replace: Pterostylis sp. dainty brown (N.Gibson & M.Lyons 3690) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. elegant snail orchid (G. Brockman GBB 1194) - replace: Pterostylis sp. elegant snail orchid (G.Brockman GBB 1194) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. exserted labellum (A.C. Beauglehole 12194) - replace: Pterostylis sp. exserted labellum (A.C.Beauglehole 12194) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. extended dorsal sepal (G. Paull 731) - replace: Pterostylis sp. extended dorsal sepal (G.Paull 731) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. fragile (S. Barrett 553) - replace: Pterostylis sp. fragile (S.Barrett 553) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. granite (W. Jackson BJ351) - replace: Pterostylis sp. granite (W.Jackson BJ351) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. inland (A.C. Beauglehole 11880) - replace: Pterostylis sp. inland (A.C.Beauglehole 11880) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. late flowering (W. Jackson BJ298) - replace: Pterostylis sp. late flowering (W.Jackson BJ298) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. limestone (B.J. Keighery & G.J. Keighery 65) - replace: Pterostylis sp. limestone (B.J.Keighery & G.J.Keighery 65) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. mid-west coast (G. Brockman GBB134) - replace: Pterostylis sp. mid-west coast (G.Brockman GBB134) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. miniature (J.R. Wheeler 3298) - replace: Pterostylis sp. miniature (J.R.Wheeler 3298) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. red flowered (W. Jackson BJ269) - replace: Pterostylis sp. red flowered (W.Jackson BJ269) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. robust (W. Jackson BJ294) - replace: Pterostylis sp. robust (W.Jackson BJ294) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. scooped sepals (G. Brockman GBB386) - replace: Pterostylis sp. scooped sepals (G.Brockman GBB386) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. short sepals (W. Jackson BJ259) - replace: Pterostylis sp. short sepals (W.Jackson BJ259) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. small stature (W. Jackson BJ303) - replace: Pterostylis sp. small stature (W.Jackson BJ303) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. striped sepal greenhood (G. Brockman GBB355) - replace: Pterostylis sp. striped sepal greenhood (G.Brockman GBB355) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. yellow eared (W. Jackson BJ359) - replace: Pterostylis sp. yellow eared (W.Jackson BJ359) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus humilis subsp. humilis - replace: Ptilotus humilis var. humilis - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Ptilotus humilis subsp. parviflorus - replace: Ptilotus humilis var. parviflorus - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Ptilotus sp. Beaufort River (G.J. Keighery 16554) - replace: Ptilotus sp. Beaufort River (G.J.Keighery 16554) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Burnerbinmah (S. Patrick 2787) - replace: Ptilotus sp. Burnerbinmah (S.Patrick 2787) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Mt Narryer (A.S. George 17484) - replace: Ptilotus sp. Mt Narryer (A.S.George 17484) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Northampton (R. Davis 10952) - replace: Ptilotus sp. Northampton (R.Davis 10952) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Porongurup (R. Davis 10805) - replace: Ptilotus sp. Porongurup (R.Davis 10805) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Puccinellia sp. Warren Road (M.N. Lyons 2710) - replace: Puccinellia sp. Warren Road (M.N.Lyons 2710) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Kundip (G.F. Craig 6008) - replace: Pultenaea sp. Kundip (G.F.Craig 6008) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (J.S. Beard 7827) - replace: Pultenaea sp. Mt Lesueur (J.S.Beard 7827) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (L.A. Orthia 86) - replace: Pultenaea sp. Mt Lesueur (L.A.Orthia 86) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. southern (L.A. Orthia 39) - replace: Pultenaea sp. southern (L.A.Orthia 39) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhagodia sp. Watheroo (R.J. Cranfield & P.J. Spencer 8183) - replace: Rhagodia sp. Watheroo (R.J.Cranfield & P.J.Spencer 8183) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhodanthe pollackii - replace: Rhodanthe polakii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhodanthe sp. Overlander (P.S. Short 2096) - replace: Rhodanthe sp. Overlander (P.S.Short 2096) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhynchospora sp. A Kimberley Flora (C.R. Dunlop 5329) - replace: Rhynchospora sp. A Kimberley Flora (C.R.Dunlop 5329) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhynchospora sp. B Kimberley Flora (A.S. Weston 12363) - replace: Rhynchospora sp. B Kimberley Flora (A.S.Weston 12363) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rosa chinensis x moschata - replace: Rosa chinensis x Rosa moschata - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Rosa chinensis x multiflora - replace: Rosa chinensis x Rosa multiflora - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Rubus loganobaccus - replace: Rubus loganubaccus - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rubus xloganobaccus - replace: Rubus x loganobaccus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Ruellia sp. A Kimberley Flora (K.F. Kenneally 9007) - replace: Ruellia sp. A Kimberley Flora (K.F.Kenneally 9007) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rulingia apella - replace: Rulingia apella MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rulingia sp. Trigwell Bridge (R. Smith s.n. 20.6.89) - replace: Rulingia sp. Trigwell Bridge (R.Smith s.n. 20.6.1989) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Rumex xjohannis-moorei - replace: Rumex x johannis-moorei - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Rumex xmuretii - replace: Rumex x muretii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xpratensis - replace: Rumex x pratensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xpseudopulcher - replace: Rumex x pseudopulcher - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xschultzei - replace: Rumex x schultzei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Salvinia xmolesta - replace: Salvinia x molesta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Samolus sp. Millstream (M.I.H. Brooker 2076) - replace: Samolus sp. Millstream (M.I.H.Brooker 2076) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Samolus sp. Shark Bay (M.E. Trudgen 7410) - replace: Samolus sp. Shark Bay (M.E.Trudgen 7410) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sarcocornia quinqueflora subsp. quinqueflora - replace: Salicornia quinqueflora subsp. quinqueflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Sauropus sp. Woolgorong (M. Officer s.n. 10/8/94) - replace: Sauropus sp. Woolgorong (M.Officer s.n. 10/8/94) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola humifusa de - replace: Scaevola humifusa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola repens de - replace: Scaevola repens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola repens de var. repens - replace: Scaevola repens var. repens - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Scaevola repens subsp. Northern Sandplains - replace: Scaevola repens subsp. Northern Sandplains (R.J.Cranfield & P.J.Spencer - 8445) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Scaevola repens var. angustifolia de - replace: Scaevola repens var. angustifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Scaevola sp. Hamersley Range basalts (S. van Leeuwen 3675) - replace: Scaevola sp. Hamersley Range basalts (S.van Leeuwen 3675) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola sp. Lake Cairlocup (K. Newbey 9834) - replace: Scaevola sp. Lake Cairlocup (K.Newbey 9834) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sesquispiculus - replace: Schoenus sesquispicula - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. A1 Boorabbin (K.L. Wilson 2581) - replace: Schoenus sp. A1 Boorabbin (K.L.Wilson 2581) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. A2 Kulin (B.G. Briggs 7939) - replace: Schoenus sp. A2 Kulin (B.G.Briggs 7939) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. A3 Ciliate Sheaths (K.R. Newbey 9402) - replace: Schoenus sp. A3 Ciliate Sheaths (K.R.Newbey 9402) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Beaufort (G.J. Keighery 6291) - replace: Schoenus sp. Beaufort (G.J. Keighery 6291) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Schoenus sp. Bullsbrook (J.J. Alford 915) - replace: Schoenus sp. Bullsbrook (J.J.Alford 915) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Cape Riche Cushion (G.J. Keighery 9922) - replace: Schoenus sp. Cape Riche Cushion (G.J.Keighery 9922) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Eneabba (F. Obbens & C. Godden I154) - replace: Schoenus sp. Eneabba (F.Obbens & C.Godden I154) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. G Broad Sheath (K.L. Wilson 2633) - replace: Schoenus sp. G Broad Sheath (K.L.Wilson 2633) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Grassy (E. Gude & J. Harvey 250) - replace: Schoenus sp. Grassy (E.Gude & J.Harvey 250) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Grey Rhizome (K.L. Wilson 2922) - replace: Schoenus sp. Grey Rhizome (K.L.Wilson 2922) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Jindong (R.D. Royce 2485) - replace: Schoenus sp. Jindong (R.D.Royce 2485) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Kalbarri (K.R. Newbey 9352) - replace: Schoenus sp. Kalbarri (K.R.Newbey 9352) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Mt Barker (G.J. Keighery 9679) - replace: Schoenus sp. Mt Barker (G.J.Keighery 9679) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Murchison (K.L. Wilson 2647) - replace: Schoenus sp. Murchison (K.L.Wilson 2647) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Stirling (G.J. Keighery 3427) - replace: Schoenus sp. Stirling (G.J.Keighery 3427) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Toodyay (G.J. Keighery & N. Gibson 2918) - replace: Schoenus sp. Toodyay (G.J.Keighery & N.Gibson 2918) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Waroona (G.J. Keighery 12235) - replace: Schoenus sp. Waroona (G.J.Keighery 12235) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. smooth culms (K.R. Newbey 7823) - replace: Schoenus sp. smooth culms (Newbey 7823) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Ajana (T.A. Halliday 137) - replace: Scholtzia sp. Ajana (T.A.Halliday 137) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Binnu (M.E. Trudgen 2218) - replace: Scholtzia sp. Binnu (M.E.Trudgen 2218) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Binnu East Road (M.E. Trudgen 12013) - replace: Scholtzia sp. Binnu East Road (M.E.Trudgen 12013) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. East Yuna (A.C. Burns 6) - replace: Scholtzia sp. East Yuna (A.C.Burns 6) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Eneabba (S. Maley 8) - replace: Scholtzia sp. Eneabba (S.Maley 8) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Eradu (R.D. Royce 8016) - replace: Scholtzia sp. Eradu (R.D.Royce 8016) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Eurardy (J.S. Beard 6886) - replace: Scholtzia sp. Eurardy (J.S.Beard 6886) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Folly Hill (M.E. Trudgen 12097) - replace: Scholtzia sp. Folly Hill (M.E.Trudgen 12097) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Galena (W.E. Blackall 4728) - replace: Scholtzia sp. Galena (W.E.Blackall 4728) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Geraldton (F. Lullfitz L 3216) - replace: Scholtzia sp. Geraldton (F.Lullfitz L 3216) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Gunyidi (J.D. Briggs 1721) - replace: Scholtzia sp. Gunyidi (J.D.Briggs 1721) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Kalbarri (N. Hoyle 623) - replace: Scholtzia sp. Kalbarri (N.Hoyle 623) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Kojarena (A.M. Ashby 1904) - replace: Scholtzia sp. Kojarena (A.M.Ashby 1904) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Murchison River (A.S. George 7098) - replace: Scholtzia sp. Murchison River (A.S.George 7908) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Northampton (A. Strid 20714) - replace: Scholtzia sp. Northampton (A.Strid 20174) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Prowaka Springs (R.J. Cranfield & P. Spencer 8083) - replace: Scholtzia sp. Prowaka Springs (R.J.Cranfield & P.Spencer RJC 8083) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Red Bluff (A. Gunness 2373) - replace: Scholtzia sp. Red Bluff (A.Gunness 2373) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Ross Graham Lookout (S. Maley 6) - replace: Scholtzia sp. Ross Graham Lookout (S.Maley 6) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Shark Bay (M.E. Trudgen 7429) - replace: Scholtzia sp. Shark Bay (M.E.Trudgen 7429) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S. Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S.J.Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Whelarra (M.E. Trudgen 12018) - replace: Scholtzia sp. Whelarra (M.E.Trudgen 12018) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Yandanooka (R. Soullier 646) - replace: Scholtzia sp. Yandanooka (R.Soullier 646) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scleria sp. B Kimberley Flora (C.R. Dunlop 5409) - replace: Scleria sp. B Kimberley Flora (C.R.Dunlop 5409) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scleria sp. C Kimberley Flora (K.F. Kenneally 4873) - replace: Scleria sp. C Kimberley Flora (K.F.Kenneally 4873) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sclerolaena xgeorgei - replace: Sclerolaena x georgei - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Senna artemisioides subsp. petiolaris - replace: Senna artemisioides subsp. x petiolaris - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xartemisioides - replace: Senna artemisioides subsp. x artemisioides - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xcoriacea - replace: Senna artemisioides subsp. x coriacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xsturtii - replace: Senna artemisioides subsp. x sturtii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna glutinosa subsp. xluerssenii - replace: Senna glutinosa subsp. x luerssenii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna sp. Austin (A. Strid 20210) - replace: Senna sp. Austin (A.Strid 20210) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Billabong (J.D. Alonzo 721) - replace: Senna sp. Billabong (J.D.Alonzo 721) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Karijini (M.E. Trudgen 10392) - replace: Senna sp. Karijini (M.E.Trudgen 10392) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Meekatharra (E. Bailey 1-26) - replace: Senna sp. Meekatharra (E.Bailey 1-26) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Tamala (M.E. Trudgen 7334A) - replace: Senna sp. Tamala (M.E.Trudgen 7334A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. A Kimberley Flora (P.A. Fryxell & L.A. Craven 3900) - replace: Sida sp. A Kimberley Flora (P.A.Fryxell & L.A.Craven 3900) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Articulation below (A.A. Mitchell PRP 1605) - replace: Sida sp. Articulation below (A.A.Mitchell PRP1605) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Barlee Range (S. van Leeuwen 1642) - replace: Sida sp. Barlee Range (S.van Leeuwen 1642) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Bungle Bungles (M.I. Blackwell 219) - replace: Sida sp. Bungle Bungles (M.I.Blackwell 219) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. C Kimberley Flora (T.E.H. Aplin 4982) - replace: Sida sp. C Kimberley Flora (T.E.H.Aplin 4982) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Carnarvon (P.S. Short 2492) - replace: Sida sp. Carnarvon (P.S.Short 2492) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Excedentifolia (J.L. Egan 1925) - replace: Sida sp. Excedentifolia (J.L.Egan 1925) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces glabrous (H.N. Foote 32) - replace: Sida sp. golden calyces glabrous (H.N.Foote 32) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces pubescent (G.J. Leach 1966) - replace: Sida sp. Golden calyces pubescent (G.J.Leach 1966) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Hamersley Range (K. Newbey 10692) - replace: Sida sp. Hamersley Range (K.Newbey 10692) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. L (A.M. Ashby 4202) - replace: Sida sp. L (A.M.Ashby 4202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Pilbara (A.A. Mitchell PRP 1543) - replace: Sida sp. Pilbara (A.A.Mitchell PRP1543) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Pindar (A. Mitchell 3585) - replace: Sida sp. Pindar (A.A.Mitchell 3585) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Rabbit Flat (B.J. Carter 626) - replace: Sida sp. Rabbit Flat (B.J.Carter 626) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Shovelanna Hill (S. van Leeuwen 3842) - replace: Sida sp. Shovelanna Hill (S.van Leeuwen 3842) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Supplejack Station (T.S. Henshall 2345) - replace: Sida sp. Supplejack Station (T.S.Henshall 2345) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Watarrka (D.E. Albrecht 8672) - replace: Sida sp. Watarrka (D.E.Albrecht 8672) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Western sand dunes (P.K. Latz 11980) - replace: Sida sp. Western sand dunes (P.K.Latz 11980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. dark green fruits (S. van Leeuwen 2260) - replace: Sida sp. dark green fruits (S.van Leeuwen 2260) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. sand dunes (A.A. Mitchell PRP1208) - replace: Sida sp. sand dunes (A.A.Mitchell PRP1208) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/1990) - replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/90) - replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. tiny glabrous fruit (A.A. Mitchell PRP1152) - replace: Sida sp. tiny glabrous fruit (A.A.Mitchell PRP1152) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. verrucose glands (F.H. Mollemans 2423) - replace: Sida sp. verrucose glands (F.H.Mollemans 2423) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Solanum sp. Boomerang Bay (K.F. Kenneally 10021) - replace: Solanum sp. Boomerang Bay (K.F.Kenneally 10021) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sorghum xalmum - replace: Sorghum x almum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Spergularia sp. 5 Leeman (G.J. Keighery & J.J. Alford 488) - replace: Spergularia sp. 5 Leeman (G.J.Keighery & J.J.Alford 488) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sphenotoma sp. Stirling Range (P.G. Wilson 4235) - replace: Sphenotoma sp. Stirling Range (P.G.Wilson 4235) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Spinifex xalterniflorus - replace: Spinifex x alterniflorus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stackhousia sp. swollen gynophore (W.R. Barker 2041) - replace: Stackhousia sp. Swollen gynophore (W.R.Barker 2041) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stemodia sp. Battle Hill (A.L. Payne 1006) - replace: Stemodia sp. Battle Hill (A.L.Payne 1006) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stemodia sp. Onslow (A.A. Mitchell 76/148) - replace: Stemodia sp. Onslow (A.A.Mitchell 76/148) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium egralliforme - replace: Stylidium egralliforme MS - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Bindoon (K.F. Kenneally 11405) - replace: Stylidium sp. Bindoon (K.F.Kenneally 11405) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Boulder Rock (A.H. Burbidge 2536) - replace: Stylidium sp. Boulder Rock (A.H.Burbidge 2536) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Dewars Pool (K.F. Kenneally 11400) - replace: Stylidium sp. Dewars Pool (K.F.Kenneally 11400) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Kalbarri (A. Carr 145) - replace: Stylidium sp. Kalbarri (A.Carr 145) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Mt Barker (E.J. Croxford 1906) - replace: Stylidium sp. Mt Barker (E.J.Croxford 1906) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Swainsona sp. Hamersley Station (A.A. Mitchell 196) - replace: Swainsona sp. Hamersley Station (A.A.Mitchell 196) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Swainsona sp. Shark Bay (M.E. Trudgen 7588) - replace: Swainsona sp. Shark Bay (M.E.Trudgen 7588) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Fairbridge Farm (D. Papenfus 696) - replace: Synaphea sp. Fairbridge Farm (D.Papenfus 696) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Jilakin Flat Rocks Rd (R. Butcher et. al RB200) - replace: Synaphea sp. Jilakin Flat Rocks Rd (R.Butcher et al. RB200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup (D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup(D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Pinjarra (R. Davis 6578) - replace: Synaphea sp. Pinjarra (R.Davis 6578) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Redgate Road (J. Scott 16) - replace: Synaphea sp. Redgate Road (J.Scott 16) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tecticornia mellaria - replace: Tecticornia mellarium - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tecticornia sp. Gunyidi (M.N. Lyons 2607) - replace: Tecticornia sp. Gunyidi (M.N.Lyons 2607) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tecticornia sp. Roy Hill (H. Pringle 62) - replace: Tecticornia sp. Roy Hill (H.Pringle 62) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Tephrosia rosea var. Napier Range - replace: Tephrosia rosea var. Napier Range (C.R.Dunlop 7760 & B.K.Simon) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Tephrosia rosea var. glabrior - replace: Tephrosia rosea var. glabrior MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Tephrosia rosea var. venulosa - replace: Tephrosia rosea var. venulosa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Tephrosia sp. B Kimberley Flora (C.A. Gardner 7300) - replace: Tephrosia sp. B Kimberley Flora (C.A.Gardner 7300) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Bungaroo Creek (M.E. Trudgen 11601) - replace: Tephrosia sp. Bungaroo Creek (M.E.Trudgen 11601) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. C Kimberley Flora (K.F. Kenneally 5599) - replace: Tephrosia sp. C Kimberley Flora (K.F.Kenneally 5599) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Carnarvon (J.H. Ross 2681) - replace: Tephrosia sp. Carnarvon (J.H.Ross 2681) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Cathedral Gorge (F.H. Mollemans 2420) - replace: Tephrosia sp. Cathedral Gorge (F.H.Mollemans 2420) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Central (P.K. Latz 17037) - replace: Tephrosia sp. Central (P.K.Latz 17037) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. D Kimberley Flora (R.D. Royce 1848) - replace: Tephrosia sp. D Kimberley Flora (R.D.Royce 1848) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Dunes (J.R. Maconochie 938) - replace: Tephrosia sp. Dunes (J.R.Maconochie 938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Durack River (C.A. Gardner 9938) - replace: Tephrosia sp. Durack River (C.A.Gardner 9938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. E Kimberley Flora (C.A. Gardner 9937) - replace: Tephrosia sp. E Kimberley Flora (C.A.Gardner 9937) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. F Kimberley Flora (B.R. Maslin 5139) - replace: Tephrosia sp. F Kimberley Flora (B.R.Maslin 5139) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. G Kimberley Flora (G.J. Keighery 4828) - replace: Tephrosia sp. G Kimberley Flora (G.J.Keighery 4828) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Kennedy Range (J.S. Beard 4392) - replace: Tephrosia sp. Kennedy Range (J.S.Beard 4392) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Kununurra (T. Handasyde TH00 250) - replace: Tephrosia sp. Kununurra (T.Handesyde TH00 250) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Magazine Hill (P. Jones 365) - replace: Tephrosia sp. Magazine Hill (P.Jones 365) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Mistake Creek (A.C. Beauglehole 54424) - replace: Tephrosia sp. Mistake Creek (A.C.Beauglehole 54424) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. NW Eremaean (S. van Leeuwen et al. PBS 0356) - replace: Tephrosia sp. NW Eremaean (S.van Leeuwen et al. PBS 0356) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Newman (A.A. Mitchell PRP 29) - replace: Tephrosia sp. Newman (A.A.Mitchell PRP 29) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Northern (K.F. Kenneally 11950) - replace: Tephrosia sp. Northern (K.F.Kenneally 11950) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Onslow (K.R. Newbey 10571) - replace: Tephrosia sp. Onslow (K.R.Newbey 10571) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Pentecost River (I.D. Cowie 4168) - replace: Tephrosia sp. Pentecost River (I.D.Cowie 4168) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Saw Ranges (D. Kabay s.n. PERTH 06720544) - replace: Tephrosia sp. Saw Ranges (D.Kabay s.n. PERTH 06720544) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Willowra (G.M. Chippendale 4809) - replace: Tephrosia sp. Willowra (G.M.Chippendale 4809) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. clay soils (S. van Leeuwen et al. PBS 0273) - replace: Tephrosia sp. Clay soils (S.van Leeuwen et al. PBS 0273) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. deserts (J.R. Maconochie 1403) - replace: Tephrosia sp. deserts (J.R.Maconochie 1403) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. sparse pinnae (C.R. Michel 2202) - replace: Tephrosia sp. Sparse pinnae (C.R.Michell 2202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tetratheca sp. Granite (S. Patrick SP1224) - replace: Tetratheca sp. Granite (S.Patrick SP1224) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tetratheca sp. Kent River (B.G. Hammersley 1791) - replace: Tetratheca sp. Kent River (B.G.Hammersley 1791) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tetratheca sp. Mt Solus (F. Obbens 307/98) - replace: Tetratheca sp. Mt Solus (F.Obbens 307/98) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. Balladonia (K.R. Newbey 7380) - replace: Teucrium sp. Balladonia (K.R.Newbey 7380) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. Norseman (T.E.H. Aplin 1851) - replace: Teucrium sp. Norseman (T.E.H.Aplin 1851) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. Sturt Creek (A.A. Mitchell 5536) - replace: Teucrium sp. Sturt Creek (A.A.Mitchell 5536) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. dwarf (R. Davis 8813) - replace: Teucrium sp. dwarf (R.Davis 8813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thelymitra sp. Brookton (A.S. George 11631) - replace: Thelymitra sp. Brookton (A.S.George 11631) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thelymitra sp. Esperance (N.S. Lander 1080) - replace: Thelymitra sp. Esperance (N.S.Lander 1080) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thelymitra sp. Slender Sun Orchid (A.R. Annels 2884) - replace: Thelymitra sp. Slender Sun Orchid (A.R.Annels 2884) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Themeda sp. Hamersley Station (M.E. Trudgen 11431) - replace: Themeda sp. Hamersley Station (M.E.Trudgen 11431) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Themeda sp. Mt Barricade (M.E. Trudgen 2471) - replace: Themeda sp. Mt Barricade (M.E.Trudgen 2471) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Arthur River (H.F. & M. Broadbent 1409) - replace: Thomasia sp. Arthur River (H.F. & M.Broadbent 1409) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Big Brook (M. Koch 2373) - replace: Thomasia sp. Big Brook (M.Koch 2373) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Gingin (F. & J. Hort 1511) - replace: Thomasia sp. Gingin (F. & J.Hort 1511) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Green Hill (S. Paust 1322) - replace: Thomasia sp. Green Hill (S.Paust 1322) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Lesueur (M. Hislop 4217) - replace: Thomasia sp. Lesueur (M.Hislop 4217) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Merredin (M.B. Mills 11) - replace: Thomasia sp. Merredin (M.B.Mills 11) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Salmon Gums (C.A. Gardner s.n. PERTH 02708639) - replace: Thomasia sp. Salmon Gums (C.A.Gardner s.n. PERTH 02708639) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Toolbrunup (G.J. Keighery 9895) - replace: Thomasia sp. Toolbrunup (G.J.Keighery 9895) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Vasse (C. Wilkins & K. Shepherd CW 581) - replace: Thomasia sp. Vasse (C.Wilkins & K.Shepherd CW581) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia xformosa - replace: Thomasia x formosa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene glaucosa - replace: Thryptomene glaucosa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Carrarang (M.E. Trudgen 7420) - replace: Thryptomene sp. Carrarang (M.E.Trudgen 7420) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Eagle Gorge (A.G. Gunness 2360) - replace: Thryptomene sp. Eagle Gorge (A.G.Gunness 2360) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. East Yuna (J.W. Green 4639) - replace: Thryptomene sp. East Yuna (J.W.Green 4639) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Eneabba (R.J. Cranfield 8433) - replace: Thryptomene sp. Eneabba (R.J.Cranfield 8433) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Eurardy (D. & B. Bellairs 1649) - replace: Thryptomene sp. Eurardy (D. & B.Bellairs 1649) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Geraldton (H. Demarz 5145) - replace: Thryptomene sp. Geraldton (H.Demarz 5145) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Lancelin (M.E. Trudgen 14000) - replace: Thryptomene sp. Lancelin (M.E.Trudgen 14000) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Moresby Range (A.S. George 14873) - replace: Thryptomene sp. Moresby Range (A.S.George 14873) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Steep Point (M.E. Trudgen 7421) - replace: Thryptomene sp. Steep Point (M.E.Trudgen 7421) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Tamala (M.E. Trudgen 7384) - replace: Thryptomene sp. Tamala (M.E.Trudgen 7384) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Yuna Reserve (A.C. Burns 100) - replace: Thryptomene sp. Yuna Reserve (A.C.Burns 100) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Badgingarra (E.A. Griffin 2511) - replace: Thysanotus sp. Badgingarra (E.A.Griffin 2511) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Desert East of Newman (R.P. Hart 964) - replace: Thysanotus sp. Desert East of Newman (R.P.Hart 964) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Eremaean (S. van Leeuwen 1067) - replace: Thysanotus sp. Eremaean (S.van Leeuwen 1067) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Great Victoria Desert (A.S. George 8406) - replace: Thysanotus sp. Great Victoria Desert (A.S.George 8406) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Kalbarri (D. & B. Bellairs 1523 A) - replace: Thysanotus sp. Kalbarri (D. & B.Bellairs 1523 A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Twining Wheatbelt (N.H. Brittan 81/29) - replace: Thysanotus sp. Twining Wheatbelt (N.H.Brittan 81/29) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Trianthema oxycalyptra var. oxycalyptra - replace: Trianthema oxycalyptrum var. oxycalyptrum - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: variety -- find: Tribonanthes sp. Lake Muir (G.J. Keighery & N. Gibson 2134) - replace: Tribonanthes sp. Lake Muir (G.J.Keighery & N.Gibson 2134) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulopis sp. Koolan Island (K.F. Kenneally 8278) - replace: Tribulopis sp. Koolan Island (K.F.Kenneally 8728) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulopis sp. Mitchell Plateau (K.F. Kenneally 7935) - replace: Tribulopis sp. Mitchell Plateau (K.F.Kenneally 7935) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulus sp. long-styled eichlerianus (A.S. George 10666) - replace: Tribulus sp. long-styled eichlerianus (A.S.George 10666) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulus sp. saline flats (P.K. Latz 4530) - replace: Tribulus sp. saline flats (P.K.Latz 4530) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Trichanthodium exile - replace: Trichanthodium exilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Trichocline sp. Treeton (B.J. Keighery & N. Gibson 564) - replace: Trichocline sp. Treeton (B.J.Keighery & N.Gibson 564) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Eneabba (E.A. Griffin 1200) - replace: Tricoryne sp. Eneabba (E.A.Griffin 1200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Geraldton (G.J. Keighery 10461) - replace: Tricoryne sp. Geraldton (G.J.Keighery 10461) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Kimberley (K.F. Kenneally 4857) - replace: Tricoryne sp. Kimberley (K.F.Kenneally 4857) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Morawa (G.J. Keighery & N. Gibson 6759) - replace: Tricoryne sp. Morawa (G.J.Keighery & N.Gibson 6759) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Mullewa (G.J. Keighery 12080) - replace: Tricoryne sp. Mullewa (G.J.Keighery 12080) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. South Coast (T.E.H. Aplin 2653) - replace: Tricoryne sp. South Coast (T.E.H.Aplin 2653) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Wongan Hills (B.H. Smith 794) - replace: Tricoryne sp. Wongan Hills (B.H.Smith 794) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triglochin sp. A Flora of Australia (G.J. Keighery 2477) - replace: Triglochin sp. A Flora of Australia (G.J.Keighery 2477) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triglochin sp. B Flora of Australia (P.G. Wilson 4294) - replace: Triglochin sp. B Flora of Australia (P.G.Wilson 4294) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triglochin sp. C Flora of Australia (P.G. Wilson 8811) - replace: Triglochin sp. C Flora of Australia (P.G.Wilson 8811) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triodia sp. Mt Ella (M.E. Trudgen 12739) - replace: Triodia sp. Mt Ella (M.E.Trudgen 12739) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triumfetta sp. Adolphus Island (K.F. Kenneally 11898) - replace: Triumfetta sp. Adolphus Island (KF.Kenneally 11898) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triumfetta sp. Mt Bomford (M.D. Barrett MDB 1001) - replace: Triumfetta sp. Mt Bomford (M.D.Barrett MDB 1001) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Typhonium sp. Kununurra (A.N. Start ANS 1467) - replace: Typhonium sp. Kununurra (A.N.Start ANS 1467) +taxonomic_updates: +- find: Canna xgeneralis + replace: Canna x generalis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Urodon sp. Galena (G.J. Keighery 14733) - replace: Urodon sp. Galena (G.L.Keighery 14733) +- find: Crocosmia xcrocosmiiflora + replace: Crocosmia x crocosmiiflora reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Urodon sp. Narkal (B.H. Smith 1440) - replace: Urodon sp. Narkal (B.H.Smith 1440) +- find: Drummondita rubroviridis + replace: Drummondita rubriviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Verticordia serrata var. Udumung - replace: Verticordia serrata var. Udumung (D.Hunter & B.Yarran 941006) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Verticordia xeurardyensis - replace: Verticordia x eurardyensis +- find: Echinochloa crusgalli + replace: Echinochloa crus-galli reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Vigna sp. Hamersley Clay (A.A. Mitchell PRP 113) - replace: Vigna sp. Hamersley Clay (A.A.Mitchell PRP 113) +- find: Erythrina xsykesii + replace: Erythrina x sykesii reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Vigna sp. northern pubescent (A.A. Mitchell 3667) - replace: Vigna sp. northern pubescent (A.A.Mitchell 3667) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) +- find: Freesia alba x leichtlinii + replace: Freesia alba x Freesia leichtlinii + reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Vittadinia sp. A Kimberley Flora (R.J. Cranfield 6527) - replace: Vittadinia sp. A Kimberley Flora (R.J.Cranfield 6527) +- find: Ptilotus sp. Beaufort River (G.J. Keighery 16554) + replace: Ptilotus sp. Beaufort River (G.J.Keighery 16554) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Wahlenbergia preissii de - replace: Wahlenbergia preissii +- find: Ptilotus sp. Mt Narryer (A.S. George 17484) + replace: Ptilotus sp. Mt Narryer (A.S.George 17484) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Wedelia sp. Hamersley (A.S. Weston 8444) - replace: Wedelia sp. Hamersley (A.S.Weston 8444) +- find: Ptilotus sp. Northampton (R. Davis 10952) + replace: Ptilotus sp. Northampton (R.Davis 10952) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Wurmbea sp. Cranbrook (A.R. Annels 3819) - replace: Wurmbea sp. Cranbrook (A.R.Annels 3819) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Wurmbea sp. Great Victoria Desert (G.J. Keighery 7501) - replace: Wurmbea sp. Great Victoria Desert (G.J.Keighery 7501) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Xanthosia sp. Dardanup (B.J. Keighery & N. Gibson 174) - replace: Xanthosia sp. Dardanup (B.J.Keighery & N.Gibson 174) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Xyris atrovirida - replace: Xyris atroviridis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Zornia sp. West Kimberley (C.A. Gardner 9942) - replace: Zornia sp. West Kimberley (C.A.Gardner 9942) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) +- find: Rubus xloganobaccus + replace: Rubus x loganobaccus + reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species exclude_observations: - variable: taxon_name find: Codium duthieae, Caulerpa scalpelliformis, Asparagopsis taxiformis reason: kelp, algae -questions: .na +questions: .na diff --git a/data/WAH_2022_2/metadata.yml b/data/WAH_2022_2/metadata.yml index b360b178f..8651679c7 100644 --- a/data/WAH_2022_2/metadata.yml +++ b/data/WAH_2022_2/metadata.yml @@ -56,7 +56,7 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: no - custom_R_code: ' + custom_R_code: ' data %>% filter(str_detect(taxon_name, " ")) %>% group_by(taxon_name) %>% @@ -182,26 +182,10 @@ taxonomic_updates: replace: Abutilon sp. Cape Range (A.S.George 1312) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Abutilon sp. Dioicum (A.A. Mitchell PRP 1618) - replace: Abutilon sp. Dioicum (A.A.Mitchell PRP 1618) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Abutilon sp. Hamelin (A.M. Ashby 2196) replace: Abutilon sp. Hamelin (A.M.Ashby 2196) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Onslow (F. Smith s.n. 10/9/61) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Pilbara (W.R. Barker 2025) - replace: Abutilon sp. Pilbara (W.R.Barker 2025) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Abutilon sp. Quobba (H. Demarz 3858) replace: Abutilon sp. Quobba (H.Demarz 3858) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -239,11 +223,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: variety -- find: Acacia monticola x trachycarpa - replace: Acacia monticola x Acacia trachycarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Acacia monticola x trachycarpa replace: Acacia monticola x Acacia trachycarpa reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -258,11 +237,6 @@ taxonomic_updates: 882) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: variety -- find: Acacia saligna subsp. saligna - replace: Acacia saligna - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Acacia saligna subsp. saligna ms replace: Acacia saligna reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -280,18 +254,10 @@ taxonomic_updates: replace: Acacia sp. Bungalbin Hill (J.J.Alford 1119) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia sp. Cadoux (B.R.Maslin 5786) - replace: Acacia sp. Cadoux (B.R.Maslin 5786) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Acacia sp. Cadoux (B.R. Maslin 5786) replace: Acacia sp. Cadoux (B.R.Maslin 5786) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia sp. Cape Arid (A.S.Weston 8164) - replace: Acacia sp. Cape Arid (A.S.Weston 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Acacia sp. Cape Arid (A.S. Weston 8164) replace: Acacia sp. Cape Arid (A.S.Weston 8164) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -480,11 +446,6 @@ taxonomic_updates: replace: Acacia sp. Small seed (B.R.Maslin 7830) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia trachycarpa x tumida var. pilbarensis - replace: Acacia trachycarpa x Acacia tumida var. pilbarensis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Acacia trachycarpa x tumida var. pilbarensis replace: Acacia trachycarpa x Acacia tumida var. pilbarensis reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -517,11 +478,6 @@ taxonomic_updates: replace: Actinotus sp. Walpole (J.R.Wheeler 3786) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Adenanthos barbiger subsp. barbiger - replace: Adenanthos barbiger - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Adenanthos barbiger subsp. barbiger ms replace: Adenanthos barbiger reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -547,11 +503,6 @@ taxonomic_updates: replace: Alyogyne coronopifolia MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Alyogyne huegelii var. huegelii - replace: Alyogyne huegelii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Alyogyne huegelii var. huegelii ms replace: Alyogyne huegelii reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -566,30 +517,6 @@ taxonomic_updates: replace: Alyogyne pyrrhophila MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Alyogyne sp. Geraldton (R. Davis 3487) - replace: Alyogyne sp. Geraldton (R.Davis 3487) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Great Victoria Desert (D.J. Edinger 6212) - replace: Alyogyne sp. Great Victoria Desert (D.J.Edinger 6212) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hutt River (B.J. Lepschi & T.R. Lally 2310) - replace: Alyogyne sp. Hutt River (B.J.Lepschi & T.R.Lally 2310) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S. Durell GD 127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S.Durrell GD127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Rockingham (G.J. Keighery 14463) - replace: Alyogyne sp. Rockingham (G.J.Keighery 14463) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Alyogyne wrayae replace: Alyogyne wrayae MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -656,14 +583,6 @@ taxonomic_updates: replace: Anthotium sp. Peaceful Bay (J.R.Wheeler 3772 & S.J.Patrick) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Aotus sp. Cunderdin (B.J. Lepschi et al. 3587) - replace: Aotus sp. Cunderdin (B.J.Lepschi et al. 3587) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Aotus sp. Dundas (M.A. Burgman 2835) - replace: Aotus sp. Dundas (M.A.Burgman 2835) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Apium prostratum subsp. prostratum var. filiforme replace: Apium prostratum subsp. prostratum reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -755,11 +674,6 @@ taxonomic_updates: replace: Atriplex sp. De Grey (A.A.Mitchell PRP1940) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Austrodolichos errabundus var. errabundus - replace: Austrodolichos errabundus - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Austrodolichos errabundus var. errabundus ms replace: Austrodolichos errabundus reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -864,11 +778,6 @@ taxonomic_updates: replace: Baeckea sp. Hatter Hill (K.R.Newbey 3284) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Helena & Aurora Range (G.J.Keighery 4424) - replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Helena and Aurora Range (G.J. Keighery 4424) replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -953,10 +862,6 @@ taxonomic_updates: replace: Baeckea sp. Parker Range (M.Hislop & F.Hort MH 2968) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Payne's Find (S.Patrick 1095) - replace: Baeckea sp. Paynes Find (S.Patrick 1095) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Paynes Find (S. Patrick 1095) replace: Baeckea sp. Paynes Find (S.Patrick 1095) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -977,19 +882,11 @@ taxonomic_updates: replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Sandstone (C.A.Gardner s.n., 26 Oct. 1963) - replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Sheoaks Rocks (M.E. Trudgen MET 5452) replace: Baeckea sp. Sheoaks Rocks (M.E.Trudgen MET 5452) reason: Fuzzy match of taxon name to an APNI-listed canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Baeckea sp. Sheoaks Rocks (M.E. Trudgen MET5452) - replace: Baeckea sp. Sheoaks Rocks (M.E.Trudgen MET5452) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-22) - taxonomic_resolution: species - find: Baeckea sp. Stockton Road (M.E. Trudgen MET22077 & B. Rye) replace: Baeckea sp. Stockton Road (M.E.Trudgen MET22077 & B.Rye) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1048,24 +945,10 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: subspecies -- find: Banksia sp. Boyup Brook (L.W. Sage LWS 2366) - replace: Banksia sp. Boyup Brook (L.W.Sage LWS 2366) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Baumea preissii subsp. laxa replace: Baumea preissii subsp. laxa MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Baumea preissii subsp. preissii - replace: Baumea preissii - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Baumea preissii subsp. preissii - replace: Baumea preissii - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Baumea preissii subsp. preissii ms replace: Baumea preissii reason: Exact match of the first two words of the taxon name to an APC-known canonical @@ -1100,10 +983,6 @@ taxonomic_updates: replace: Boronia crenulata var. angustifolia reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: variety -- find: Boronia sp. Leeuwin (J. Scott 235) - replace: Boronia sp. Leeuwin (J.Scott 235) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Boronia sp. Location 4264 (R. Turner s.n.) replace: Boronia sp. Location 4264 (R.Turner s.n., 23 Sept. 1999) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -1113,18 +992,10 @@ taxonomic_updates: replace: Borya sp. Wheatbelt (A.S.George 16470) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Bossiaea sp. Bremer (K. Newbey 2980) - replace: Bossiaea sp. Bremer (K.Newbey 2980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Bossiaea sp. Frankland (E.M. Sandiford EMS 896) replace: Bossiaea sp. Frankland (E.M.Sandiford EMS 896) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Bossiaea sp. Jackson Range (G. Cockerton & S. McNee LCS 13614) - replace: Bossiaea sp. Jackson Range (G.Cockerton & S.McNee LCS 13614) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Bossiaea sp. Waroona (B.J. Keighery & N. Gibson 229) replace: Bossiaea sp. Waroona (B.J.Keighery & N.Gibson 229) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) @@ -1271,10 +1142,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Calectasia grandiflora subsp. grandiflora - replace: Calectasia grandiflora - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species - find: Calectasia grandiflora subsp. grandiflora ms replace: Calectasia grandiflora reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -1395,21 +1262,11 @@ taxonomic_updates: reason: Exact match of the first two words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: species -- find: Chamelaucium forrestii subsp. forrestii - replace: Chamelaucium forrestii MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Chamelaucium forrestii subsp. forrestii ms replace: Chamelaucium forrestii MS reason: Exact match of the first two words of the taxon name to an APC-known canonical name (2023-11-02) taxonomic_resolution: species -- find: Chamelaucium pauciflorum subsp. pauciflorum - replace: Chamelaucium pauciflorum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Chamelaucium pauciflorum subsp. pauciflorum ms replace: Chamelaucium pauciflorum reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -1456,18 +1313,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Corchorus sp. Fitzroy Crossing (A.J. Ewart s.n. PERTH 01526790) - replace: Corchorus sp. Fitzroy Crossing (A.J.Ewart s.n. PERTH 01526790) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Hamersley Range (S. van Leeuwen 3586) - replace: Corchorus sp. Hamersley Range (S.van Leeuwen 3586) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Yarrie (J. Bull & D. Roberts CAL 01.05) - replace: Corchorus sp. Yarrie (J.Bull & D.Roberts CAL 01.05) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Corymbia candida subsp. xlautifolia replace: Corymbia candida subsp. x lautifolia reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1656,10 +1501,6 @@ taxonomic_updates: replace: Dicarpidium sp. B Kimberley Flora (G.J.Keighery 10138) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Dicarpidium sp. Mt Leake (T. Willing 469) - replace: Dicarpidium sp. Mt Leake (T.Willing 469) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Dicrastylis sp. Cue (A.A. Mitchell 764) replace: Dicrastylis sp. Cue (A.A.Mitchell 764) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1684,14 +1525,6 @@ taxonomic_updates: replace: Dillwynia sp. Coolgardie (V.E.Sands 637.3.1) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Dillwynia sp. Coujinup Hill (M.A. Burgman 1560) - replace: Dillwynia sp. Coujinup Hill (M.A.Burgman 1560) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Northern Sandplains (M. Hislop 3278) - replace: Dillwynia sp. Northern Sandplains (M.Hislop 3278) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Diuris sp. Arrowsmith (K.W. Dixon 924) replace: Diuris sp. Arrowsmith (K.W.Dixon 924) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1712,10 +1545,6 @@ taxonomic_updates: replace: Drummondita rubriviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Drummondita sp. Trayning (A.M. George 97) - replace: Drummondita sp. Trayning (A.M.George 97) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Echinochloa crusgalli replace: Echinochloa crus-galli reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1791,11 +1620,6 @@ taxonomic_updates: replace: Eryngium pinnatifidum subsp. minus MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Eryngium pinnatifidum subsp. pinnatifidum - replace: Eryngium pinnatifidum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Eryngium pinnatifidum subsp. pinnatifidum ms replace: Eryngium pinnatifidum reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -1813,20 +1637,10 @@ taxonomic_updates: replace: Erythrina x sykesii reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Eucalyptus absita x loxophleba - replace: Eucalyptus absita x Eucalyptus loxophleba - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus absita x loxophleba replace: Eucalyptus absita x Eucalyptus loxophleba reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Eucalyptus aspersa x falcata - replace: Eucalyptus aspersa x Eucalyptus falcata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus aspersa x falcata replace: Eucalyptus x [Eucalyptus aspersa x falcata] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -1837,26 +1651,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Eucalyptus buprestium x erectifolia - replace: Eucalyptus buprestium x Eucalyptus erectifolia - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x ligulata - replace: Eucalyptus buprestium x Eucalyptus ligulata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x marginata - replace: Eucalyptus buprestium x Eucalyptus marginata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x staeri - replace: Eucalyptus buprestium x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus buprestium x erectifolia replace: Eucalyptus x [Eucalyptus buprestium x erectifolia] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -1876,11 +1670,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus dielsii x platypus - replace: Eucalyptus dielsii x Eucalyptus platypus - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus dielsii x platypus replace: Eucalyptus dielsii x Eucalyptus platypus reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -1890,36 +1679,16 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-21) taxonomic_resolution: variety -- find: Eucalyptus loxophleba x wandoo - replace: Eucalyptus loxophleba x Eucalyptus wandoo - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus loxophleba x wandoo replace: Eucalyptus x [Eucalyptus loxophleba x wandoo] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus macrocarpa x pyriformis - replace: Eucalyptus macrocarpa x Eucalyptus pyriformis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus macrocarpa x pyriformis replace: Eucalyptus x [Eucalyptus macrocarpa x pyriformis] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus marginata x megacarpa - replace: Eucalyptus marginata x Eucalyptus megacarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus marginata x pachyloma - replace: Eucalyptus marginata x Eucalyptus pachyloma - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus marginata x megacarpa replace: Eucalyptus x [Eucalyptus marginata x megacarpa] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -1939,11 +1708,6 @@ taxonomic_updates: replace: Eucalyptus oldfieldii reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Eucalyptus preissiana x staeri - replace: Eucalyptus preissiana x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus preissiana x staeri replace: Eucalyptus x [Eucalyptus preissiana x staeri] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -2004,8 +1768,8 @@ taxonomic_updates: reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species - find: Eucalyptus trichopoda - replace: Eucalyptus trichopoda - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) + replace: Eucalyptus longissima + reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species - find: Eucalyptus vegrandis subsp. Fine leaf replace: Eucalyptus vegrandis subsp. Fine leaf (P.J.White 452) @@ -2081,11 +1845,6 @@ taxonomic_updates: replace: Euphorbia sp. B Kimberley Flora (B.J.Carter 629) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Eutaxia epacridoides subsp. epacridoides - replace: Eutaxia epacridoides - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Eutaxia epacridoides subsp. epacridoides ms replace: Eutaxia epacridoides reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2107,15 +1866,6 @@ taxonomic_updates: replace: Eutaxia neurocalyx subsp. major MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Eutaxia sp. Jasper Hill (R.J. Cranfield 8607) - replace: Eutaxia sp. Jasper Hill (R.J.Cranfield 8607) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eutaxia sp. North Ironcap (P. Armstrong PA 06/898) - replace: Eutaxia sp. North Ironcap (P.Armstrong et al. 06/898) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species - find: Festulolium loliaceum replace: Lolium arundinaceum subsp. arundinaceum reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2023-11-03) @@ -2205,28 +1955,11 @@ taxonomic_updates: replace: Gastrolobium wonganensis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A. Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A.Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Marchagee (A. Crawford ADC 1353) - replace: Geleznowia sp. Marchagee (A.Crawford ADC 1353) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Geleznowia verrucosa subsp. Kalbarri replace: Geleznowia verrucosa subsp. Kalbarri (L.M.Broadhurst 123) L.M.Broadh. reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: subspecies -- find: Geleznowia verrucosa subsp. verrucosa - replace: Geleznowia verrucosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Geleznowia verrucosa subsp. verrucosa ms replace: Geleznowia verrucosa reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2260,10 +1993,6 @@ taxonomic_updates: replace: Gnephosis sp. Pt Quobba (P.G.Wilson 12622) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Gompholobium sp. Stirling Range (C.F. Wilkins et al. CW 2513) - replace: Gompholobium sp. Stirling Range (C.F.Wilkins et al. CW 2513) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Gomphrena sp. Belele (D.W. Goodall 3215) replace: Gomphrena sp. Belele (D.W.Goodall 3215) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2277,11 +2006,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Gonocarpus benthamii subsp. benthamii - replace: Gonocarpus benthamii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Gonocarpus benthamii subsp. benthamii ms replace: Gonocarpus benthamii reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2390,22 +2114,6 @@ taxonomic_updates: replace: Grevillea sp. Stirling Range (D.J.McGillivray 3488 & A.S.George) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Grevillea sp. Trayning (W. Johnston WJ 071) - replace: Grevillea sp. Trayning (W. Johnston WJ 071) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Grevillea sp. Victoria Desert (R. Davis et al. RD 11611) - replace: Grevillea sp. Victoria Desert (R.Davis et al. RD 11611) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Yerilgee Hills (T. Laslett TL 025) - replace: Grevillea sp. Yerilgee Hills (T.Laslett TL 025) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea squiresae - replace: Grevillea squiresiae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Grevillea synapheae subsp. A Flora of Australia replace: Grevillea synapheae subsp. A Flora of Australia (S.D.Hopper 6333) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -2440,18 +2148,6 @@ taxonomic_updates: replace: Hakea cygnus subsp. needlei reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Hakea sp. Great Victoria Desert (L. Cockram LAC 139) - replace: Hakea sp. Great Victoria Desert (L.Cockram LAC 139) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (B. Keighery 2599) - replace: Hakea sp. Walyunga (B.Keighery 2599) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (L. Penn s.n.) - replace: Hakea sp. Walyunga (L.Penn s.n.) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hakea sp. Yalgorup (B.J. Keighery & N. Gibson 897) replace: Hakea sp. Yalgorup (B.J.Keighery & N.Gibson 897) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2471,11 +2167,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: variety -- find: Halgania gustafsenii var. gustafsenii - replace: Halgania gustafsenii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Halgania gustafsenii var. gustafsenii ms replace: Halgania gustafsenii reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2486,11 +2177,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: variety -- find: Halgania solanacea var. solanacea - replace: Halgania solanacea - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Halgania solanacea var. solanacea ms replace: Halgania solanacea reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2521,31 +2207,6 @@ taxonomic_updates: replace: Harmsiodoxa sp. Eremaean (A.S.George 3894) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Helicteres sp. Bachsten Creek (R.L. Barrett & M.D. Barrett RLB 3808) - replace: Helicteres sp. Bachsten Creek (R.L.Barrett & M.D.Barrett RLB 3808) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Carson River (I. Cowie & Wendell IC 4232) - replace: Helicteres sp. Carson River (I.Cowie & Wendell IC 4232) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Manning Peak (K.F. Kenneally 10266 & B.P.M. Hyland) - replace: Helicteres sp. Manning Peak (K.F.Kenneally 10266 & B.P.M.Hyland) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mertens Falls (K.F. Kenneally 7887) - replace: Helicteres sp. Mertens Falls (K.F.Kenneally 7887) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mt Shadforth (I.R. Telford 11609) - replace: Helicteres sp. Mt Shadforth (I.R.Telford 11609) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemiandra glabra subsp. glabra - replace: Hemiandra glabra - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Hemiandra glabra subsp. glabra ms replace: Hemiandra glabra reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2644,26 +2305,6 @@ taxonomic_updates: replace: Hibiscus sp. B Kimberley Flora (P.G.Wilson 11143) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Hibiscus sp. Canga (P.J.H. Hurter & J. Naaykens 11013) - replace: Hibiscus sp. Canga (P.J.H.Hurter & J.Naaykens 11013) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Brockman (E. Thoma ET 1354) - replace: Hibiscus sp. Mt Brockman (E.Thoma ET 1354) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Robinson (G. Byrne 3537) - replace: Hibiscus sp. Mt Robinson (G.Byrne 3537) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Theda (M.D. Barrett & R.L. Barrett MDB 2144) - replace: Hibiscus sp. Theda (M.D.Barrett & R.L.Barrett MDB 2144) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Wonganoo Station (K. Boladeras 125) - replace: Hibiscus sp. Wonganoo Station (K.Boladeras 125) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hybanthus floribundus subsp. Hill River replace: Hybanthus floribundus subsp. Hill River (E.M.Bennett 2252) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -2715,10 +2356,6 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Hypocalymma sp. Cascade (R. Bruhn 20896) - replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hypocalymma sp. Cataby (G.J. Keighery 5151) replace: Hypocalymma sp. Cataby (G.J.Keighery 5151) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2727,11 +2364,6 @@ taxonomic_updates: replace: Hypoxis sp. Prince Regent River (M.D.Barrett 924 B) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Indigofera gilesii subsp. gilesii - replace: Indigofera sp. Gilesii (M.E.Trudgen 15869) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Indigofera gilesii subsp. gilesii ms replace: Indigofera gilesii reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2745,14 +2377,6 @@ taxonomic_updates: replace: Indigofera sp. A Kimberley Flora (G.J.Keighery & N.Gibson 70) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Indigofera sp. Bungaroo Creek (S. van Leeuwen 4301) - replace: Indigofera sp. Bungaroo Creek (S.van Leeuwen 4301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Mackinlayi (A.A. Mitchell 7086) - replace: Indigofera sp. Mackinlayi (A.A.Mitchell 7086) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Indigofera sp. Warburton (A.A. Munir 5209) replace: Indigofera sp. Warburton (A.A.Munir 5209) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2769,18 +2393,6 @@ taxonomic_updates: replace: Isopogon sp. Canning Reservoir (M.D.Tindale 121 & B.R.Maslin) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Isopogon sp. Darling Range (F. Hort 1662) - replace: Isopogon sp. Darling Range (F.Hort 1662) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Fitzgerald River (D.B. Foreman 813) - replace: Isopogon sp. Fitzgerald River (D.B.Foreman 813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Ravensthorpe (D.B. Foreman 1207) - replace: Isopogon sp. Ravensthorpe (D.B.Foreman 1207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Isopogon sp. Watheroo (D. Foreman 477) replace: Isopogon sp. Watheroo (D.Foreman 477) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -2790,11 +2402,6 @@ taxonomic_updates: replace: Isotoma hypocrateriformis var. cristata MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: variety -- find: Isotoma hypocrateriformis var. hypocrateriformis - replace: Isotoma hypocrateriformis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Isotoma hypocrateriformis var. hypocrateriformis ms replace: Isotoma hypocrateriformis reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2805,18 +2412,10 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC (2022-11-22) taxonomic_resolution: variety -- find: Isotropis sp. Arid zone (G. Byrne 2775) - replace: Isotropis iophyta - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Isotropis sp. Shark Bay (M.E. Trudgen 7170) replace: Isotropis sp. Shark Bay (M.E.Trudgen 7170) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Isotropis sp. Yalgoo (S. Patrick 2375) - replace: Isotropis petrensis - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Jasminum sp. Exmouth (G. Marsh 77) replace: Jasminum sp. Exmouth (G.Marsh 77) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2829,19 +2428,10 @@ taxonomic_updates: replace: Josephinia sp. Mt Edgar Station (N.T.Burbidge 1194) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Kennedia sp. South coast (T.R. Lally 1576 & I.P. Lally) - replace: Kennedia sp. south coast (T.R.Lally 1576 & I.P.Lally) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Keraudrenia adenogyna replace: Keraudrenia adenogyna MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. cacaobrunnea ms - replace: Keraudrenia cacaobrunnea MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Keraudrenia cacaobrunnea subsp. undulata replace: Keraudrenia cacaobrunnea subsp. undulata MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2869,11 +2459,6 @@ taxonomic_updates: reason: Manual alignment with infraspecific canonical name in APC accepted (E. Wenk, 2023-11-02) taxonomic_resolution: subspecies -- find: Lasiopetalum cordifolium subsp. cordifolium - replace: Lasiopetalum cordifolium - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Lasiopetalum cordifolium subsp. cordifolium ms replace: Lasiopetalum cordifolium reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -2883,90 +2468,24 @@ taxonomic_updates: replace: Lasiopetalum leucogriseum MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Lasiopetalum molle subsp. molle - replace: Lasiopetalum molle - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Lasiopetalum molle subsp. molle ms replace: Lasiopetalum molle reason: Exact match of the first two words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: species -- find: Lasiopetalum oldfieldii subsp. oldfieldii - replace: Lasiopetalum oldfieldii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Lasiopetalum oldfieldii subsp. oldfieldii ms replace: Lasiopetalum oldfieldii reason: Exact match of the first two words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: species -- find: Lasiopetalum sp. Badgingarra (E.A. Griffin 5278) - replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E. Ried 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E.Reid 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Denmark (B.G. Hammersley 2012) - replace: Lasiopetalum sp. Denmark (B.G.Hammersley 2012) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Desmond (N. McQuoid 653) - replace: Lasiopetalum sp. Desmond (N.McQuoid 653) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Hill River (T.N. Stoate 5) - replace: Lasiopetalum sp. Hill River (T.N.Stoate 5) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Kukerin (C.A. Gardner 13646) - replace: Lasiopetalum sp. Kukerin (C.A.Gardner 13646) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Caroline (S.D. Hopper SDH 6381) - replace: Lasiopetalum sp. Mount Caroline (S.D.Hopper SDH 6381) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Lesueur (E.A. Griffin 1997) - replace: Lasiopetalum sp. Mount Lesueur (E.A.Griffin 1997) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mt Ragged (T.E.H. Aplin 4349) - replace: Lasiopetalum sp. Mt Ragged (T.E.H.Aplin 4349) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Lasiopetalum sp. Northam (F. Hort 1196) replace: Lasiopetalum sp. Northam (F.Hort 1196) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Lasiopetalum sp. Toodyay (F. Hort 2689) - replace: Lasiopetalum sp. Toodyay (F.Hort 2689) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Watheroo (K. Shepherd & C. Wilkins KS 220) - replace: Lasiopetalum erectifolium - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Weam Reserve (M. Hislop 2755) - replace: Lasiopetalum sp. Weam Reserve (M.Hislop 2755) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Latrobea pinnacula replace: Latrobea pinnaculum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Latrobea sp. South Coast (A.M. Ashby 1949) - replace: Latrobea sp. South Coast (A.M.Ashby 1949) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Lawrencia sp. Anna Plains (N.T. Burbidge 1433) replace: Lawrencia sp. Anna Plains (N.T.Burbidge 1433) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) @@ -3304,11 +2823,6 @@ taxonomic_updates: replace: Maytenus sp. Mt Windell (S.van Leeuwen 846) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Meeboldina decipiens subsp. decipiens - replace: Meeboldina decipiens MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Meeboldina decipiens subsp. decipiens ms replace: Meeboldina decipiens MS reason: Exact match of the first two words of the taxon name to an APC-known canonical @@ -3388,11 +2902,6 @@ taxonomic_updates: replace: Micromyrtus triptycha subsp. longiflora MS reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: subspecies -- find: Micromyrtus triptycha subsp. triptycha - replace: Micromyrtus triptycha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Micromyrtus triptycha subsp. triptycha ms replace: Micromyrtus triptycha reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -3414,14 +2923,6 @@ taxonomic_updates: replace: Mirbelia magentea MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Mirbelia sp. Bursarioides (T.R. Lally 760) - replace: Mirbelia sp. Bursarioides (T.R.Lally 760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Carnarvon (J.S. Beard 6008) - replace: Mirbelia sp. Carnarvon (J.S.Beard 6008) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mirbelia sp. Denham (W.E. Blackall 556) replace: Mirbelia sp. Denham (W.E.Blackall 556) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3434,18 +2935,10 @@ taxonomic_updates: replace: Mirbelia sp. Kalbarri (M.D.Crisp 6261) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Mirbelia sp. Magentea (T.E.H. Aplin 5976) - replace: Mirbelia sp. Magentea (T.E.H.Aplin 5976) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mirbelia sp. Mt Heywood (T.E.H. Aplin 4154) replace: Mirbelia sp. Mt Heywood (T.E.H.Aplin 4154) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Mirbelia sp. Ternata (M.D. Crisp & L.G. Cook MDC 9267) - replace: Mirbelia sp. Ternata (M.D.Crisp & L.G.Cook MDC 9267) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mirbelia sp. Zuytdorp (G.J. Keighery & N. Gibson 1688) replace: Mirbelia sp. Zuytdorp (G.J.Keighery & N.Gibson 1688) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3489,11 +2982,6 @@ taxonomic_updates: replace: Olearia dampieri MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Olearia dampieri subsp. dampieri - replace: Olearia dampieri MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Olearia dampieri subsp. dampieri ms replace: Olearia dampieri MS reason: Exact match of the first two words of the taxon name to an APC-known canonical @@ -3542,11 +3030,6 @@ taxonomic_updates: replace: Pelargonium australe subsp. drummondii MS reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: subspecies -- find: Pelargonium littorale subsp. littorale - replace: Pelargonium littorale - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Pelargonium littorale subsp. littorale ms replace: Pelargonium littorale reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -3585,18 +3068,6 @@ taxonomic_updates: replace: Petunia x hybrida reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Phebalium sp. Mt Gibbs (G.F. Craig 6658) - replace: Phebalium sp. Mt Gibbs (G.F.Craig 6658) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Yerilgee Sandplain (J. Jackson 223) - replace: Phebalium sp. Yerilgee Sandplain (J.Jackson 223) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Philotheca sp. Latham (F. Keast L4B 043) - replace: Philotheca sp. Latham (F.Keast L4B 043) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Philotheca spicata subsp. Moore River National Park replace: Philotheca spicata subsp. Moore River National Park (G. & D.Woodman Op 47) @@ -3679,11 +3150,6 @@ taxonomic_updates: replace: Poranthera sp. Kings Park (R.L.Barrett 2958) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Prosopis glandulosa x velutina - replace: Prosopis x [Prosopis glandulosa x Prosopis velutina] - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Prosopis glandulosa x velutina replace: Prosopis x [Prosopis glandulosa x Prosopis velutina] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -3849,10 +3315,6 @@ taxonomic_updates: replace: Ptilotus sp. Northampton (R.Davis 10952) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Ptilotus sp. Porongurup (R. Davis 10805) - replace: Ptilotus sp. Porongurup (R.Davis 10805) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Puccinellia sp. Warren Road (M.N. Lyons 2710) replace: Puccinellia sp. Warren Road (M.N.Lyons 2710) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3861,18 +3323,6 @@ taxonomic_updates: replace: Pultenaea sp. Kundip (G.F.Craig 6008) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (J.S. Beard 7827) - replace: Pultenaea sp. Mt Lesueur (J.S.Beard 7827) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (L.A. Orthia 86) - replace: Pultenaea sp. Mt Lesueur (L.A.Orthia 86) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. southern (L.A. Orthia 39) - replace: Pultenaea sp. southern (L.A.Orthia 39) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Rhagodia sp. Watheroo (R.J. Cranfield & P.J. Spencer 8183) replace: Rhagodia sp. Watheroo (R.J.Cranfield & P.J.Spencer 8183) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3893,16 +3343,6 @@ taxonomic_updates: replace: Rhynchospora sp. B Kimberley Flora (A.S.Weston 12363) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Rosa chinensis x moschata - replace: Rosa chinensis x Rosa moschata - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Rosa chinensis x multiflora - replace: Rosa chinensis x Rosa multiflora - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species - find: Rosa chinensis x moschata replace: Rosa chinensis x Rosa moschata reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in @@ -3913,10 +3353,6 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Rubus loganobaccus - replace: Rubus loganubaccus - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Rubus xloganobaccus replace: Rubus x loganobaccus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -4176,10 +3612,6 @@ taxonomic_updates: replace: Scholtzia sp. Valentine Road (S.Patrick 2142) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S.J.Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Scholtzia sp. Whelarra (M.E. Trudgen 12018) replace: Scholtzia sp. Whelarra (M.E.Trudgen 12018) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4249,10 +3681,6 @@ taxonomic_updates: replace: Sida sp. A Kimberley Flora (P.A.Fryxell & L.A.Craven 3900) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. Articulation below (A.A. Mitchell PRP 1605) - replace: Sida sp. Articulation below (A.A.Mitchell PRP1605) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. Barlee Range (S. van Leeuwen 1642) replace: Sida sp. Barlee Range (S.van Leeuwen 1642) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4269,30 +3697,6 @@ taxonomic_updates: replace: Sida sp. Carnarvon (P.S.Short 2492) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. Excedentifolia (J.L. Egan 1925) - replace: Sida sp. Excedentifolia (J.L.Egan 1925) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces glabrous (H.N. Foote 32) - replace: Sida sp. golden calyces glabrous (H.N.Foote 32) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces pubescent (G.J. Leach 1966) - replace: Sida sp. Golden calyces pubescent (G.J.Leach 1966) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Hamersley Range (K. Newbey 10692) - replace: Sida sp. Hamersley Range (K.Newbey 10692) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. L (A.M. Ashby 4202) - replace: Sida sp. L (A.M.Ashby 4202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Pilbara (A.A. Mitchell PRP 1543) - replace: Sida sp. Pilbara (A.A.Mitchell PRP1543) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. Pilbara (S. van Leeuwen 4377) replace: Sida sp. Pilbara (S. van Leeuwen 4377) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -4301,38 +3705,10 @@ taxonomic_updates: replace: Sida sp. Pindar (A.A.Mitchell 3585) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. Rabbit Flat (B.J. Carter 626) - replace: Sida sp. Rabbit Flat (B.J.Carter 626) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Shovelanna Hill (S. van Leeuwen 3842) - replace: Sida sp. Shovelanna Hill (S.van Leeuwen 3842) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Supplejack Station (T.S. Henshall 2345) - replace: Sida sp. Supplejack Station (T.S.Henshall 2345) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Watarrka (D.E. Albrecht 8672) - replace: Sida sp. Watarrka (D.E.Albrecht 8672) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Western sand dunes (P.K. Latz 11980) - replace: Sida sp. Western sand dunes (P.K.Latz 11980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. dark green fruits (S. van Leeuwen 2260) - replace: Sida sp. dark green fruits (S.van Leeuwen 2260) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. sand dunes (A.A. Mitchell PRP1208) replace: Sida sp. sand dunes (A.A.Mitchell PRP1208) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/1990) - replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/90) replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4427,22 +3803,14 @@ taxonomic_updates: replace: Synaphea sp. Jilakin Flat Rocks Rd (R.Butcher et al. RB200) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Synaphea sp. Kwornicup (D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup(D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) +- find: Synaphea sp. Pinjarra Plain (A.S. George 17182) + replace: Synaphea sp. Pinjarra Plain (A.S. George 17182) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species - find: Synaphea sp. Pinjarra (R. Davis 6578) replace: Synaphea sp. Pinjarra (R.Davis 6578) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Synaphea sp. Pinjarra Plain (A.S. George 17182) - replace: Synaphea sp. Pinjarra Plain (A.S. George 17182) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Synaphea sp. Redgate Road (J. Scott 16) replace: Synaphea sp. Redgate Road (J.Scott 16) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4463,11 +3831,6 @@ taxonomic_updates: replace: Tecticornia sp. Roy Hill (H.Pringle 62) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Tephrosia rosea var. Napier Range - replace: Tephrosia rosea var. Napier Range (C.R.Dunlop 7760 & B.K.Simon) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety - find: Tephrosia rosea var. glabrior replace: Tephrosia rosea var. glabrior MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4488,30 +3851,14 @@ taxonomic_updates: replace: Tephrosia sp. C Kimberley Flora (K.F.Kenneally 5599) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Carnarvon (J.H. Ross 2681) - replace: Tephrosia sp. Carnarvon (J.H.Ross 2681) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tephrosia sp. Cathedral Gorge (F.H. Mollemans 2420) replace: Tephrosia sp. Cathedral Gorge (F.H.Mollemans 2420) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Central (P.K. Latz 17037) - replace: Tephrosia sp. Central (P.K.Latz 17037) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tephrosia sp. D Kimberley Flora (R.D. Royce 1848) replace: Tephrosia sp. D Kimberley Flora (R.D.Royce 1848) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Dunes (J.R. Maconochie 938) - replace: Tephrosia sp. Dunes (J.R.Maconochie 938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Durack River (C.A. Gardner 9938) - replace: Tephrosia sp. Durack River (C.A.Gardner 9938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tephrosia sp. E Kimberley Flora (C.A. Gardner 9937) replace: Tephrosia sp. E Kimberley Flora (C.A.Gardner 9937) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4524,62 +3871,6 @@ taxonomic_updates: replace: Tephrosia sp. G Kimberley Flora (G.J.Keighery 4828) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Kennedy Range (J.S. Beard 4392) - replace: Tephrosia sp. Kennedy Range (J.S.Beard 4392) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Kununurra (T. Handasyde TH00 250) - replace: Tephrosia sp. Kununurra (T.Handesyde TH00 250) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Magazine Hill (P. Jones 365) - replace: Tephrosia sp. Magazine Hill (P.Jones 365) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Mistake Creek (A.C. Beauglehole 54424) - replace: Tephrosia sp. Mistake Creek (A.C.Beauglehole 54424) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. NW Eremaean (S. van Leeuwen et al. PBS 0356) - replace: Tephrosia sp. NW Eremaean (S.van Leeuwen et al. PBS 0356) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Newman (A.A. Mitchell PRP 29) - replace: Tephrosia sp. Newman (A.A.Mitchell PRP 29) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Northern (K.F. Kenneally 11950) - replace: Tephrosia sp. Northern (K.F.Kenneally 11950) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Onslow (K.R. Newbey 10571) - replace: Tephrosia sp. Onslow (K.R.Newbey 10571) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Pentecost River (I.D. Cowie 4168) - replace: Tephrosia sp. Pentecost River (I.D.Cowie 4168) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Saw Ranges (D. Kabay s.n. PERTH 06720544) - replace: Tephrosia sp. Saw Ranges (D.Kabay s.n. PERTH 06720544) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Willowra (G.M. Chippendale 4809) - replace: Tephrosia sp. Willowra (G.M.Chippendale 4809) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. clay soils (S. van Leeuwen et al. PBS 0273) - replace: Tephrosia sp. Clay soils (S.van Leeuwen et al. PBS 0273) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. deserts (J.R. Maconochie 1403) - replace: Tephrosia sp. deserts (J.R.Maconochie 1403) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. sparse pinnae (C.R. Michel 2202) - replace: Tephrosia sp. Sparse pinnae (C.R.Michell 2202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tetratheca sp. Granite (S. Patrick SP1224) replace: Tetratheca sp. Granite (S.Patrick SP1224) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4658,26 +3949,10 @@ taxonomic_updates: replace: Thomasia sp. Green Hill (S.Paust 1322) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Thomasia sp. Lesueur (M. Hislop 4217) - replace: Thomasia sp. Lesueur (M.Hislop 4217) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Merredin (M.B. Mills 11) - replace: Thomasia sp. Merredin (M.B.Mills 11) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Salmon Gums (C.A. Gardner s.n. PERTH 02708639) - replace: Thomasia sp. Salmon Gums (C.A.Gardner s.n. PERTH 02708639) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thomasia sp. Toolbrunup (G.J. Keighery 9895) replace: Thomasia sp. Toolbrunup (G.J.Keighery 9895) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Thomasia sp. Vasse (C. Wilkins & K. Shepherd CW 581) - replace: Thomasia sp. Vasse (C.Wilkins & K.Shepherd CW581) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thomasia xformosa replace: Thomasia x formosa reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4801,8 +4076,7 @@ taxonomic_updates: reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species - find: Tricoryne sp. Great Victoria Desert western dunes (C. Slee 645-211) - replace: Tricoryne sp. Great Victoria Desert western dunes (C. Slee - 645-211) + replace: Tricoryne sp. Great Victoria Desert western dunes (C. Slee 645-211) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species - find: Tricoryne sp. Kimberley (K.F. Kenneally 4857) @@ -4841,14 +4115,6 @@ taxonomic_updates: replace: Triodia sp. Mt Ella (M.E.Trudgen 12739) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Triumfetta sp. Adolphus Island (K.F. Kenneally 11898) - replace: Triumfetta sp. Adolphus Island (KF.Kenneally 11898) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triumfetta sp. Mt Bomford (M.D. Barrett MDB 1001) - replace: Triumfetta sp. Mt Bomford (M.D.Barrett MDB 1001) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Typhonium sp. Kununurra (A.N. Start ANS 1467) replace: Typhonium sp. Kununurra (A.N.Start ANS 1467) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4866,11 +4132,6 @@ taxonomic_updates: reason: Manual match to species, ignoring infraspecific information (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Verticordia serrata var. Udumung - replace: Verticordia serrata var. Udumung (D.Hunter & B.Yarran 941006) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety - find: Verticordia staminosa subsp. cylindracea var. cylindracea replace: Verticordia staminosa subsp. cylindracea reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -4885,14 +4146,6 @@ taxonomic_updates: replace: Verticordia x eurardyensis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Vigna sp. Hamersley Clay (A.A. Mitchell PRP 113) - replace: Vigna sp. Hamersley Clay (A.A.Mitchell PRP 113) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Vigna sp. northern pubescent (A.A. Mitchell 3667) - replace: Vigna sp. northern pubescent (A.A.Mitchell 3667) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Vittadinia sp. A Kimberley Flora (R.J. Cranfield 6527) replace: Vittadinia sp. A Kimberley Flora (R.J.Cranfield 6527) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4921,19 +4174,16 @@ taxonomic_updates: replace: Xyris atroviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Zornia sp. West Kimberley (C.A. Gardner 9942) - replace: Zornia sp. West Kimberley (C.A.Gardner 9942) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: xCyanthera glossodioides replace: x Cyanthera glossodioides reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species exclude_observations: - variable: taxon_name - find: Ecklonia radiata, Codium duthieae, Caulerpa scalpelliformis, Asparagopsis taxiformis + find: Ecklonia radiata, Codium duthieae, Caulerpa scalpelliformis, Asparagopsis + taxiformis reason: kelp - variable: taxon_name find: Syringa vulgaris, Ruschia macowanii reason: non-native, non-naturalised taxa -questions: .na +questions: .na diff --git a/data/WAH_2023_1/metadata.yml b/data/WAH_2023_1/metadata.yml index dcb9a55e0..dd60d1670 100644 --- a/data/WAH_2023_1/metadata.yml +++ b/data/WAH_2023_1/metadata.yml @@ -56,7 +56,7 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: yes - custom_R_code: ' + custom_R_code: ' data %>% filter(!is.na(taxon_name)) %>% filter(str_detect(taxon_name, " ")) %>% @@ -488,4095 +488,40 @@ substitutions: find: folded replace: conduplicate taxonomic_updates: -- find: Abutilon sp. Cape Range (A.S. George 1312) - replace: Abutilon sp. Cape Range (A.S.George 1312) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Dioicum (A.A. Mitchell PRP 1618) - replace: Abutilon sp. Dioicum (A.A.Mitchell PRP 1618) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Hamelin (A.M. Ashby 2196) - replace: Abutilon sp. Hamelin (A.M.Ashby 2196) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Onslow (F. Smith s.n. 10/9/61) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Pilbara (W.R. Barker 2025) - replace: Abutilon sp. Pilbara (W.R.Barker 2025) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Quobba (H. Demarz 3858) - replace: Abutilon sp. Quobba (H.Demarz 3858) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Warburton (A.S. George 8164) - replace: Abutilon sp. Warburton (A.S.George 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia drummondii subsp. elegans Porongurup variant - replace: Acacia drummondii subsp. elegans Porongurup variant (R.J.Cumming 938) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Acacia eremophila var. Numerous-nerved variant - replace: Acacia eremophila var. Numerous-nerved variant (A.S.George 11924) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Acacia lasiocarpa var. bracteolata long peduncle variant - replace: Acacia lasiocarpa var. bracteolata Long Peduncle variant (G.J.Keighery - 5026) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Acacia lasiocarpa var. lasiocarpa Cockleshell Gully variant - replace: Acacia lasiocarpa var. lasiocarpa Cockleshell Gully variant (E.A.Griffin - 2039) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Acacia lateriticola var. Glabrous variant - replace: Acacia lateriticola var. Glabrous variant (B.R.Maslin 6765) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Acacia leioderma var. Fitzgerald River N.P. variant - replace: Acacia leioderma var. Fitzgerald River N.P. variant (A.S.George 9922) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Acacia monticola x trachycarpa - replace: Acacia monticola x Acacia trachycarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Acacia mutabilis subsp. Young River - replace: Acacia mutabilis subsp. Young River (G.F.Craig 2052) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Acacia pulchella var. reflexa acuminate bracteole variant - replace: Acacia pulchella var. reflexa Acuminate bracteole variant (R.J.Cumming - 882) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Acacia sp. Barklys (J.L. Egan 124) - replace: Acacia sp. Barklys (J.L.Egan 124) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Broome (B.R. Maslin 4918) - replace: Acacia sp. Broome (B.R.Maslin 4918) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Bungalbin Hill (J.J. Alford 1119) - replace: Acacia sp. Bungalbin Hill (J.J.Alford 1119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cadoux (B.R.Maslin 5786) - replace: Acacia sp. Cadoux (B.R.Maslin 5786) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cadoux (B.R. Maslin 5786) - replace: Acacia sp. Cadoux (B.R.Maslin 5786) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cape Arid (A.S.Weston 8164) - replace: Acacia sp. Cape Arid (A.S.Weston 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cape Arid (A.S. Weston 8164) - replace: Acacia sp. Cape Arid (A.S.Weston 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Carson River (M. McDonald MM1890) - replace: Acacia sp. Carson River (M.McDonald MM1890) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cockburn Range (R. Pullen 10.763) - replace: Acacia sp. Cockburn Range (R.Pullen 10.763) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Edgar Range (S.D. Hopper 1763) - replace: Acacia sp. Edgar Range (S.D.Hopper 1763) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Esperance (M.A. Burgman 1833b) - replace: Acacia sp. Esperance (M.A.Burgman 1833b) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. F Kimberley Flora (J.J. Alford 557) - replace: Acacia sp. F Kimberley Flora (J.J.Alford 557) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Goodlands (B.R. Maslin 7761) - replace: Acacia sp. Goodlands (B.R.Maslin 7761) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Jimblebar (S. van Leeuwen 1342) - replace: Acacia sp. Jimblebar (S.van Leeuwen 1342) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie (B.R. Maslin 7571) - replace: Acacia sp. Kalannie (B.R.Maslin 7571) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie (B.R. Maslin 7706) - replace: Acacia sp. Kalannie (B.R.Maslin 7706) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie North (B.R. Maslin 7702) - replace: Acacia sp. Kalannie North (B.R.Maslin 7702) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kalannie North East (B.R. Maslin 7519) - replace: Acacia sp. Kalannie North East (B.R.Maslin 7519) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kulin (S. Murray 504) - replace: Acacia sp. Kulin (S.Murray 504) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Kununurra (Lullfitz 6195) - replace: Acacia sp. Kununurra (G.Lullfitz 6195) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Lake King (R. Hnatiuk 760791) - replace: Acacia sp. Lake King (R.Hnatiuk 760791) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Little Sandy Desert (A.S. Mitchell 591) - replace: Acacia sp. Little Sandy Desert (A.S.Mitchell 591) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Manmanning (B.R. Maslin 7711) - replace: Acacia sp. Manmanning (B.R.Maslin 7711) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Marble Bar (J.G. & M.H. Simmons 3499) - replace: Acacia sp. Marble Bar (J.G. & M.H.Simmons 3499) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Minnie Creek (B.R. Maslin 5217) - replace: Acacia sp. Minnie Creek (B.R.Maslin 5217) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Moorine Rock (B.R. Maslin 4474) - replace: Acacia sp. Moorine Rock (B.R.Maslin 4474) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Mt Augustus (S.D. Hopper 3181) - replace: Acacia sp. Mt Augustus (S.D.Hopper 3181) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Mt Jackson (B. Ryan 176) - replace: Acacia sp. Mt Jackson (B.Ryan 176) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Acacia sp. Muggon Station (S. Patrick & D. Edinger SP 3235) - replace: Acacia sp. Muggon Station (S.Patrick & D.Edinger SP3235) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Mullewa (B.R. Maslin 4269) - replace: Acacia sp. Mullewa (B.R.Maslin 4269) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. New Norcia (E.A. Griffin 5917) - replace: Acacia sp. New Norcia (E.A.Griffin 5917) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Norseman (B. Archer 1554) - replace: Acacia sp. Norseman (B.Archer 1554) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Nullagine (B.R. Maslin 4955) - replace: Acacia sp. Nullagine (B.R.Maslin 4955) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P174 (J.M. Brown 228) - replace: Acacia sp. P174 (J.M.Brown 228) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P176 (B.R. Maslin 5831) - replace: Acacia sp. P176 (B.R.Maslin 5831) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P19 (A.A. Mitchell 231) - replace: Acacia sp. P19 (A.A.Mitchell 231) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P69 (W.E. Blackall 3754) - replace: Acacia sp. P69 (W.E.Blackall 3754) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. P94 (J.S. Beard 6178) - replace: Acacia sp. P94 (J.S.Beard 6178) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Peak Hill (R. Gibson 0003) - replace: Acacia sp. Peak Hill (R.Gibson 0003) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Acacia sp. Petrudor Rocks (B.R. Maslin 7714) - replace: Acacia sp. Petrudor Rocks (B.R.Maslin 7714) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Ravensthorpe (R.S. Cowan & B.R. Maslin RSC A-760) - replace: Acacia sp. Ravensthorpe (R.S.Cowan & B.R.Maslin RSC A-760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Ravensthorpe Range (B.R. Maslin 5463) - replace: Acacia sp. Ravensthorpe Range (B.R.Maslin 5463) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Riddell Beach (T. Willing 71) - replace: Acacia sp. Riddell Beach (T.Willing 71) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Rudall River (B.R. Maslin 2237) - replace: Acacia sp. Rudall River (B.R.Maslin 2237) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Shark Bay (B.R. Maslin 3682) - replace: Acacia sp. Shark Bay (B.R.Maslin 3682) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Trent River (K.F. Kenneally 11701) - replace: Acacia sp. Trent River (K.F.Kenneally 11701) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Weld Range (A. Markey & S. Dillon 2994) - replace: Acacia sp. Weld Range (A.Markey & S.Dillon 2994) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Wiluna (B.R. Maslin 7090) - replace: Acacia sp. Wiluna (B.R.Maslin 7090) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Windy Corner (P.K. Latz 17865) - replace: Acacia sp. Windy Corner (P.K.Latz 17865) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Acacia sp. Wren Creek Crossing (K.F. Kenneally 11853) - replace: Acacia sp. Wren Creek Crossing (K.F.Kenneally 11853) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. narrow phyllode (B.R. Maslin 7831) - replace: Acacia sp. Narrow phyllode (B.R.Maslin 7831) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. small seed (B.R. Maslin 7830) - replace: Acacia sp. Small seed (B.R.Maslin 7830) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia trachycarpa x tumida var. pilbarensis - replace: Acacia trachycarpa x Acacia tumida var. pilbarensis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. A Kimberley Flora (C.R. Dunlop 5303) - replace: Actinoschoenus sp. A Kimberley Flora (C.R.Dunlop 5303) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. B Kimberley Flora (G.J. Keighery 2649) - replace: Actinoschoenus sp. B Kimberley Flora (G.J.Keighery 2649) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. C Kimberley Flora (P.G. Wilson s.n. 12/5/72) - replace: Actinoschoenus sp. C Kimberley Flora (P.G.Wilson s.n. 12/5/72) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. D Kimberley Flora (K.F. Kenneally 4789) - replace: Actinoschoenus sp. D Kimberley Flora (K.F.Kenneally 4789) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinoschoenus sp. E Kimberley Flora (C.R. Dunlop 5309) - replace: Actinoschoenus sp. E Kimberley Flora (C.R.Dunlop 5309) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinotus sp. Comet Vale (A.V. Milewski AVM 1093) - replace: Actinotus sp. Comet Vale (A.V.Milewski AVM1093) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Actinotus sp. Walpole (J.R. Wheeler 3786) - replace: Actinotus sp. Walpole (J.R.Wheeler 3786) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Alyogyne angulata - replace: Alyogyne angulata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne angustiloba - replace: Alyogyne angustiloba MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne coronopifolia - replace: Alyogyne coronopifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne pyrrhophila - replace: Alyogyne pyrrhophila MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Geraldton (R. Davis 3487) - replace: Alyogyne sp. Geraldton (R.Davis 3487) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Great Victoria Desert (D.J. Edinger 6212) - replace: Alyogyne sp. Great Victoria Desert (D.J.Edinger 6212) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hutt River (B.J. Lepschi & T.R. Lally 2310) - replace: Alyogyne sp. Hutt River (B.J.Lepschi & T.R.Lally 2310) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S. Durell GD 127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S.Durrell GD127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Rockingham (G.J. Keighery 14463) - replace: Alyogyne sp. Rockingham (G.J.Keighery 14463) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne wrayae - replace: Alyogyne wrayae MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Amaranthus sp. A Kimberley Flora (C.A. Gardner s.n. PERTH 00326518) - replace: Amaranthus sp. A Kimberley Flora (C.A.Gardner s.n. PERTH 00326518) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Amyema sp. Fortescue (M.E. Trudgen 5358) - replace: Amyema sp. Fortescue (M.E.Trudgen 5358) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Anacampseros sp. Eremaean (F. Hort, J. Hort & J. Shanks 3248) - replace: Anacampseros sp. Eremaean (F.Hort, J.Hort & J.Shanks 3248) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia caerulea subsp. caerulea - replace: Andersonia caerulea var. caerulea - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: variety -- find: Andersonia fallax - replace: Andersonia fallax MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia jamesii - replace: Andersonia jamesii MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia sp. Frankland (W. Jackson BJ8) - replace: Andersonia sp. Frankland (W.Jackson BJ8) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia sp. Lower King (N. Hoyle 1500) - replace: Andersonia sp. Lower King (N.Hoyle 1500) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Andersonia sp. Mitchell River (B.G. Hammersley 925) - replace: Andersonia sp. Mitchell River (B.G.Hammersley 925) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Anthocercis sp. Shark Bay (T.E.H. Aplin 3335) - replace: Anthocercis sp. Shark Bay (T.E.H.Aplin 3335) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Anthotium sp. Darling Range (F. Hort & B. Hort 2431) - replace: Anthotium sp. Darling Range (F.Hort & B.Hort 2431) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Anthotium sp. Peaceful Bay (J.R. Wheeler 3772 & S.J. Patrick) - replace: Anthotium sp. Peaceful Bay (J.R.Wheeler 3772 & S.J.Patrick) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Aotus sp. Cunderdin (B.J. Lepschi et al. 3587) - replace: Aotus sp. Cunderdin (B.J.Lepschi et al. 3587) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Aotus sp. Dundas (M.A. Burgman 2835) - replace: Aotus sp. Dundas (M.A.Burgman 2835) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Bungalbin Hill (K.R. Newbey 8989) - replace: Astartea sp. Bungalbin Hill (K.R.Newbey 8989) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Esperance (A. Fairall 2431) - replace: Astartea sp. Esperance (A.Fairall 2431) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Fitzgerald (K.R. Newbey 10844) - replace: Astartea sp. Fitzgerald (K.R.Newbey 10844) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Gingalup (N. Gibson & M. Lyons 119) - replace: Astartea sp. Gingalup (N.Gibson & M.Lyons 119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Hopetoun area (A.S. George 10594) - replace: Astartea sp. Hopetoun area (A.S.George 10594) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Jerdacuttup (A. Strid 21898) - replace: Astartea sp. Jerdacuttup (A.Strid 21898) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Jyndabinbin Rocks (K.R. Newbey 7689) - replace: Astartea sp. Jyndabinbin Rocks (K.R.Newbey 7689) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Mt Dimer (C. McChesney TRL4/72) - replace: Astartea sp. Mt Dimer (C.McChesney TRL4/72) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Mt Johnston (A.R. Annels 5645) - replace: Astartea sp. Mt Johnston (A.R.Annels 5645) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Red Hill (K.R. Newbey 8462) - replace: Astartea sp. Red Hill (K.R.Newbey 8462) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. Scott River (D. Backshall 88233) - replace: Astartea sp. Scott River (D.Backshall 88233) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. big bracteoles (A.R. Annels 995) - replace: Astartea sp. big bracteoles (A.R.Annels 995) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astartea sp. long stalks (D. Foreman 1490) - replace: Astartea sp. long stalks (D.Foreman 1490) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Asterolasia sp. Kalgan River (S. Barrett 1522) - replace: Asterolasia sp. Kalgan River (S.Barrett 1522) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Cataby (E.A. Griffin 1022) - replace: Astroloma sp. Cataby (E.A.Griffin 1022) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Grass Patch (A.J.G. Wilson 110) - replace: Astroloma sp. Grass Patch (A.J.G.Wilson 110) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Nannup (R.D. Royce 3978) - replace: Astroloma sp. Nannup (R.D.Royce 3978) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. Tutanning (A.S. George 7779) - replace: Astroloma sp. Tutanning (A.S.George 7779) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Astroloma sp. sessile leaf (J.L. Robson 657) - replace: Astroloma sp. sessile leaf (J.L.Robson 657) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Atriplex sp. De Grey (A.A. Mitchell PRP1940) - replace: Atriplex sp. De Grey (A.A.Mitchell PRP1940) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Austrodolichos erubescens - replace: Austrodolichos erubescens MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Axonopus affinis replace: Axonopus fissifolius reason: Manual alignment with accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Baeckea sp. Baladjie (P.J. Spencer 24) - replace: Baeckea sp. Baladjie (P.J.Spencer 24) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bencubbin-Koorda (M.E. Trudgen 5421) - replace: Baeckea sp. Bencubbin-Koorda (M.E.Trudgen 5421) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) +- find: Conostylis seorsiflora subsp. Nyabing + replace: Conostylis seorsiflora subsp. Nyabing (A.Coates s.n. 2/10/1998) + reason: Manual alignment with accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Baeckea sp. Beringbooding (A.R. Main 11/9/1957) - replace: Baeckea sp. Beringbooding (A.R.Main 11/9/1957) +- find: Drummondita rubroviridis + replace: Drummondita rubriviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Billeranga Hills (M.E. Trudgen 2206) - replace: Baeckea sp. Billeranga Hills (M.E.Trudgen 2206) +- find: Echinochloa crusgalli + replace: Echinochloa crus-galli reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Bulla Bulling (D.J.E. Whibley 4648) - replace: Baeckea sp. Bulla Bulling (D.J.E.Whibley 4648) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bungalbin Hill (B.J. Lepschi & L.A. Craven 4586) - replace: Baeckea sp. Bungalbin Hill (B.J.Lepschi & L.A.Craven 4586) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bunjil (B.R. Maslin 5067) - replace: Baeckea sp. Bunjil (B.R.Maslin 5067) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Bunney Road (S. Patrick 4059) - replace: Baeckea sp. Bunney Road (S.Patrick 4059) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Calingiri (F. Hort 1710) - replace: Baeckea sp. Calingiri (F.Hort 1710) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Chittering (R.J. Cranfield 1983) - replace: Baeckea sp. Chittering (R.J.Cranfield 1983) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Darling Range (R.J. Cranfield 1673) - replace: Baeckea sp. Darling Range (R.J.Cranfield 1673) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Die Hardy Range (E. Mattiske J91) - replace: Baeckea sp. Die Hardy Range (E.Mattiske J91) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. East Yuna (R. Spjut & C. Edson 7077) - replace: Baeckea sp. East Yuna (R.Spjut & C.Edson 7077) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) +- find: Freesia alba x leichtlinii + replace: Freesia alba x Freesia leichtlinii + reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Baeckea sp. Elsewhere Road (M.E. Trudgen 5420) - replace: Baeckea sp. Elsewhere Road (M.E.Trudgen 5420) +- find: Ptilotus sp. Beaufort River (G.J. Keighery 16554) + replace: Ptilotus sp. Beaufort River (G.J.Keighery 16554) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Eujinyn (J. Buegge D 99) - replace: Baeckea sp. Eujinyn (J.Buegge D 99) +- find: Ptilotus sp. Mt Narryer (A.S. George 17484) + replace: Ptilotus sp. Mt Narryer (A.S.George 17484) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Exclamation Lake (M.E. Trudgen 1524) - replace: Baeckea sp. Exclamation Lake (M.E.Trudgen 1524) +- find: Ptilotus sp. Northampton (R. Davis 10952) + replace: Ptilotus sp. Northampton (R.Davis 10952) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Forrestania (K.R. Newbey 1105) - replace: Baeckea sp. Forrestania (K.R.Newbey 1105) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Gibson (K.R. Newbey 11084) - replace: Baeckea sp. Gibson (K.R.Newbey 11084) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Great Victoria Desert (A.S. Weston 14813) - replace: Baeckea sp. Great Victoria Desert (A.S.Weston 14813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Hatter Hill (K.R. Newbey 3284) - replace: Baeckea sp. Hatter Hill (K.R.Newbey 3284) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Helena & Aurora Range (G.J.Keighery 4424) - replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Helena and Aurora Range (G.J. Keighery 4424) - replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Hyden (J.M. Brown 141) - replace: Baeckea sp. Hyden (J.M.Brown 141) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Jaurdi Station (L.W. Sage & F. Hort 2229) - replace: Baeckea sp. Jaurdi Station (L.W.Sage & F.Hort 2229) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Koorda (W.E. Blackall 3371) - replace: Baeckea sp. Koorda (W.E.Blackall 3371) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Lake Cronin (K.R. Newbey 9191) - replace: Baeckea sp. Lake Cronin (K.R.Newbey 9191) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. London Bridge (M.E. Trudgen 5393) - replace: Baeckea sp. London Bridge (M.E.Trudgen 5393) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Melita Station (H. Pringle 2738) - replace: Baeckea sp. Melita Station (H.Pringle 2738) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Merredin (K.R. Newbey 2506) - replace: Baeckea sp. Merredin (K.R.Newbey 2506) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Mingenew (M.E. Trudgen 12029) - replace: Baeckea sp. Mingenew (M.E.Trudgen 12029) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Moora (R. Bone 1993/1) - replace: Baeckea sp. Moora (R.Bone 1993/1) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Morawa (M.A. Langley MAL4177) - replace: Baeckea sp. Morawa (M.A.Langley MAL4177) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Mount Barloweerie (J.Z. Weber 5079) - replace: Baeckea sp. Mount Barloweerie (J.Z.Weber 5079) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Mt Glasse (P.G. Wilson 5717) - replace: Baeckea sp. Mt Glasse (P.G.Wilson 5717) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Muntadgin (E.T. Bailey 231) - replace: Baeckea sp. Muntadgin (E.T.Bailey 231) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Murchison River (M.E. Trudgen 12009) - replace: Baeckea sp. Murchison River (M.E.Trudgen 12009) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Nanga (A.S. George 11346) - replace: Baeckea sp. Nanga (A.S.George 11346) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Narembeen (G.J. Keighery & N. Gibson 3010) - replace: Baeckea sp. Narembeen (G.J.Keighery & N.Gibson 3010) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Narrogin (R. Hnatiuk 780011) - replace: Baeckea sp. Narrogin (R.Hnatiuk 780011) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Nolba (M.E. Trudgen MET21632) - replace: Baeckea sp. Nolba (M.E.Trudgen MET21632) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. North Ironcap (R.J. Cranfield 10580) - replace: Baeckea sp. North Ironcap (R.J.Cranfield 10580) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Parker Range (M. Hislop & F. Hort MH 2968) - replace: Baeckea sp. Parker Range (M.Hislop & F.Hort MH 2968) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Payne's Find (S.Patrick 1095) - replace: Baeckea sp. Paynes Find (S.Patrick 1095) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Paynes Find (S. Patrick 1095) - replace: Baeckea sp. Paynes Find (S.Patrick 1095) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Perenjori (J.W. Green 1516) - replace: Baeckea sp. Perenjori (J.W.Green 1516) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Perth Region (R.J. Cranfield 444) - replace: Baeckea sp. Perth Region (R.J.Cranfield 444) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Pigeon Rocks (D. Grace DJP 281) - replace: Baeckea sp. Pigeon Rocks (D.Grace DJP 281) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Sandstone (C.A. Gardner s.n. 26 Oct. 1963) - replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Sandstone (C.A.Gardner s.n., 26 Oct. 1963) - replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Sheoaks Rocks (M.E. Trudgen MET5452) - replace: Baeckea sp. Sheoaks Rocks (M.E.Trudgen MET5452) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Baeckea sp. Stockton Road (M.E. Trudgen MET22077 & B. Rye) - replace: Baeckea sp. Stockton Road (M.E.Trudgen MET22077 & B.Rye) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Tammin (R. Coveny 8319 & B. Habberley) - replace: Baeckea sp. Tammin (R.Coveny 8319 & B.Habberley) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Three Springs (M.E. Trudgen 5368) - replace: Baeckea sp. Three Springs (M.E.Trudgen 5368) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Walkaway (A.S. George 11249) - replace: Baeckea sp. Walkaway (A.S.George 11249) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Western Australia (J. Drummond s.n.) - replace: Baeckea sp. Western Australia (J.Drummond s.n.) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Whelarra (A.C. Burns 7) - replace: Baeckea sp. Whelarra (A.C.Burns 7) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Wialki (G.M. Storr s.n. 4/10/1958) - replace: Baeckea sp. Wialki (G.M.Storr s.n. 4/10/1958) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Wubin (M.E. Trudgen 5404) - replace: Baeckea sp. Wubin (M.E.Trudgen 5404) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Yacke Yackine Dam (K.R. Newbey 9195) - replace: Baeckea sp. Yacke Yackine Dam (K.R.Newbey 9195) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Youndegin Hill (A.S. George 15772) - replace: Baeckea sp. Youndegin Hill (A.S.George 15772) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Yuna (M.E. Trudgen 2224) - replace: Baeckea sp. Yuna (M.E.Trudgen 2224) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Banksia dallanneyi subsp. dallanneyi var. dallanneyi - replace: Banksia dallanneyi subsp. dallanneyi - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Banksia dallanneyi subsp. dallanneyi var. mellicula - replace: Banksia dallanneyi var. mellicula - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Banksia nivea subsp. Morangup - replace: Banksia nivea subsp. Morangup (M.Pieroni 9/42) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Banksia sp. Boyup Brook (L.W. Sage LWS 2366) - replace: Banksia sp. Boyup Brook (L.W.Sage LWS 2366) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Baumea preissii subsp. laxa - replace: Baumea preissii subsp. laxa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Beaufortia sp. column (J.S. Beard 8119) - replace: Beaufortia sp. Column (J.S.Beard 8119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. A Ravensthorpe (A.S. George 9474) - replace: Beyeria sp. A Ravensthorpe (A.S.George 9474) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. Bandalup Hill (G. Cockerton 7553) - replace: Beyeria sp. Bandalup Hill (G.Cockerton 7553) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. Jackson Range (R. Cranfield & P. Spencer 7751) - replace: Beyeria sp. Jackson Range (R.Cranfield & P.Spencer 7751) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Beyeria sp. Murchison (B. Jeanes s.n. 7/7/2005) - replace: Beyeria sp. Murchison (B.Jeanes s.n. 7/7/2005) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Boronia crenulata subsp. Shark Bay - replace: Boronia crenulata subsp. Shark Bay (G.Cockerton 5187) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Boronia crenulata subsp. crenulata var. angustifolia - replace: Boronia crenulata var. angustifolia - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Boronia sp. Leeuwin (J. Scott 235) - replace: Boronia sp. Leeuwin (J.Scott 235) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Boronia sp. Location 4264 (R. Turner s.n.) - replace: Boronia sp. Location 4264 (R.Turner s.n., 23 Sept. 1999) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Borya sp. Wheatbelt (A.S. George 16470) - replace: Borya sp. Wheatbelt (A.S.George 16470) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Bremer (K. Newbey 2980) - replace: Bossiaea sp. Bremer (K.Newbey 2980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Frankland (E.M. Sandiford EMS 896) - replace: Bossiaea sp. Frankland (E.M.Sandiford EMS 896) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Jackson Range (G. Cockerton & S. McNee LCS 13614) - replace: Bossiaea sp. Jackson Range (G.Cockerton & S.McNee LCS 13614) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Waroona (B.J. Keighery & N. Gibson 229) - replace: Bossiaea sp. Waroona (B.J.Keighery & N.Gibson 229) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Brassica xjuncea - replace: Brassica x juncea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brassica xnapus - replace: Brassica x napus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brunonia sp. Long hairs (D.E. Symon 2440) - replace: Brunonia sp. Long Hairs (D.E.Symon 2440) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brunoniella acaulis var. acaulis - replace: Brunoniella acaulis subsp. acaulis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Caesia sp. Wongan (K.F. Kenneally 8820) - replace: Caesia sp. Wongan (K.F.Kenneally 8820) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia sp. Muddarning Hill (S.D. Hopper 4013) - replace: Caladenia sp. Muddarning Hill (S.D.Hopper 4013) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia sp. Wyalkatchem (G.B. Brockman GBB 661) - replace: Caladenia sp. Wyalkatchem (G.B.Brockman GBB 661) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xaestantha - replace: Caladenia x aestantha - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xcala - replace: Caladenia x cala - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xcoactescens - replace: Caladenia x coactescens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xeludens - replace: Caladenia x eludens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xenigma - replace: Caladenia x enigma - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xericksoniae - replace: Caladenia x ericksoniae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xerminea - replace: Caladenia x erminea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xexoleta - replace: Caladenia x exoleta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xexserta - replace: Caladenia x exserta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xhypata - replace: Caladenia x hypata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xidiastes - replace: Caladenia x idiastes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xlavandulacea - replace: Caladenia x lavandulacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xornata - replace: Caladenia x ornata - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xresupina - replace: Caladenia x resupina - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xspectabilis - replace: Caladenia x spectabilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xsuffusa - replace: Caladenia x suffusa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xtriangularis - replace: Caladenia x triangularis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xtryphera - replace: Caladenia x tryphera - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Bungalbin (G.J. Keighery & N. Gibson 1656) - replace: Calandrinia sp. Bungalbin (G.J.Keighery & N.Gibson 1656) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Coolcalalaya (G.J. Keighery & N. Gibson 698) - replace: Calandrinia sp. Coolcalalaya (G.J.Keighery & N.Gibson 698) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Kenwick (G.J. Keighery 10905) - replace: Calandrinia sp. Kenwick (G.J.Keighery 10905) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Needilup (K.R. Newbey 4892) - replace: Calandrinia sp. Needilup (K.R.Newbey 4892) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Ongerup (K.R. Newbey 11834) - replace: Calandrinia sp. Ongerup (K.R.Newbey 11834) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Piawaning (A.C. Beauglehole 12257) - replace: Calandrinia sp. Piawaning (A.C.Beauglehole 12257) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. The Pink Hills (F. Obbens FO 19/06) - replace: Calandrinia sp. The Pink Hills (F.Obbens FO 19/06) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calectasia grandiflora subsp. Wheatbelt - replace: Calectasia grandiflora (Wheatbelt variant) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Calectasia sp. Pinjar (C. Tauss 557) - replace: Calectasia sp. Pinjar (C.Tauss 557) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Callistachys sp. south-coast variant (M. Carter 180) - replace: Callistachys sp. south-coast variant (M.Carter 180) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calocephalus sp. Pilbara-Desert (M.E. Trudgen 11454) - replace: Calocephalus sp. Pilbara-Desert (M.E.Trudgen 11454) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calocephalus sp. Wittenoom (A.S. George 1082) - replace: Calocephalus sp. Wittenoom (A.S.George 1082) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calochilus sp. Hopetoun (H. Taylor s.n.) - replace: Calochilus sp. Hopetoun (H.Taylor s.n.) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calochilus sp. South-west swamps (B.G. Hammersley 1010) - replace: Calochilus sp. South-west swamps (B.G.Hammersley 1010) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calochilus sp. Wandoo Beard Orchid (D.M. Rose 344) - replace: Calochilus sp. Wandoo Beard Orchid (D.M.Rose 344) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calothamnus sp. Mt Lindesay (B.G. Hammersley 439) - replace: Calothamnus sp. Mt Lindesay (B.G.Hammersley 439) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calothamnus sp. Scott River (R.D. Royce 84) - replace: Calothamnus sp. Scott River (R.D.Royce 84) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calothamnus sp. Whicher (B.J. Keighery & N. Gibson 230) - replace: Calothamnus sp. Whicher (B.J.Keighery & N.Gibson 230) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix acutifolia subsp. brevifolia - replace: Calytrix acutifolia subsp. brevifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Calytrix sp. Dragon Rocks (K. Kershaw & L. Kerrigan KK 2180) - replace: Calytrix sp. Dragon Rocks (K.Kershaw & L.Kerrigan KK 2180) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Eneabba (B.J. Lepschi & T.R. Lally BJL3617) - replace: Calytrix sp. Eneabba (B.J.Lepschi & T.R.Lally BJL3617) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Esperance (M.A. Burgman 4268A) - replace: Calytrix sp. Esperance (M.A.Burgman 4268A) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Jingaring (F. Obbens, R. Davis & L.W. Sage LWS1332) - replace: Calytrix sp. Jingaring (F.Obbens, R.Davis & L.W.Sage LWS1332) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Scarp (H. Bowler 270) - replace: Calytrix sp. Scarp (H.Bowler 270) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Tutunup (G.J. Keighery & N. Gibson 2953) - replace: Calytrix sp. Tutunup (G.J.Keighery & N.Gibson 2953) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calytrix sp. Wheatbelt (R. Davis 4544) - replace: Calytrix sp. Wheatbelt (R.Davis 4544) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Canna xgeneralis - replace: Canna x generalis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Canna xorchiodes - replace: Canna x orchiodes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cardamine sp. Jandakot (P. Luff s.n. 4/7/1969) - replace: Cardamine sp. Jandakot (P.Luff s.n. 4/7/1969) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Carpobrotus sp. Thevenard Island (M. White 050) - replace: Carpobrotus sp. Thevenard Island (M.White 050) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cartonema sp. A Kimberley Flora (S.J. Forbes 2163) - replace: Cartonema sp. A Kimberley Flora (S.J.Forbes 2163) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cartonema sp. B Kimberley Flora (D.J. Edinger 336) - replace: Cartonema sp. B Kimberley Flora (D.J.Edinger 336) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caustis sp. Boyanup (G.S. McCutcheon 1706) - replace: Caustis sp. Boyanup (G.S.McCutcheon 1706) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Chamelaucium pauciflorum subsp. thryptomenioides - replace: Chamelaucium pauciflorum subsp. thryptomenoides - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Chamelaucium sp. Yalgoo (Y. Chadwick 1816) - replace: Chamelaucium sp. Yalgoo (Y.Chadwick 1816) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Chrysopogon sp. Zuytdorp (G.J. Keighery & N. Gibson 906) - replace: Chrysopogon sp. Zuytdorp (G.J.Keighery & N.Gibson 906) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Comesperma sp. A Kimberley Flora (K.F. Kenneally 9242) - replace: Comesperma sp. A Kimberley Flora (K.F.Kenneally 9242) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia adenothalia - replace: Commersonia adenothalia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia bivillosa - replace: Commersonia bivillosa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia sp. Bindoon (C. Wilkins & F. & J. Hort CW 2155) - replace: Commersonia sp. Bindoon (C.Wilkins & F. & J.Hort CW 2155) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Commersonia sp. Mt Groper (R. Cranfield & D. Kabay 9157) - replace: Commersonia sp. Mount Groper (R.Cranfield & D.Kabay 9157) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Conostylis candicans var. xleptophylla - replace: Conostylis candicans var. x leptophylla - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Conostylis seorsiflora subsp. Nyabing - replace: Conostylis seorsiflora subsp. Nyabing (A.Coates s.n. 2/10/1998) - reason: Manual alignment with accepted name (E. Wenk, 2023-05-24) - taxonomic_resolution: species -- find: Corchorus sp. Fitzroy Crossing (A.J. Ewart s.n. PERTH 01526790) - replace: Corchorus sp. Fitzroy Crossing (A.J.Ewart s.n. PERTH 01526790) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Hamersley Range (S. van Leeuwen 3586) - replace: Corchorus sp. Hamersley Range (S.van Leeuwen 3586) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Yarrie (J. Bull & D. Roberts CAL 01.05) - replace: Corchorus sp. Yarrie (J.Bull & D.Roberts CAL 01.05) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Corymbia candida subsp. xlautifolia - replace: Corymbia candida subsp. x lautifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Corymbia xopacula - replace: Corymbia x opacula - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corymbia xpedimontana - replace: Corymbia x pedimontana - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Craspedia arenicola - replace: Craspedia arenicola MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Craspedia argillicola - replace: Craspedia argillicola MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Crocosmia xcrocosmiiflora - replace: Crocosmia x crocosmiiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Crotalaria sp. Chichester Tablelands (A.A. Mitchell PRP226) - replace: Crotalaria sp. Chichester Tablelands (A.A.Mitchell PRP226) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cucumis sp. Bunbury (G. Brayshaw s.n. 26/2/91) - replace: Cucumis sp. Bunbury (G.Brayshaw s.n. 26/2/91) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cyathostemon sp. Dowak (J.M. Fox 86/271) - replace: Cyathostemon sp. Dowak (J.M.Fox 86/271) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cyathostemon sp. Lake King (M.E. & M.E. Trudgen 1462) - replace: Cyathostemon sp. Lake King (M.E. & M.E.Trudgen 1462) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cyathostemon sp. Salmon Gums (B. Archer 769) - replace: Cyathostemon sp. Salmon Gums (B.Archer 769) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Cynanchum sp. Hamersley (M. Trudgen 2302) - replace: Cynanchum sp. Hamersley (M.Trudgen 2302) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera angulata subsp. Peak Charles - replace: Dampiera angulata subsp. Peak Charles (K.R.Newbey 5402) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Dampiera diversifolia de - replace: Dampiera diversifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera eriocephala de - replace: Dampiera eriocephala - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera haematotricha de - replace: Dampiera haematotricha - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Dampiera haematotricha de subsp. haematotricha - replace: Dampiera haematotricha subsp. haematotricha - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Dampiera lindleyi de - replace: Dampiera lindleyi - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera sp. Central Wheatbelt (L.W. Sage, F. Hort, C.A. Hollister LWS 2321) - replace: Dampiera sp. Central Wheatbelt (L.W.Sage, F.Hort, C.A.Hollister LWS2321) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera sp. Jurien (G. Lullfitz s.n. 10/7/1986) - replace: Dampiera sp. Jurien (G.Lullfitz s.n. 10/7/1986) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera sp. Wongan Hills (R.D. Royce 6637) - replace: Dampiera sp. Wongan Hills (R.D.Royce 6637) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dampiera trigona de - replace: Dampiera trigona - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Carnamah (J. Coleby-Williams 148) - replace: Darwinia sp. Carnamah (J.Coleby-Williams 148) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Chiddarcooping (S.D. Hopper 6944) - replace: Darwinia sp. Chiddarcooping (S.D.Hopper 6944) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Dryandra (G.J. Keighery 9295) - replace: Darwinia sp. Dryandra (G.J.Keighery 9295) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Gibson (R.D. Royce 3569) - replace: Darwinia sp. Gibson (R.D.Royce 3569) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Morawa (C.A. Gardner 2662) - replace: Darwinia sp. Morawa (C.A.Gardner 2662) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Baring (K.R. Newbey 9775) - replace: Darwinia sp. Mt Baring (K.R.Newbey 9775) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Burdett (N.G. Marchant 80/42) - replace: Darwinia sp. Mt Burdett (N.G.Marchant 80/42) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Ney (M.A. Burgman & S. McNee 1274) - replace: Darwinia sp. Mt Ney (M.A.Burgman & S.McNee 1274) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Ragged (S. Barrett 663) - replace: Darwinia sp. Mt Ragged (S.Barrett 663) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Mt Success (G.J. Keighery 2299) - replace: Darwinia sp. Mt Success (G.J.Keighery 2299) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Peak Charles (A.S. George 10627) - replace: Darwinia sp. Peak Charles (A.S.George 10627) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Ravensthorpe (G.J. Keighery 8030) - replace: Darwinia sp. Ravensthorpe (G.J.Keighery 8030) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Stirling Range (G.J. Keighery 5732) - replace: Darwinia sp. (Stirling Range) G.J.Keighery 5732 - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Thumb Peak (K.R. Newbey 4847) - replace: Darwinia sp. Thumb Peak (K.R.Newbey 4847) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Westdale (F. Hort 864) - replace: Darwinia sp. Westdale (F.Hort 864) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Williamson (G.J. Keighery 12717) - replace: Darwinia sp. Williamson (G.J.Keighery 12717) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia sp. Wyalgima Hill (L.W. Sage, J.P. Pigott & E.B. Pigott LWS1549) - replace: Darwinia sp. Wyalgima Hill (L.W.Sage, J.P.Pigott & E.B.Pigott LWS1549) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Darwinia thymoides subsp. bella - replace: Darwinia thymoides subsp. bella MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Darwinia thymoides subsp. thymoides - replace: Darwinia thymoides var. thymoides - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Daviesia euryloba - replace: Daviesia eurylobos - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicarpidium sp. A Kimberley Flora (K.F. Kenneally 8686) - replace: Dicarpidium sp. A Kimberley Flora (K.F.Kenneally 8686) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicarpidium sp. B Kimberley Flora (G.J. Keighery 10138) - replace: Dicarpidium sp. B Kimberley Flora (G.J.Keighery 10138) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicarpidium sp. Mt Leake (T. Willing 469) - replace: Dicarpidium sp. Mt Leake (T.Willing 469) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Cue (A.A. Mitchell 764) - replace: Dicrastylis sp. Cue (A.A.Mitchell 764) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Denham (M. Lewis 42/92) - replace: Dicrastylis sp. Denham (M.Lewis 42/92) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Peron Peninsula (M.E. Trudgen 7373) - replace: Dicrastylis sp. Peron Peninsula (M.E.Trudgen 7373) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Digitaria sp. Carson River (A.A. Mitchell 4387) - replace: Digitaria sp. Carson River (A.A.Mitchell 4387) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Capel (P.A. Jurjevich 1771) - replace: Dillwynia sp. Capel (P.A.Jurjevich 1771) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Coolgardie (V.E. Sands 637.3.1) - replace: Dillwynia sp. Coolgardie (V.E.Sands 637.3.1) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Coujinup Hill (M.A. Burgman 1560) - replace: Dillwynia sp. Coujinup Hill (M.A.Burgman 1560) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Northern Sandplains (M. Hislop 3278) - replace: Dillwynia sp. Northern Sandplains (M.Hislop 3278) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Diuris sp. Arrowsmith (K.W. Dixon 924) - replace: Diuris sp. Arrowsmith (K.W.Dixon 924) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Diuris sp. Eneabba (A.H. Burbidge 3941) - replace: Diuris sp. Eneabba (A.H.Burbidge 3941) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drosera xbadgerupii - replace: Drosera x badgerupii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drosera xsidjamesii - replace: Drosera x sidjamesii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drummondita rubroviridis - replace: Drummondita rubriviridis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drummondita sp. Trayning (A.M. George 97) - replace: Drummondita sp. Trayning (A.M.George 97) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Echinochloa crusgalli - replace: Echinochloa crus-galli - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eleocharis sp. A Kimberley Flora (W.V. Fitzgerald 1038) - replace: Eleocharis sp. A Kimberley Flora (W.V.Fitzgerald 1038) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eleocharis sp. B Kimberley Flora (K.F. Kenneally 8727) - replace: Eleocharis sp. B Kimberley Flora (K.F.Kenneally 8272) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Elythranthera xintermedia - replace: Elythranthera x intermedia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Enekbatus roseus - replace: Enekbatus roseus MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eragrostis sp. Mt Robinson (S. van Leeuwen 4109) - replace: Eragrostis sp. Mt Robinson (S.van Leeuwen 4109) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremaea violacea var. violacea - replace: Eremaea violacea subsp. violacea - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eremaea xcodonocarpa - replace: Eremaea x codonocarpa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremaea xphoenicea - replace: Eremaea x phoenicea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremophila sp. Mt Jackson (G.J. Keighery 4372) - replace: Eremophila sp. Mt Jackson (G.J.Keighery 4372) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremophila sp. long pedicels (G. Cockerton 1975) - replace: Eremophila sp. long pedicels (G.Cockerton 1975) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriachne armitii - replace: Eriachne armittii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriocaulon sp. C Kimberley Flora (G.J. Keighery 4610) - replace: Eriocaulon sp. C Kimberley Flora (G.J.Keighery 4610) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriocaulon sp. E Kimberley Flora (A.S. George 12635) - replace: Eriocaulon sp. E Kimberley Flora (A.S.George 12635) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eriocaulon sp. G Kimberley Flora (K.F. Kenneally 11374E) - replace: Eriocaulon sp. G Kimberley Flora (K.F.Kenneally 11374E) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eryngium ferox - replace: Eryngium ferox MS - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-21) - taxonomic_resolution: species -- find: Eryngium pinnatifidum subsp. minus - replace: Eryngium pinnatifidum subsp. minus MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eryngium pinnatifidum subsp. umbraphilum - replace: Eryngium pinnatifidum subsp. umbraphilum MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eryngium sp. Lake Muir (E. Wittwer 2293) - replace: Eryngium sp. Lake Muir (E.Wittwer 2293) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Erythrina xsykesii - replace: Erythrina x sykesii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus absita x loxophleba - replace: Eucalyptus absita x Eucalyptus loxophleba - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus aspersa x falcata - replace: Eucalyptus aspersa x Eucalyptus falcata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus balanopelex - replace: Eucalyptus x balanopelex - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x erectifolia - replace: Eucalyptus buprestium x Eucalyptus erectifolia - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x ligulata - replace: Eucalyptus buprestium x Eucalyptus ligulata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x marginata - replace: Eucalyptus buprestium x Eucalyptus marginata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x staeri - replace: Eucalyptus buprestium x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus dielsii x platypus - replace: Eucalyptus dielsii x Eucalyptus platypus - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus falcata subsp. falcata - replace: Eucalyptus falcata var. falcata - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Eucalyptus loxophleba x wandoo - replace: Eucalyptus loxophleba x Eucalyptus wandoo - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus macrocarpa x pyriformis - replace: Eucalyptus macrocarpa x Eucalyptus pyriformis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus marginata x megacarpa - replace: Eucalyptus marginata x Eucalyptus megacarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus marginata x pachyloma - replace: Eucalyptus marginata x Eucalyptus pachyloma - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus oldfieldii subsp. Millar Range - replace: Eucalyptus oldfieldii subsp. Millar Range (M.French 303) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Eucalyptus preissiana x staeri - replace: Eucalyptus preissiana x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus rhodantha var. xpetiolaris - replace: Eucalyptus rhodantha var. x petiolaris - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Eucalyptus sargentii subsp. onesia - replace: Eucalyptus sargentii subsp. onesis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eucalyptus sp. Esperance (M.E. French 1579) - replace: Eucalyptus sp. Esperance (M.E.French 1579) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Eyre (K. Hill & L.A.S. Johnson KH 2170) - replace: Eucalyptus sp. Eyre (K.Hill & L.A.S. Johnson KH 2170) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Fitzgerald River (M.I.H. Brooker 10923) - replace: Eucalyptus sp. Fitzgerald River (M.I.H.Brooker 10923) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Fraser Range (D. Nicolle 2157) - replace: Eucalyptus sp. Fraser Range (D.Nicolle 2157) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. H Kimberley Flora (S.J. Forbes 2560) - replace: Eucalyptus sp. H Kimberley Flora (S.G.Forbes 2560) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Marvel Loch (D. Nicolle & M. French DN 4794) - replace: Eucalyptus sp. Marvel Loch (D.Nicolle & M.French DN 4794) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Ravensthorpe (A.S. George 616) Southern Red Mallee - replace: Eucalyptus sp. Ravensthorpe (A.S.George 616) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Truslove (M.I.H. Brooker 7499) - replace: Eucalyptus sp. Truslove (M.I.H.Brooker 7499) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus sp. Wagerup (L. Johnson 9127 & B. Briggs) - replace: Eucalyptus sp. Wagerup (L.Johnson 9127 & B.Briggs) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbalanites - replace: Eucalyptus x balanites - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbennettiae - replace: Eucalyptus x bennettiae - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbrachyphylla - replace: Eucalyptus x brachyphylla - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xcarnabyi - replace: Eucalyptus x carnabyi - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xchrysantha - replace: Eucalyptus x chrysantha - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xerectifolia - replace: Eucalyptus erectifolia - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xerythrandra - replace: Eucalyptus x erythrandra - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus ximpensa - replace: Eucalyptus x impensa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xkalganensis - replace: Eucalyptus x kalganensis - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xlateritica - replace: Eucalyptus x lateritica - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xmissilis - replace: Eucalyptus x missilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xmundijongensis - replace: Eucalyptus x mundijongensis - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xphylacis - replace: Eucalyptus x phylacis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xstoataptera - replace: Eucalyptus x stoataptera - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xtetragona - replace: Eucalyptus x tetragona - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Euphorbia drummondii subsp. drummondii - replace: Euphorbia drummondii var. drummondii - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Euphorbia sp. B Kimberley Flora (B.J. Carter 629) - replace: Euphorbia sp. B Kimberley Flora (B.J.Carter 629) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eutaxia epacridoides subsp. sparsifolia - replace: Eutaxia epacridoides subsp. sparsifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. hirsuta - replace: Eutaxia neurocalyx subsp. hirsuta MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. leptophylla - replace: Eutaxia neurocalyx subsp. leptophylla MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. major - replace: Eutaxia neurocalyx subsp. major MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Eutaxia sp. Jasper Hill (R.J. Cranfield 8607) - replace: Eutaxia sp. Jasper Hill (R.J.Cranfield 8607) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eutaxia sp. North Ironcap (P. Armstrong PA 06/898) - replace: Eutaxia sp. North Ironcap (P.Armstrong et al. 06/898) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. A Kimberley Flora (A.S. George 13584) - replace: Fimbristylis sp. A Kimberley Flora (A.S.George 13584) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. B Kimberley Flora (K.A. Menkhorst 767) - replace: Fimbristylis sp. B Kimberley Flora (K.A.Menkhorst 767) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. C Kimberley Flora (T.G. Hartley 14511) - replace: Fimbristylis sp. C Kimberley Flora (T.G.Hartley 14511) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. D Kimberley Flora (A.C. Beauglehole 52448) - replace: Fimbristylis sp. D Kimberley Flora (A.C.Beauglehole 52448) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. E Kimberley Flora (C.R. Dunlop 5403) - replace: Fimbristylis sp. E Kimberley Flora (C.R.Dunlop 5403) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. F Kimberley Flora (A.S. George 13789) - replace: Fimbristylis sp. F Kimberley Flora (A.S.George 13789) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. G Kimberley Flora (A.C. Beauglehole 51810) - replace: Fimbristylis sp. G Kimberley Flora (A.C.Beauglehole 51810) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. I Kimberley Flora (R.J. Hnatiuk 112) - replace: Fimbristylis sp. I Kimberley Flora (R.J.Hnatiuk 112) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. K Kimberley Flora (E. Langfield 40) - replace: Fimbristylis sp. K Kimberley Flora (E.Langfield 40) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. L Kimberley Flora (K.F. Kenneally 11167) - replace: Fimbristylis sp. L Kimberley Flora (K.F.Kenneally 11167) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Fimbristylis sp. Shay Gap (K.R. Newbey 10293) - replace: Fimbristylis sp. Shay Gap (K.R.Newby 10293) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Freesia alba x leichtlinii - replace: Freesia alba x Freesia leichtlinii - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Freesia alba x leichtlinii - replace: Freesia alba x Freesia leichtlinii - reason: Manual alignment with accepted name (E. Wenk, 2023-05-24) - taxonomic_resolution: species -- find: Gahnia sp. Headland (G.J. Keighery 8501) - replace: Gahnia sp. Headland (G.J.Keighery 8501) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gahnia sp. L (K.R. Newbey 7888) - replace: Gahnia sp. L (K.R.Newbey 7888) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gahnia sp. dull bases (K.R. Newbey 5111) - replace: Gahnia sp. dull bases (K.R.Newbey 5111) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium sp. East Peak (E.D. Middleton EDM 43) - replace: Gastrolobium sp. East Peak (E.D.Middleton EDM 43) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium sp. Harvey (G.J. Keighery 16821) - replace: Gastrolobium sp. Harvey (G.J.Keighery 16821) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium sp. Prostrate Boddington (M. Hislop 2130) - replace: Gastrolobium sp. Prostrate Boddington (M.Hislop 2130) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gastrolobium wonganense - replace: Gastrolobium wonganensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A. Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A.Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Marchagee (A. Crawford ADC 1353) - replace: Geleznowia sp. Marchagee (A.Crawford ADC 1353) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia verrucosa subsp. Kalbarri - replace: Geleznowia verrucosa subsp. Kalbarri (L.M.Broadhurst 123) L.M.Broadh. - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Genus sp. Hamersley Range hilltops (S. van Leeuwen 4345) - replace: Genus sp. Hamersley Range hilltops (S.van Leeuwen 4345) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Genus sp. Nillup (R.D. Royce 98) - replace: Genus sp. Nillup (R.D.Royce 98) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Glycine aphyonota - replace: Glycine aphyonotos - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Glycine lactovirens - replace: Glycine lactivirens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Billabong (B. Nordenstam & A. Anderberg 203) - replace: Gnephosis sp. Billabong (B.Nordenstam & A.Anderberg 203) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Norseman (K.R. Newbey 8096) - replace: Gnephosis sp. Norseman (K.R.Newbey 8096) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Pt Quobba (P.G. Wilson 12622) - replace: Gnephosis sp. Pt Quobba (P.G.Wilson 12622) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gompholobium sp. Stirling Range (C.F. Wilkins et al. CW 2513) - replace: Gompholobium sp. Stirling Range (C.F.Wilkins et al. CW 2513) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gomphrena sp. Belele (D.W. Goodall 3215) - replace: Gomphrena sp. Belele (D.W.Goodall 3215) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gomphrena sp. Maret Islands (A.A. Mitchell 5414) - replace: Gomphrena sp. Maret Islands (A.A.Mitchell 5414) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia affinis de - replace: Goodenia affinis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia pinifolia de - replace: Goodenia pinifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia pulchella subsp. Coastal Plain A - replace: Goodenia pulchella subsp. Coastal Plain A (M.Hislop 634) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Coastal Plain B - replace: Goodenia pulchella subsp. Coastal Plain B (L.W.Sage 2336) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Dragon Rocks - replace: Goodenia pulchella subsp. Dragon Rocks (A.M.Coates 3374) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Mt Barker - replace: Goodenia pulchella subsp. Mt Barker (K.F.Kenneally 1166) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Wheatbelt - replace: Goodenia pulchella subsp. Wheatbelt (L.W.Sage & F.Hort 795) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Goodenia sp. Bachsten Creek (M.D. Barrett 685) - replace: Goodenia sp. Bachsten Creek (M.D.Barrett 685) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Beyondie (L.W. Sage & S. van Leeuwen LWS 2518) - replace: Goodenia sp. Beyondie (L.W.Sage & S.J.van Leeuwen LWS 2518) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Carnarvon Range (D.J. Edinger Nats 30) - replace: Goodenia sp. Carnarvon Range (D.J.Edinger Nats 30) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Dampier Peninsula (B.J. Carter 675) - replace: Goodenia sp. Dampier Peninsula (B.J.Carter 675) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Little Sandy Desert (A.S. Mitchell 989) - replace: Goodenia sp. Little Sandy Desert (A.S.Mitchell 989) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Mount Bomford (M.D. Barrett 423) - replace: Goodenia sp. Mount Bomford (M.D.Barrett 423) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Mt Elvire (D.J. Edinger 1857) - replace: Goodenia sp. Mt Elvire (D.J.Edinger 1857) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. South Coast (A.R. Annels ARA 1846) - replace: Goodenia sp. South Coast (A.R.Annels 1846) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Stirling Range (R. Cranfield & D. Kabay 9148) - replace: Goodenia sp. Stirling Range (R.Cranfield & D.Kabay 9148) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia xanthotricha de - replace: Goodenia xanthotricha - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grammosolen sp. Mt Ridley (W.R. Archer 1210911) - replace: Grammosolen sp. Mt Ridley (W.R.Archer 1210911) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grevillea bronwenae - replace: Grevillea bronweniae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Gunapin (F. Hort 308) - replace: Grevillea sp. Gunapin (F.Hort 308) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Stirling Range (D.J. McGillivray 3488 & A.S. George) - replace: Grevillea sp. Stirling Range (D.J.McGillivray 3488 & A.S.George) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Grevillea sp. Victoria Desert (R. Davis et al. RD 11611) - replace: Grevillea sp. Victoria Desert (R.Davis et al. RD 11611) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Yerilgee Hills (T. Laslett TL 025) - replace: Grevillea sp. Yerilgee Hills (T.Laslett TL 025) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea squiresae - replace: Grevillea squiresiae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Guichenotia basivirida - replace: Guichenotia basiviridis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gunniopsis sp. Nuytsland (G.J. Keighery & J.J. Alford 522) - replace: Gunniopsis sp. Nuytsland (G.J.Keighery & J.J.Alford 522) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gyrostemon sp. Whoogarup Range (A.S. George 1910) - replace: Gyrostemon sp. Whoogarup Range (A.S.George 1910) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Haemodorum sp. A Kimberley Flora (K.F. Kenneally 8639) - replace: Haemodorum sp. A Kimberley Flora (K.F.Kenneally 8639) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea cygna - replace: Hakea cygnus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea cygna subsp. needlei - replace: Hakea cygnus subsp. needlei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Hakea sp. Great Victoria Desert (L. Cockram LAC 139) - replace: Hakea sp. Great Victoria Desert (L.Cockram LAC 139) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (B. Keighery 2599) - replace: Hakea sp. Walyunga (B.Keighery 2599) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (L. Penn s.n.) - replace: Hakea sp. Walyunga (L.Penn s.n.) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Yalgorup (B.J. Keighery & N. Gibson 897) - replace: Hakea sp. Yalgorup (B.J.Keighery & N.Gibson 897) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halgania sp. A Kimberley Flora (H.A. Johnson 5123) - replace: Halgania sp. A Kimberley Flora (H.A.Johnson 5123) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halgania sp. Peak Eleanora (M.A. Burgman 3547 B) - replace: Halgania sp. Peak Eleanora (M.A.Burgman 3547 B) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halgania sp. Wongan Hills (K.F. Kenneally 2393) - replace: Halgania sp. Wongan Hills (K.F.Kenneally 2393) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Halosarcia halocnemoides subsp. Lake Grace - replace: Halosarcia halocnemoides subsp. Lake Grace ( N.Casson G231.10) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Halosarcia sp. Lake Moore (M.N. Lyons 2603) - replace: Halosarcia sp. Lake Moore (M.N.Lyons 2603) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Harmsiodoxa sp. Eremaean (A.S. George 3894) - replace: Harmsiodoxa sp. Eremaean (A.S.George 3894) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Bachsten Creek (R.L. Barrett & M.D. Barrett RLB 3808) - replace: Helicteres sp. Bachsten Creek (R.L.Barrett & M.D.Barrett RLB 3808) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Carson River (I. Cowie & Wendell IC 4232) - replace: Helicteres sp. Carson River (I.Cowie & Wendell IC 4232) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Manning Peak (K.F. Kenneally 10266 & B.P.M. Hyland) - replace: Helicteres sp. Manning Peak (K.F.Kenneally 10266 & B.P.M.Hyland) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mertens Falls (K.F. Kenneally 7887) - replace: Helicteres sp. Mertens Falls (K.F.Kenneally 7887) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mt Shadforth (I.R. Telford 11609) - replace: Helicteres sp. Mt Shadforth (I.R.Telford 11609) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemiandra sp. Eneabba (H. Demarz 3687) - replace: Hemiandra sp. Eneabba (H.Demarz 3687) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Arrino (J.J. Alford 1175) - replace: Hemigenia sp. Arrino (J.J.Alford 1175) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Cue (K.F. Kenneally 47A) - replace: Hemigenia sp. Cue (K.F.Kenneally 47A) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Dalwallinu (W.E. Blackall 2870) - replace: Hemigenia sp. Dalwallinu (W.E.Blackall 2870) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Edah (J.W. Green 1601) - replace: Hemigenia sp. Edah (J. W.Green 1601) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Gibson (R. Coveny 7893 & B.R. Maslin) - replace: Hemigenia sp. Gibson (R.Coveny 7893 & B.R.Maslin) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Glenburgh (R.J. Cranfield 9725) - replace: Hemigenia sp. Glenburgh (R.J.Cranfield 9725) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Jibberding (J. D'Alonzo 418) - replace: Hemigenia sp. Jibberding (J.D'Alonzo 418) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Merredin (M. Koch 2959) - replace: Hemigenia sp. Merredin (M.Koch 2959) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Newdegate (E. Bishop 75) - replace: Hemigenia sp. Newdegate (E.Bishop 75) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Paynes Find (A.C. Beauglehole 49138) - replace: Hemigenia sp. Paynes Find (A.C.Beauglehole 49138) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Pindar (H. Demarz 7428) - replace: Hemigenia sp. Pindar (H.Demarz 7428) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Tallering (H. Pringle 3323) - replace: Hemigenia sp. Tallering (H.Pringle 3323) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Wilroy (B.J. Conn 2150) - replace: Hemigenia sp. Wilroy (B.J.Conn 2150) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Yalgoo (A.M. Ashby 2624) - replace: Hemigenia sp. Yalgoo (A.M.Ashby 2624) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. Yuna (A.C. Burns 95) - replace: Hemigenia sp. Yuna (A.C.Burns 95) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hemigenia sp. major (C.A. Gardner 2677) - replace: Hemigenia sp. major (C.A.Gardner 2677) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibbertia sp. A Kimberley Flora (T.E.H. Aplin et al. 898) - replace: Hibbertia sp. A Kimberley Flora (T.E.H.Aplin et al. 898) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hibbertia sp. Kojonup (C.M. Lewis 288) - replace: Hibbertia sp. Kojonup (C.M.Lewis 288) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibbertia sp. Tathra (M.A. Langley & J.M. Harvey 1873) - replace: Hibbertia sp. Tathra (M.A.Langley & J.M.Harvey 1873) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. A Kimberley Flora (E.A. Chesterfield 310) - replace: Hibiscus sp. A Kimberley Flora (E.A.Chestfield 310) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. B Kimberley Flora (P.G. Wilson 11143) - replace: Hibiscus sp. B Kimberley Flora (P.G.Wilson 11143) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Canga (P.J.H. Hurter & J. Naaykens 11013) - replace: Hibiscus sp. Canga (P.J.H.Hurter & J.Naaykens 11013) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Brockman (E. Thoma ET 1354) - replace: Hibiscus sp. Mt Brockman (E.Thoma ET 1354) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Robinson (G. Byrne 3537) - replace: Hibiscus sp. Mt Robinson (G.Byrne 3537) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Theda (M.D. Barrett & R.L. Barrett MDB 2144) - replace: Hibiscus sp. Theda (M.D.Barrett & R.L.Barrett MDB 2144) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Wonganoo Station (K. Boladeras 125) - replace: Hibiscus sp. Wonganoo Station (K.Boladeras 125) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydatella sp. Austin Bay (N. Gibson & M. Lyons 2387) - replace: Hydatella sp. Austin Bay (N.Gibson & M.Lyons 2387) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle coorowensis - replace: Hydrocotyle coorowensis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle coraginaensis - replace: Hydrocotyle coraginaensis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle crassipes - replace: Hydrocotyle crassipes MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle decipiens - replace: Hydrocotyle decipiens MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle hexaptera - replace: Hydrocotyle hexaptera MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle sp. Truslove (M.A. Burgman 4419) - replace: Hydrocotyle sp. Truslove (M.A.Burgman 4419) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle sp. Warriedar (P.G. Wilson 12267) - replace: Hydrocotyle sp. Warriedar (P.G.Wilson 12267) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle vigintimilia - replace: Hydrocotyle vigintimilia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hypocalymma sp. Cascade (R. Bruhn 20896) - replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hypocalymma sp. Cataby (G.J. Keighery 5151) - replace: Hypocalymma sp. Cataby (G.J.Keighery 5151) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hypoxis sp. Prince Regent River (M.D. Barrett 924 B) - replace: Hypoxis sp. Prince Regent River (M.D.Barrett 924 B) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera mackinlayi - replace: Indigofera mckinlayi - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. A Kimberley Flora (G.J. Keighery & N. Gibson 70) - replace: Indigofera sp. A Kimberley Flora (G.J.Keighery & N.Gibson 70) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Bungaroo Creek (S. van Leeuwen 4301) - replace: Indigofera sp. Bungaroo Creek (S.van Leeuwen 4301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Mackinlayi (A.A. Mitchell 7086) - replace: Indigofera sp. Mackinlayi (A.A.Mitchell 7086) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Warburton (A.A. Munir 5209) - replace: Indigofera sp. Warburton (A.A.Munir 5209) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ipomoea sp. A Kimberley Flora (L.J. Penn 84) - replace: Ipomoea sp. A Kimberley Flora (L.J.Pen 84) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ipomoea sp. Kalumburu (A.A. Mitchell 3869B) - replace: Ipomoea sp. Kalumburu (A.A.Mitchell 3869B) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Canning Reservoir (M.D. Tindale 121 & B.R. Maslin) - replace: Isopogon sp. Canning Reservoir (M.D.Tindale 121 & B.R.Maslin) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Darling Range (F. Hort 1662) - replace: Isopogon sp. Darling Range (F.Hort 1662) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Fitzgerald River (D.B. Foreman 813) - replace: Isopogon sp. Fitzgerald River (D.B.Foreman 813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Ravensthorpe (D.B. Foreman 1207) - replace: Isopogon sp. Ravensthorpe (D.B.Foreman 1207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Watheroo (D. Foreman 477) - replace: Isopogon sp. Watheroo (D.Foreman 477) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Isotoma hypocrateriformis var. cristata - replace: Isotoma hypocrateriformis var. cristata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Isotropis sp. Arid zone (G. Byrne 2775) - replace: Isotropis iophyta - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Isotropis sp. Shark Bay (M.E. Trudgen 7170) - replace: Isotropis sp. Shark Bay (M.E.Trudgen 7170) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isotropis sp. Yalgoo (S. Patrick 2375) - replace: Isotropis petrensis - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Jasminum sp. Exmouth (G. Marsh 77) - replace: Jasminum sp. Exmouth (G.Marsh 77) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Josephinia sp. Marandoo (M.E. Trudgen 1554) - replace: Josephinia sp. Marandoo (M.E.Trudgen 1554) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Josephinia sp. Mt Edgar Station (N.T. Burbidge 1194) - replace: Josephinia sp. Mt Edgar Station (N.T.Burbidge 1194) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Kennedia sp. South coast (T.R. Lally 1576 & I.P. Lally) - replace: Kennedia sp. south coast (T.R.Lally 1576 & I.P.Lally) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia adenogyna - replace: Keraudrenia adenogyna MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. cacaobrunnea ms - replace: Keraudrenia cacaobrunnea MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. undulata - replace: Keraudrenia cacaobrunnea subsp. undulata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Keraudrenia saxatilis - replace: Keraudrenia saxatilis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia velutina subsp. elliptica - replace: Keraudrenia velutina subsp. elliptica MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Keraudrenia velutina subsp. velutina - replace: Keraudrenia velutina - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Lambertia orbifolia subsp. Scott River Plains - replace: Lambertia orbifolia subsp. Scott River Plains (L.W.Sage 684) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Lasiopetalum leucogriseum - replace: Lasiopetalum leucogriseum MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Badgingarra (E.A. Griffin 5278) - replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E. Ried 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E.Reid 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Denmark (B.G. Hammersley 2012) - replace: Lasiopetalum sp. Denmark (B.G.Hammersley 2012) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Desmond (N. McQuoid 653) - replace: Lasiopetalum sp. Desmond (N.McQuoid 653) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Hill River (T.N. Stoate 5) - replace: Lasiopetalum sp. Hill River (T.N.Stoate 5) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Kukerin (C.A. Gardner 13646) - replace: Lasiopetalum sp. Kukerin (C.A.Gardner 13646) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Caroline (S.D. Hopper SDH 6381) - replace: Lasiopetalum sp. Mount Caroline (S.D.Hopper SDH 6381) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Lesueur (E.A. Griffin 1997) - replace: Lasiopetalum sp. Mount Lesueur (E.A.Griffin 1997) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mt Ragged (T.E.H. Aplin 4349) - replace: Lasiopetalum sp. Mt Ragged (T.E.H.Aplin 4349) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Northam (F. Hort 1196) - replace: Lasiopetalum sp. Northam (F.Hort 1196) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Toodyay (F. Hort 2689) - replace: Lasiopetalum sp. Toodyay (F.Hort 2689) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Watheroo (K. Shepherd & C. Wilkins KS 220) - replace: Lasiopetalum erectifolium - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Weam Reserve (M. Hislop 2755) - replace: Lasiopetalum sp. Weam Reserve (M.Hislop 2755) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Latrobea pinnacula - replace: Latrobea pinnaculum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Latrobea sp. South Coast (A.M. Ashby 1949) - replace: Latrobea sp. South Coast (A.M.Ashby 1949) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lawrencia sp. Anna Plains (N.T. Burbidge 1433) - replace: Lawrencia sp. Anna Plains (N.T.Burbidge 1433) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Lechenaultia formosa subsp. Wheatbelt - replace: Lechenaultia formosa subsp. 'Wheatbelt' (R.J.Cranfield 4718) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Lepidobolus preissianus subsp. arcuatus - replace: Lepidobolus preissianus subsp. 'arcuatus' - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Lepidosperma sp. A2 Island Flat (G.J. Keighery 7000) - replace: Lepidosperma sp. A2 Island Flat (G.J.Keighery 7000) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. Giant Terete Culms (S.D. Hopper 8631) - replace: Lepidosperma sp. Giant Terete Culms (S.D.Hopper 8631) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. K Boorabbin (K.L. Wilson 2579) - replace: Lepidosperma sp. K Boorabbin (K.L.Wilson 2579) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. P1 small head (M.D. Tindale 166A) - replace: Lepidosperma sp. P1 small head (M.D.Tindale 166A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. U1 big heads (A.S. George 11294) - replace: Lepidosperma sp. U1 big heads (A.S.George 11294) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lepidosperma sp. Z dark sheath (P.G. Wilson 10177) - replace: Lepidosperma sp. Z dark sheath (P.G.Wilson 10177) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leptosema cervicorne - replace: Leptosema cervicornu - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leptospermum sp. Peak Charles/Norseman (K.R. Newbey 5243) - replace: Leptospermum sp. Peak Charles/Norseman (K.R.Newbey 5243) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Leucanthemum xsuperbum - replace: Leucanthemum x superbum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon compressicarpus - replace: Leucopogon compressicarpus MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon inflexifolius - replace: Leucopogon inflexifolius MS - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Badgingarra (R. Davis 421) - replace: Leucopogon sp. Badgingarra (R.Davis 421) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Barren Range (A.S. George 10092) - replace: Leucopogon sp. Barren Range (A.S.George 10092) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bifid Eneabba (M. Hislop 1927) - replace: Leucopogon sp. Bifid Eneabba (M.Hislop 1927) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bindoon (F. Hort 2766) - replace: Leucopogon sp. Bindoon (F.Hort 2766) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bonnie Hill (K.R. Newbey 9831) - replace: Leucopogon sp. Bonnie Hill (K.R.Newbey 9831) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Boyagin (M. Hislop 2825) - replace: Leucopogon sp. Boyagin (M.Hislop 2825) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bremer Bay (K.R. Newbey 4667) - replace: Leucopogon sp. Bremer Bay (K.R.Newbey 4667) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Brookton (K. Kershaw & L. Kerrigan KK 2192) - replace: Leucopogon sp. Brookton (K.Kershaw & L.Kerrigan KK2192) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Bungulla (R.D. Royce 3435) - replace: Leucopogon sp. Bungulla (R.D.Royce 3435) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Cape Arid (M. Paxman 50) - replace: Leucopogon sp. Cape Arid (M.Paxman 50) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Clyde Hill (M.A. Burgman 1207) - replace: Leucopogon sp. Clyde Hill (M.A.Burgman 1207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Coolgardie (M. Hislop & F. Hort MH 3197) - replace: Leucopogon sp. Coolgardie (M.Hislop & F.Hort MH3197) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Corrigin (K. Kershaw KK 2091) - replace: Leucopogon sp. Corrigin (K.Kershaw KK 2091) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Coujinup (M.A. Burgman 1085) - replace: Leucopogon sp. Coujinup (M.A.Burgman 1085) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Darradup (R.D. Royce 2998) - replace: Leucopogon sp. Darradup (R.D.Royce 2998) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Denmark (J.M. Powell 1167) - replace: Leucopogon sp. Denmark (J.M.Powell 1167) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Flynn (F. Hort, J. Hort & A. Lowrie 859) - replace: Leucopogon sp. Flynn (F.Hort, J.Hort & A.Lowrie 859) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Gunapin (F. Hort 808) - replace: Leucopogon sp. Gunapin (F.Hort 808) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Howatharra (D. & N. McFarland 1046) - replace: Leucopogon sp. Howatharra (D. & N.McFarland 1046) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Ironcaps (N. Gibson & K. Brown 3070) - replace: Leucopogon sp. Ironcaps (N.Gibson & K.Brown 3070) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Kalbarri (J.M. Powell 1695) - replace: Leucopogon sp. Kalbarri (J.M.Powell 1695) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Kau Rock (M.A. Burgman 1126) - replace: Leucopogon sp. Kau Rock (M.A.Burgman 1126) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Lake King (A.J.G. Wilson 65) - replace: Leucopogon sp. Lake King (A.J.G.Wilson 65) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Lesueur (B. Evans 530) - replace: Leucopogon sp. Lesueur (B.Evans 530) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Lort River (M. Golding 3) - replace: Leucopogon sp. Lort River (M.Golding 3) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Margaret River (J. Scott 207) - replace: Leucopogon sp. Margaret River (J.Scott 207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Mid West (J.S. Beard 7388) - replace: Leucopogon sp. Mid West (J.S.Beard 7388) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Moore River (M. Hislop 1695) - replace: Leucopogon sp. Moore River (M.Hislop 1695) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Moresby Range (S. Patrick 2614) - replace: Leucopogon sp. Moresby Range (S.Patrick 2614) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Mount Heywood (M.A. Burgman 1211) - replace: Leucopogon sp. Mount Heywood (M.A.Burgman 1211) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Murdoch (M. Hislop 1037) - replace: Leucopogon sp. Murdoch (M.Hislop 1037) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Ongerup (A.S. George 16682) - replace: Leucopogon sp. Ongerup (A.S.George 16682) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Pingrup (W.E. Blackall 3010) - replace: Leucopogon sp. Pingrup (W.E.Blackall 3010) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Roberts Swamp (K.R. Newbey 8173) - replace: Leucopogon sp. Roberts Swamp (K.R.Newbey 8173) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Salt Lake (G.F. Craig 3069) - replace: Leucopogon sp. Salt Lake (G.F.Craig 3069) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. South Coast (K.R. Newbey 8213) - replace: Leucopogon sp. South Coast (K.R.Newbey 8213) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Southern Granite (E.D. Middleton EDM 266) - replace: Leucopogon sp. Southern Granite (E.D.Middleton EDM 266) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Twertup (K.R. Newbey 10859) - replace: Leucopogon sp. Twertup (K.Newbey 10859) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Walpole (R.J. Cranfield 10940) - replace: Leucopogon sp. Walpole (R.J.Cranfield 10940) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Wandering (F. Hort 419) - replace: Leucopogon sp. Wandering (F.Hort 419) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Warradarge (M. Hislop 1908) - replace: Leucopogon sp. Warradarge (M.Hislop 1908) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Wheatbelt (S. Murray 257) - replace: Leucopogon sp. Wheatbelt (S.Murray 257) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Whicher Range (G.J. Keighery 11763) - replace: Leucopogon sp. Whicher Range (G.J.Keighery 11763) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Windy Harbour (A. Strid 21460) - replace: Leucopogon sp. Windy Harbour (A.Strid 21460) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Yanchep (M. Hislop 1986) - replace: Leucopogon sp. Yanchep (M.Hislop 1986) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. Yanneymooning (F. Mollemans 3797) - replace: Leucopogon sp. Yanneymooning (F.Mollemans 3797) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. ciliate Eneabba (F. Obbens & C. Godden s.n. 3/7/2003) - replace: Leucopogon sp. ciliate Eneabba (F.Obbens & C.Godden s.n. 3/7/2003) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Leucopogon sp. outer wheatbelt (M. Hislop 30) - replace: Leucopogon sp. outer wheatbelt (M.Hislop 30) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lobelia rhombifolia de - replace: Lobelia rhombifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lolium perenne x rigidum - replace: Lolium perenne subsp. rigidum - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Lolium xhubbardii - replace: Lolium x hubbardii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lysinema ciliatum forma - replace: Lysinema ciliatum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Maireana sp. Patience (C.P. Campbell 1052) - replace: Maireana sp. Patience (C.P.Campbell 1052) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Adelong (G.J. Keighery 11825) - replace: Malleostemon sp. Adelong (G.J.Keighery 11825) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Cooljarloo (B. Backhouse s.n. 16/11/88) - replace: Malleostemon sp. Cooljarloo (B.Backhouse s.n. 16/11/88) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Cooloomia (S.D. Hopper 1353) - replace: Malleostemon sp. Cooloomia (S.D.Hopper 1353) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Erangy Springs (M.E. Trudgen 12030) - replace: Malleostemon sp. Erangy Springs (M.E.Trudgen 12030) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Hardabutt Rapids (D. Bellairs 1654A) - replace: Malleostemon sp. Hardabutt Rapids (D.Bellairs 1654A) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Kalbarri (L.A. Craven 7083) - replace: Malleostemon sp. Kalbarri (L.A.Craven 7083) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Moonyoonooka (R.J. Cranfield 2947) - replace: Malleostemon sp. Moonyoonooka (R.J.Cranfield 2947) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Mullewa (P. Winson B7365) - replace: Malleostemon sp. Mullewa (P.Winson B7365) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Nerren Nerren (A. Payne 360) - replace: Malleostemon sp. Nerren Nerren (A.Payne 360) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Officer Basin (D. Pearson 350) - replace: Malleostemon sp. Officer Basin (D.Pearson 350) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Woolgorong Station (M. Officer 100) - replace: Malleostemon sp. Woolgorong Station (M.Officer 100) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Malleostemon sp. Yerina (S.J. Patrick 2728) - replace: Malleostemon sp. Yerina (S.J.Patrick 2728) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Marianthus sp. Bremer (N. Gibson & M. Lyons 1776) - replace: Marianthus sp. Bremer (N.Gibson & M.Lyons 1776) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Maytenus sp. Mt Windell (S. van Leeuwen 846) - replace: Maytenus sp. Mt Windell (S.van Leeuwen 846) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Melaleuca sp. Dongolocking (G.J. Keighery & N. Gibson 2896) - replace: Melaleuca sp. Dongolocking (G.J.Keighery & N.Gibson 2896) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Melaleuca sp. Gorse (A.S. George 7224) - replace: Melaleuca sp. Gorse (A.S.George 7224) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Melaleuca xarenicola - replace: Melaleuca x arenicola - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mentha xpiperita - replace: Mentha x piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mentha xpiperita var. citrata - replace: Mentha x piperita var. citrata - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Mentha xpiperita var. piperita - replace: Mentha x piperita var. piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Merremia sp. B Kimberley Flora (B.J. Carter 533) - replace: Merremia sp. B Kimberley Flora (B.J.Carter 533) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Boxwood (K.R. Newbey 4200) - replace: Microcorys sp. Boxwood (K.R.Newbey 4200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Coomallo (L. Haegi 2677) - replace: Microcorys sp. Coomallo (L.Haegi 2677) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Forrestania (V. English 2004) - replace: Microcorys sp. Forrestiana (V.English 2004) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Mt Gibson (S. Patrick 2098) - replace: Microcorys sp. Mt Gibson (S.Patrick 2098) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. Tarin Rock (E.J. Croxford 5251) - replace: Microcorys sp. Tarin Rock (E.J.Croxford 5251) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Microcorys sp. stellate (A. Strid 21885) - replace: Microcorys sp. stellate (A.Strid 21885) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Micromyrtus racemosa var. Jingemarra - replace: Micromyrtus racemosa var. Jingemarra (R.J.Cranfield 5253a) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Micromyrtus triptycha subsp. elata - replace: Micromyrtus triptycha subsp. elata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Micromyrtus triptycha subsp. longiflora - replace: Micromyrtus triptycha subsp. longiflora MS - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Micromyrtus uniovula - replace: Micromyrtus uniovulum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia bursarioides - replace: Mirbelia bursarioides MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia cordifolia - replace: Mirbelia cordifolia MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia magentea - replace: Mirbelia magentea MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Bursarioides (T.R. Lally 760) - replace: Mirbelia sp. Bursarioides (T.R.Lally 760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Carnarvon (J.S. Beard 6008) - replace: Mirbelia sp. Carnarvon (J.S.Beard 6008) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Denham (W.E. Blackall 556) - replace: Mirbelia sp. Denham (W.E.Blackall 556) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Helena & Aurora (B.J. Lepschi 2003) - replace: Mirbelia sp. Helena & Aurora (B.J.Lepschi 2003) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Kalbarri (M.D. Crisp 6261) - replace: Mirbelia sp. Kalbarri (M.D.Crisp 6261) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Magentea (T.E.H. Aplin 5976) - replace: Mirbelia sp. Magentea (T.E.H.Aplin 5976) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Mt Heywood (T.E.H. Aplin 4154) - replace: Mirbelia sp. Mt Heywood (T.E.H.Aplin 4154) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Ternata (M.D. Crisp & L.G. Cook MDC 9267) - replace: Mirbelia sp. Ternata (M.D.Crisp & L.G.Cook MDC 9267) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Zuytdorp (G.J. Keighery & N. Gibson 1688) - replace: Mirbelia sp. Zuytdorp (G.J.Keighery & N.Gibson 1688) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. hooked keel (M.D. Crisp 8519 & W. Keys) - replace: Mirbelia sp. hooked keel (M.D.Crisp 8519 & W.Keys) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mukia sp. A Kimberley Flora (K.F. Kenneally 7909) - replace: Mukia sp. A Kimberley Flora (K.F.Kenneally 7909) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mukia sp. D Flora of Australia (A.A. Mitchell PRP 1121) - replace: Mukia sp. D Flora of Australia (A.A.Mitchell PRP 1121) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Oldenlandia sp. Hamersley Station (A.A. Mitchell PRP 1479) - replace: Oldenlandia sp. Hamersley Station (A.A.Mitchell PRP 1479) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Olearia brachyglossa - replace: Olearia brachyglossa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Olearia dampieri - replace: Olearia dampieri MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Olearia dampieri subsp. eremicola - replace: Olearia dampieri subsp. eremicola MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Ornithogalum longebracteatum - replace: Ornithogalum longibracteatum - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Otion microphyllum - replace: Otion microphyllum MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Otion simplicifolium - replace: Otion simplicifolium MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Otion tortile - replace: Otion tortile MS - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-21) - taxonomic_resolution: species -- find: Pelargonium australe subsp. australe ms - replace: Pelargonium australe var. australe - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Pelargonium australe subsp. drummondii - replace: Pelargonium australe subsp. drummondii MS - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Pelargonium xasperum - replace: Pelargonium x asperum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pelargonium xdomesticum - replace: Pelargonium x domesticum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pentalepis sp. Mt House (E.M. Bennett 1877) - replace: Pentalepis sp. Mt House (E.M.Bennett 1877) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Peplidium sp. C Evol. Fl. Fauna Arid Aust. (N.T. Burbidge & A. Kanis 8158) - replace: Peplidium sp. C Evol. Fl. Fauna Arid Aust. (N.T.Burbidge & A.Kanis 8158) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Peplidium sp. E Evol. Fl. Fauna Arid Aust. (A.S. Weston 12768) - replace: Peplidium sp. E Evol. Fl. Fauna Arid Aust. (A.S.Weston 12768) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Petrophile squamata subsp. squamata - replace: Petrophile squamata subsp. squamata MS - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies -- find: Petunia xhybrida - replace: Petunia x hybrida - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Mt Gibbs (G.F. Craig 6658) - replace: Phebalium sp. Mt Gibbs (G.F.Craig 6658) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Yerilgee Sandplain (J. Jackson 223) - replace: Phebalium sp. Yerilgee Sandplain (J.Jackson 223) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Philotheca sp. Latham (F. Keast L4B 043) - replace: Philotheca sp. Latham (F.Keast L4B 043) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Philotheca spicata subsp. Moore River National Park - replace: Philotheca spicata subsp. Moore River National Park (G. & D.Woodman Op - 47) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Phyllanthus sp. D Kimberley Flora (C.R. Dunlop 5302) - replace: Phyllanthus sp. D Kimberley Flora (C.R.Dunlop 5302) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pilostyles sp. Northern Sandplains (P. Armstrong s.n. PERTH 06590179) - replace: Pilostyles sp. Northern Sandplains (P.Armstrong s.n. PERTH 06590179) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pimelea sp. Tarin Rock (E.J. Croxford 2118) - replace: Pimelea sp. Tarin Rock (E.J.Croxford 2118) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Plantago sp. Hamersley (M.E. Trudgen 11207) - replace: Plantago sp. Hamersley (M.E.Trudgen 11207) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Plantago sp. Mt Magnet (A.S. George 6793) - replace: Plantago sp. Mt Magnet (A.S.George 6793) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platanus xhispanica - replace: Platanus x hispanica - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Eneabba (R. Hnatiuk 770001) - replace: Platysace sp. Eneabba (R.Hnatiuk 770001) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Kalbarri (D. & B. Bellairs 1383) - replace: Platysace sp. Kalbarri (D. & B.Bellairs 1383) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Kennedy (P.G. Wilson 8450) - replace: Platysace sp. Kennedy (P.G.Wilson 8450) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Platysace sp. Stirling (J.M. Fox 88/262) - replace: Platysace sp. Stirling (J.M.Fox 88/262) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pluchea sp. B Kimberley Flora (K.F. Kenneally 9526A) - replace: Pluchea sp. B Kimberley Flora (K.F.Kenneally 9526A) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Podolepis sp. Carnarvon Range (D.J. Edinger Nats 33) - replace: Podolepis sp. Carnarvon Range (D.J.Edinger Nats 33) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Podolepis sp. Great Victoria Desert (A.S. George 8219) - replace: Podolepis sp. Great Victoria Desert (A.S.George 8219) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polycarpaea sp. A Kimberley Flora (K.F. Kenneally 8887) - replace: Polycarpaea sp. A Kimberley Flora (K.F.Kenneally 8887) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polygala sp. A Kimberley Flora (K.F. Kenneally 7752) - replace: Polygala sp. A Kimberley Flora (K.F.Kenneally 7752) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polygala sp. B Kimberley Flora (T.E.H. Aplin et al. 715) - replace: Polygala sp. B Kimberley Flora (T.E.H.Aplin et al. 715) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Polymeria sp. A Kimberley Flora (T.E.H. Aplin et al. 418) - replace: Polymeria sp. A Kimberley Flora (T.E.H.Aplin et al. 418) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pomax sp. desert (A.S. George 11968) - replace: Pomax sp. desert (A.S.George 11968) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Poranthera sp. Kings Park (R.L. Barrett 2958) - replace: Poranthera sp. Kings Park (R.L.Barrett 2958) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Prosopis glandulosa x velutina - replace: Prosopis glandulosa x Prosopis velutina - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Pseudactinia sp. Bruce Rock (J. Buegge D36) - replace: Pseudactinia sp. Bruce Rock (J.Buegge D36) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pseudactinia sp. Bungalbin Hill (F.H. & M.P. Mollemans 3069) - replace: Pseudactinia sp. Bungalbin Hill (F.H. & M.P.Mollemans 3069) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterocaulon sp. A Kimberley Flora (B.J. Carter 599) - replace: Pterocaulon sp. A Kimberley Flora (B.J.Carter 599) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Cape Arid (G. Brockman GBB 263) - replace: Pterostylis sp. Cape Arid (G.Brockman GBB 263) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Cape Le Grand (I. Solomon 550) - replace: Pterostylis sp. Cape Le Grand (I.Solomon 550) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Helena River (G. Brockman GBB 340) - replace: Pterostylis sp. Helena River (G.Brockman GBB 340) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Karri forest (W. Jackson BJ270) - replace: Pterostylis sp. Karri forest (W.Jackson BJ270) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Northampton (S.D. Hopper 3349) - replace: Pterostylis sp. (Northampton) S.D.Hopper 3349 - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Ongerup (K.R. Newbey 4874) - replace: Pterostylis sp. Ongerup (K.R.Newbey 4874) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Slender Snail Orchid (G.J. Keighery 14516) - replace: Pterostylis sp. Slender Snail Orchid (G.J.Keighery 14516) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. Southern Granites (W. Jackson BJ256) - replace: Pterostylis sp. Southern Granites (W.Jackson BJ256) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. broad petals (S.D. Hopper 4429) - replace: Pterostylis sp. broad petals (S.D.Hopper 4429) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. cauline leaves (N. Gibson & M.N. Lyons 1490) - replace: Pterostylis sp. cauline leaves (N.Gibson & M.N.Lyons 1490) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. clubbed snail orchid (R. Davis 8088) - replace: Pterostylis sp. clubbed snail orchid (R.Davis 8088) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. crinkled leaf (G.J. Keighery 13426) - replace: Pterostylis sp. crinkled leaf (G.J.Keighery 13426) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. dainty brown (N. Gibson & M. Lyons 3690) - replace: Pterostylis sp. dainty brown (N.Gibson & M.Lyons 3690) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. elegant snail orchid (G. Brockman GBB 1194) - replace: Pterostylis sp. elegant snail orchid (G.Brockman GBB 1194) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. exserted labellum (A.C. Beauglehole 12194) - replace: Pterostylis sp. exserted labellum (A.C.Beauglehole 12194) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. extended dorsal sepal (G. Paull 731) - replace: Pterostylis sp. extended dorsal sepal (G.Paull 731) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. fragile (S. Barrett 553) - replace: Pterostylis sp. fragile (S.Barrett 553) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. granite (W. Jackson BJ351) - replace: Pterostylis sp. granite (W.Jackson BJ351) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. inland (A.C. Beauglehole 11880) - replace: Pterostylis sp. inland (A.C.Beauglehole 11880) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. late flowering (W. Jackson BJ298) - replace: Pterostylis sp. late flowering (W.Jackson BJ298) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. limestone (B.J. Keighery & G.J. Keighery 65) - replace: Pterostylis sp. limestone (B.J.Keighery & G.J.Keighery 65) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. mid-west coast (G. Brockman GBB134) - replace: Pterostylis sp. mid-west coast (G.Brockman GBB134) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. miniature (J.R. Wheeler 3298) - replace: Pterostylis sp. miniature (J.R.Wheeler 3298) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. red flowered (W. Jackson BJ269) - replace: Pterostylis sp. red flowered (W.Jackson BJ269) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. robust (W. Jackson BJ294) - replace: Pterostylis sp. robust (W.Jackson BJ294) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. scooped sepals (G. Brockman GBB386) - replace: Pterostylis sp. scooped sepals (G.Brockman GBB386) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. short sepals (W. Jackson BJ259) - replace: Pterostylis sp. short sepals (W.Jackson BJ259) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. small stature (W. Jackson BJ303) - replace: Pterostylis sp. small stature (W.Jackson BJ303) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. striped sepal greenhood (G. Brockman GBB355) - replace: Pterostylis sp. striped sepal greenhood (G.Brockman GBB355) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. yellow eared (W. Jackson BJ359) - replace: Pterostylis sp. yellow eared (W.Jackson BJ359) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus humilis subsp. humilis - replace: Ptilotus humilis var. humilis - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Ptilotus humilis subsp. parviflorus - replace: Ptilotus humilis var. parviflorus - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety -- find: Ptilotus sp. Beaufort River (G.J. Keighery 16554) - replace: Ptilotus sp. Beaufort River (G.J.Keighery 16554) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Burnerbinmah (S. Patrick 2787) - replace: Ptilotus sp. Burnerbinmah (S.Patrick 2787) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Mt Narryer (A.S. George 17484) - replace: Ptilotus sp. Mt Narryer (A.S.George 17484) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Northampton (R. Davis 10952) - replace: Ptilotus sp. Northampton (R.Davis 10952) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Ptilotus sp. Porongurup (R. Davis 10805) - replace: Ptilotus sp. Porongurup (R.Davis 10805) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Puccinellia sp. Warren Road (M.N. Lyons 2710) - replace: Puccinellia sp. Warren Road (M.N.Lyons 2710) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Kundip (G.F. Craig 6008) - replace: Pultenaea sp. Kundip (G.F.Craig 6008) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (J.S. Beard 7827) - replace: Pultenaea sp. Mt Lesueur (J.S.Beard 7827) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (L.A. Orthia 86) - replace: Pultenaea sp. Mt Lesueur (L.A.Orthia 86) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. southern (L.A. Orthia 39) - replace: Pultenaea sp. southern (L.A.Orthia 39) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhagodia sp. Watheroo (R.J. Cranfield & P.J. Spencer 8183) - replace: Rhagodia sp. Watheroo (R.J.Cranfield & P.J.Spencer 8183) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhodanthe pollackii - replace: Rhodanthe polakii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhodanthe sp. Overlander (P.S. Short 2096) - replace: Rhodanthe sp. Overlander (P.S.Short 2096) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhynchospora sp. A Kimberley Flora (C.R. Dunlop 5329) - replace: Rhynchospora sp. A Kimberley Flora (C.R.Dunlop 5329) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rhynchospora sp. B Kimberley Flora (A.S. Weston 12363) - replace: Rhynchospora sp. B Kimberley Flora (A.S.Weston 12363) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rosa chinensis x moschata - replace: Rosa chinensis x Rosa moschata - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Rosa chinensis x multiflora - replace: Rosa chinensis x Rosa multiflora - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Rubus loganobaccus - replace: Rubus loganubaccus - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rubus xloganobaccus - replace: Rubus x loganobaccus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Ruellia sp. A Kimberley Flora (K.F. Kenneally 9007) - replace: Ruellia sp. A Kimberley Flora (K.F.Kenneally 9007) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rulingia apella - replace: Rulingia apella MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rulingia sp. Trigwell Bridge (R. Smith s.n. 20.6.89) - replace: Rulingia sp. Trigwell Bridge (R.Smith s.n. 20.6.1989) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Rumex xjohannis-moorei - replace: Rumex x johannis-moorei - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Rumex xmuretii - replace: Rumex x muretii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xpratensis - replace: Rumex x pratensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xpseudopulcher - replace: Rumex x pseudopulcher - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xschultzei - replace: Rumex x schultzei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Salvinia xmolesta - replace: Salvinia x molesta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Samolus sp. Millstream (M.I.H. Brooker 2076) - replace: Samolus sp. Millstream (M.I.H.Brooker 2076) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Samolus sp. Shark Bay (M.E. Trudgen 7410) - replace: Samolus sp. Shark Bay (M.E.Trudgen 7410) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sarcocornia quinqueflora subsp. quinqueflora - replace: Salicornia quinqueflora subsp. quinqueflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Sauropus sp. Woolgorong (M. Officer s.n. 10/8/94) - replace: Sauropus sp. Woolgorong (M.Officer s.n. 10/8/94) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola humifusa de - replace: Scaevola humifusa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola repens de - replace: Scaevola repens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola repens de var. repens - replace: Scaevola repens var. repens - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Scaevola repens subsp. Northern Sandplains - replace: Scaevola repens subsp. Northern Sandplains (R.J.Cranfield & P.J.Spencer - 8445) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Scaevola repens var. angustifolia de - replace: Scaevola repens var. angustifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Scaevola sp. Hamersley Range basalts (S. van Leeuwen 3675) - replace: Scaevola sp. Hamersley Range basalts (S.van Leeuwen 3675) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scaevola sp. Lake Cairlocup (K. Newbey 9834) - replace: Scaevola sp. Lake Cairlocup (K.Newbey 9834) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sesquispiculus - replace: Schoenus sesquispicula - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. A1 Boorabbin (K.L. Wilson 2581) - replace: Schoenus sp. A1 Boorabbin (K.L.Wilson 2581) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. A2 Kulin (B.G. Briggs 7939) - replace: Schoenus sp. A2 Kulin (B.G.Briggs 7939) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. A3 Ciliate Sheaths (K.R. Newbey 9402) - replace: Schoenus sp. A3 Ciliate Sheaths (K.R.Newbey 9402) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Beaufort (G.J. Keighery 6291) - replace: Schoenus sp. Beaufort (G.J. Keighery 6291) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Schoenus sp. Bullsbrook (J.J. Alford 915) - replace: Schoenus sp. Bullsbrook (J.J.Alford 915) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Cape Riche Cushion (G.J. Keighery 9922) - replace: Schoenus sp. Cape Riche Cushion (G.J.Keighery 9922) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Eneabba (F. Obbens & C. Godden I154) - replace: Schoenus sp. Eneabba (F.Obbens & C.Godden I154) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. G Broad Sheath (K.L. Wilson 2633) - replace: Schoenus sp. G Broad Sheath (K.L.Wilson 2633) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Grassy (E. Gude & J. Harvey 250) - replace: Schoenus sp. Grassy (E.Gude & J.Harvey 250) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Grey Rhizome (K.L. Wilson 2922) - replace: Schoenus sp. Grey Rhizome (K.L.Wilson 2922) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Jindong (R.D. Royce 2485) - replace: Schoenus sp. Jindong (R.D.Royce 2485) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Kalbarri (K.R. Newbey 9352) - replace: Schoenus sp. Kalbarri (K.R.Newbey 9352) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Mt Barker (G.J. Keighery 9679) - replace: Schoenus sp. Mt Barker (G.J.Keighery 9679) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Murchison (K.L. Wilson 2647) - replace: Schoenus sp. Murchison (K.L.Wilson 2647) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Stirling (G.J. Keighery 3427) - replace: Schoenus sp. Stirling (G.J.Keighery 3427) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Toodyay (G.J. Keighery & N. Gibson 2918) - replace: Schoenus sp. Toodyay (G.J.Keighery & N.Gibson 2918) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Waroona (G.J. Keighery 12235) - replace: Schoenus sp. Waroona (G.J.Keighery 12235) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. smooth culms (K.R. Newbey 7823) - replace: Schoenus sp. smooth culms (Newbey 7823) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Ajana (T.A. Halliday 137) - replace: Scholtzia sp. Ajana (T.A.Halliday 137) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Binnu (M.E. Trudgen 2218) - replace: Scholtzia sp. Binnu (M.E.Trudgen 2218) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Binnu East Road (M.E. Trudgen 12013) - replace: Scholtzia sp. Binnu East Road (M.E.Trudgen 12013) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. East Yuna (A.C. Burns 6) - replace: Scholtzia sp. East Yuna (A.C.Burns 6) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Eneabba (S. Maley 8) - replace: Scholtzia sp. Eneabba (S.Maley 8) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Eradu (R.D. Royce 8016) - replace: Scholtzia sp. Eradu (R.D.Royce 8016) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Eurardy (J.S. Beard 6886) - replace: Scholtzia sp. Eurardy (J.S.Beard 6886) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Folly Hill (M.E. Trudgen 12097) - replace: Scholtzia sp. Folly Hill (M.E.Trudgen 12097) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Galena (W.E. Blackall 4728) - replace: Scholtzia sp. Galena (W.E.Blackall 4728) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Geraldton (F. Lullfitz L 3216) - replace: Scholtzia sp. Geraldton (F.Lullfitz L 3216) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Gunyidi (J.D. Briggs 1721) - replace: Scholtzia sp. Gunyidi (J.D.Briggs 1721) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Kalbarri (N. Hoyle 623) - replace: Scholtzia sp. Kalbarri (N.Hoyle 623) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Kojarena (A.M. Ashby 1904) - replace: Scholtzia sp. Kojarena (A.M.Ashby 1904) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Murchison River (A.S. George 7098) - replace: Scholtzia sp. Murchison River (A.S.George 7908) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Northampton (A. Strid 20714) - replace: Scholtzia sp. Northampton (A.Strid 20174) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Prowaka Springs (R.J. Cranfield & P. Spencer 8083) - replace: Scholtzia sp. Prowaka Springs (R.J.Cranfield & P.Spencer RJC 8083) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Red Bluff (A. Gunness 2373) - replace: Scholtzia sp. Red Bluff (A.Gunness 2373) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Ross Graham Lookout (S. Maley 6) - replace: Scholtzia sp. Ross Graham Lookout (S.Maley 6) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Shark Bay (M.E. Trudgen 7429) - replace: Scholtzia sp. Shark Bay (M.E.Trudgen 7429) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S. Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S.J.Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Whelarra (M.E. Trudgen 12018) - replace: Scholtzia sp. Whelarra (M.E.Trudgen 12018) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Yandanooka (R. Soullier 646) - replace: Scholtzia sp. Yandanooka (R.Soullier 646) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scleria sp. B Kimberley Flora (C.R. Dunlop 5409) - replace: Scleria sp. B Kimberley Flora (C.R.Dunlop 5409) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scleria sp. C Kimberley Flora (K.F. Kenneally 4873) - replace: Scleria sp. C Kimberley Flora (K.F.Kenneally 4873) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sclerolaena xgeorgei - replace: Sclerolaena x georgei - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Senna artemisioides subsp. petiolaris - replace: Senna artemisioides subsp. x petiolaris - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xartemisioides - replace: Senna artemisioides subsp. x artemisioides - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xcoriacea - replace: Senna artemisioides subsp. x coriacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xsturtii - replace: Senna artemisioides subsp. x sturtii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna glutinosa subsp. xluerssenii - replace: Senna glutinosa subsp. x luerssenii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna sp. Austin (A. Strid 20210) - replace: Senna sp. Austin (A.Strid 20210) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Billabong (J.D. Alonzo 721) - replace: Senna sp. Billabong (J.D.Alonzo 721) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Karijini (M.E. Trudgen 10392) - replace: Senna sp. Karijini (M.E.Trudgen 10392) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Meekatharra (E. Bailey 1-26) - replace: Senna sp. Meekatharra (E.Bailey 1-26) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Senna sp. Tamala (M.E. Trudgen 7334A) - replace: Senna sp. Tamala (M.E.Trudgen 7334A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. A Kimberley Flora (P.A. Fryxell & L.A. Craven 3900) - replace: Sida sp. A Kimberley Flora (P.A.Fryxell & L.A.Craven 3900) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Articulation below (A.A. Mitchell PRP 1605) - replace: Sida sp. Articulation below (A.A.Mitchell PRP1605) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Barlee Range (S. van Leeuwen 1642) - replace: Sida sp. Barlee Range (S.van Leeuwen 1642) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Bungle Bungles (M.I. Blackwell 219) - replace: Sida sp. Bungle Bungles (M.I.Blackwell 219) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. C Kimberley Flora (T.E.H. Aplin 4982) - replace: Sida sp. C Kimberley Flora (T.E.H.Aplin 4982) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Carnarvon (P.S. Short 2492) - replace: Sida sp. Carnarvon (P.S.Short 2492) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Excedentifolia (J.L. Egan 1925) - replace: Sida sp. Excedentifolia (J.L.Egan 1925) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces glabrous (H.N. Foote 32) - replace: Sida sp. golden calyces glabrous (H.N.Foote 32) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces pubescent (G.J. Leach 1966) - replace: Sida sp. Golden calyces pubescent (G.J.Leach 1966) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Hamersley Range (K. Newbey 10692) - replace: Sida sp. Hamersley Range (K.Newbey 10692) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. L (A.M. Ashby 4202) - replace: Sida sp. L (A.M.Ashby 4202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Pilbara (A.A. Mitchell PRP 1543) - replace: Sida sp. Pilbara (A.A.Mitchell PRP1543) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Pindar (A. Mitchell 3585) - replace: Sida sp. Pindar (A.A.Mitchell 3585) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Rabbit Flat (B.J. Carter 626) - replace: Sida sp. Rabbit Flat (B.J.Carter 626) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Shovelanna Hill (S. van Leeuwen 3842) - replace: Sida sp. Shovelanna Hill (S.van Leeuwen 3842) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Supplejack Station (T.S. Henshall 2345) - replace: Sida sp. Supplejack Station (T.S.Henshall 2345) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Watarrka (D.E. Albrecht 8672) - replace: Sida sp. Watarrka (D.E.Albrecht 8672) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Western sand dunes (P.K. Latz 11980) - replace: Sida sp. Western sand dunes (P.K.Latz 11980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. dark green fruits (S. van Leeuwen 2260) - replace: Sida sp. dark green fruits (S.van Leeuwen 2260) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. sand dunes (A.A. Mitchell PRP1208) - replace: Sida sp. sand dunes (A.A.Mitchell PRP1208) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/1990) - replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/90) - replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. tiny glabrous fruit (A.A. Mitchell PRP1152) - replace: Sida sp. tiny glabrous fruit (A.A.Mitchell PRP1152) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. verrucose glands (F.H. Mollemans 2423) - replace: Sida sp. verrucose glands (F.H.Mollemans 2423) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Solanum sp. Boomerang Bay (K.F. Kenneally 10021) - replace: Solanum sp. Boomerang Bay (K.F.Kenneally 10021) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sorghum xalmum - replace: Sorghum x almum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Spergularia sp. 5 Leeman (G.J. Keighery & J.J. Alford 488) - replace: Spergularia sp. 5 Leeman (G.J.Keighery & J.J.Alford 488) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sphenotoma sp. Stirling Range (P.G. Wilson 4235) - replace: Sphenotoma sp. Stirling Range (P.G.Wilson 4235) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Spinifex xalterniflorus - replace: Spinifex x alterniflorus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stackhousia sp. swollen gynophore (W.R. Barker 2041) - replace: Stackhousia sp. Swollen gynophore (W.R.Barker 2041) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stemodia sp. Battle Hill (A.L. Payne 1006) - replace: Stemodia sp. Battle Hill (A.L.Payne 1006) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stemodia sp. Onslow (A.A. Mitchell 76/148) - replace: Stemodia sp. Onslow (A.A.Mitchell 76/148) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium egralliforme - replace: Stylidium egralliforme MS - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Bindoon (K.F. Kenneally 11405) - replace: Stylidium sp. Bindoon (K.F.Kenneally 11405) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Boulder Rock (A.H. Burbidge 2536) - replace: Stylidium sp. Boulder Rock (A.H.Burbidge 2536) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Dewars Pool (K.F. Kenneally 11400) - replace: Stylidium sp. Dewars Pool (K.F.Kenneally 11400) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Kalbarri (A. Carr 145) - replace: Stylidium sp. Kalbarri (A.Carr 145) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Mt Barker (E.J. Croxford 1906) - replace: Stylidium sp. Mt Barker (E.J.Croxford 1906) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Swainsona sp. Hamersley Station (A.A. Mitchell 196) - replace: Swainsona sp. Hamersley Station (A.A.Mitchell 196) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Swainsona sp. Shark Bay (M.E. Trudgen 7588) - replace: Swainsona sp. Shark Bay (M.E.Trudgen 7588) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Fairbridge Farm (D. Papenfus 696) - replace: Synaphea sp. Fairbridge Farm (D.Papenfus 696) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Jilakin Flat Rocks Rd (R. Butcher et. al RB200) - replace: Synaphea sp. Jilakin Flat Rocks Rd (R.Butcher et al. RB200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup (D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup(D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Pinjarra (R. Davis 6578) - replace: Synaphea sp. Pinjarra (R.Davis 6578) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Synaphea sp. Redgate Road (J. Scott 16) - replace: Synaphea sp. Redgate Road (J.Scott 16) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tecticornia mellaria - replace: Tecticornia mellarium - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tecticornia sp. Gunyidi (M.N. Lyons 2607) - replace: Tecticornia sp. Gunyidi (M.N.Lyons 2607) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tecticornia sp. Roy Hill (H. Pringle 62) - replace: Tecticornia sp. Roy Hill (H.Pringle 62) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Tephrosia rosea var. Napier Range - replace: Tephrosia rosea var. Napier Range (C.R.Dunlop 7760 & B.K.Simon) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Tephrosia rosea var. glabrior - replace: Tephrosia rosea var. glabrior MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Tephrosia rosea var. venulosa - replace: Tephrosia rosea var. venulosa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Tephrosia sp. B Kimberley Flora (C.A. Gardner 7300) - replace: Tephrosia sp. B Kimberley Flora (C.A.Gardner 7300) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Bungaroo Creek (M.E. Trudgen 11601) - replace: Tephrosia sp. Bungaroo Creek (M.E.Trudgen 11601) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. C Kimberley Flora (K.F. Kenneally 5599) - replace: Tephrosia sp. C Kimberley Flora (K.F.Kenneally 5599) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Carnarvon (J.H. Ross 2681) - replace: Tephrosia sp. Carnarvon (J.H.Ross 2681) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Cathedral Gorge (F.H. Mollemans 2420) - replace: Tephrosia sp. Cathedral Gorge (F.H.Mollemans 2420) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Central (P.K. Latz 17037) - replace: Tephrosia sp. Central (P.K.Latz 17037) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. D Kimberley Flora (R.D. Royce 1848) - replace: Tephrosia sp. D Kimberley Flora (R.D.Royce 1848) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Dunes (J.R. Maconochie 938) - replace: Tephrosia sp. Dunes (J.R.Maconochie 938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Durack River (C.A. Gardner 9938) - replace: Tephrosia sp. Durack River (C.A.Gardner 9938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. E Kimberley Flora (C.A. Gardner 9937) - replace: Tephrosia sp. E Kimberley Flora (C.A.Gardner 9937) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. F Kimberley Flora (B.R. Maslin 5139) - replace: Tephrosia sp. F Kimberley Flora (B.R.Maslin 5139) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. G Kimberley Flora (G.J. Keighery 4828) - replace: Tephrosia sp. G Kimberley Flora (G.J.Keighery 4828) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Kennedy Range (J.S. Beard 4392) - replace: Tephrosia sp. Kennedy Range (J.S.Beard 4392) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Kununurra (T. Handasyde TH00 250) - replace: Tephrosia sp. Kununurra (T.Handesyde TH00 250) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Magazine Hill (P. Jones 365) - replace: Tephrosia sp. Magazine Hill (P.Jones 365) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Mistake Creek (A.C. Beauglehole 54424) - replace: Tephrosia sp. Mistake Creek (A.C.Beauglehole 54424) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. NW Eremaean (S. van Leeuwen et al. PBS 0356) - replace: Tephrosia sp. NW Eremaean (S.van Leeuwen et al. PBS 0356) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Newman (A.A. Mitchell PRP 29) - replace: Tephrosia sp. Newman (A.A.Mitchell PRP 29) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Northern (K.F. Kenneally 11950) - replace: Tephrosia sp. Northern (K.F.Kenneally 11950) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Onslow (K.R. Newbey 10571) - replace: Tephrosia sp. Onslow (K.R.Newbey 10571) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Pentecost River (I.D. Cowie 4168) - replace: Tephrosia sp. Pentecost River (I.D.Cowie 4168) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Saw Ranges (D. Kabay s.n. PERTH 06720544) - replace: Tephrosia sp. Saw Ranges (D.Kabay s.n. PERTH 06720544) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Willowra (G.M. Chippendale 4809) - replace: Tephrosia sp. Willowra (G.M.Chippendale 4809) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. clay soils (S. van Leeuwen et al. PBS 0273) - replace: Tephrosia sp. Clay soils (S.van Leeuwen et al. PBS 0273) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. deserts (J.R. Maconochie 1403) - replace: Tephrosia sp. deserts (J.R.Maconochie 1403) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. sparse pinnae (C.R. Michel 2202) - replace: Tephrosia sp. Sparse pinnae (C.R.Michell 2202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tetratheca sp. Granite (S. Patrick SP1224) - replace: Tetratheca sp. Granite (S.Patrick SP1224) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tetratheca sp. Kent River (B.G. Hammersley 1791) - replace: Tetratheca sp. Kent River (B.G.Hammersley 1791) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tetratheca sp. Mt Solus (F. Obbens 307/98) - replace: Tetratheca sp. Mt Solus (F.Obbens 307/98) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. Balladonia (K.R. Newbey 7380) - replace: Teucrium sp. Balladonia (K.R.Newbey 7380) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. Norseman (T.E.H. Aplin 1851) - replace: Teucrium sp. Norseman (T.E.H.Aplin 1851) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. Sturt Creek (A.A. Mitchell 5536) - replace: Teucrium sp. Sturt Creek (A.A.Mitchell 5536) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Teucrium sp. dwarf (R. Davis 8813) - replace: Teucrium sp. dwarf (R.Davis 8813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thelymitra sp. Brookton (A.S. George 11631) - replace: Thelymitra sp. Brookton (A.S.George 11631) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thelymitra sp. Esperance (N.S. Lander 1080) - replace: Thelymitra sp. Esperance (N.S.Lander 1080) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thelymitra sp. Slender Sun Orchid (A.R. Annels 2884) - replace: Thelymitra sp. Slender Sun Orchid (A.R.Annels 2884) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Themeda sp. Hamersley Station (M.E. Trudgen 11431) - replace: Themeda sp. Hamersley Station (M.E.Trudgen 11431) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Themeda sp. Mt Barricade (M.E. Trudgen 2471) - replace: Themeda sp. Mt Barricade (M.E.Trudgen 2471) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Arthur River (H.F. & M. Broadbent 1409) - replace: Thomasia sp. Arthur River (H.F. & M.Broadbent 1409) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Big Brook (M. Koch 2373) - replace: Thomasia sp. Big Brook (M.Koch 2373) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Gingin (F. & J. Hort 1511) - replace: Thomasia sp. Gingin (F. & J.Hort 1511) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Green Hill (S. Paust 1322) - replace: Thomasia sp. Green Hill (S.Paust 1322) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Lesueur (M. Hislop 4217) - replace: Thomasia sp. Lesueur (M.Hislop 4217) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Merredin (M.B. Mills 11) - replace: Thomasia sp. Merredin (M.B.Mills 11) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Salmon Gums (C.A. Gardner s.n. PERTH 02708639) - replace: Thomasia sp. Salmon Gums (C.A.Gardner s.n. PERTH 02708639) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Toolbrunup (G.J. Keighery 9895) - replace: Thomasia sp. Toolbrunup (G.J.Keighery 9895) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Vasse (C. Wilkins & K. Shepherd CW 581) - replace: Thomasia sp. Vasse (C.Wilkins & K.Shepherd CW581) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia xformosa - replace: Thomasia x formosa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene glaucosa - replace: Thryptomene glaucosa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Carrarang (M.E. Trudgen 7420) - replace: Thryptomene sp. Carrarang (M.E.Trudgen 7420) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Eagle Gorge (A.G. Gunness 2360) - replace: Thryptomene sp. Eagle Gorge (A.G.Gunness 2360) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. East Yuna (J.W. Green 4639) - replace: Thryptomene sp. East Yuna (J.W.Green 4639) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Eneabba (R.J. Cranfield 8433) - replace: Thryptomene sp. Eneabba (R.J.Cranfield 8433) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Eurardy (D. & B. Bellairs 1649) - replace: Thryptomene sp. Eurardy (D. & B.Bellairs 1649) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Geraldton (H. Demarz 5145) - replace: Thryptomene sp. Geraldton (H.Demarz 5145) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Lancelin (M.E. Trudgen 14000) - replace: Thryptomene sp. Lancelin (M.E.Trudgen 14000) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Moresby Range (A.S. George 14873) - replace: Thryptomene sp. Moresby Range (A.S.George 14873) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Steep Point (M.E. Trudgen 7421) - replace: Thryptomene sp. Steep Point (M.E.Trudgen 7421) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Tamala (M.E. Trudgen 7384) - replace: Thryptomene sp. Tamala (M.E.Trudgen 7384) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thryptomene sp. Yuna Reserve (A.C. Burns 100) - replace: Thryptomene sp. Yuna Reserve (A.C.Burns 100) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Badgingarra (E.A. Griffin 2511) - replace: Thysanotus sp. Badgingarra (E.A.Griffin 2511) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Desert East of Newman (R.P. Hart 964) - replace: Thysanotus sp. Desert East of Newman (R.P.Hart 964) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Eremaean (S. van Leeuwen 1067) - replace: Thysanotus sp. Eremaean (S.van Leeuwen 1067) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Great Victoria Desert (A.S. George 8406) - replace: Thysanotus sp. Great Victoria Desert (A.S.George 8406) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Kalbarri (D. & B. Bellairs 1523 A) - replace: Thysanotus sp. Kalbarri (D. & B.Bellairs 1523 A) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thysanotus sp. Twining Wheatbelt (N.H. Brittan 81/29) - replace: Thysanotus sp. Twining Wheatbelt (N.H.Brittan 81/29) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Trianthema oxycalyptra var. oxycalyptra - replace: Trianthema oxycalyptrum var. oxycalyptrum - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: variety -- find: Tribonanthes sp. Lake Muir (G.J. Keighery & N. Gibson 2134) - replace: Tribonanthes sp. Lake Muir (G.J.Keighery & N.Gibson 2134) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulopis sp. Koolan Island (K.F. Kenneally 8278) - replace: Tribulopis sp. Koolan Island (K.F.Kenneally 8728) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulopis sp. Mitchell Plateau (K.F. Kenneally 7935) - replace: Tribulopis sp. Mitchell Plateau (K.F.Kenneally 7935) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulus sp. long-styled eichlerianus (A.S. George 10666) - replace: Tribulus sp. long-styled eichlerianus (A.S.George 10666) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulus sp. saline flats (P.K. Latz 4530) - replace: Tribulus sp. saline flats (P.K.Latz 4530) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Trichanthodium exile - replace: Trichanthodium exilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Trichocline sp. Treeton (B.J. Keighery & N. Gibson 564) - replace: Trichocline sp. Treeton (B.J.Keighery & N.Gibson 564) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Eneabba (E.A. Griffin 1200) - replace: Tricoryne sp. Eneabba (E.A.Griffin 1200) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Geraldton (G.J. Keighery 10461) - replace: Tricoryne sp. Geraldton (G.J.Keighery 10461) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Kimberley (K.F. Kenneally 4857) - replace: Tricoryne sp. Kimberley (K.F.Kenneally 4857) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Morawa (G.J. Keighery & N. Gibson 6759) - replace: Tricoryne sp. Morawa (G.J.Keighery & N.Gibson 6759) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Mullewa (G.J. Keighery 12080) - replace: Tricoryne sp. Mullewa (G.J.Keighery 12080) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. South Coast (T.E.H. Aplin 2653) - replace: Tricoryne sp. South Coast (T.E.H.Aplin 2653) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tricoryne sp. Wongan Hills (B.H. Smith 794) - replace: Tricoryne sp. Wongan Hills (B.H.Smith 794) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triglochin sp. A Flora of Australia (G.J. Keighery 2477) - replace: Triglochin sp. A Flora of Australia (G.J.Keighery 2477) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triglochin sp. B Flora of Australia (P.G. Wilson 4294) - replace: Triglochin sp. B Flora of Australia (P.G.Wilson 4294) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triglochin sp. C Flora of Australia (P.G. Wilson 8811) - replace: Triglochin sp. C Flora of Australia (P.G.Wilson 8811) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triodia sp. Mt Ella (M.E. Trudgen 12739) - replace: Triodia sp. Mt Ella (M.E.Trudgen 12739) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triumfetta sp. Adolphus Island (K.F. Kenneally 11898) - replace: Triumfetta sp. Adolphus Island (KF.Kenneally 11898) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triumfetta sp. Mt Bomford (M.D. Barrett MDB 1001) - replace: Triumfetta sp. Mt Bomford (M.D.Barrett MDB 1001) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Typhonium sp. Kununurra (A.N. Start ANS 1467) - replace: Typhonium sp. Kununurra (A.N.Start ANS 1467) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Urodon sp. Galena (G.J. Keighery 14733) - replace: Urodon sp. Galena (G.L.Keighery 14733) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Urodon sp. Narkal (B.H. Smith 1440) - replace: Urodon sp. Narkal (B.H.Smith 1440) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Verticordia serrata var. Udumung - replace: Verticordia serrata var. Udumung (D.Hunter & B.Yarran 941006) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety -- find: Verticordia xeurardyensis - replace: Verticordia x eurardyensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Vigna sp. Hamersley Clay (A.A. Mitchell PRP 113) - replace: Vigna sp. Hamersley Clay (A.A.Mitchell PRP 113) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Vigna sp. northern pubescent (A.A. Mitchell 3667) - replace: Vigna sp. northern pubescent (A.A.Mitchell 3667) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Vittadinia sp. A Kimberley Flora (R.J. Cranfield 6527) - replace: Vittadinia sp. A Kimberley Flora (R.J.Cranfield 6527) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Wahlenbergia preissii de - replace: Wahlenbergia preissii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Wedelia sp. Hamersley (A.S. Weston 8444) - replace: Wedelia sp. Hamersley (A.S.Weston 8444) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Wurmbea sp. Cranbrook (A.R. Annels 3819) - replace: Wurmbea sp. Cranbrook (A.R.Annels 3819) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Wurmbea sp. Great Victoria Desert (G.J. Keighery 7501) - replace: Wurmbea sp. Great Victoria Desert (G.J.Keighery 7501) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Xanthosia sp. Dardanup (B.J. Keighery & N. Gibson 174) - replace: Xanthosia sp. Dardanup (B.J.Keighery & N.Gibson 174) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Xyris atrovirida - replace: Xyris atroviridis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Zornia sp. West Kimberley (C.A. Gardner 9942) - replace: Zornia sp. West Kimberley (C.A.Gardner 9942) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species exclude_observations: - variable: taxon_name - find: Caulerpa scalpelliformis, Ecklonia radiata, Codium duthieae, Asparagopsis taxiformis + find: Caulerpa scalpelliformis, Ecklonia radiata, Codium duthieae reason: kelp questions: .na diff --git a/data/WAH_2023_2/metadata.yml b/data/WAH_2023_2/metadata.yml index ca15d6d4c..3ca667039 100644 --- a/data/WAH_2023_2/metadata.yml +++ b/data/WAH_2023_2/metadata.yml @@ -56,7 +56,7 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: yes - custom_R_code: ' + custom_R_code: ' data %>% filter(!is.na(taxon_name)) %>% filter(str_detect(taxon_name, " ")) %>% @@ -502,26 +502,10 @@ taxonomic_updates: replace: Abutilon sp. Cape Range (A.S.George 1312) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Abutilon sp. Dioicum (A.A. Mitchell PRP 1618) - replace: Abutilon sp. Dioicum (A.A.Mitchell PRP 1618) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Abutilon sp. Hamelin (A.M. Ashby 2196) replace: Abutilon sp. Hamelin (A.M.Ashby 2196) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Onslow (F. Smith s.n. 10/9/61) - replace: Abutilon sp. Onslow (F.Smith s.n. 10/09/1961) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Abutilon sp. Pilbara (W.R. Barker 2025) - replace: Abutilon sp. Pilbara (W.R.Barker 2025) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Abutilon sp. Quobba (H. Demarz 3858) replace: Abutilon sp. Quobba (H.Demarz 3858) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -559,11 +543,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: variety -- find: Acacia monticola x trachycarpa - replace: Acacia monticola x Acacia trachycarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Acacia monticola x trachycarpa replace: Acacia monticola x Acacia trachycarpa reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -591,22 +570,10 @@ taxonomic_updates: replace: Acacia sp. Broome (B.R.Maslin 4918) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia sp. Bungalbin Hill (J.J. Alford 1119) - replace: Acacia sp. Bungalbin Hill (J.J.Alford 1119) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Acacia sp. Cadoux (B.R.Maslin 5786) - replace: Acacia sp. Cadoux (B.R.Maslin 5786) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Acacia sp. Cadoux (B.R. Maslin 5786) replace: Acacia sp. Cadoux (B.R.Maslin 5786) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia sp. Cape Arid (A.S.Weston 8164) - replace: Acacia sp. Cape Arid (A.S.Weston 8164) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Acacia sp. Cape Arid (A.S. Weston 8164) replace: Acacia sp. Cape Arid (A.S.Weston 8164) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -623,10 +590,6 @@ taxonomic_updates: replace: Acacia sp. Edgar Range (S.D.Hopper 1763) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia sp. Esperance (M.A. Burgman 1833b) - replace: Acacia sp. Esperance (M.A.Burgman 1833b) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Acacia sp. F Kimberley Flora (J.J. Alford 557) replace: Acacia sp. F Kimberley Flora (J.J.Alford 557) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -675,10 +638,6 @@ taxonomic_updates: replace: Acacia sp. Manmanning (B.R.Maslin 7711) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Acacia sp. Marble Bar (J.G. & M.H. Simmons 3499) - replace: Acacia sp. Marble Bar (J.G. & M.H.Simmons 3499) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Acacia sp. Minnie Creek (B.R. Maslin 5217) replace: Acacia sp. Minnie Creek (B.R.Maslin 5217) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -779,10 +738,6 @@ taxonomic_updates: replace: Acacia sp. Windy Corner (P.K.Latz 17865) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Acacia sp. Wongawol (I. Kealley IEK 015) - replace: Acacia sp. Wongawol (I. Kealley IEK 015) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Acacia sp. Wren Creek Crossing (K.F. Kenneally 11853) replace: Acacia sp. Wren Creek Crossing (K.F.Kenneally 11853) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -828,31 +783,15 @@ taxonomic_updates: replace: Actinotus sp. Comet Vale (A.V.Milewski AVM1093) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Actinotus sp. Walpole (J.R. Wheeler 3786) - replace: Actinotus sp. Walpole (J.R.Wheeler 3786) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species - find: Adenanthos barbiger subsp. barbiger ms replace: Adenanthos barbiger reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Adenanthos xcunninghamii - replace: Adenanthos x cunninghamii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Adenanthos xpamela - replace: Adenanthos x pamela - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species - find: Alyogyne angulata replace: Alyogyne angulata MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Alyogyne angustiloba - replace: Alyogyne angustiloba MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Alyogyne coronopifolia replace: Alyogyne coronopifolia MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -871,30 +810,6 @@ taxonomic_updates: replace: Alyogyne pyrrhophila MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Alyogyne sp. Geraldton (R. Davis 3487) - replace: Alyogyne sp. Geraldton (R.Davis 3487) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Great Victoria Desert (D.J. Edinger 6212) - replace: Alyogyne sp. Great Victoria Desert (D.J.Edinger 6212) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hutt River (B.J. Lepschi & T.R. Lally 2310) - replace: Alyogyne sp. Hutt River (B.J.Lepschi & T.R.Lally 2310) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S. Durell GD 127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Hyden (G.S.Durrell GD127) - replace: Alyogyne sp. Hyden (G.S.Durell GD127) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Alyogyne sp. Rockingham (G.J. Keighery 14463) - replace: Alyogyne sp. Rockingham (G.J.Keighery 14463) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Alyogyne wrayae replace: Alyogyne wrayae MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -903,10 +818,6 @@ taxonomic_updates: replace: Amaranthus sp. A Kimberley Flora (C.A.Gardner s.n. PERTH 00326518) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Amyema sp. Fortescue (M.E. Trudgen 5358) - replace: Amyema sp. Fortescue (M.E.Trudgen 5358) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Anacampseros sp. Eremaean (F. Hort, J. Hort & J. Shanks 3248) replace: Anacampseros sp. Eremaean (F.Hort, J.Hort & J.Shanks 3248) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -940,10 +851,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Anigozanthos manglesii var. xangustifolius - replace: Anigozanthos manglesii var. x angustifolius - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: variety - find: Anigozanthos viridis subsp. Cataby replace: Anigozanthos viridis subsp. Cataby (S.D.Hopper 1786) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -961,14 +868,6 @@ taxonomic_updates: replace: Anthotium sp. Peaceful Bay (J.R.Wheeler 3772 & S.J.Patrick) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Aotus sp. Cunderdin (B.J. Lepschi et al. 3587) - replace: Aotus sp. Cunderdin (B.J.Lepschi et al. 3587) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Aotus sp. Dundas (M.A. Burgman 2835) - replace: Aotus sp. Dundas (M.A.Burgman 2835) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Apium prostratum subsp. prostratum var. filiforme replace: Apium prostratum subsp. prostratum reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -1060,11 +959,6 @@ taxonomic_updates: replace: Atriplex sp. De Grey (A.A.Mitchell PRP1940) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Austrodolichos errabundus var. errabundus - replace: Austrodolichos errabundus - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Austrodolichos erubescens replace: Austrodolichos erubescens MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1079,11 +973,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Baeckea crispiflora subsp. Ongerup - replace: Baeckea crispiflora subsp. Ongerup (A.Scougall & C.Garawanta E35) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Baeckea sp. Baladjie (P.J. Spencer 24) replace: Baeckea sp. Baladjie (P.J.Spencer 24) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1104,10 +993,6 @@ taxonomic_updates: replace: Baeckea sp. Bulla Bulling (D.J.E.Whibley 4648) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Bungalbin Hill (B.J. Lepschi & L.A. Craven 4586) - replace: Baeckea sp. Bungalbin Hill (B.J.Lepschi & L.A.Craven 4586) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Bunjil (B.R. Maslin 5067) replace: Baeckea sp. Bunjil (B.R.Maslin 5067) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1128,10 +1013,6 @@ taxonomic_updates: replace: Baeckea sp. Darling Range (R.J.Cranfield 1673) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Die Hardy Range (E. Mattiske J91) - replace: Baeckea sp. Die Hardy Range (E.Mattiske J91) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. East Yuna (R. Spjut & C. Edson 7077) replace: Baeckea sp. East Yuna (R.Spjut & C.Edson 7077) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1164,11 +1045,6 @@ taxonomic_updates: replace: Baeckea sp. Hatter Hill (K.R.Newbey 3284) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Helena & Aurora Range (G.J.Keighery 4424) - replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Helena and Aurora Range (G.J. Keighery 4424) replace: Baeckea sp. Helena and Aurora Range (G.J.Keighery 4424) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1185,10 +1061,6 @@ taxonomic_updates: replace: Baeckea sp. Koorda (W.E.Blackall 3371) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Lake Cronin (K.R. Newbey 9191) - replace: Baeckea sp. Lake Cronin (K.R.Newbey 9191) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. London Bridge (M.E. Trudgen 5393) replace: Baeckea sp. London Bridge (M.E.Trudgen 5393) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1233,14 +1105,6 @@ taxonomic_updates: replace: Baeckea sp. Nanga (A.S.George 11346) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Narembeen (G.J. Keighery & N. Gibson 3010) - replace: Baeckea sp. Narembeen (G.J.Keighery & N.Gibson 3010) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Baeckea sp. Narrogin (R. Hnatiuk 780011) - replace: Baeckea sp. Narrogin (R.Hnatiuk 780011) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Nolba (M.E. Trudgen MET21632) replace: Baeckea sp. Nolba (M.E.Trudgen MET21632) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1253,10 +1117,6 @@ taxonomic_updates: replace: Baeckea sp. Parker Range (M.Hislop & F.Hort MH 2968) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Payne's Find (S.Patrick 1095) - replace: Baeckea sp. Paynes Find (S.Patrick 1095) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Paynes Find (S. Patrick 1095) replace: Baeckea sp. Paynes Find (S.Patrick 1095) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1277,19 +1137,11 @@ taxonomic_updates: replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Sandstone (C.A.Gardner s.n., 26 Oct. 1963) - replace: Baeckea sp. Sandstone (C.A.Gardner s.n. 26 Oct. 1963) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Sheoaks Rocks (M.E. Trudgen MET 5452) replace: Baeckea sp. Sheoaks Rocks (M.E.Trudgen MET 5452) reason: Fuzzy match of taxon name to an APNI-listed canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Baeckea sp. Sheoaks Rocks (M.E. Trudgen MET5452) - replace: Baeckea sp. Sheoaks Rocks (M.E.Trudgen MET5452) - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-22) - taxonomic_resolution: species - find: Baeckea sp. Stockton Road (M.E. Trudgen MET22077 & B. Rye) replace: Baeckea sp. Stockton Road (M.E.Trudgen MET22077 & B.Rye) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1310,10 +1162,6 @@ taxonomic_updates: replace: Baeckea sp. Western Australia (J.Drummond s.n.) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Baeckea sp. Whelarra (A.C. Burns 7) - replace: Baeckea sp. Whelarra (A.C.Burns 7) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Baeckea sp. Wialki (G.M. Storr s.n. 4/10/1958) replace: Baeckea sp. Wialki (G.M.Storr s.n. 4/10/1958) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1348,19 +1196,10 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: subspecies -- find: Banksia sp. Boyup Brook (L.W. Sage LWS 2366) - replace: Banksia sp. Boyup Brook (L.W.Sage LWS 2366) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Baumea preissii subsp. laxa replace: Baumea preissii subsp. laxa MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Baumea preissii subsp. preissii - replace: Baumea preissii - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Baumea preissii subsp. preissii ms replace: Baumea preissii reason: match_14. Automatic alignment with species-level name known by APC when @@ -1395,43 +1234,10 @@ taxonomic_updates: replace: Boronia crenulata var. angustifolia reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: variety -- find: Boronia sp. Leeuwin (J. Scott 235) - replace: Boronia sp. Leeuwin (J.Scott 235) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Boronia sp. Location 4264 (R. Turner s.n.) - replace: Boronia sp. Location 4264 (R.Turner s.n., 23 Sept. 1999) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Borya sp. Wheatbelt (A.S. George 16470) replace: Borya sp. Wheatbelt (A.S.George 16470) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Bossiaea sp. Bremer (K. Newbey 2980) - replace: Bossiaea sp. Bremer (K.Newbey 2980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Frankland (E.M. Sandiford EMS 896) - replace: Bossiaea sp. Frankland (E.M.Sandiford EMS 896) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Jackson Range (G. Cockerton & S. McNee LCS 13614) - replace: Bossiaea sp. Jackson Range (G.Cockerton & S.McNee LCS 13614) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Bossiaea sp. Waroona (B.J. Keighery & N. Gibson 229) - replace: Bossiaea sp. Waroona (B.J.Keighery & N.Gibson 229) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Brassica xjuncea - replace: Brassica x juncea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Brassica xnapus - replace: Brassica x napus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Brunonia sp. Long hairs (D.E. Symon 2440) replace: Brunonia sp. Long Hairs (D.E.Symon 2440) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1441,10 +1247,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Caesia sp. Koolanooka Hills (R. Meissner & Y. Caruso 78) - replace: Caesia sp. Koolanooka Hills (R. Meissner & Y. Caruso 78) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Caesia sp. Wheatbelt (A.J.M. Hopkins 353) replace: Caesia sp. Wheatbelt (A.J.M. Hopkins 353) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -1461,94 +1263,6 @@ taxonomic_updates: replace: Caladenia sp. Wyalkatchem (G.B.Brockman GBB 661) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Caladenia xaestantha - replace: Caladenia x aestantha - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xcala - replace: Caladenia x cala - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xcoactescens - replace: Caladenia x coactescens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xeludens - replace: Caladenia x eludens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xenigma - replace: Caladenia x enigma - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xericksoniae - replace: Caladenia x ericksoniae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xerminea - replace: Caladenia x erminea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xexoleta - replace: Caladenia x exoleta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xexserta - replace: Caladenia x exserta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xhypata - replace: Caladenia x hypata - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xidiastes - replace: Caladenia x idiastes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xlavandulacea - replace: Caladenia x lavandulacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xornata - replace: Caladenia x ornata - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xresupina - replace: Caladenia x resupina - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xspectabilis - replace: Caladenia x spectabilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xsuffusa - replace: Caladenia x suffusa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xtriangularis - replace: Caladenia x triangularis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Caladenia xtryphera - replace: Caladenia x tryphera - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Bungalbin (G.J. Keighery & N. Gibson 1656) - replace: Calandrinia sp. Bungalbin (G.J.Keighery & N.Gibson 1656) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Coolcalalaya (G.J. Keighery & N. Gibson 698) - replace: Calandrinia sp. Coolcalalaya (G.J.Keighery & N.Gibson 698) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Kenwick (G.J. Keighery 10905) - replace: Calandrinia sp. Kenwick (G.J.Keighery 10905) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Calandrinia sp. Needilup (K.R. Newbey 4892) - replace: Calandrinia sp. Needilup (K.R.Newbey 4892) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Calandrinia sp. Ongerup (K.R. Newbey 11834) replace: Calandrinia sp. Ongerup (K.R.Newbey 11834) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1557,10 +1271,6 @@ taxonomic_updates: replace: Calandrinia sp. Piawaning (A.C.Beauglehole 12257) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Calandrinia sp. The Pink Hills (F. Obbens FO 19/06) - replace: Calandrinia sp. The Pink Hills (F.Obbens FO 19/06) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Calectasia grandiflora subsp. Wheatbelt replace: Calectasia grandiflora (Wheatbelt variant) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -1587,10 +1297,6 @@ taxonomic_updates: replace: Calocephalus sp. Pilbara-Desert (M.E.Trudgen 11454) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Calocephalus sp. Wittenoom (A.S. George 1082) - replace: Calocephalus sp. Wittenoom (A.S.George 1082) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Calochilus sp. Hopetoun (H. Taylor s.n.) replace: Calochilus sp. Hopetoun (H.Taylor s.n.) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1652,22 +1358,10 @@ taxonomic_updates: replace: Calytrix sp. Wheatbelt (R.Davis 4544) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Canna xgeneralis - replace: Canna x generalis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Canna xorchiodes - replace: Canna x orchiodes - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Cardamine sp. Jandakot (P. Luff s.n. 4/7/1969) replace: Cardamine sp. Jandakot (P.Luff s.n. 4/7/1969) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Carpobrotus sp. Thevenard Island (M. White 050) - replace: Carpobrotus sp. Thevenard Island (M.White 050) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Cartonema sp. A Kimberley Flora (S.J. Forbes 2163) replace: Cartonema sp. A Kimberley Flora (S.J.Forbes 2163) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1699,10 +1393,6 @@ taxonomic_updates: replace: Chamelaucium pauciflorum subsp. thryptomenoides reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Chamelaucium sp. Yalgoo (Y. Chadwick 1816) - replace: Chamelaucium sp. Yalgoo (Y.Chadwick 1816) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Chrysopogon sp. Zuytdorp (G.J. Keighery & N. Gibson 906) replace: Chrysopogon sp. Zuytdorp (G.J.Keighery & N.Gibson 906) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1727,39 +1417,11 @@ taxonomic_updates: replace: Commersonia sp. Mount Groper (R.Cranfield & D.Kabay 9157) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Conostylis candicans var. xleptophylla - replace: Conostylis candicans var. x leptophylla - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety - find: Conostylis seorsiflora subsp. Nyabing replace: Conostylis seorsiflora subsp. Nyabing (A.Coates s.n. 2/10/1998) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Corchorus sp. Fitzroy Crossing (A.J. Ewart s.n. PERTH 01526790) - replace: Corchorus sp. Fitzroy Crossing (A.J.Ewart s.n. PERTH 01526790) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Hamersley Range (S. van Leeuwen 3586) - replace: Corchorus sp. Hamersley Range (S.van Leeuwen 3586) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corchorus sp. Yarrie (J. Bull & D. Roberts CAL 01.05) - replace: Corchorus sp. Yarrie (J.Bull & D.Roberts CAL 01.05) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Corymbia candida subsp. xlautifolia - replace: Corymbia candida subsp. x lautifolia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Corymbia xopacula - replace: Corymbia x opacula - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Corymbia xpedimontana - replace: Corymbia x pedimontana - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Craspedia arenicola replace: Craspedia arenicola MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1768,10 +1430,6 @@ taxonomic_updates: replace: Craspedia argillicola MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Crocosmia xcrocosmiiflora - replace: Crocosmia x crocosmiiflora - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Crotalaria sp. Chichester Tablelands (A.A. Mitchell PRP226) replace: Crotalaria sp. Chichester Tablelands (A.A.Mitchell PRP226) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1781,10 +1439,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Cucumis sp. Bunbury (G. Brayshaw s.n. 26/2/91) - replace: Cucumis sp. Bunbury (G.Brayshaw s.n. 26/2/91) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Cyathostemon sp. Dowak (J.M. Fox 86/271) replace: Cyathostemon sp. Dowak (J.M.Fox 86/271) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -1797,10 +1451,6 @@ taxonomic_updates: replace: Cyathostemon sp. Salmon Gums (B.Archer 769) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Cynanchum sp. Hamersley (M. Trudgen 2302) - replace: Cynanchum sp. Hamersley (M.Trudgen 2302) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Dampiera angulata subsp. Peak Charles replace: Dampiera angulata subsp. Peak Charles (K.R.Newbey 5402) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -1928,30 +1578,14 @@ taxonomic_updates: replace: Daviesia eurylobos reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Dicarpidium sp. A Kimberley Flora (K.F. Kenneally 8686) - replace: Dicarpidium sp. A Kimberley Flora (K.F.Kenneally 8686) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Dicarpidium sp. B Kimberley Flora (G.J. Keighery 10138) replace: Dicarpidium sp. B Kimberley Flora (G.J.Keighery 10138) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Dicarpidium sp. Mt Leake (T. Willing 469) - replace: Dicarpidium sp. Mt Leake (T.Willing 469) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Dicrastylis sp. Cue (A.A. Mitchell 764) replace: Dicrastylis sp. Cue (A.A.Mitchell 764) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Dicrastylis sp. Denham (M. Lewis 42/92) - replace: Dicrastylis sp. Denham (M.Lewis 42/92) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dicrastylis sp. Peron Peninsula (M.E. Trudgen 7373) - replace: Dicrastylis sp. Peron Peninsula (M.E.Trudgen 7373) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Digitaria sp. Carson River (A.A. Mitchell 4387) replace: Digitaria sp. Carson River (A.A.Mitchell 4387) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1964,14 +1598,6 @@ taxonomic_updates: replace: Dillwynia sp. Coolgardie (V.E.Sands 637.3.1) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Dillwynia sp. Coujinup Hill (M.A. Burgman 1560) - replace: Dillwynia sp. Coujinup Hill (M.A.Burgman 1560) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Dillwynia sp. Northern Sandplains (M. Hislop 3278) - replace: Dillwynia sp. Northern Sandplains (M.Hislop 3278) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Diuris sp. Arrowsmith (K.W. Dixon 924) replace: Diuris sp. Arrowsmith (K.W.Dixon 924) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -1980,22 +1606,10 @@ taxonomic_updates: replace: Diuris sp. Eneabba (A.H.Burbidge 3941) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Drosera xbadgerupii - replace: Drosera x badgerupii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Drosera xsidjamesii - replace: Drosera x sidjamesii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Drummondita rubroviridis replace: Drummondita rubriviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Drummondita sp. Trayning (A.M. George 97) - replace: Drummondita sp. Trayning (A.M.George 97) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Echinochloa crusgalli replace: Echinochloa crus-galli reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2008,10 +1622,6 @@ taxonomic_updates: replace: Eleocharis sp. B Kimberley Flora (K.F.Kenneally 8272) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Elythranthera xintermedia - replace: Elythranthera x intermedia - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Enekbatus roseus replace: Enekbatus roseus MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2030,14 +1640,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Eremaea xcodonocarpa - replace: Eremaea x codonocarpa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eremaea xphoenicea - replace: Eremaea x phoenicea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Eremophila sp. Mt Jackson (G.J. Keighery 4372) replace: Eremophila sp. Mt Jackson (G.J.Keighery 4372) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2080,28 +1682,10 @@ taxonomic_updates: replace: Eryngium pinnatifidum subsp. umbraphilum MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Eryngium sp. Lake Muir (E. Wittwer 2293) - replace: Eryngium sp. Lake Muir (E.Wittwer 2293) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Erythrina xsykesii - replace: Erythrina x sykesii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus absita x loxophleba - replace: Eucalyptus absita x Eucalyptus loxophleba - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus absita x loxophleba replace: Eucalyptus absita x Eucalyptus loxophleba reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Eucalyptus aspersa x falcata - replace: Eucalyptus aspersa x Eucalyptus falcata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus aspersa x falcata replace: Eucalyptus x [Eucalyptus aspersa x falcata] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -2112,26 +1696,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Eucalyptus buprestium x erectifolia - replace: Eucalyptus buprestium x Eucalyptus erectifolia - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x ligulata - replace: Eucalyptus buprestium x Eucalyptus ligulata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x marginata - replace: Eucalyptus buprestium x Eucalyptus marginata - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus buprestium x staeri - replace: Eucalyptus buprestium x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus buprestium x erectifolia replace: Eucalyptus x [Eucalyptus buprestium x erectifolia] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -2151,11 +1715,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus dielsii x platypus - replace: Eucalyptus dielsii x Eucalyptus platypus - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus dielsii x platypus replace: Eucalyptus dielsii x Eucalyptus platypus reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -2165,36 +1724,16 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-21) taxonomic_resolution: variety -- find: Eucalyptus loxophleba x wandoo - replace: Eucalyptus loxophleba x Eucalyptus wandoo - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus loxophleba x wandoo replace: Eucalyptus x [Eucalyptus loxophleba x wandoo] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus macrocarpa x pyriformis - replace: Eucalyptus macrocarpa x Eucalyptus pyriformis - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus macrocarpa x pyriformis replace: Eucalyptus x [Eucalyptus macrocarpa x pyriformis] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus marginata x megacarpa - replace: Eucalyptus marginata x Eucalyptus megacarpa - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus marginata x pachyloma - replace: Eucalyptus marginata x Eucalyptus pachyloma - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus marginata x megacarpa replace: Eucalyptus x [Eucalyptus marginata x megacarpa] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -2214,20 +1753,11 @@ taxonomic_updates: replace: Eucalyptus oldfieldii reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Eucalyptus preissiana x staeri - replace: Eucalyptus preissiana x Eucalyptus staeri - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Eucalyptus preissiana x staeri replace: Eucalyptus x [Eucalyptus preissiana x staeri] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-22) taxonomic_resolution: genus -- find: Eucalyptus rhodantha var. xpetiolaris - replace: Eucalyptus rhodantha var. x petiolaris - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety - find: Eucalyptus sargentii subsp. onesia replace: Eucalyptus sargentii subsp. onesis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2291,66 +1821,6 @@ taxonomic_updates: replace: Eucalyptus erectifolia reason: Manual match with APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Eucalyptus xbalanites - replace: Eucalyptus x balanites - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbennettiae - replace: Eucalyptus x bennettiae - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xbrachyphylla - replace: Eucalyptus x brachyphylla - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xcarnabyi - replace: Eucalyptus x carnabyi - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xchrysantha - replace: Eucalyptus x chrysantha - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xerectifolia - replace: Eucalyptus erectifolia - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xerythrandra - replace: Eucalyptus x erythrandra - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus ximpensa - replace: Eucalyptus x impensa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xkalganensis - replace: Eucalyptus x kalganensis - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xlateritica - replace: Eucalyptus x lateritica - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xmissilis - replace: Eucalyptus x missilis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xmundijongensis - replace: Eucalyptus x mundijongensis - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xphylacis - replace: Eucalyptus x phylacis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xstoataptera - replace: Eucalyptus x stoataptera - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eucalyptus xtetragona - replace: Eucalyptus x tetragona - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Euphorbia drummondii subsp. drummondii replace: Euphorbia drummondii var. drummondii reason: match_06. Automatic alignment with synonymous term among known canonical @@ -2369,10 +1839,6 @@ taxonomic_updates: replace: Eutaxia epacridoides subsp. sparsifolia MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Eutaxia neurocalyx subsp. hirsuta - replace: Eutaxia neurocalyx subsp. hirsuta MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies - find: Eutaxia neurocalyx subsp. leptophylla replace: Eutaxia neurocalyx subsp. leptophylla MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2381,15 +1847,6 @@ taxonomic_updates: replace: Eutaxia neurocalyx subsp. major MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Eutaxia sp. Jasper Hill (R.J. Cranfield 8607) - replace: Eutaxia sp. Jasper Hill (R.J.Cranfield 8607) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Eutaxia sp. North Ironcap (P. Armstrong PA 06/898) - replace: Eutaxia sp. North Ironcap (P.Armstrong et al. 06/898) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species - find: Festulolium loliaceum replace: Lolium arundinaceum subsp. arundinaceum reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -2479,18 +1936,6 @@ taxonomic_updates: replace: Gastrolobium wonganensis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A. Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Binnu (K.A.Shepherd & J. Wege KS 1301) - replace: Geleznowia sp. Binnu (K.A.Shepherd & J.Wege KS 1301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Geleznowia sp. Marchagee (A. Crawford ADC 1353) - replace: Geleznowia sp. Marchagee (A.Crawford ADC 1353) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Geleznowia verrucosa subsp. Kalbarri replace: Geleznowia verrucosa subsp. Kalbarri (L.M.Broadhurst 123) L.M.Broadh. reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -2509,30 +1954,10 @@ taxonomic_updates: replace: Genus sp. Nillup (R.D.Royce 98) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Glycine aphyonota - replace: Glycine aphyonotos - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Glycine lactovirens - replace: Glycine lactivirens - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gnephosis sp. Billabong (B. Nordenstam & A. Anderberg 203) - replace: Gnephosis sp. Billabong (B.Nordenstam & A.Anderberg 203) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Gnephosis sp. Norseman (K.R. Newbey 8096) replace: Gnephosis sp. Norseman (K.R.Newbey 8096) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Gnephosis sp. Pt Quobba (P.G. Wilson 12622) - replace: Gnephosis sp. Pt Quobba (P.G.Wilson 12622) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Gompholobium sp. Stirling Range (C.F. Wilkins et al. CW 2513) - replace: Gompholobium sp. Stirling Range (C.F.Wilkins et al. CW 2513) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Gomphrena sp. Belele (D.W. Goodall 3215) replace: Gomphrena sp. Belele (D.W.Goodall 3215) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2564,10 +1989,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: subspecies -- find: Goodenia pulchella subsp. Coastal Plain B - replace: Goodenia pulchella subsp. Coastal Plain B (L.W.Sage 2336) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: subspecies - find: Goodenia pulchella subsp. Dragon Rocks replace: Goodenia pulchella subsp. Dragon Rocks (A.M.Coates 3374) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -2591,10 +2012,6 @@ taxonomic_updates: replace: Goodenia sp. Beyondie (L.W.Sage & S.J.van Leeuwen LWS 2518) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Goodenia sp. Carnarvon Range (D.J. Edinger Nats 30) - replace: Goodenia sp. Carnarvon Range (D.J.Edinger Nats 30) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Goodenia sp. Dampier Peninsula (B.J. Carter 675) replace: Goodenia sp. Dampier Peninsula (B.J.Carter 675) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2604,18 +2021,6 @@ taxonomic_updates: reason: match_18. Automatic alignment with infraspecific canonical name in APNI when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Goodenia sp. Little Sandy Desert (A.S. Mitchell 989) - replace: Goodenia sp. Little Sandy Desert (A.S.Mitchell 989) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Mount Bomford (M.D. Barrett 423) - replace: Goodenia sp. Mount Bomford (M.D.Barrett 423) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Goodenia sp. Mt Elvire (D.J. Edinger 1857) - replace: Goodenia sp. Mt Elvire (D.J.Edinger 1857) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Goodenia sp. South Coast (A.R. Annels ARA 1846) replace: Goodenia sp. South Coast (A.R.Annels 1846) reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in @@ -2646,10 +2051,6 @@ taxonomic_updates: replace: Grevillea sp. Gunapin (F.Hort 308) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Grevillea sp. Harrismith (G.J. Keighery & N. Gibson 7094) - replace: Grevillea sp. Harrismith (G.J. Keighery & N. Gibson 7094) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Grevillea sp. Stirling Range (D.J. McGillivray 3488 & A.S. George) replace: Grevillea sp. Stirling Range (D.J.McGillivray 3488 & A.S.George) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) @@ -2658,18 +2059,6 @@ taxonomic_updates: replace: Grevillea tesselata reason: Manual match with APC accepted name (E. Wenk, 2023-05-24) taxonomic_resolution: species -- find: Grevillea sp. Victoria Desert (R. Davis et al. RD 11611) - replace: Grevillea sp. Victoria Desert (R.Davis et al. RD 11611) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea sp. Yerilgee Hills (T. Laslett TL 025) - replace: Grevillea sp. Yerilgee Hills (T.Laslett TL 025) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Grevillea squiresae - replace: Grevillea squiresiae - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Grevillea synapheae subsp. A Flora of Australia replace: Grevillea synapheae subsp. A Flora of Australia (S.D.Hopper 6333) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -2704,18 +2093,6 @@ taxonomic_updates: replace: Hakea cygnus subsp. needlei reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Hakea sp. Great Victoria Desert (L. Cockram LAC 139) - replace: Hakea sp. Great Victoria Desert (L.Cockram LAC 139) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (B. Keighery 2599) - replace: Hakea sp. Walyunga (B.Keighery 2599) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hakea sp. Walyunga (L. Penn s.n.) - replace: Hakea sp. Walyunga (L.Penn s.n.) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hakea sp. Yalgorup (B.J. Keighery & N. Gibson 897) replace: Hakea sp. Yalgorup (B.J.Keighery & N.Gibson 897) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2771,30 +2148,6 @@ taxonomic_updates: replace: Halosarcia sp. Lake Moore (M.N.Lyons 2603) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Harmsiodoxa sp. Eremaean (A.S. George 3894) - replace: Harmsiodoxa sp. Eremaean (A.S.George 3894) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Bachsten Creek (R.L. Barrett & M.D. Barrett RLB 3808) - replace: Helicteres sp. Bachsten Creek (R.L.Barrett & M.D.Barrett RLB 3808) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Carson River (I. Cowie & Wendell IC 4232) - replace: Helicteres sp. Carson River (I.Cowie & Wendell IC 4232) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Manning Peak (K.F. Kenneally 10266 & B.P.M. Hyland) - replace: Helicteres sp. Manning Peak (K.F.Kenneally 10266 & B.P.M.Hyland) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mertens Falls (K.F. Kenneally 7887) - replace: Helicteres sp. Mertens Falls (K.F.Kenneally 7887) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Helicteres sp. Mt Shadforth (I.R. Telford 11609) - replace: Helicteres sp. Mt Shadforth (I.R.Telford 11609) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hemiandra glabra subsp. glabra ms replace: Hemiandra glabra reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -2876,10 +2229,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-21) taxonomic_resolution: species -- find: Hibbertia sp. Kojonup (C.M. Lewis 288) - replace: Hibbertia sp. Kojonup (C.M.Lewis 288) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hibbertia sp. Tathra (M.A. Langley & J.M. Harvey 1873) replace: Hibbertia sp. Tathra (M.A.Langley & J.M.Harvey 1873) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -2893,26 +2242,6 @@ taxonomic_updates: replace: Hibiscus sp. B Kimberley Flora (P.G.Wilson 11143) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Hibiscus sp. Canga (P.J.H. Hurter & J. Naaykens 11013) - replace: Hibiscus sp. Canga (P.J.H.Hurter & J.Naaykens 11013) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Brockman (E. Thoma ET 1354) - replace: Hibiscus sp. Mt Brockman (E.Thoma ET 1354) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Mt Robinson (G. Byrne 3537) - replace: Hibiscus sp. Mt Robinson (G.Byrne 3537) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Theda (M.D. Barrett & R.L. Barrett MDB 2144) - replace: Hibiscus sp. Theda (M.D.Barrett & R.L.Barrett MDB 2144) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hibiscus sp. Wonganoo Station (K. Boladeras 125) - replace: Hibiscus sp. Wonganoo Station (K.Boladeras 125) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hybanthus floribundus subsp. Hill River replace: Hybanthus floribundus subsp. Hill River (E.M.Bennett 2252) reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -2926,30 +2255,10 @@ taxonomic_updates: replace: Hydrocotyle coorowensis MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Hydrocotyle coraginaensis - replace: Hydrocotyle coraginaensis MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hydrocotyle crassipes replace: Hydrocotyle crassipes MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Hydrocotyle decipiens - replace: Hydrocotyle decipiens MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle hexaptera - replace: Hydrocotyle hexaptera MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle sp. Truslove (M.A. Burgman 4419) - replace: Hydrocotyle sp. Truslove (M.A.Burgman 4419) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Hydrocotyle sp. Warriedar (P.G. Wilson 12267) - replace: Hydrocotyle sp. Warriedar (P.G.Wilson 12267) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hydrocotyle vigintimilia replace: Hydrocotyle vigintimilia MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -2964,10 +2273,6 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Hypocalymma sp. Cascade (R. Bruhn 20896) - replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Hypocalymma sp. Cataby (G.J. Keighery 5151) replace: Hypocalymma sp. Cataby (G.J.Keighery 5151) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -2989,22 +2294,10 @@ taxonomic_updates: replace: Indigofera sp. A Kimberley Flora (G.J.Keighery & N.Gibson 70) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Indigofera sp. Bungaroo Creek (S. van Leeuwen 4301) - replace: Indigofera sp. Bungaroo Creek (S.van Leeuwen 4301) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Indigofera sp. Mackinlayi (A.A. Mitchell 7086) - replace: Indigofera sp. Mackinlayi (A.A.Mitchell 7086) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Indigofera sp. Warburton (A.A. Munir 5209) replace: Indigofera sp. Warburton (A.A.Munir 5209) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Ipomoea sp. A Kimberley Flora (L.J. Penn 84) - replace: Ipomoea sp. A Kimberley Flora (L.J.Pen 84) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Ipomoea sp. Kalumburu (A.A. Mitchell 3869B) replace: Ipomoea sp. Kalumburu (A.A.Mitchell 3869B) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3013,18 +2306,6 @@ taxonomic_updates: replace: Isopogon sp. Canning Reservoir (M.D.Tindale 121 & B.R.Maslin) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Isopogon sp. Darling Range (F. Hort 1662) - replace: Isopogon sp. Darling Range (F.Hort 1662) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Fitzgerald River (D.B. Foreman 813) - replace: Isopogon sp. Fitzgerald River (D.B.Foreman 813) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Isopogon sp. Ravensthorpe (D.B. Foreman 1207) - replace: Isopogon sp. Ravensthorpe (D.B.Foreman 1207) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Isopogon sp. Watheroo (D. Foreman 477) replace: Isopogon sp. Watheroo (D.Foreman 477) reason: match_12. Automatic alignment with infraspecific canonical name in APC known @@ -3044,18 +2325,10 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC (2022-11-22) taxonomic_resolution: variety -- find: Isotropis sp. Arid zone (G. Byrne 2775) - replace: Isotropis iophyta - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Isotropis sp. Shark Bay (M.E. Trudgen 7170) replace: Isotropis sp. Shark Bay (M.E.Trudgen 7170) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Isotropis sp. Yalgoo (S. Patrick 2375) - replace: Isotropis petrensis - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species - find: Jasminum sp. Exmouth (G. Marsh 77) replace: Jasminum sp. Exmouth (G.Marsh 77) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3068,23 +2341,10 @@ taxonomic_updates: replace: Josephinia sp. Mt Edgar Station (N.T.Burbidge 1194) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Kennedia sp. South coast (T.R. Lally 1576 & I.P. Lally) - replace: Kennedia sp. south coast (T.R.Lally 1576 & I.P.Lally) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Keraudrenia adenogyna replace: Keraudrenia adenogyna MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. cacaobrunnea ms - replace: Keraudrenia cacaobrunnea MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Keraudrenia cacaobrunnea subsp. undulata - replace: Keraudrenia cacaobrunnea subsp. undulata MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies - find: Keraudrenia saxatilis replace: Keraudrenia saxatilis MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3126,70 +2386,14 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Lasiopetalum sp. Badgingarra (E.A. Griffin 5278) - replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E. Ried 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Coorow (E.Reid 101) - replace: Lasiopetalum sp. Coorow (E.Ried 101) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Denmark (B.G. Hammersley 2012) - replace: Lasiopetalum sp. Denmark (B.G.Hammersley 2012) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Desmond (N. McQuoid 653) - replace: Lasiopetalum sp. Desmond (N.McQuoid 653) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Hill River (T.N. Stoate 5) - replace: Lasiopetalum sp. Hill River (T.N.Stoate 5) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Kukerin (C.A. Gardner 13646) - replace: Lasiopetalum sp. Kukerin (C.A.Gardner 13646) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Caroline (S.D. Hopper SDH 6381) - replace: Lasiopetalum sp. Mount Caroline (S.D.Hopper SDH 6381) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mount Lesueur (E.A. Griffin 1997) - replace: Lasiopetalum sp. Mount Lesueur (E.A.Griffin 1997) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Mt Ragged (T.E.H. Aplin 4349) - replace: Lasiopetalum sp. Mt Ragged (T.E.H.Aplin 4349) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Lasiopetalum sp. Northam (F. Hort 1196) replace: Lasiopetalum sp. Northam (F.Hort 1196) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Lasiopetalum sp. Toodyay (F. Hort 2689) - replace: Lasiopetalum sp. Toodyay (F.Hort 2689) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Watheroo (K. Shepherd & C. Wilkins KS 220) - replace: Lasiopetalum erectifolium - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Lasiopetalum sp. Weam Reserve (M. Hislop 2755) - replace: Lasiopetalum sp. Weam Reserve (M.Hislop 2755) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Latrobea pinnacula replace: Latrobea pinnaculum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Latrobea sp. South Coast (A.M. Ashby 1949) - replace: Latrobea sp. South Coast (A.M.Ashby 1949) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Lawrencia sp. Anna Plains (N.T. Burbidge 1433) replace: Lawrencia sp. Anna Plains (N.T.Burbidge 1433) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) @@ -3236,10 +2440,6 @@ taxonomic_updates: replace: Leptospermum sp. Peak Charles/Norseman (K.R.Newbey 5243) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Leucanthemum xsuperbum - replace: Leucanthemum x superbum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Leucopogon compressicarpus replace: Leucopogon compressicarpus MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3463,19 +2663,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-21) taxonomic_resolution: subspecies -- find: Lolium xhubbardii - replace: Lolium x hubbardii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Lysinema ciliatum forma - replace: Lysinema ciliatum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: species -- find: Maireana sp. Patience (C.P. Campbell 1052) - replace: Maireana sp. Patience (C.P.Campbell 1052) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Malleostemon sp. Adelong (G.J. Keighery 11825) replace: Malleostemon sp. Adelong (G.J.Keighery 11825) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3532,11 +2719,6 @@ taxonomic_updates: replace: Maytenus sp. Mt Windell (S.van Leeuwen 846) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Meeboldina decipiens subsp. decipiens - replace: Meeboldina decipiens MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Meeboldina decipiens subsp. decipiens ms replace: Leptocarpus decipiens reason: Manual match with accepted name (E. Wenk, 2023-05-24) @@ -3546,34 +2728,10 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Melaleuca sp. Dongolocking (G.J. Keighery & N. Gibson 2896) - replace: Melaleuca sp. Dongolocking (G.J.Keighery & N.Gibson 2896) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Melaleuca sp. Gorse (A.S. George 7224) replace: Melaleuca sp. Gorse (A.S.George 7224) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Melaleuca xarenicola - replace: Melaleuca x arenicola - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mentha xpiperita - replace: Mentha x piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mentha xpiperita var. citrata - replace: Mentha x piperita var. citrata - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: variety -- find: Mentha xpiperita var. piperita - replace: Mentha x piperita var. piperita - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: variety -- find: Merremia sp. B Kimberley Flora (B.J. Carter 533) - replace: Merremia sp. B Kimberley Flora (B.J.Carter 533) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Microcorys sp. Boxwood (K.R. Newbey 4200) replace: Microcorys sp. Boxwood (K.R.Newbey 4200) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3598,11 +2756,6 @@ taxonomic_updates: replace: Microcorys sp. stellate (A.Strid 21885) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Micromyrtus racemosa var. Jingemarra - replace: Micromyrtus racemosa var. Jingemarra (R.J.Cranfield 5253a) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety - find: Micromyrtus racemosa var. north-west replace: Micromyrtus racemosa var. north-west (R.J.Cranfield 2891) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) @@ -3636,14 +2789,6 @@ taxonomic_updates: replace: Mirbelia magentea MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Mirbelia sp. Bursarioides (T.R. Lally 760) - replace: Mirbelia sp. Bursarioides (T.R.Lally 760) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Carnarvon (J.S. Beard 6008) - replace: Mirbelia sp. Carnarvon (J.S.Beard 6008) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mirbelia sp. Denham (W.E. Blackall 556) replace: Mirbelia sp. Denham (W.E.Blackall 556) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3656,22 +2801,10 @@ taxonomic_updates: replace: Mirbelia sp. Kalbarri (M.D.Crisp 6261) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Mirbelia sp. Magentea (T.E.H. Aplin 5976) - replace: Mirbelia sp. Magentea (T.E.H.Aplin 5976) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mirbelia sp. Mt Heywood (T.E.H. Aplin 4154) replace: Mirbelia sp. Mt Heywood (T.E.H.Aplin 4154) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Mirbelia sp. Ternata (M.D. Crisp & L.G. Cook MDC 9267) - replace: Mirbelia sp. Ternata (M.D.Crisp & L.G.Cook MDC 9267) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Mirbelia sp. Zuytdorp (G.J. Keighery & N. Gibson 1688) - replace: Mirbelia sp. Zuytdorp (G.J.Keighery & N.Gibson 1688) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mirbelia sp. hooked keel (M.D. Crisp 8519 & W. Keys) replace: Mirbelia sp. hooked keel (M.D.Crisp 8519 & W.Keys) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3691,10 +2824,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Mukia sp. A Kimberley Flora (K.F. Kenneally 7909) - replace: Mukia sp. A Kimberley Flora (K.F.Kenneally 7909) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Mukia sp. D Flora of Australia (A.A. Mitchell PRP 1121) replace: Mukia sp. D Flora of Australia (A.A.Mitchell PRP 1121) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3703,10 +2832,6 @@ taxonomic_updates: replace: Oldenlandia sp. Hamersley Station (A.A.Mitchell PRP 1479) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Olearia brachyglossa - replace: Olearia brachyglossa MS - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Olearia dampieri replace: Olearia dampieri MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3720,10 +2845,6 @@ taxonomic_updates: replace: Olearia dampieri subsp. eremicola MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: subspecies -- find: Ornithogalum longebracteatum - replace: Ornithogalum longibracteatum - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Otion microphyllum replace: Otion microphyllum MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3764,14 +2885,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Pelargonium xasperum - replace: Pelargonium x asperum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pelargonium xdomesticum - replace: Pelargonium x domesticum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Pentalepis sp. Mt House (E.M. Bennett 1877) replace: Pentalepis sp. Mt House (E.M.Bennett 1877) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3793,22 +2906,6 @@ taxonomic_updates: replace: Petrophile squamata subsp. squamata MS reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) taxonomic_resolution: subspecies -- find: Petunia xhybrida - replace: Petunia x hybrida - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Mt Gibbs (G.F. Craig 6658) - replace: Phebalium sp. Mt Gibbs (G.F.Craig 6658) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Phebalium sp. Yerilgee Sandplain (J. Jackson 223) - replace: Phebalium sp. Yerilgee Sandplain (J.Jackson 223) - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-21) - taxonomic_resolution: species -- find: Philotheca sp. Latham (F. Keast L4B 043) - replace: Philotheca sp. Latham (F.Keast L4B 043) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Philotheca spicata subsp. Moore River National Park replace: Philotheca spicata subsp. Moore River National Park (G. & D.Woodman Op 47) @@ -3819,10 +2916,6 @@ taxonomic_updates: replace: Phyllanthus sp. D Kimberley Flora (C.R.Dunlop 5302) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pilostyles sp. Northern Sandplains (P. Armstrong s.n. PERTH 06590179) - replace: Pilostyles sp. Northern Sandplains (P.Armstrong s.n. PERTH 06590179) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Pimelea sp. Tarin Rock (E.J. Croxford 2118) replace: Pimelea sp. Tarin Rock (E.J.Croxford 2118) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3835,10 +2928,6 @@ taxonomic_updates: replace: Plantago sp. Mt Magnet (A.S.George 6793) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Platanus xhispanica - replace: Platanus x hispanica - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Platysace sp. Eneabba (R. Hnatiuk 770001) replace: Platysace sp. Eneabba (R.Hnatiuk 770001) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -3859,10 +2948,6 @@ taxonomic_updates: replace: Pluchea sp. B Kimberley Flora (K.F.Kenneally 9526A) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Podolepis sp. Carnarvon Range (D.J. Edinger Nats 33) - replace: Podolepis sp. Carnarvon Range (D.J.Edinger Nats 33) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Podolepis sp. Great Victoria Desert (A.S. George 8219) replace: Podolepis sp. Great Victoria Desert (A.S.George 8219) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3879,10 +2964,6 @@ taxonomic_updates: replace: Polygala sp. B Kimberley Flora (T.E.H.Aplin et al. 715) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Polymeria sp. A Kimberley Flora (T.E.H. Aplin et al. 418) - replace: Polymeria sp. A Kimberley Flora (T.E.H.Aplin et al. 418) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Pomax sp. desert (A.S. George 11968) replace: Pomax sp. desert (A.S.George 11968) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3891,11 +2972,6 @@ taxonomic_updates: replace: Poranthera sp. Kings Park (R.L.Barrett 2958) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Prosopis glandulosa x velutina - replace: Prosopis glandulosa x Prosopis velutina - reason: Manual alignment with canonical hybrid species name in APC (Elizabeth Wenk, - 2022-11-21) - taxonomic_resolution: species - find: Prosopis glandulosa x velutina replace: Prosopis x [Prosopis glandulosa x Prosopis velutina] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -3921,19 +2997,10 @@ taxonomic_updates: replace: Pterostylis sp. Cape Le Grand (I.Solomon 550) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pterostylis sp. Helena River (G. Brockman GBB 340) - replace: Pterostylis sp. Helena River (G.Brockman GBB 340) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Pterostylis sp. Karri forest (W. Jackson BJ270) replace: Pterostylis sp. Karri forest (W.Jackson BJ270) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pterostylis sp. Northampton (S.D. Hopper 3349) - replace: Pterostylis sp. (Northampton) S.D.Hopper 3349 - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Pterostylis sp. Ongerup (K.R. Newbey 4874) replace: Pterostylis sp. Ongerup (K.R.Newbey 4874) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3962,14 +3029,6 @@ taxonomic_updates: replace: Pterostylis sp. crinkled leaf (G.J.Keighery 13426) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pterostylis sp. dainty brown (N. Gibson & M. Lyons 3690) - replace: Pterostylis sp. dainty brown (N.Gibson & M.Lyons 3690) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pterostylis sp. elegant snail orchid (G. Brockman GBB 1194) - replace: Pterostylis sp. elegant snail orchid (G.Brockman GBB 1194) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Pterostylis sp. exserted labellum (A.C. Beauglehole 12194) replace: Pterostylis sp. exserted labellum (A.C.Beauglehole 12194) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -3998,11 +3057,6 @@ taxonomic_updates: replace: Pterostylis sp. limestone (B.J.Keighery & G.J.Keighery 65) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pterostylis sp. mid-west coast (G. Brockman GBB134) - replace: Pterostylis sp. mid-west coast (G.Brockman GBB134) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-21) - taxonomic_resolution: species - find: Pterostylis sp. miniature (J.R. Wheeler 3298) replace: Pterostylis sp. miniature (J.R.Wheeler 3298) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4015,10 +3069,6 @@ taxonomic_updates: replace: Pterostylis sp. robust (W.Jackson BJ294) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pterostylis sp. scooped sepals (G. Brockman GBB386) - replace: Pterostylis sp. scooped sepals (G.Brockman GBB386) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Pterostylis sp. short sepals (W. Jackson BJ259) replace: Pterostylis sp. short sepals (W.Jackson BJ259) reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) @@ -4040,11 +3090,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-21) taxonomic_resolution: variety -- find: Ptilotus humilis subsp. parviflorus - replace: Ptilotus humilis var. parviflorus - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-21) - taxonomic_resolution: variety - find: Ptilotus sp. Beaufort River (G.J. Keighery 16554) replace: Ptilotus sp. Beaufort River (G.J.Keighery 16554) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4061,10 +3106,6 @@ taxonomic_updates: replace: Ptilotus sp. Northampton (R.Davis 10952) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Ptilotus sp. Porongurup (R. Davis 10805) - replace: Ptilotus sp. Porongurup (R.Davis 10805) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Puccinellia sp. Warren Road (M.N. Lyons 2710) replace: Puccinellia sp. Warren Road (M.N.Lyons 2710) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4073,18 +3114,6 @@ taxonomic_updates: replace: Pultenaea sp. Kundip (G.F.Craig 6008) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (J.S. Beard 7827) - replace: Pultenaea sp. Mt Lesueur (J.S.Beard 7827) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. Mt Lesueur (L.A. Orthia 86) - replace: Pultenaea sp. Mt Lesueur (L.A.Orthia 86) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Pultenaea sp. southern (L.A. Orthia 39) - replace: Pultenaea sp. southern (L.A.Orthia 39) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Rhagodia sp. Watheroo (R.J. Cranfield & P.J. Spencer 8183) replace: Rhagodia sp. Watheroo (R.J.Cranfield & P.J.Spencer 8183) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4105,16 +3134,6 @@ taxonomic_updates: replace: Rhynchospora sp. B Kimberley Flora (A.S.Weston 12363) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Rosa chinensis x moschata - replace: Rosa chinensis x Rosa moschata - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species -- find: Rosa chinensis x multiflora - replace: Rosa chinensis x Rosa multiflora - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-21) - taxonomic_resolution: species - find: Rosa chinensis x moschata replace: Rosa chinensis x Rosa moschata reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in @@ -4125,50 +3144,10 @@ taxonomic_updates: reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Rubus loganobaccus - replace: Rubus loganubaccus - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rubus xloganobaccus - replace: Rubus x loganobaccus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Ruellia sp. A Kimberley Flora (K.F. Kenneally 9007) - replace: Ruellia sp. A Kimberley Flora (K.F.Kenneally 9007) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Rulingia apella replace: Rulingia apella MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Rulingia sp. Trigwell Bridge (R. Smith s.n. 20.6.89) - replace: Rulingia sp. Trigwell Bridge (R.Smith s.n. 20.6.1989) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Rumex xjohannis-moorei - replace: Rumex x johannis-moorei - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species -- find: Rumex xmuretii - replace: Rumex x muretii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xpratensis - replace: Rumex x pratensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xpseudopulcher - replace: Rumex x pseudopulcher - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Rumex xschultzei - replace: Rumex x schultzei - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Salvinia xmolesta - replace: Salvinia x molesta - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Samolus sp. Millstream (M.I.H. Brooker 2076) replace: Samolus sp. Millstream (M.I.H.Brooker 2076) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4239,10 +3218,6 @@ taxonomic_updates: replace: Schoenus sp. Bullsbrook (J.J.Alford 915) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Schoenus sp. Cape Riche Cushion (G.J. Keighery 9922) - replace: Schoenus sp. Cape Riche Cushion (G.J.Keighery 9922) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Schoenus sp. Eneabba (F. Obbens & C. Godden I154) replace: Schoenus sp. Eneabba (F.Obbens & C.Godden I154) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4259,30 +3234,14 @@ taxonomic_updates: replace: Schoenus sp. Grey Rhizome (K.L.Wilson 2922) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Schoenus sp. Jindong (R.D. Royce 2485) - replace: Schoenus sp. Jindong (R.D.Royce 2485) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Schoenus sp. Kalbarri (K.R. Newbey 9352) replace: Schoenus sp. Kalbarri (K.R.Newbey 9352) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Schoenus sp. Mt Barker (G.J. Keighery 9679) - replace: Schoenus sp. Mt Barker (G.J.Keighery 9679) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Schoenus sp. Murchison (K.L. Wilson 2647) replace: Schoenus sp. Murchison (K.L.Wilson 2647) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Schoenus sp. Stirling (G.J. Keighery 3427) - replace: Schoenus sp. Stirling (G.J.Keighery 3427) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Schoenus sp. Toodyay (G.J. Keighery & N. Gibson 2918) - replace: Schoenus sp. Toodyay (G.J.Keighery & N.Gibson 2918) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Schoenus sp. Waroona (G.J. Keighery 12235) replace: Schoenus sp. Waroona (G.J.Keighery 12235) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4355,10 +3314,6 @@ taxonomic_updates: replace: Scholtzia sp. Kalbarri (N.Hoyle 623) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Scholtzia sp. Kojarena (A.M. Ashby 1904) - replace: Scholtzia sp. Kojarena (A.M.Ashby 1904) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Scholtzia sp. Murchison River (A.S. George 7098) replace: Scholtzia sp. Murchison River (A.S.George 7908) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4384,14 +3339,6 @@ taxonomic_updates: replace: Scholtzia sp. Shark Bay (M.E.Trudgen 7429) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S. Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Scholtzia sp. Valentine Road (S.J.Patrick 2142) - replace: Scholtzia sp. Valentine Road (S.Patrick 2142) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Scholtzia sp. Whelarra (M.E. Trudgen 12018) replace: Scholtzia sp. Whelarra (M.E.Trudgen 12018) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4412,31 +3359,11 @@ taxonomic_updates: replace: Sclerolaena sp. Koolanooka Hills (R. Meissner & Y. Caruso 437) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Sclerolaena xgeorgei - replace: Sclerolaena x georgei - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-21) - taxonomic_resolution: species - find: Senna artemisioides subsp. petiolaris replace: Senna artemisioides subsp. x petiolaris reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-21) taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xartemisioides - replace: Senna artemisioides subsp. x artemisioides - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xcoriacea - replace: Senna artemisioides subsp. x coriacea - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna artemisioides subsp. xsturtii - replace: Senna artemisioides subsp. x sturtii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies -- find: Senna glutinosa subsp. xluerssenii - replace: Senna glutinosa subsp. x luerssenii - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: subspecies - find: Senna sp. Austin (A. Strid 20210) replace: Senna sp. Austin (A.Strid 20210) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4461,10 +3388,6 @@ taxonomic_updates: replace: Sida sp. A Kimberley Flora (P.A.Fryxell & L.A.Craven 3900) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. Articulation below (A.A. Mitchell PRP 1605) - replace: Sida sp. Articulation below (A.A.Mitchell PRP1605) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. Barlee Range (S. van Leeuwen 1642) replace: Sida sp. Barlee Range (S.van Leeuwen 1642) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4473,38 +3396,10 @@ taxonomic_updates: replace: Sida sp. Bungle Bungles (M.I.Blackwell 219) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. C Kimberley Flora (T.E.H. Aplin 4982) - replace: Sida sp. C Kimberley Flora (T.E.H.Aplin 4982) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. Carnarvon (P.S. Short 2492) replace: Sida sp. Carnarvon (P.S.Short 2492) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. Excedentifolia (J.L. Egan 1925) - replace: Sida sp. Excedentifolia (J.L.Egan 1925) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces glabrous (H.N. Foote 32) - replace: Sida sp. golden calyces glabrous (H.N.Foote 32) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Golden calyces pubescent (G.J. Leach 1966) - replace: Sida sp. Golden calyces pubescent (G.J.Leach 1966) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Hamersley Range (K. Newbey 10692) - replace: Sida sp. Hamersley Range (K.Newbey 10692) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. L (A.M. Ashby 4202) - replace: Sida sp. L (A.M.Ashby 4202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Pilbara (A.A. Mitchell PRP 1543) - replace: Sida sp. Pilbara (A.A.Mitchell PRP1543) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. Pilbara (S. van Leeuwen 4377) replace: Sida sp. Pilbara (S. van Leeuwen 4377) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) @@ -4513,38 +3408,10 @@ taxonomic_updates: replace: Sida sp. Pindar (A.A.Mitchell 3585) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. Rabbit Flat (B.J. Carter 626) - replace: Sida sp. Rabbit Flat (B.J.Carter 626) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Shovelanna Hill (S. van Leeuwen 3842) - replace: Sida sp. Shovelanna Hill (S.van Leeuwen 3842) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Supplejack Station (T.S. Henshall 2345) - replace: Sida sp. Supplejack Station (T.S.Henshall 2345) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Watarrka (D.E. Albrecht 8672) - replace: Sida sp. Watarrka (D.E.Albrecht 8672) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. Western sand dunes (P.K. Latz 11980) - replace: Sida sp. Western sand dunes (P.K.Latz 11980) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Sida sp. dark green fruits (S. van Leeuwen 2260) - replace: Sida sp. dark green fruits (S.van Leeuwen 2260) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. sand dunes (A.A. Mitchell PRP1208) replace: Sida sp. sand dunes (A.A.Mitchell PRP1208) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/1990) - replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Sida sp. spiciform panicles (E. Leyland s.n. 14/8/90) replace: Sida sp. spiciform panicles (E.Leyland s.n. 14/8/1990) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4561,15 +3428,6 @@ taxonomic_updates: replace: Solanum sp. Boomerang Bay (K.F.Kenneally 10021) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Sorghum bicolor subsp. xdrummondii - replace: Sorghum bicolor - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Sorghum xalmum - replace: Sorghum x almum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Spergularia sp. 5 Leeman (G.J. Keighery & J.J. Alford 488) replace: Spergularia sp. 5 Leeman (G.J.Keighery & J.J.Alford 488) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4578,10 +3436,6 @@ taxonomic_updates: replace: Sphenotoma sp. Stirling Range (P.G.Wilson 4235) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Spinifex xalterniflorus - replace: Spinifex x alterniflorus - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Stackhousia muricata subsp. annual replace: Stackhousia muricata subsp. Annual (W.R.Barker 2172) reason: Manual alignment with canonical subspecies name in APC (Elizabeth Wenk, @@ -4591,10 +3445,6 @@ taxonomic_updates: replace: Stackhousia sp. Swollen gynophore (W.R.Barker 2041) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Stemodia sp. Battle Hill (A.L. Payne 1006) - replace: Stemodia sp. Battle Hill (A.L.Payne 1006) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Stemodia sp. Onslow (A.A. Mitchell 76/148) replace: Stemodia sp. Onslow (A.A.Mitchell 76/148) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4603,18 +3453,6 @@ taxonomic_updates: replace: Stylidium egralliforme MS reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Stylidium sp. Bindoon (K.F. Kenneally 11405) - replace: Stylidium sp. Bindoon (K.F.Kenneally 11405) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Boulder Rock (A.H. Burbidge 2536) - replace: Stylidium sp. Boulder Rock (A.H.Burbidge 2536) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Stylidium sp. Dewars Pool (K.F. Kenneally 11400) - replace: Stylidium sp. Dewars Pool (K.F.Kenneally 11400) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Stylidium sp. Kalbarri (A. Carr 145) replace: Stylidium sp. Kalbarri (A.Carr 145) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4627,10 +3465,6 @@ taxonomic_updates: replace: Swainsona sp. Hamersley Station (A.A.Mitchell 196) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Swainsona sp. Shark Bay (M.E. Trudgen 7588) - replace: Swainsona sp. Shark Bay (M.E.Trudgen 7588) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Synaphea sp. Fairbridge Farm (D. Papenfus 696) replace: Synaphea sp. Fairbridge Farm (D.Papenfus 696) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4639,30 +3473,18 @@ taxonomic_updates: replace: Synaphea sp. Jilakin Flat Rocks Rd (R.Butcher et al. RB200) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Synaphea sp. Kwornicup (D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup(D. Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) +- find: Synaphea sp. Pinjarra Plain (A.S. George 17182) + replace: Synaphea sp. Pinjarra Plain (A.S. George 17182) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species - find: Synaphea sp. Pinjarra (R. Davis 6578) replace: Synaphea sp. Pinjarra (R.Davis 6578) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Synaphea sp. Pinjarra Plain (A.S. George 17182) - replace: Synaphea sp. Pinjarra Plain (A.S. George 17182) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Synaphea sp. Redgate Road (J. Scott 16) replace: Synaphea sp. Redgate Road (J.Scott 16) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Synaphea sp. Woodanilling (G.J. Keighery & N. Gibson 4614) - replace: Synaphea sp. Woodanilling (G.J. Keighery & N. Gibson 4614) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Tecticornia mellaria replace: Tecticornia mellarium reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4675,11 +3497,6 @@ taxonomic_updates: replace: Tecticornia sp. Roy Hill (H.Pringle 62) reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) taxonomic_resolution: species -- find: Tephrosia rosea var. Napier Range - replace: Tephrosia rosea var. Napier Range (C.R.Dunlop 7760 & B.K.Simon) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety - find: Tephrosia rosea var. glabrior replace: Tephrosia rosea var. glabrior MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4700,30 +3517,14 @@ taxonomic_updates: replace: Tephrosia sp. C Kimberley Flora (K.F.Kenneally 5599) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Carnarvon (J.H. Ross 2681) - replace: Tephrosia sp. Carnarvon (J.H.Ross 2681) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tephrosia sp. Cathedral Gorge (F.H. Mollemans 2420) replace: Tephrosia sp. Cathedral Gorge (F.H.Mollemans 2420) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Central (P.K. Latz 17037) - replace: Tephrosia sp. Central (P.K.Latz 17037) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tephrosia sp. D Kimberley Flora (R.D. Royce 1848) replace: Tephrosia sp. D Kimberley Flora (R.D.Royce 1848) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Dunes (J.R. Maconochie 938) - replace: Tephrosia sp. Dunes (J.R.Maconochie 938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Durack River (C.A. Gardner 9938) - replace: Tephrosia sp. Durack River (C.A.Gardner 9938) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tephrosia sp. E Kimberley Flora (C.A. Gardner 9937) replace: Tephrosia sp. E Kimberley Flora (C.A.Gardner 9937) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4736,70 +3537,10 @@ taxonomic_updates: replace: Tephrosia sp. G Kimberley Flora (G.J.Keighery 4828) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tephrosia sp. Kennedy Range (J.S. Beard 4392) - replace: Tephrosia sp. Kennedy Range (J.S.Beard 4392) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Kununurra (T. Handasyde TH00 250) - replace: Tephrosia sp. Kununurra (T.Handesyde TH00 250) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Magazine Hill (P. Jones 365) - replace: Tephrosia sp. Magazine Hill (P.Jones 365) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Mistake Creek (A.C. Beauglehole 54424) - replace: Tephrosia sp. Mistake Creek (A.C.Beauglehole 54424) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. NW Eremaean (S. van Leeuwen et al. PBS 0356) - replace: Tephrosia sp. NW Eremaean (S.van Leeuwen et al. PBS 0356) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Newman (A.A. Mitchell PRP 29) - replace: Tephrosia sp. Newman (A.A.Mitchell PRP 29) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Northern (K.F. Kenneally 11950) - replace: Tephrosia sp. Northern (K.F.Kenneally 11950) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Onslow (K.R. Newbey 10571) - replace: Tephrosia sp. Onslow (K.R.Newbey 10571) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Pentecost River (I.D. Cowie 4168) - replace: Tephrosia sp. Pentecost River (I.D.Cowie 4168) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Saw Ranges (D. Kabay s.n. PERTH 06720544) - replace: Tephrosia sp. Saw Ranges (D.Kabay s.n. PERTH 06720544) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. Willowra (G.M. Chippendale 4809) - replace: Tephrosia sp. Willowra (G.M.Chippendale 4809) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. clay soils (S. van Leeuwen et al. PBS 0273) - replace: Tephrosia sp. Clay soils (S.van Leeuwen et al. PBS 0273) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. deserts (J.R. Maconochie 1403) - replace: Tephrosia sp. deserts (J.R.Maconochie 1403) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tephrosia sp. sparse pinnae (C.R. Michel 2202) - replace: Tephrosia sp. Sparse pinnae (C.R.Michell 2202) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tetratheca sp. Granite (S. Patrick SP1224) replace: Tetratheca sp. Granite (S.Patrick SP1224) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tetratheca sp. Kent River (B.G. Hammersley 1791) - replace: Tetratheca sp. Kent River (B.G.Hammersley 1791) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tetratheca sp. Mt Solus (F. Obbens 307/98) replace: Tetratheca sp. Mt Solus (F.Obbens 307/98) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4854,10 +3595,6 @@ taxonomic_updates: replace: Thomasia purpurea x Thomasia solanacea reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Thomasia sp. Arthur River (H.F. & M. Broadbent 1409) - replace: Thomasia sp. Arthur River (H.F. & M.Broadbent 1409) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thomasia sp. Big Brook (M. Koch 2373) replace: Thomasia sp. Big Brook (M.Koch 2373) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4866,34 +3603,10 @@ taxonomic_updates: replace: Thomasia sp. Gingin (F. & J.Hort 1511) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Thomasia sp. Green Hill (S. Paust 1322) - replace: Thomasia sp. Green Hill (S.Paust 1322) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Lesueur (M. Hislop 4217) - replace: Thomasia sp. Lesueur (M.Hislop 4217) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Merredin (M.B. Mills 11) - replace: Thomasia sp. Merredin (M.B.Mills 11) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia sp. Salmon Gums (C.A. Gardner s.n. PERTH 02708639) - replace: Thomasia sp. Salmon Gums (C.A.Gardner s.n. PERTH 02708639) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thomasia sp. Toolbrunup (G.J. Keighery 9895) replace: Thomasia sp. Toolbrunup (G.J.Keighery 9895) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Thomasia sp. Vasse (C. Wilkins & K. Shepherd CW 581) - replace: Thomasia sp. Vasse (C.Wilkins & K.Shepherd CW581) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Thomasia xformosa - replace: Thomasia x formosa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thryptomene glaucosa replace: Thryptomene glaucosa MS reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) @@ -4935,18 +3648,10 @@ taxonomic_updates: replace: Thryptomene sp. Moresby Range (A.S.George 14873) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Thryptomene sp. Steep Point (M.E. Trudgen 7421) - replace: Thryptomene sp. Steep Point (M.E.Trudgen 7421) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thryptomene sp. Tamala (M.E. Trudgen 7384) replace: Thryptomene sp. Tamala (M.E.Trudgen 7384) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Thryptomene sp. Yuna Reserve (A.C. Burns 100) - replace: Thryptomene sp. Yuna Reserve (A.C.Burns 100) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Thysanotus sp. Badgingarra (E.A. Griffin 2511) replace: Thysanotus sp. Badgingarra (E.A.Griffin 2511) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -4980,14 +3685,6 @@ taxonomic_updates: replace: Tribonanthes sp. Lake Muir (G.J.Keighery & N.Gibson 2134) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tribulopis sp. Koolan Island (K.F. Kenneally 8278) - replace: Tribulopis sp. Koolan Island (K.F.Kenneally 8728) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Tribulopis sp. Mitchell Plateau (K.F. Kenneally 7935) - replace: Tribulopis sp. Mitchell Plateau (K.F.Kenneally 7935) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Tribulus sp. long-styled eichlerianus (A.S. George 10666) replace: Tribulus sp. long-styled eichlerianus (A.S.George 10666) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -5012,8 +3709,6 @@ taxonomic_updates: replace: Tricoryne sp. Geraldton (G.J.Keighery 10461) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Tricoryne sp. Great Victoria Desert western dunes (C. Slee 645-211) - replace: Tricoryne sp. Great Victoria Desert western dunes (C. Slee 645-211) - find: Tricoryne sp. Kimberley (K.F. Kenneally 4857) replace: Tricoryne sp. Kimberley (K.F.Kenneally 4857) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -5050,14 +3745,6 @@ taxonomic_updates: replace: Triodia sp. Mt Ella (M.E.Trudgen 12739) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Triumfetta sp. Adolphus Island (K.F. Kenneally 11898) - replace: Triumfetta sp. Adolphus Island (KF.Kenneally 11898) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Triumfetta sp. Mt Bomford (M.D. Barrett MDB 1001) - replace: Triumfetta sp. Mt Bomford (M.D.Barrett MDB 1001) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Typhonium sp. Kununurra (A.N. Start ANS 1467) replace: Typhonium sp. Kununurra (A.N.Start ANS 1467) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -5070,16 +3757,6 @@ taxonomic_updates: replace: Urodon sp. Narkal (B.H.Smith 1440) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Verticordia plumosa var. ananeotes x vassensis - replace: Verticordia plumosa - reason: Manual match to species, ignoring infraspecific information (Elizabeth Wenk, - 2022-11-22) - taxonomic_resolution: species -- find: Verticordia serrata var. Udumung - replace: Verticordia serrata var. Udumung (D.Hunter & B.Yarran 941006) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-21) - taxonomic_resolution: variety - find: Verticordia staminosa subsp. cylindracea var. cylindracea replace: Verticordia staminosa subsp. cylindracea reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted @@ -5090,18 +3767,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Verticordia xeurardyensis - replace: Verticordia x eurardyensis - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Vigna sp. Hamersley Clay (A.A. Mitchell PRP 113) - replace: Vigna sp. Hamersley Clay (A.A.Mitchell PRP 113) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Vigna sp. northern pubescent (A.A. Mitchell 3667) - replace: Vigna sp. northern pubescent (A.A.Mitchell 3667) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species - find: Vittadinia sp. A Kimberley Flora (R.J. Cranfield 6527) replace: Vittadinia sp. A Kimberley Flora (R.J.Cranfield 6527) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) @@ -5130,23 +3795,12 @@ taxonomic_updates: replace: Xyris atroviridis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) taxonomic_resolution: species -- find: Zornia sp. West Kimberley (C.A. Gardner 9942) - replace: Zornia sp. West Kimberley (C.A.Gardner 9942) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: xCyanthera glossodioides - replace: x Cyanthera glossodioides - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species exclude_observations: - variable: taxon_name find: Ecklonia radiata, Asparagopsis taxiformis, Caulerpa distichophylla, Caulerpa scalpelliformis, Codium duthieae reason: kelp or other algae - variable: taxon_name - find: Platanus x hispanica 'Acerifolia' - reason: omit cultivars -- variable: taxon_name - find: Ruschia macowanii, Syringa vulgaris + find: Ruschia macowanii reason: omit non-native, non-naturalised taxa questions: .na diff --git a/data/Wenk_2022/metadata.yml b/data/Wenk_2022/metadata.yml index ae8388d80..4f7cf3551 100644 --- a/data/Wenk_2022/metadata.yml +++ b/data/Wenk_2022/metadata.yml @@ -20,13 +20,13 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: no - custom_R_code: ' + custom_R_code: ' data %>% filter(str_detect(taxon_name, " ")) %>% filter(source_details == "APC_accepted") %>% mutate( plant_growth_form_to_use = stringr::str_replace( - plant_growth_form_to_use, "monocot_shrub", "basal_large"), + plant_growth_form_to_use, "monocot_shrub", "basal_large"), plant_growth_form_to_use = stringr::str_replace( plant_growth_form_to_use, "monocot_large_basal", "basal_large"), woodiness_to_use = stringr::str_replace( @@ -34,7 +34,7 @@ dataset: woodiness_to_use = stringr::str_replace( woodiness_to_use, "woody_stemmed_monocot", "woody_like_stem") ) - ' + ' collection_date: unknown/2022 taxon_name: taxon_name description: A curated collection of plant growth form values that includes nearly @@ -202,173 +202,15 @@ substitutions: find: fern_tree replace: fern palmoid taxonomic_updates: -- find: Abutilon dioicum - replace: Abutilon dioicum MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Acacia acinacea 'AC01' - replace: Acacia acinacea - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species -- find: Acacia cognata 'BW 06' - replace: Acacia cognata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Acacia fimbriata 'AF001' - replace: Acacia fimbriata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Acacia leprosa 'RBGM 801' - replace: Acacia leprosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Acacia pravissima 'NE 02' - replace: Acacia pravissima - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Acacia saligna subsp. saligna - replace: Acacia saligna - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Acacia sp. Carson River (M.McDonald MM1890) - replace: Acacia sp. Carson River (M.McDonald MM1890) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Acacia sp. China Wall - replace: Acacia sp. China Wall (K.G.Brennan 11901) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Acacia sp. Lake Woods - replace: Acacia sp. Lake Woods - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Acacia sp. Sugarloaf (A.Moscal 8301) Tasmanian Herbarium replace: Acacia sp. Sugarloaf (A.Moscal 8301) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Acacia sp. Wongawol (I. Kealley IEK 015) - replace: Acacia sp. Wongawol (I. Kealley IEK 015) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Acacia spathulifolia 'FlatspathGL' - replace: Acacia spathulifolia - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Adenanthos barbiger subsp. barbiger - replace: Adenanthos barbiger - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Adenanthos sericeus 'AdenpurpGL' - replace: Adenanthos sericeus - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Adenanthos sp. Whicher Range (G.J. Keighery 9736) - replace: Adenanthos sp. Whicher Range (G.J. Keighery 9736) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Alyogyne huegelii var. huegelii - replace: Alyogyne huegelii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Alyogyne purpurea - replace: Alyogyne purpurea MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Amelanchier leavis replace: Amelanchier laevis reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Anemone x hybrida - replace: Anemone x [Anemone x hybrida] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Anigozanthos humilis subsp. Badgingarra - replace: Anigozanthos humilis subsp. Badgingarra (S.D.Hopper 7114) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Anigozanthos viridis subsp. Cataby - replace: Anigozanthos viridis subsp. Cataby (S.D.Hopper 1786) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Apium prostratum subsp. prostratum var. filiforme - replace: Apium prostratum subsp. prostratum - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Apium prostratum subsp. prostratum var. prostratum - replace: Apium prostratum subsp. prostratum - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Arisarum vulgare subsp. vulgare - replace: Arisarum vulgare - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Aristida ramosa x vagans - replace: Aristida ramosa x Aristida vagans - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Arthropteris beckleri x tenella - replace: Arthropteris x [Arthropteris beckleri x tenella] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Astartea sp. big bracteoles (A. R.Annels 995) - replace: Astartea sp. big bracteoles (A.R.Annels 995) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Astrebla lappacea '104C' - replace: Astrebla lappacea - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species -- find: Astrebla pectinata '64A' - replace: Astrebla pectinata - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species -- find: Atriplex sp. B sensu Jacobs (1990) - replace: Atriplex sp. B - reason: match_19. Automatic alignment with species-level canonical name in APNI - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Austrodolichos errabundus var. errabundus - replace: Austrodolichos errabundus - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Baeckea crispiflora subsp. Corrigin - replace: Baeckea crispiflora subsp. Corrigin (A.S.George 14431) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Baeckea crispiflora subsp. Kulin - replace: Baeckea crispiflora subsp. Kulin (R.Hnatiuk 780026) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Baeckea crispiflora subsp. Ongerup - replace: Baeckea crispiflora subsp. Ongerup (A.Scougall & C.Garawanta E35) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Baeckea sp. Eujinyn (J.Buegge D99) replace: Baeckea sp. Eujinyn (J.Buegge D 99) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) @@ -382,547 +224,58 @@ taxonomic_updates: replace: Baeckea sp. Wialki (G.M.Storr s.n. 4/10/1958) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Banksia integrifolia 'BIT 11' - replace: Banksia integrifolia - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Banksia marginata 'Mt. William Dwarf' - replace: Banksia marginata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Banksia spinulosa 'BC 01' - replace: Banksia spinulosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Baumea preissii subsp. preissii - replace: Baumea preissii - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Brachychiton Wangi (S.E.Pickering 20) replace: Brachychiton sp. Wangi (S.E.Pickering 20) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Brachychiton carruthersii - replace: Brachychiton carruthersii - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Bromus catharticus var. catharticus - replace: Bromus catharticus - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Brunonia sp. Goldfields (K.F.Kenneally 5452) replace: Brunonia australis var. A Kimberley Flora (K.F.Kenneally 5452) reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Caesia sp. Koolanooka Hills (R. Meissner & Y. Caruso 78) - replace: Caesia sp. Koolanooka Hills (R. Meissner & Y. Caruso 78) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Caesia sp. Wheatbelt (A.J.M. Hopkins 353) - replace: Caesia sp. Wheatbelt (A.J.M. Hopkins 353) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Cajanus sp. Purnululu - replace: Cajanus sp. Purnululu (I.D.Cowie 783) I.D.Cowie - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Caladenia catenata var. warnervalensis - replace: Caladenia catenata - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Caladenia ensigera replace: Caladenia x ensigera reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Caladenia sp. A sensu Harden (1993) - replace: Caladenia sp. A - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species - find: Caladenia sp. Kilcoy Creek (R.Crane 1286) Qld Herbarium replace: Caladenia sp. Kilcoy Creek (R.Crane 1286) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Calectasia grandiflora subsp. grandiflora - replace: Calectasia grandiflora - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Calectasia grandiflora subsp. southern - replace: Calectasia grandiflora subsp. southern (H.Demarz 546) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Callistemon sp. Rainbow Falls (P.I.Forster PIF13786) Qld Herbarium replace: Callistemon sp. Rainbow Falls (P.I.Forster PIF13786) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Calytrix acutifolia subsp. acutifolia - replace: Calytrix acutifolia - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Casuarina glauca 'CAS01' - replace: Casuarina glauca - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Centaurea sp. A sensu Murray (1992) - replace: Centaurea sp. A - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Centrolepis sp. squamose seeds - replace: Centrolepis sp. squamose seeds (P.K.Latz 3581) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Chamelaucium drummondii subsp. drummondii - replace: Chamelaucium drummondii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Chamelaucium forrestii subsp. forrestii - replace: Chamelaucium forrestii MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Chamelaucium pauciflorum subsp. pauciflorum - replace: Chamelaucium pauciflorum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Citrus microcarpa - replace: Citrus x microcarpa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Conostylis seorsiflora subsp. Nyabing - replace: Conostylis seorsiflora subsp. Nyabing (A.Coates s.n. 2/10/1998) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Cordyline fruticosa 'BRA01' - replace: Cordyline fruticosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Correa alba 'CR001' - replace: Correa alba - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Correa pulchella 'Wreck of the Ethyl' - replace: Correa pulchella - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Correa reflexa 'Anglesea' - replace: Correa reflexa - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Correa reflexa 'Portland Frost and Lime' - replace: Correa reflexa - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Corybas dowlingii replace: Corybas x dowlingii reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Crotalaria spectabilis subsp. spectabilis - replace: Crotalaria spectabilis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Crowea saligna 'PPCS1' - replace: Crowea saligna - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Cyanicula sp. Esperance (G.Brockman 735) WA Herbarium replace: Cyanicula sp. Esperance (G.Brockman 735) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Cymbopogon caesius - replace: Cymbopogon caesius - reason: A non-native taxon, but widely reported in AusTraits, so maintaining the name (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Dampiera angulata subsp. angulata - replace: Dampiera angulata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Dianella brevicaulis var. nov. (Lake Bolac) - replace: Dianella brevicaulis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Dianella caerulea 'DBB03' - replace: Dianella caerulea - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Dianella caerulea var. serrulata - replace: Dianella caerulea, 'serrulata' variant - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Dianella congesta 'DCT500' - replace: Dianella congesta - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Dianella longifolia 'AU22' - replace: Dianella longifolia - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species -- find: Dianella prunina 'DP303' - replace: Dianella prunina - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Dianella revoluta 'DR5000' - replace: Dianella revoluta - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Dianella tasmanica 'TR20' - replace: Dianella tasmanica - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species - find: Dipodium sp. Sandstone (R.L.Barrett & K.W.Dixon 1642) replace: Dipodium sp. Sandstone (R.L.Barrett & K.W.Dixon RLB 1642) reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Diuris polymorpha - replace: Diuris x polymorpha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Drosera dilatato-petiolaris - replace: Drosera dilatatopetiolaris - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Echium pininana x Echium wildpretii - replace: Echium x [Echium pininana x Echium wildpretii] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Elymus (South Marlborough) - replace: Elymus (South Marlborough) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Epidendrum radicans x secundum hybrid complex - replace: Epidendrum radicans x Epidendrum secundum - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Eragrostis aspera - replace: Eragrostis sp. [Eragrostis aspera] - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus -- find: Eremaea violacea subsp. Dobaderry Swamp - replace: Eremaea violacea subsp. Dobaderry Swamp (M.E.Trudgen 3909) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Eriochilus cucullatus complex - replace: Eriochilus cucullatus - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Eryngium pinnatifidum subsp. pinnatifidum - replace: Eryngium pinnatifidum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Eucalyptus aspersa x Eucalyptus falcata - replace: Eucalyptus x [Eucalyptus aspersa x Eucalyptus falcata] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus binacag - replace: Eucalyptus binacag - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Eucalyptus buprestium x Eucalyptus erectifolia - replace: Eucalyptus x [Eucalyptus buprestium x Eucalyptus erectifolia] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus buprestium x Eucalyptus ligulata - replace: Eucalyptus x [Eucalyptus buprestium x Eucalyptus ligulata] - reason: Manual alignment to genus indicating hybrid taxon (Elizaneth Wenk, 2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus buprestium x Eucalyptus staeri - replace: Eucalyptus x [Eucalyptus buprestium x Eucalyptus staeri] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus cladocalyx 'EUC78' - replace: Eucalyptus cladocalyx [Eucalyptus cladocalyx 'EUC78'] - reason: manual match to canonical name in APC (Elizabeth Wenk, 2022-11-23) - taxonomic_resolution: species -- find: Eucalyptus loxophleba x Eucalyptus wandoo - replace: Eucalyptus x [Eucalyptus loxophleba x Eucalyptus wandoo] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus macrocarpa x Eucalyptus pyriformis - replace: Eucalyptus x [Eucalyptus macrocarpa x Eucalyptus pyriformis] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus marginata x Eucalyptus megacarpa - replace: Eucalyptus x [Eucalyptus marginata x Eucalyptus megacarpa] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus marginata x Eucalyptus pachyloma - replace: Eucalyptus x [Eucalyptus marginata x Eucalyptus pachyloma] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus melliodora 'Rosea' - replace: Eucalyptus melliodora - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Eucalyptus oldfieldii subsp. oldfieldii replace: Eucalyptus oldfieldii reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Eucalyptus preissiana x Eucalyptus staeri - replace: Eucalyptus x [Eucalyptus preissiana x Eucalyptus staeri] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-22) - taxonomic_resolution: genus -- find: Eucalyptus robusta 'The Green and Gold' - replace: Eucalyptus robusta - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Eucalyptus sp. Eyre (K.Hill & L.A.S Johnson KH 2170) - replace: Eucalyptus sp. Eyre (K.Hill & L.A.S. Johnson KH 2170) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Eucalyptus sp. F Kimberley Flora - replace: Eucalyptus sp. F - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Eucalyptus tasmaniensis - replace: Eucalyptus tasmaniensis - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Eucalyptus trichopoda - replace: Eucalyptus trichopoda - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Eucalyptus vegrandis subsp. Fine leaf - replace: Eucalyptus vegrandis subsp. Fine leaf (P.J.White 452) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) taxonomic_resolution: subspecies -- find: Eucalyptus x erectifolia - replace: Eucalyptus erectifolia - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-22) - taxonomic_resolution: species -- find: Eutaxia epacridoides subsp. epacridoides - replace: Eutaxia epacridoides - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Ficus obliqua 'FFV1' - replace: Ficus obliqua - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Freesia alba x leichtlinii - replace: Freesia alba x Freesia leichtlinii - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Gastrolobium asperum - replace: Gastrolobium asperum MS - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Gastrolobium sp. crenulatum capitate (E. & S. Pignatti 1588) - replace: Gastrolobium crenulatum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Geleznowia verrucosa subsp. verrucosa - replace: Geleznowia verrucosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Genoplesium cuspidatum - replace: Genoplesium sp. Cuspidata (L.M.Copeland 3858) - reason: match_15_fuzzy. Fuzzy match alignment with species-level canonical name - in `APC known` when everything except first 2 words ignored (2022-11-22) - taxonomic_resolution: species -- find: Glycine pacifica - replace: Glycine pacifica (Grace 946) - reason: match_19. Automatic alignment with species-level canonical name in APNI - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Gompholobium gairdnerium - replace: Gompholobium gairdnerianum - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Gonocarpus benthamii subsp. Stirling - replace: Gonocarpus benthamii subsp. Stirling (C.J.Robinson 1080) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Gonocarpus benthamii subsp. benthamii - replace: Gonocarpus benthamii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Goodenia sp. East Pilbara (A.A. Mitchell PRP 727) O'Meara's Goodenia - replace: Goodenia sp. East Pilbara (A.R.Mitchell PRP 727) - reason: match_18. Automatic alignment with infraspecific canonical name in APNI - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Grevillea brachystylis subsp. Busselton - replace: Grevillea brachystylis subsp. Busselton (G.J.Keighery s.n. 28/8/1985) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Grevillea juniperina 'H22' - replace: Grevillea juniperina - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species -- find: Grevillea robusta 'VIC 97-11' - replace: Grevillea robusta - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Grevillea rosmarinifolia 'RP 03' - replace: Grevillea rosmarinifolia - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Grevillea sp. Duranillin (E.F. Shedley 180) - replace: Grevillea sp. Duranillin (E.F. Shedley 180) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Grevillea sp. Harrismith (G.J. Keighery & N. Gibson 7094) - replace: Grevillea sp. Harrismith (G.J. Keighery & N. Gibson 7094) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Grevillea sp. Trayning (W. Johnston WJ 071) - replace: Grevillea sp. Trayning (W. Johnston WJ 071) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Grevillea stenomera 'LowstenoGL' - replace: Grevillea stenomera - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Grevillea synapheae subsp. A Flora of Australia - replace: Grevillea synapheae subsp. A Flora of Australia (S.D.Hopper 6333) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Grevillea uncinulata subsp. Coomallo - replace: Grevillea uncinulata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Gynochthodes sp. iron range b.hyland 11587 - replace: Gynochthodes sp. iron range b.hyland 11587 - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Hakea laurina 'PVHL1' - replace: Hakea laurina - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Hakea salicifolia 'HAL01' - replace: Hakea salicifolia - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Hakea sp. Eastern coastal plain (G.J. Keighery 8014) - replace: Hakea sp. Eastern coastal plain (G.J. Keighery 8014) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Hakea sp. Hay River (Randino 14) replace: Hakea sp. Hay River (Raudino 14) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Halgania cyanea var. Allambi Stn - replace: Halgania cyanea var. Allambi Stn (B.W.Strong 676) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: variety -- find: Halgania cyanea var. Charleville - replace: Halgania cyanea var. (Charleville R.W.Purdie+ 111) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: variety -- find: Halgania gustafsenii var. Mid West - replace: Halgania gustafsenii var. Mid West (G.Perry 370) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: variety -- find: Halgania gustafsenii var. gustafsenii - replace: Halgania gustafsenii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Halgania solanacea var. Mt Doreen - replace: Halgania solanacea var. Mt Doreen (G.M.Chippendale 4206) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: variety -- find: Halgania solanacea var. solanacea - replace: Halgania solanacea - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Hemiandra glabra subsp. glabra - replace: Hemiandra glabra - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Hemigenia sp. Three Springs (S.Patrick 4043A) replace: Hemigenia sp. Three Springs (S.Patrick 4043 A) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Hybanthus floribundus subsp. Hill River - replace: Hybanthus floribundus subsp. Hill River (E.M.Bennett 2252) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies - find: Hydrocotyle sp. Hamelinensis (G.J.Keighery s.n. (PERTH 02391325)) replace: Hydrocotyle sp. Hamelinensis (G.J.Keighery s.n. PERTH 02391325) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Hymenophyllum (Mt. Burnett) - replace: Hymenophyllum (Mt. Burnett) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Hymenosporum flavum 'VIC 97-12' - replace: Hymenosporum flavum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Hypocalymma angustifolium subsp. Dandaragan Plateau (S.Patrick 702A) replace: Hypocalymma angustifolium subsp. Dandaragan Plateau (S.Patrick 702 A) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) @@ -936,63 +289,6 @@ taxonomic_updates: replace: Hypocalymma sp. Cascade (R.Bruhn 20896 CAS) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Hypoxis hygrometrica var. hypoglaucum - replace: Hypoxis hygrometrica - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Indigofera gilesii subsp. gilesii - replace: Indigofera sp. Gilesii (M.E.Trudgen 15869) - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Ipomoea sp. merluna b.hyland 21374v - replace: Ipomoea sp. merluna b.hyland 21374v - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Isopogon anemonifolius 'Woorikee 2000' - replace: Isopogon anemonifolius - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Isotoma hypocrateriformis var. hypocrateriformis - replace: Isotoma hypocrateriformis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Isotoma hypocrateriformis var. trichogramma - replace: Isotoma hypocrateriformis var. trichogamma MS - reason: match_10_fuzzy. Imprecise fuzzy alignment with known canonical name in APC - (2022-11-22) - taxonomic_resolution: variety -- find: Lasiopetalum cordifolium subsp. cordifolium - replace: Lasiopetalum cordifolium - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Lasiopetalum molle subsp. molle - replace: Lasiopetalum molle - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Lasiopetalum oldfieldii subsp. oldfieldii - replace: Lasiopetalum oldfieldii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Lasiopetalum sp. Badgingarra (E.A.Griffiths 5278) - replace: Lasiopetalum sp. Badgingarra (E.A.Griffin 5278) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Lasiopetalum sp. Watheroo (K.Shepherd & C.Wilkins KS220) - replace: Lasiopetalum erectifolium - reason: match_16_fuzzy. Fuzzy alignment with canonical name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Leontodon saxatilis subsp. saxatilis - replace: Leontodon saxatilis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Leucopogon sp. Bolgart (M.Hislop & F.Hort MH2486) replace: Leucopogon sp. Bolgart (M.Hislop & F.Hort MH 2486) reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation @@ -1011,510 +307,66 @@ taxonomic_updates: replace: Leucopogon sp. Southern Granite (E.D.Middleton EDM 266) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Leucopogon sulcatus - replace: Leucopogon striatus - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Lolium multiflorum x perenne - replace: Lolium multiflorum x Lolium perenne - reason: Manual alignment with canonical species name in APNI (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Lolium perenne x rigidum - replace: Lolium perenne subsp. rigidum - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-22) - taxonomic_resolution: subspecies -- find: Lomandra confertifolia 'SIR 5' - replace: Lomandra confertifolia subsp. similis - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: subspecies -- find: Lomandra filiformis 'LMF500' - replace: Lomandra filiformis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Lomandra fluviatilis 'ABU7' - replace: Lomandra fluviatilis - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species -- find: Lomandra hystrix 'WN002' - replace: Lomandra hystrix - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Lomandra longifolia 'LM400' - replace: Lomandra longifolia - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Lomandra montana 'LLM500' - replace: Lomandra montana - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Lomandra multiflora 'VER1' - replace: Lomandra multiflora - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Meeboldina decipiens subsp. decipiens - replace: Meeboldina decipiens MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Melaleuca incana subsp. Gingilup - replace: Melaleuca incana subsp. Gingilup (N.Gibson & M.Lyons 593) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Melia azedarach 'Telopea Valley Mini-Cedar' - replace: Melia azedarach - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Miconia nervosa - replace: Miconia nervosa - reason: Non-native taxon reported as a serious weed in Queensland, but not in APC - taxonomic_resolution: species -- find: Microcybe pauciflora subsp. Grass Patch - replace: Microcybe pauciflora - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Microcybe sp. Windy Hill (G.F. Craig 6583) - replace: Microcybe sp. Windy Hill (G.F. Craig 6583) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Microlaena stipoides '703.6.12' - replace: Microlaena stipoides - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Micromyrtus racemosa var. north-west - replace: Micromyrtus racemosa var. north-west (R.J.Cranfield 2891) - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: variety -- find: Micromyrtus triptycha subsp. triptycha - replace: Micromyrtus triptycha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Mirbelia sp. Bursarioides (T..Lally 760) replace: Mirbelia sp. Bursarioides (T.R.Lally 760) reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Mirbelia ternata - replace: Mirbelia sp. Ternata (M.D.Crisp & L.G.Cook MDC 9267) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Monotoca oligarrhenoides subsp. Gibson - replace: Monotoca oligarrhenoides subsp. Gibson (R.D.Royce 3573) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Muehlenbeckia diclina subsp. diclina - replace: Muehlenbeckia diclina - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Murraya paniculata 'Style-it-XS' - replace: Murraya paniculata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Myosotis laxa subsp. caespitosa - replace: Myosotis laxa subsp. cespitosa - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: subspecies -- find: Nephrolepis obliterata 'Kimberley Queen Curly Top' - replace: Nephrolepis obliterata - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Olearia dampieri subsp. dampieri - replace: Olearia dampieri MS - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Opuntia macrorhiza subsp. pottsii - replace: Opuntia macrorhiza subsp. pottsii - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea - replace: Opuntia polyacantha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Opuntia polyacantha var. erinacea (Engelm. & J.M.Bigelow) B.D.Parfitt - replace: Opuntia polyacantha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Opuntia sp. sensu I.Telford (1984) - replace: Opuntia sp. sensu I.Telford (1984) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Owenia sp. Top End - replace: Owenia sp. Top End (I.D.Cowie 14038 & N.J.Cuff) - reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Patersonia drummondii subsp. Northern - replace: Patersonia drummondii subsp. Northern (R.D.Royce UWA 777) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Patersonia drummondii subsp. drummondii - replace: Patersonia drummondii - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Pelargonium littorale subsp. littorale - replace: Pelargonium littorale - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Petrophile chrysantha subsp. Watheroo - replace: Petrophile chrysantha subsp. Watheroo (K.M.Allan 57) - reason: match_12. Automatic alignment with infraspecific canonical name in APC known - names when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Petrophile squamata subsp. Ravensthorpe - replace: Petrophile squamata subsp. Ravensthorpe (E.M.Bennett 2597) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Philotheca nodiflora subsp. lateriticola - replace: Philotheca nodiflora subsp. latericola - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) - taxonomic_resolution: subspecies -- find: Philotheca verrucosa 'J. Semmens' - replace: Philotheca verrucosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Pimelea ferruginea 'WhiteferruGL' - replace: Pimelea ferruginea - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species - find: Pimelea neo-anglica replace: Pimelea neoanglica reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Pimelea physodes 'QualredGL' - replace: Pimelea physodes - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Poa poiformis 'PP500' - replace: Poa poiformis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Pomaderris x viridis - replace: Pomaderris viridis - reason: match_06. Automatic alignment with synonymous term among accepted canonical - names in APC (2022-11-22) - taxonomic_resolution: species -- find: Prasophyllum sp. A sensu Harden (1993) - replace: Prasophyllum sp. A - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Ranunculus aquatilis var. diffusus - replace: Ranunculus aquatilis - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Rhagodia baccata 'RhagsilGL' - replace: Rhagodia baccata - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Rhagodia spinescens 'SAB01' - replace: Rhagodia spinescens - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Rotheca myricoides subsp. myricoides - replace: Rotheca myricoides - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Salix x sepulcralis var. chrysocoma - replace: Salix x sepulcralis nothovar. chrysocoma - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: variety -- find: Salix x sepulcralis var. sepulcralis - replace: Salix x sepulcralis nothovar. sepulcralis - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: variety -- find: Salvia africana-lutea - replace: Salvia africana lutea - reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-22) - taxonomic_resolution: species -- find: Scaevola aemula 'PP 031' - replace: Scaevola aemula - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Scaevola humilis 'PFS100' - replace: Scaevola humilis - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Scaevola nitida 'ScawGL' - replace: Scaevola nitida - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Scaevola phlebopetala 'No.33' - replace: Scaevola phlebopetala - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Schoenus subflavus subsp. hispid culms - replace: Schoenus subflavus subsp. hispid culms (K.R.Newbey 8278) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Schoenus subflavus subsp. long leaves - replace: Schoenus subflavus subsp. long leaves (K.L.Wilson 2865) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Schoenus subflavus subsp. subflavus - replace: Schoenus subflavus - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) +- find: Platanus x hispanica 'Acerifolia' + replace: 'Platanus x hispanica ‘Acerifolia’' + reason: Manual alignment with APC-syntax (E. Wenk, 2023-11-19) taxonomic_resolution: species - find: Scholtzia sp. Jurien (R.J.Cranfield & P.Spencer RJC 8443) replace: Scholtzia sp. Jurien (R.J.Cranfield & P.J.Spencer RJC 8443) reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Sclerolaena diacantha var. deminuta - replace: Sclerolaena diacantha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Sclerolaena sp. Koolanooka Hills (R. Meissner & Y. Caruso 437) - replace: Sclerolaena sp. Koolanooka Hills (R. Meissner & Y. Caruso 437) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Sclerolaena sp. saline soils - replace: Sclerolaena sp. saline soils (D.E.Albrecht 6723) - reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Sebaea zeyheri subsp. cleistantha - replace: Sebaea zeyheri - reason: match_19. Automatic alignment with species-level canonical name in APNI - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Senecio linearifolius var. glaucus ms. - replace: Senecio linearifolius - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Sida sp. B sensu Harden (1990) - replace: Sida sp. B - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Sida sp. C sensu Harden (1990) - replace: Sida sp. C - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Sida sp. Pilbara (S. van Leeuwen 4377) - replace: Sida sp. Pilbara (S. van Leeuwen 4377) +- find: Sida sp. Supplejack Station (T.S.Henshall 2345) + replace: Sida sp. Supplejack Station (T.S.Henshall 2345) reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) taxonomic_resolution: species - find: Sida sp. Walhallow Station (C.Edgood 28/Oct/94) replace: Sida A90358 Walhallow Station reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) taxonomic_resolution: species -- find: Sida sp. sand dunes (A.A.Mitchell PRP1208) - replace: Sida sp. sand dunes (A.A.Mitchell PRP1208) - reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-22) - taxonomic_resolution: species -- find: Sida sp. Supplejack Station (T.S.Henshall 2345) - replace: Sida sp. Supplejack Station (T.S.Henshall 2345) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-21) - taxonomic_resolution: species -- find: Smilax sp. aff. s. elliptica - replace: Smilax sp. [Smilax sp. aff. s. elliptica] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-22) - taxonomic_resolution: genus - find: Sprengelia sp. Mt Read (R.K.Crowden 0802 006) Tas Herbarium replace: Sprengelia sp. Mt Read (R.K.Crowden 0802 006) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Stackhousia muricata subsp. annual - replace: Stackhousia muricata subsp. Annual (W.R.Barker 2172) - reason: Manual alignment with canonical subspecies name in APC (Elizabeth Wenk, - 2022-11-22) - taxonomic_resolution: subspecies - find: Steinchisma laxa replace: Steinchisma laxum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-22) taxonomic_resolution: species -- find: Synaphea sp. Darkin (F. Hort et al. 586) - replace: Synaphea sp. Darkin (F. Hort et al. 586) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Kwornicup (D.Trenowden 429) - replace: Synaphea sp. Kwornicup (D.Trenowden 429) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Pinjarra Plain (A.S. George 17182) - replace: Synaphea sp. Pinjarra Plain (A.S. George 17182) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Southern Ranges (S. Kern et al. LCH 17378) - replace: Synaphea sp. Southern Ranges (S. Kern et al. LCH 17378) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Udumung (A.S. George 17058) - replace: Synaphea sp. Udumung (A.S. George 17058) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Synaphea sp. Woodanilling (G.J. Keighery & N. Gibson 4614) - replace: Synaphea sp. Woodanilling (G.J. Keighery & N. Gibson 4614) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species - find: Taraxacum Celtica (other taxa) Fl. Australia 2015 (A.C.Beauglehole 78369) replace: Taraxacum sect. Celtica (other taxa) Fl. Australia 2015 (A.C.Beauglehole 78369) reason: Exact match of the first word of the taxon name to an APC-accepted genus (2023-11-02) taxonomic_resolution: species -- find: Tecticornia sp. (Connewarre) - replace: Tecticornia sp. Connewarre (A.C.Beauglehole 70251) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Telopea speciosissima 'Light Shade of Pale' - replace: Telopea speciosissima - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Tephrosia rosea var. Fortescue creeks - replace: Tephrosia rosea var. Fortescue creeks (M.I.H.Brooker 2186) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: variety -- find: Tephrosia rosea var. Port Hedland - replace: Tephrosia rosea var. Port Hedland (A.S.George 1114) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: variety - find: Tephrosia sp. Sparse pinnae (C.R.Michel 2202) replace: Tephrosia sp. Sparse pinnae (C.R.Michell 2202) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Teucrium fililobum subsp. fililobum - replace: Teucrium fililobum - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Teucrium fililobum subsp. glandular - replace: Teucrium fililobum subsp. glandular (W.Rogerson 233) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Teucrium sp. D sensu Conn (1992) - replace: Teucrium sp. D Flora of New South Wales (S.A.Horton 4114) - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Thelymitra x mackibbinii replace: Thelymitra mackibbinii reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-22) taxonomic_resolution: species -- find: Thomasia purpurea x solanacea - replace: Thomasia purpurea x Thomasia solanacea - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species -- find: Thomasia x [Thomasia purpurea x Thomasia solanacea] - replace: Thomasia x [Thomasia purpurea x Thomasia solanacea] - reason: Exact match to APC genus. Taxon name includes ' x ' indicating a hybrid - taxon and taxon can only be aligned to genus-rank (2023-11-02) - taxonomic_resolution: genus -- find: Thryptomene ninghanensis - replace: Thryptomene sp. Wandana (M.E.Trudgen 22016) - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-22) - taxonomic_resolution: species -- find: Tricoryne sp. Great Victoria Desert western dunes (C. Slee 645-211) - replace: Tricoryne sp. Great Victoria Desert western dunes (C. Slee 645-211) - reason: maintaining phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Typhonium sp. Charles Darwin - replace: Typhonium sp. Charles Darwin (N.J.Cuff 447) - reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Typhonium sp. Cox Peninsula - replace: Typhonium sp. Cox Peninsula (S.Nicholas 15/12/1999) - reason: Maintaining name for phrase name not yet in APC (E. Wenk, 2023-11-03) - taxonomic_resolution: species -- find: Verbena hispida Ruiz & Pav. var. hispida - replace: Verbena hispida - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Verticordia plumosa var. ananeotes x vassensis - replace: Verticordia plumosa - reason: Manual match to species, ignoring infraspecific information (Elizabeth Wenk, - 2022-11-22) - taxonomic_resolution: species -- find: Verticordia staminosa subsp. cylindracea var. cylindracea - replace: Verticordia staminosa subsp. cylindracea - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: Verticordia staminosa subsp. cylindracea var. erecta - replace: Verticordia staminosa subsp. cylindracea - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: subspecies -- find: X Triticosecale - replace: x Triticosecale - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus -- find: Yucca gloriosa var. recurvifolia - replace: Yucca gloriosa - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Zoysia macrantha 'MAC03' - replace: Zoysia macrantha - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-23) - taxonomic_resolution: species -- find: Zoysia matrella 'A-1' - replace: Zoysia matrella - reason: match_10_fuzzy. Imprecise fuzzy alignment with accepted canonical name in - APC (2022-11-23) - taxonomic_resolution: species exclude_observations: - variable: taxon_name - find: Cyrtomium falcatum 'Rochfordii', Dicentra formosa subsp. formosa 'Alba', Dodonaea viscosa 'Purpurea', Echinochloa polystachya 'Amity', Salix matsudana 'Tortuosa', Megathyrsus maximus var. maximus 'Hamil', Hymenachne amplexicaulis 'Olive', Grevillea 'Poorinda Constance', Cordyline 'Uto01', Citrus 'Red Centre LIme', Correa 'C100', Telopea 'T90-1-0-1', Philotheca 'J. Semmens', Acacia 'H.L.White', Dianella 'Proquest D5', Eucalyptus 'EpEm1001', Eriostemon 'J. Semmens', Macadamia 'Hidden Valley A16', Lechenaultia 'Kings Park Hot Lips', Grevillea 'RF05' + find: Cyrtomium falcatum 'Rochfordii', Dicentra formosa subsp. formosa 'Alba', Dodonaea + viscosa 'Purpurea', Echinochloa polystachya 'Amity', Salix matsudana 'Tortuosa', + Megathyrsus maximus var. maximus 'Hamil', Hymenachne amplexicaulis 'Olive', Grevillea + 'Poorinda Constance' reason: excluding cultivars - variable: taxon_name find: Salix x sepulcralis nothovar. chrysocoma, Salix x sepulcralis nothovar. sepulcralis, Salix x fragilis nothovar. furcata, Salix x fragilis nothovar. fragilis reason: excluding nothovarietas - variable: taxon_name - find: Asplenium lobulatum Mett. ex Kuhn, Cerastium pyrenaicum J.Gay, Passiflora miniata, Quercus ilex, Byttneria angulata, - Selenicereus undatus, Silene gracilis DC., Plecostachys serpyllifolia, Taraxacum spathulatum, Roepera sessilifolia, Polygonatum - multiflorum, Haworthia attenuata var. attenuata, Cipadessa baccifera, Hoffmannseggia glauca, Houttuynia cordata, Margyricarpus - pinnatus, Radermachera sinica, x Triticosecale, Euryops virgineus, Fraxinus chinensis, Salvinia adnata, Cryptocarya macrocarpa, - Ipomoea fimbriosepala, Persicaria chinensis, Pteris nipponica, Prosopis mesquite, Rubus praecox, Syringa vulgaris, Ruschia macowanii, Taraxacum campylodes, Selenicereus undatus, Habranthus brachyandrus, Habranthus tubispathus, Ornithogalum orthophyllum + find: Prosopis mesquite reason: excluding non-native, non-naturalised species questions: .na diff --git a/data/Wenk_2023/metadata.yml b/data/Wenk_2023/metadata.yml index a612e1a07..4c5b63f5f 100644 --- a/data/Wenk_2023/metadata.yml +++ b/data/Wenk_2023/metadata.yml @@ -26,7 +26,7 @@ dataset: taxon_name: taxon_name description: A curated collection of life history values that includes nearly all species in the Australian Plant Census (APC). - basis_of_record: literature, field + basis_of_record: literature field life_stage: adult sampling_strategy: This dataset is compiled from a combination of data extracted from state and national online floras, supplemented by the taxonomic literature. @@ -158,6 +158,10 @@ taxonomic_updates: replace: Leucopogon sp. Southern Granite (E.D.Middleton EDM 266) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species +- find: Platanus x hispanica 'Acerifolia' + replace: 'Platanus x hispanica ‘Acerifolia’' + reason: Manual alignment with APC-syntax (E. Wenk, 2023-11-19) + taxonomic_resolution: species - find: Scholtzia sp. Jurien (R.J.Cranfield & P.Spencer RJC 8443) replace: Scholtzia sp. Jurien (R.J.Cranfield & P.J.Spencer RJC 8443) reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation @@ -171,16 +175,6 @@ taxonomic_updates: replace: Sprengelia sp. Mt Read (R.K.Crowden 0802 006) reason: Manual alignment to APC accepted taxon name (E. Wenk, 2023-11-03) taxonomic_resolution: species -- find: Swainsona microcalyx adenophylla - replace: Swainsona microcalyx subsp. adenophylla - reason: Exact match of the first three words of the taxon name to an APC-known canonical - name (2023-11-02) - taxonomic_resolution: subspecies -- find: Swainsona microphylla tomentosa - replace: Swainsona microphylla subsp. tomentosa - reason: Exact match of the first three words of the taxon name to an APC-known canonical - name (2023-11-02) - taxonomic_resolution: subspecies - find: Taraxacum Celtica (other taxa) Fl. Australia 2015 (A.C.Beauglehole 78369) replace: Taraxacum sect. Celtica (other taxa) Fl. Australia 2015 (A.C.Beauglehole 78369) diff --git a/data/Wenk_2023_2/data.csv b/data/Wenk_2023_2/data.csv index b2f80b435..25b7aec8a 100644 --- a/data/Wenk_2023_2/data.csv +++ b/data/Wenk_2023_2/data.csv @@ -11,7 +11,7 @@ Species,Acacia rhodophloia,"flowers sporadically (probably dependent upon incide Species,Acacia robeorum,"grows in sand or loam over granite, laterite or quartz, in spinifex grassland, sometimes along drainage lines. initiation possibly dependent upon the timing and/or intensity of rainfall.",ABRS_2022,,rain,, Species,Acacia sibirica,seemingly flowers and fruits in response to the timing and intensity of rainfall.,ABRS_2022,,rain,, Species,Acacia sphaerostachya,probably related to rainfall events.,ABRS_2022,,rain,, -Species,Acacia stellaticeps,"flowering probably dependent upon the timing and intensity of rainfall events, fide b.maslin et al., wattles of the pilbara (2010).",ABRS_2022,,rain,, +Species,Acacia stellaticeps,"flowering probably dependent upon the timing and intensity of rainfall events, fide b.maslin et al., wattles of the pilbara (2010).",ABRS_2022,,rain,, Species,Acacia thoma,appears to flower in response to summer rainfall events;,ABRS_2022,,rain_summer,, Species,Acacia umbraculiformis,appears to commence flowering in response to summer and early winter rainfall. because of the sporadic occurrence of rainfall within the geographic range of the species it is not expected that all plants will flower simultaneously during this period.,ABRS_2022,sporadic,rain_summer rain_winter,, Species,Acacia xiphophylla,flowers quickly and opportunistically in response to rain.,ABRS_2022,,rain_obligate,, diff --git a/data/Wenk_2023_2/metadata.yml b/data/Wenk_2023_2/metadata.yml index a13654c1e..93f75d247 100644 --- a/data/Wenk_2023_2/metadata.yml +++ b/data/Wenk_2023_2/metadata.yml @@ -139,9 +139,5 @@ taxonomic_updates: reason: Exact match of the first three words of the taxon name to an APC-known canonical name (2023-11-02) taxonomic_resolution: subspecies -- find: x Phelodia tutelata - replace: x Phelodia tutelata - reason: Manual match to APC accepted name (E. Wenk, 2023-05-24) - taxonomic_resolution: species exclude_observations: .na questions: .na diff --git a/data/White_2020/metadata.yml b/data/White_2020/metadata.yml index fc630116d..f667c763e 100644 --- a/data/White_2020/metadata.yml +++ b/data/White_2020/metadata.yml @@ -25,15 +25,15 @@ contributors: dataset_curators: Elizabeth Wenk dataset: data_is_long_format: no - custom_R_code: ' - data %>% + custom_R_code: ' + data %>% subset(NonIndigenous != 1) %>% mutate(flowering_season = paste0(Flower_Jan,Flower_Feb,Flower_Mar,Flower_Apr,Flower_May,Flower_Jun, Flower_Jul,Flower_Aug,Flower_Sep,Flower_Oct,Flower_Nov,Flower_Dec) %>% na_if("000000000000") %>% convert_01_ny) %>% mutate( dispersers = dispersal_syndrome, - fire_exposure_level = + fire_exposure_level = ifelse(fire_response %in% c("fire_not_relevant", "fire_not_relevant fire_killed", "fire_killed fire_not_relevant", "fire_not_relevant resprouts"," fire_not_relevant not_fire_killed_does_not_resprout"), @@ -60,7 +60,7 @@ dataset: group_by(Species_Name) %>% mutate(observation_num = row_number()) %>% ungroup() - ' + ' collection_date: unknown/2020 taxon_name: Species_Name description: Compilation of trait data for Victorian plant species @@ -382,9 +382,6 @@ substitutions: - trait_name: plant_physical_defence_structures find: 1 replace: sharp_pointed_defence -- trait_name: plant_physical_defence_structures - find: 1 - replace: sharp_pointed_defence - trait_name: seedbank_longevity find: '10' replace: --2 @@ -700,11 +697,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Acacia melvillei x Acacia homalophylla - replace: Acacia x [Acacia melvillei x Acacia homalophylla] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Acacia microcarpa s.l. replace: Acacia microcarpa reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -799,10 +791,6 @@ taxonomic_updates: replace: Aciphylla sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Acmena +C9:D16smithii Rheophytic race - replace: Acmena smithii Rheophytic race - reason: manual alignment to canonical name in APNI (Elizabeth Wenk, 2022-11-23) - taxonomic_resolution: species - find: Acmena smithii (Rheophytic race) replace: Acmena smithii Rheophytic race reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-12) @@ -815,11 +803,6 @@ taxonomic_updates: replace: Acmena smithii Type form reason: match_08. Automatic alignment with synonymous name in APNI (2022-11-12) taxonomic_resolution: species -- find: Acmena sp. - replace: Syzygium sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Acmena spp. replace: Syzygium sp. [White_2020] reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level @@ -862,11 +845,6 @@ taxonomic_updates: replace: Adiantum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Adriana quadripartita (glabrous form) - replace: Adriana quadripartita - reason: match_14. Automatic alignment with species-level canonical name in APC accepted - when notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Adriana quadripartita (pubescent form) replace: Adriana quadripartita reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -895,11 +873,6 @@ taxonomic_updates: replace: Aegiceras sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Agrostis aff. hiemalis - replace: Agrostis sp. [Agrostis aff. hiemalis; White_2020] - reason: match_09. Rewording taxon with term `affinis` preceding species epithet - to indicate a genus-level alignment with `APC accepted` genus (2022-11-10) - taxonomic_resolution: genus - find: Agrostis avenacea var. replace: Agrostis avenacea reason: match_06. Automatic alignment with synonymous term among known canonical @@ -994,11 +967,6 @@ taxonomic_updates: replace: Alternanthera sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Althenia sp - replace: Althenia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Alyxia spp. replace: Alyxia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -1040,11 +1008,6 @@ taxonomic_updates: replace: Anacampseros sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Androcalva sp - replace: Androcalva sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Angianthus disarticulata replace: Angianthus sp. [Angianthus disarticulata; White_2020] reason: match_20. Rewording name to be recognised as genus rank, with genus accepted @@ -1347,11 +1310,6 @@ taxonomic_updates: replace: Austrobryonia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Austrocynoglossum sp. - replace: Hackelia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-23) - taxonomic_resolution: genus - find: Austrocynoglossum spp. replace: Austrocynoglossum sp. [White_2020] reason: Exact match of taxon name ending with `sp.` to an APC genus (2023-11-02) @@ -1384,16 +1342,6 @@ taxonomic_updates: reason: match_04. Rewording taxon where `/` indicates uncertain species identification to align with `APC accepted` genus (2022-11-10) taxonomic_resolution: genus -- find: Austrostipa sp - replace: Austrostipa sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus -- find: Austrostipa sp. aff. hemipogon/semibarbata - replace: Austrostipa sp. [Austrostipa sp. aff. hemipogon/semibarbata; White_2020] - reason: match_04. Rewording taxon where `/` indicates uncertain species identification - to align with `APC accepted` genus (2022-11-22) - taxonomic_resolution: genus - find: Austrostipa sp. aff. variabilis replace: Austrostipa sp. [Austrostipa sp. aff. variabilis; White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -1467,12 +1415,6 @@ taxonomic_updates: reason: match_12. Automatic alignment with infraspecific canonical name in APC known names when notes are ignored (2022-11-10) taxonomic_resolution: subspecies -- find: Banksia marginata x Banksia paludosa subsp. subsp. astrolux - replace: Banksia x [Banksia marginata x Banksia paludosa subsp. subsp. astrolux; - White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Banksia marginata x paludosa subsp. subsp. astrolux replace: Banksia x [Banksia marginata x paludosa subsp. subsp. astrolux; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -1521,16 +1463,6 @@ taxonomic_updates: replace: Bertya sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Bertya tasmanica Glabrous ovary variant - replace: Bertya tasmanica var. Glabrous ovary (T.A.James 527 & M.J.Taylor) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: variety -- find: Bertya tasmanica Golden-haired variant - replace: Bertya tasmanica var. Golden hairs (P.C.Jobson 4616 et al.) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: variety - find: Bertya tasmanica subsp. vestita (fine-haired variant) replace: Bertya tasmanica var. Fine hairs (I.Crawford 3165) reason: Manual alignment with canonical name of rank `varietas` in APC (Elizabeth @@ -1598,11 +1530,6 @@ taxonomic_updates: replace: Billardiera sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Blechnum sp - replace: Blechnum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Blechnum spp. replace: Blechnum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -1650,11 +1577,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Bossiaea prostrata x Bossiaea buxifolia - replace: Bossiaea x [Bossiaea prostrata x Bossiaea buxifolia] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Bossiaea spp. replace: Bossiaea sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -2082,11 +2004,6 @@ taxonomic_updates: replace: Calotis sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Calytrix sp - replace: Calytrix sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Calytrix spp. replace: Calytrix sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -2169,11 +2086,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Carex sp - replace: Carex sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Carex spp. replace: Carex sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -2375,11 +2287,6 @@ taxonomic_updates: reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level alignment with `APC known` name (2022-11-10) taxonomic_resolution: genus -- find: Chordifex sp - replace: Chordifex sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Choretrum spp. replace: Choretrum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -2692,11 +2599,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Cryptandra sp. Floriferous (W.R.Barker 4131) W.R.Barker - replace: Cryptandra sp. Floriferous (W.R.Barker 4131) - reason: match_12. Automatic alignment with infraspecific canonical name in APC accepted - when notes are ignored (2022-11-10) - taxonomic_resolution: species - find: Cryptandra sp. Long hypanthium (C.R. Alcock 10626) replace: Cryptandra sp. Long hypanthium (C.R.Alcock 10626) reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) @@ -2854,11 +2756,6 @@ taxonomic_updates: replace: Deeringia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Dendrobium sp - replace: Dendrobium sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Dendrobium spp. replace: Dendrobium sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -3499,16 +3396,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus albens x Eucalyptus moluccana - replace: Eucalyptus x [Eucalyptus albens x Eucalyptus moluccana; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus -- find: Eucalyptus albens x Eucalyptus crebra - replace: Eucalyptus x [Eucalyptus albens x Eucalyptus crebra; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus albens x moluccana replace: Eucalyptus x [Eucalyptus albens x moluccana; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -3539,26 +3426,11 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among known canonical names APC (2022-11-10) taxonomic_resolution: variety -- find: Eucalyptus blakelyi x Eucalyptus chloroclada - replace: Eucalyptus x [Eucalyptus blakelyi x Eucalyptus chloroclada; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus -- find: Eucalyptus blakelyi x Eucalyptus dealbata - replace: Eucalyptus x [Eucalyptus blakelyi x Eucalyptus dealbata; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus botryoides -- saligna replace: Eucalyptus sp. [Eucalyptus botryoides -- saligna; White_2020] reason: match_03. Rewording taxon that are intergrades between two taxa and genus aligns with `APC accepted` genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus botryoides x Eucalyptus saligna - replace: Eucalyptus x [Eucalyptus botryoides x Eucalyptus saligna; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus calycogona subsp. orientis replace: Eucalyptus calycogona reason: match_14. Automatic alignment with species-level canonical name in APC accepted @@ -3574,11 +3446,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Eucalyptus camaldulensis x Eucalyptus chloroclada - replace: Eucalyptus x [Eucalyptus camaldulensis x Eucalyptus chloroclada; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus camaldulensis x E. tereticornis replace: Eucalyptus x [Eucalyptus camaldulensis x E. tereticornis; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -3623,26 +3490,11 @@ taxonomic_updates: reason: match_03. Rewording taxon that are intergrades between two taxa and genus aligns with `APC accepted` genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus microcarpa x Eucalyptus cebra - replace: Eucalyptus x [Eucalyptus microcarpa x Eucalyptus cebra; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus -- find: Eucalyptus microcarpa x Eucalyptus odorata - replace: Eucalyptus x [Eucalyptus microcarpa x Eucalyptus odorata; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus microcarpa x crebra replace: Eucalyptus x [Eucalyptus microcarpa x crebra; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus pauciflora x Eucalyptus radiata - replace: Eucalyptus x [Eucalyptus pauciflora x Eucalyptus radiata; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus pauciflora x radiata replace: Eucalyptus x [Eucalyptus pauciflora x Eucalyptus radiata] reason: Manual alignment to genus indicating hybrid taxon (Elizaneth Wenk, 2022-11-12) @@ -3662,16 +3514,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Eucalyptus racemosa x Eucalyptus haemastoma - replace: Eucalyptus x [Eucalyptus racemosa x Eucalyptus haemastoma; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus -- find: Eucalyptus racemosa x Eucalyptus piperita - replace: Eucalyptus x [Eucalyptus racemosa x Eucalyptus piperita; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Eucalyptus sp. aff. aromaphloia replace: Eucalyptus sp. [Eucalyptus sp. aff. aromaphloia; White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -3760,11 +3602,6 @@ taxonomic_updates: replace: Eulalia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Euphorbia sp - replace: Euphorbia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Euphrasia sp. aff. caudata replace: Euphrasia sp. [Euphrasia sp. aff. caudata; White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -4152,10 +3989,6 @@ taxonomic_updates: reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Grevillea linearifolia f. 'Kanangra/Braidwood form' - replace: Grevillea linearifolia f. Kanangra/Braidwood form - reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-22) - taxonomic_resolution: species - find: Grevillea linearifolia x parviflora replace: Grevillea x [Grevillea linearifolia x parviflora; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -4403,11 +4236,6 @@ taxonomic_updates: replace: Hookerochloa sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Hornungia sp - replace: Hornungia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Hornungia spp. replace: Hornungia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -4551,11 +4379,6 @@ taxonomic_updates: replace: Isopogon sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Isotoma sp - replace: Isotoma sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Isotoma spp. replace: Isotoma sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -4716,11 +4539,6 @@ taxonomic_updates: reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level alignment with `APC known` name (2022-11-10) taxonomic_resolution: genus -- find: Lagenophora sp - replace: Lagenophora sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Lagenophora spp. replace: Lagenophora sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -4952,11 +4770,6 @@ taxonomic_updates: replace: Lilaeopsis sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Liliaceae spp. - replace: Liliaceae sp. [White_2020] - reason: match_02. Rewording taxon with ending with `sp.` to indicate a family-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: family - find: Liliaceae spp. (sensu lato) replace: Liliaceae sp. [Liliaceae sp. (sensu lato); White_2020] reason: match_21. Rewording name to be recognised as family rank, with family accepted @@ -5007,11 +4820,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: Lobelia sp - replace: Lobelia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Lobelia sp. aff. pedunculata (South-west Victoria) replace: Lobelia sp. [Lobelia sp. aff. pedunculata (South-west Victoria); White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -5064,11 +4872,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Lomatia myricoides x Lomatia silaifolia - replace: Lomatia x [Lomatia myricoides x Lomatia silaifolia; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Lomatia spp. replace: Lomatia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -5152,11 +4955,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-10) taxonomic_resolution: subspecies -- find: Malva sp - replace: Malva sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Malvaceae spp. replace: Malvaceae sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -5207,16 +5005,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level name known by APC when notes are ignored (2022-11-22) taxonomic_resolution: species -- find: Melicytus dentatus (broad-leaf variant) - replace: Melicytus dentatus - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species -- find: Melicytus dentatus (narrow-leaf variant) - replace: Melicytus dentatus - reason: match_14. Automatic alignment with species-level name known by APC when - notes are ignored (2022-11-22) - taxonomic_resolution: species - find: Melicytus dentatus s.s. (broad-leaf variant) replace: Melicytus dentatus reason: Exact match of the first two words of the taxon name to an APC-accepted @@ -5227,11 +5015,6 @@ taxonomic_updates: reason: Exact match of the first two words of the taxon name to an APC-accepted canonical name (2023-11-02) taxonomic_resolution: species -- find: Melicytus sp - replace: Melicytus sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Melicytus sp. aff. dentatus replace: Melicytus sp. [Melicytus sp. aff. dentatus; White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -5282,11 +5065,6 @@ taxonomic_updates: reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level alignment with `APC known` name (2022-11-10) taxonomic_resolution: genus -- find: Microtis sp - replace: Microtis sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Microtis spp. replace: Microtis sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -5339,11 +5117,6 @@ taxonomic_updates: replace: Monotoca sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Montia sp - replace: Montia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Montia spp. replace: Montia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -5478,11 +5251,6 @@ taxonomic_updates: replace: Nothofagus sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: NotoRytidosperma sp. - replace: Rytidosperma sp. [NotoRytidosperma sp.; White_2020] - reason: Manual matched to genus for taxon that can't be matched to species (Elizabeth - Wenk, 2022-11-22) - taxonomic_resolution: genus - find: NotoRytidosperma spp. replace: Rytidosperma sp. [NotoRytidosperma spp.; White_2020] reason: Align to genus (E. Wenk, 2023-11-02) @@ -5504,11 +5272,6 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Olearia magniflora x Olearia muelleri - replace: Olearia x [Olearia magniflora x Olearia muelleri; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Olearia pannosa subsp. replace: Olearia pannosa reason: match_06. Automatic alignment with synonymous term among accepted canonical @@ -5606,11 +5369,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-12) taxonomic_resolution: species -- find: Osteocarpum sp - replace: Osteocarpum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Osteocarpum spp. replace: Osteocarpum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -5765,11 +5523,6 @@ taxonomic_updates: reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Persoonia chamaepeuce x Persoonia confertiflora - replace: Persoonia x [Persoonia chamaepeuce x Persoonia confertiflora; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Persoonia chamaepeuce x confertiflora replace: Persoonia x [Persoonia chamaepeuce x confertiflora; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -5780,22 +5533,11 @@ taxonomic_updates: reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Persoonia levis x Persoonia myrtilloides subsp. myrtilloides - replace: Persoonia x [Persoonia levis x Persoonia myrtilloides subsp. myrtilloides; - White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Persoonia levis x myrtilloides subsp. myrtilloides replace: Persoonia x [Persoonia levis x myrtilloides subsp. myrtilloides; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a genus-level alignment with APC accepted genus (2022-11-10) taxonomic_resolution: genus -- find: Persoonia sericea x Persoonia terminalis - replace: Persoonia x [Persoonia sericea x Persoonia terminalis; White_2020] - reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a - genus-level alignment with APC accepted genus (2022-11-10) - taxonomic_resolution: genus - find: Persoonia sericea x terminalis replace: Persoonia x [Persoonia sericea x terminalis; White_2020] reason: match_11. Rewording hybrid species name not in APC or APNI to indicate a @@ -6205,20 +5947,11 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-10) taxonomic_resolution: species -- find: Prasophyllum sp - replace: Prasophyllum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Prasophyllum sp. Moama replace: Prasophyllum sp. Moama (D.L.Jones 19276) reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Prasophyllum sp. Moama (D.L. Jones 19276) - replace: Prasophyllum sp. Moama (D.L.Jones 19276) - reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) - taxonomic_resolution: species - find: Prasophyllum spp. replace: Prasophyllum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -6467,11 +6200,6 @@ taxonomic_updates: reason: Fuzzy match of taxon name to an APC-accepted canonical name once punctuation and filler words are removed (2023-11-02) taxonomic_resolution: species -- find: Ranunculus sp - replace: Ranunculus sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Ranunculus spp. replace: Ranunculus sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -6494,16 +6222,6 @@ taxonomic_updates: replace: Rhodanthe sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Rhyncharrhena sp. - replace: Vincetoxicum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus -- find: Rhyncharrhena sp. - replace: Vincetoxicum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-23) - taxonomic_resolution: genus - find: Rhyncharrhena spp. replace: Rhyncharrhena sp. [White_2020] reason: Exact match of taxon name ending with `sp.` to an APC genus (2023-11-02) @@ -6688,11 +6406,6 @@ taxonomic_updates: replace: Rytidosperma setaceum reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Rytidosperma sp - replace: Rytidosperma sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Rytidosperma sp. aff. setaceum replace: Rytidosperma sp. [Rytidosperma sp. aff. setaceum; White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -6833,7 +6546,7 @@ taxonomic_updates: reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus - find: Sclerochlamys spp. - replace: Sclerolaena sp. [Sclerochlamys; White_2020] + replace: Sclerolaena sp. [Sclerochlamys; White_2020] reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level alignment with `APNI` name (2022-11-10) taxonomic_resolution: genus @@ -6885,20 +6598,10 @@ taxonomic_updates: reason: match_04. Rewording taxon where `/` indicates uncertain species identification to align with `APC accepted` genus (2022-11-10) taxonomic_resolution: genus -- find: Sclerolaena sp - replace: Sclerolaena sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Sclerolaena spp. replace: Sclerolaena sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Sclerostegia sp. [White_2020] - replace: Tecticornia sp. [Sclerostegia sp. ; White_2020] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-23) - taxonomic_resolution: genus - find: Sclerostegia spp. replace: Sclerostegia sp. [White_2020] reason: Manual match to genus for taxon that can't be match to species (Elizabeth @@ -7074,11 +6777,6 @@ taxonomic_updates: replace: Solenogyne sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Sorghum sp - replace: Sorghum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Sowerbaea spp. replace: Sowerbaea sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -7162,11 +6860,6 @@ taxonomic_updates: reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level alignment with `APNI` name (2022-11-10) taxonomic_resolution: genus -- find: Stemodia sp - replace: Stemodia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Stemodia spp. replace: Stemodia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -7283,11 +6976,6 @@ taxonomic_updates: replace: Synaptantha sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Syzygium sp - replace: Syzygium sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Syzygium spp. replace: Syzygium sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -7315,11 +7003,6 @@ taxonomic_updates: reason: match_06. Automatic alignment with synonymous term among accepted canonical names in APC (2022-11-22) taxonomic_resolution: species -- find: Tecticornia sp - replace: Tecticornia sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Tecticornia spp. replace: Tecticornia sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -7678,11 +7361,6 @@ taxonomic_updates: reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level alignment with `APC known` name (2022-11-10) taxonomic_resolution: genus -- find: Tripogonella sp - replace: Tripogonella sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Triptilodicus pygmaeus replace: Triptilodiscus pygmaeus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -7715,11 +7393,6 @@ taxonomic_updates: replace: Trymalium sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus -- find: Tylophora sp. - replace: Vincetoxicum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC known` name (2022-11-10) - taxonomic_resolution: genus - find: Tylophora spp. replace: Vincetoxicum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -7769,11 +7442,6 @@ taxonomic_updates: reason: match_14. Automatic alignment with species-level canonical name in APC accepted when notes are ignored (2022-11-10) taxonomic_resolution: species -- find: Veronica sp - replace: Veronica sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Veronica sp. 1 (aff. notabilis) replace: Veronica sp. [Veronica sp. 1 (aff. notabilis); White_2020] reason: match_09. Rewording taxon with term `affinis` preceding species epithet @@ -7903,7 +7571,7 @@ taxonomic_updates: reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) taxonomic_resolution: genus - find: X Calassodia sp. nov. (Cyanicula caerulea hybrid) - replace: x Calassodia [X Calassodia sp. nov. (Cyanicula caerulea hybrid); White_2020] + replace: x Phelodia sp. [X Calassodia sp. nov. (Cyanicula caerulea hybrid); White_2020] reason: Manual match to genus for taxon that can't be match to species (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: genus @@ -7959,11 +7627,6 @@ taxonomic_updates: replace: Helichrysum leucopsideum reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species -- find: Xerochrysum sp - replace: Xerochrysum sp. [White_2020] - reason: match_01. Rewording taxon with ending with `sp.` to indicate a genus-level - alignment with `APC accepted` name (2022-11-10) - taxonomic_resolution: genus - find: Xerochrysum spp. replace: Xerochrysum sp. [White_2020] reason: Adding dataset_id to genus-level taxon names. (E. Wenk, 2023-06-16) @@ -8048,7 +7711,7 @@ exclude_observations: find: Cymbopogon excavatus reason: non-native (Africa) - variable: taxon_name - find: J, j + find: j reason: too little resolution questions: contributor: There are a few species with multiple lifespan categories. In each diff --git a/data/Williams_2012/metadata.yml b/data/Williams_2012/metadata.yml index 27d803eb6..186f41ea8 100644 --- a/data/Williams_2012/metadata.yml +++ b/data/Williams_2012/metadata.yml @@ -22,8 +22,8 @@ dataset: data %>% mutate( fire_time_from_fire_to_fruiting = `Reproductive maturity`, - resprouting_capacity = ifelse(`Post-fire regeneration` %in% c("Fire killed, abundant seedlings", - "Fire killed, abundant seedlings; very occasional coppice from base of stem", + resprouting_capacity = ifelse(`Post-fire regeneration` %in% c("Fire killed, abundant seedlings", + "Fire killed, abundant seedlings; very occasional coppice from base of stem", "Only seedlings observed"), "fire_killed", "resprouts") ) ' @@ -229,9 +229,6 @@ substitutions: - trait_name: bud_bank_location find: Fire killed, abundant seedlings; very occasional coppice from base of stem replace: basal_stem_buds -- trait_name: bud_bank_location - find: Coppice from base of stem; Epicormic resprout; & seedlings - replace: basal_stem_buds epicormic_buds - trait_name: bud_bank_location find: Coppice from base of stem replace: basal_stem_buds diff --git a/data/Wright_2000/metadata.yml b/data/Wright_2000/metadata.yml index 31d3ba029..ef5737bc4 100644 --- a/data/Wright_2000/metadata.yml +++ b/data/Wright_2000/metadata.yml @@ -37,10 +37,10 @@ dataset: mutate(row_number = row_number()) %>% filter(!row_number %in% c(849, 1204, 1292, 1355)) %>% mutate( - fruit_fleshiness = `fruit type`, + fruit_fleshiness = `fruit type`, fruit_dehiscence = `fruit type`, dispersal_appendage = NA - ) %>% + ) %>% move_values_to_new_trait( "fruit type", "dispersal_appendage", c("nut/winged","capsule/sds (wing)","capsule/sd, aril"), @@ -976,7 +976,7 @@ taxonomic_updates: reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species - find: Elaeocarpus carnea - replace: Elaeocarpus sp [Elaeocarpus carnea; Wright_2000] + replace: Elaeocarpus sp. [Elaeocarpus carnea; Wright_2000] reason: Manual match to genus for taxon that can't be match to species (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: genus @@ -984,11 +984,6 @@ taxonomic_updates: replace: Elaeocarpus sericopetalus reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Elaeocarpus sp [Elaeocarpus carnea; Wright_2000] - replace: Elaeocarpus sp. [Elaeocarpus carnea; Wright_2000] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-22) - taxonomic_resolution: genus - find: Elatine gratiolioides replace: Elatine gratioloides reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1026,11 +1021,6 @@ taxonomic_updates: replace: Erythrophleum chlorostachys reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Eucalyptus x vitrea - replace: Eucalyptus x vitrea - reason: match_06. Automatic alignment with synonymous term among known canonical - names APC (2022-11-10) - taxonomic_resolution: species - find: Eucalyptus balladeniensis replace: Eucalyptus balladoniensis reason: match_07_fuzzy. Fuzzy alignment with accepted canonical name in APC (2022-11-10) @@ -1512,11 +1502,6 @@ taxonomic_updates: replace: Randia sessilis reason: Manual alignment with canonical species name in APC (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: species -- find: Rauwenhoffia sp. [Rauwenhoffia tetraphyllus] - replace: Uvaria sp. [Rauwenhoffia sp. [Rauwenhoffia tetraphyllus]; Wright_2000] - reason: match_20. Rewording name to be recognised as genus rank, with genus known - by APC (2022-11-10) - taxonomic_resolution: genus - find: Rauwenhoffia tetraphyllus replace: Uvaria sp. [Rauwenhoffia tetraphyllus; Wright_2000] reason: match_20. Rewording name to be recognised as genus rank, with genus known @@ -1779,7 +1764,7 @@ exclude_observations: Brachychiton carruthersii reason: non-native (E Wenk, 2020.06.18) - variable: taxon_name - find: Mitrophora sp. + find: Mitrophora sp reason: fungus (E Wenk, 2020.06.18) - variable: taxon_name find: Casuarina oligodon diff --git a/data/Zanne_2009/metadata.yml b/data/Zanne_2009/metadata.yml index b067e602f..2a0252359 100644 --- a/data/Zanne_2009/metadata.yml +++ b/data/Zanne_2009/metadata.yml @@ -175,11 +175,6 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Diospyros indet - replace: Diospyros sp. [Diospyros indet; Zanne_2009] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Endiandra indet replace: Endiandra sp. [Endiandra indet; Zanne_2009] reason: match_20. Rewording name to be recognised as genus rank, with genus accepted @@ -200,30 +195,15 @@ taxonomic_updates: reason: match_20. Rewording name to be recognised as genus rank, with genus accepted by APC (2022-11-10) taxonomic_resolution: genus -- find: Haplostichanthus indet - replace: Haplostichanthus sp. [Haplostichanthus indet; Zanne_2009] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Litsea domarensis replace: Litsea domariensis reason: match_07_fuzzy. Fuzzy alignment with known canonical name in APC (2022-11-10) taxonomic_resolution: species -- find: Psychotria indet - replace: Psychotria sp. [Psychotria indet; Zanne_2009] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Tristiropsis subangula replace: Tristiropsis sp. [Tristiropsis subangula; Zanne_2009] reason: Manual match to genus for taxon that can't be match to species (Elizabeth Wenk, 2022-11-12) taxonomic_resolution: genus -- find: Wilkiea indet - replace: Wilkiea sp. [Wilkiea indet; Zanne_2009] - reason: match_20. Rewording name to be recognised as genus rank, with genus accepted - by APC (2022-11-10) - taxonomic_resolution: genus - find: Zanthoxylum indet replace: Zanthoxylum sp. [Zanthoxylum indet; Zanne_2009] reason: match_20. Rewording name to be recognised as genus rank, with genus accepted diff --git a/data/eFLOWER_2021/metadata.yml b/data/eFLOWER_2021/metadata.yml index 9601c6c51..d99c79446 100644 --- a/data/eFLOWER_2021/metadata.yml +++ b/data/eFLOWER_2021/metadata.yml @@ -62,7 +62,7 @@ contributors: dataset: data_is_long_format: yes custom_R_code: ' - data %>% + data %>% mutate( Date = Date %>% dmy(), ref_year = stringr::str_extract(FullRef, "(?