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ms_info_ant.py
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#!/usr/bin/env python
import sys
import os
import numpy
import math
from casacore.tables import *
from MSUtils.msutils import STOKES_TYPES
import argparse
import matplotlib.pyplot as plt
from astropy.coordinates import Angle
from astropy import units as u
from astropy.constants import c, R_earth
from astropy import constants as const
from astropy.time import Time
def str2bool(v):
if isinstance(v, bool):
return v
if v.lower() in ('yes', 'true', 't', 'y', '1'):
return True
elif v.lower() in ('no', 'false', 'f', 'n', '0'):
return False
else:
raise argparse.ArgumentTypeError('Boolean value expected.')
parser = argparse.ArgumentParser(description='Quick look at a Measurement Set, Plot of antenna positions, return the antenna positions in degrees (Lon, Lat)', epilog="Output:list info of MS and plot antenna positions, and return the antenna positions in degrees (Lon, Lat)", formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument("MS_file", help='input MeasurmentSet file')
parser.add_argument('-antplot', "--antplot", type=str2bool, nargs='?',
const=True, default=False,
help="Print & plot antenna location.")
args = parser.parse_args()
parser.print_help()
antplot=args.antplot
# Disable
def blockPrint():
sys.stdout = open(os.devnull, 'w')
# Restore
def enablePrint():
sys.stdout = sys.__stdout__
def gi(message):
print ('\033[92m'+message+'\033[0m')
def ri(message):
print ('\033[91m'+message+'\033[0m')
def rad2deg(xx):
# convert radians to degrees
return 180.0*xx/numpy.pi
# Get the Measurement Set from the command line arguments
myms=args.MS_file.rstrip('/')
fldtab = table(myms+'/FIELD',ack=False)
# Get the NAME column
names = fldtab.getcol('NAME')
ids = fldtab.getcol('SOURCE_ID')
# Get the PHASE_DIR column
dirs = fldtab.getcol('PHASE_DIR')
fldtab.done()
obstab = table(myms+'/OBSERVATION',ack=False)
obsname = obstab.getcol('OBSERVER')
telname = obstab.getcol('TELESCOPE_NAME')
proj = obstab.getcol('PROJECT')
obstab.done()
spwtab = table(myms+'/SPECTRAL_WINDOW',ack=False)
nspw = len(spwtab)
spwfreqs = spwtab.getcol('REF_FREQUENCY')
chanwidth = spwtab.getcol('CHAN_WIDTH')[0][0]
nchans = spwtab.getcol('NUM_CHAN')
spwtab.done()
anttab = table(myms+'/ANTENNA',ack=False)
nant = len(anttab)
antpos = anttab.getcol('POSITION')
antnames = anttab.getcol('NAME')
anttab.done()
poltab = table(myms+'/POLARIZATION',ack=False)
num_corr = poltab.getcol('NUM_CORR')
corr_labels = [STOKES_TYPES[corr] for corr in poltab.getcol('CORR_TYPE', 0, 1).ravel()]
poltab.done()
maintab = table(myms,ack=False)
usedants = numpy.unique(maintab.getcol('ANTENNA1'))
meanexp = round(numpy.mean(maintab.getcol('EXPOSURE')),2)
times = maintab.getcol('TIME')
t0 = times[0]
t1 = times[-1]
length = round((t1 - t0),0)
mjd=t0/86400
t = Time(mjd, format='mjd')
st_time=t.iso
maintab.done()
# Loop over the number of rows
print ('')
gi(' '+myms)
print (' Observer: '+ ''.join(obsname))
print (' Telescope: '+ ''.join(telname))
print (' Project: '+ ''.join(proj))
print (' Beginning of Observation: '+str(st_time)+' (ISO) -- '+str(mjd)+' (MJD) ')
print (' Observation length: '+str(length)+'s ('+str(round((length/3600.0),2))+' h)')
print (' Mean integration time: '+str(meanexp)+' s')
#print (' Number of correlation ')
#print (' polarization products: '+str(num_corr)+'')
print (' Correlation products: '+str(list(corr_labels)))
print ('')
#gi(' '+myms+'/FIELD')
gi(' ROW ID NAME RA DEC')
for i in range(0,len(names)):
# MS uses SI units, so directions are in radians
ra_rad = dirs[i][0][0]
dec_rad = dirs[i][0][1]
ra_deg = Angle(rad2deg(ra_rad), unit=u.deg)
dec_deg = Angle(rad2deg(dec_rad), unit=u.deg)
dec_dms=dec_deg.to_string(unit=u.degree, sep=('d', 'm', 's'))
ra_hms=ra_deg.to_string(unit=u.hour)
# Print out the
print (' %-6s%-6s%-14s%-14s%-14s' % (i,str(ids[i]),names[i],ra_hms,dec_dms))
print ('')
#gi(' '+myms+'/SPECTRAL_WINDOW')
gi(' ROW CHANS WIDTH[MHz] REF_FREQ[MHz]')
for i in range(0,nspw):
print (' %-6s%-14s%-20s%-14s' % (i,str(nchans[i]),str(chanwidth/1e6),str(spwfreqs[i]/1e6)))
print ('')
#gi(' '+myms+'/ANTENNA')
gi(' ROW NAME POSITION ')
for i in range(0,nant):
if i in usedants:
print (' %-6s%-14s%-14s' % (i,(antnames[i]),str(antpos[i])))
else:
ri(' %-6s%-14s%-14s' % (i,(antnames[i]),str(antpos[i])))
print ('')
#blockPrint()
plt.rcParams["figure.figsize"] = (12,8)
x = antpos[:,1]
y = antpos[:,0]
z = antpos[:,2]
R = 6378100 #earth-radius
if antplot==True:
print (' '*2, 'ANTENNA NAME' +' '*8+ 'LONG (DEG)' + ' '*10+ 'LAT (DEG)')
plt.plot(x, y, '1', markersize=25)
plt.ticklabel_format(useOffset=False, style='plain')
plt.xlabel('X (meters)', fontsize = 20)
plt.ylabel('Y (meters)', fontsize = 20)
plt.tick_params(axis ='both',which='both',direction = 'in',labelsize=16)
plt.title(myms,fontsize = 10)
for i, txt in enumerate(antnames):
plt.annotate(txt, (x[i]+5, y[i]+5), ha='center', color='black', fontsize='8')
lat = math.asin(z[i] / R)
lon = math.atan2(x[i], y[i])
lat_deg=180.0*lat/numpy.pi
lon_deg=180.0*lon/numpy.pi
#enablePrint()
print ( ' '*5, antnames[i], ' '*8, lon_deg, ' '*8, lat_deg)
#plt.plot(lon_deg, lat_deg, marker='1',markersize=25, transform=ccrs.Geodetic())
#plt.show()
plt.savefig(myms+'_plotant.png')